MD00G1038900.v1.1

Exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0006651
Physical Location & Seq
Reverse (-)
6737389 .. 6746601
9213 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1038900.v1.1.491

Sequence Viewer

Length: 2640 bp
ATGGCGAAATCGAGCGCAGACGACCAGGAGCTGCGGCGGGCCTGCGAGGCCGCCATCGAAAGCACCAAGCAGAGCGTCGTTGTGTCCATCCGCGTGGCCAAGAGCCGTGGGATCTGGGGCAAGACCCACAAGCTCGGCCGCGACATGGCCAAACCTAGGGTTCTCGCACTTTCCGTAAAAACCAAAGGCCAGAGGACTCAAGCCTTTCTCCGAGTCTTAAAATATTCTACTGGAGGAGTCCTTGAGCCTGCAAAGTTATACAAACTAAAGCATCTTTCAAAGGTGGAGGTTTTAACAAACGACCCTAGTGGGTGTACTTTTACTCTGGGTTTTGATAATCTTAGGAGTCAAAGTGTTGCTCCTCCTCAATGGACCATGCGAAATATTGATGACAGGAACCGGCTTTTACTTTGTATTTTAAACATATGCAAAGATGCACTGGGTCATCTTCCTAAAGTTGTTGGTATAGATGTGGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCGGCAGTCACTAGTCAAGTAAAGGAGCAAATGGGACCTGCTGCATCAACAGTAACTGAAAGTGACTTGAAAGTAACTGTTGAAAAAGAACTTGTCTCCCAAGCTGAGGAAGAGGACATGGAGGCACTTTTGGGAACTTATGTCATGGGTATTGGTGAAGCAGAAGCATTTTCTGAAAGGTTGAAGAGGGAGCTTCTGGCTTTGGAAGCAGCAAATGTGCATGCCATTTTGGAAAGTGAACCTTTGATAGACGAGGTATTGCAAGGGCTTGAGGCAGCAACGAATTGTGTCGATGACATGGACGAATGGTTAGGAATCTTTAATGTGAAACTCAGACACATGAGAGAAGACATTGAATCGATAGAAACCCGCAATAACAAGTTGGAGATGCAATCTGTAAATAATAGGGCACTCATTTATGAACTCGATAAGCTCCTTCTAGGTTTGCGTGTTCCTTCTCAGTATGCAGCATGCTTGACAGGAGGTTCATTCGATGAAGCACGTATGCTTCAAAACATAGAAGCATGTGAGTGGTTGGCTGGTGCTTTACGCAGTCTTGAAGTACCTAACTTGGATCCCATCTATGCAAATATGCGGGCTGTTAAAGAGAAGCGAGCAGAACTTGAAAAATTGAAATCTACATTTGTCAGAAGAGCTTCTGAGTTCTTGCGAAATTACTTTGCTAGTTTGGTGGATTTTATGATAAGCGACAAGAGCTACTTTTCTCAGCGGGGGCAGCTGAAAAGGCCTGATCATGCTGATCTACGGTACAAATGCAGAACGTATGCTCGCCTTCTGCAACATTTGAAGAGTCTTGATAACAATTGCATGGGCACTTTGAGGAAGGCATATTGTAGCTCCCTCAACTTGCTTCTTCGTCGTGAGGCTCGTGAATTTGCAAATGAGCTTCGTGCTAGTACAAAGGCATCAAGAAATCCAACCGTCTGGCTTGAAGGGTCTGGTCAAAATGCGAATGCTGCAGACACTTCTACTGTTTCTGAAGCTTATTCCAAGATGCTTACAATTTTTATCCCACTCCTTGTAGATGAGAGTTCTTTCTTTGCGCACTTTATGTGCTTTGAAGTTCCAGCACTTGTTCCTCCAGGGGGTACTGCTAATGGAGATAAATATGATGACACCAATGACGATGATTTGGGAATCATGGACATTGATGACAATGACAGCAAAGCTGGCAAAAGTTCAGGAGAGCTTGCAGCATTAAATGAATCTCTTCAGGACTTACTTGATGGAATCCAGGAAGACTTCTATGCCGTTGTGGACTGGGCATACAAGATTGATCCCTTACGCTGCATATCAATGCATGGGATTACAGAGCGCTATCTTTCTGGTCAAAAAGCTGATGCAGCAGGTTTTGTACGTCTCTTGCTTGGTGATCTGGAGTCGAGAGTTTCTATGCAGTTCAGTCGCTTTGTTGATGAAGCTTGCCACCAGATTGAAAGAAACGAGCGCAACGTTAGACAAGTGGGTGTCTTATCATACATCCCAAGATTTGCTACTCTGGCAACACGAATGGAGCAGTACATCCAGGGACAATCTAGGGATTTGGTTGATCAAGCGTACACAAAATTTGTTAGCATCATGTTTGCGACTTTGGAGAAAATTGCACAAACAGAGCCAAAGTATTCTGATCTTTTTCTATTAGAGAACTATGCTGCGTTTCAGAATAGTTTGTATGACCTAGCAAATGTTGTGCCCACCTTGGCCAAATTTTATCACCAGGCAAGTGAAGCTTATGAACAAGCTTGCACACGCCATATCAGCATGATCATATACAATCAATTTGAACGGCTTTTCCAGTTTGCTCGAAGAATAGAGGATTTGATGTATACAATCGCACCAGAAGAGATCCCCTTCCAGCTAGGGTTGTCAAAGATGGATCTGCGGAAGGTGATAAAATCAAGTTTATCCGGGCTTGACAAGTCCATCGCTGGAATGTACAAGAAGTTGCAGAAAAACATGACTTCAGAAGAACTGCTGCCTTCTTTATGGGATAAATGCAAGAAGGAGTTCCTTGACAAGTATGAAGGTTTTGCGCAACTCGTCGCCAAGATTTACCCGACAGAGACCATTCTTAGCGTAACAGAAATGAGAGACCTTTTGGCTTCCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sec3-PIP2_bind Sec3_C

Protein Analysis

880

Amino Acids

99.21

Weight (kDa)

5.63

Isoelectric Point (pI)

45.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec3-PIP2_bind PF15277 50 - 144 3.6e-15 Exocyst complex component SEC3 N-terminal PIP2 binding PH
Sec3_CC PF09763 223 - 344 1.7e-24 Exocyst complex component Sec3, coiled-coil
Vps52_CC PF04129 255 - 392 1.2e-07 Vps52/Sac2 family, coiled-coil
Sec3_C-term PF20654 574 - 862 6.3e-28 Exocyst complex component Sec3, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 1572, 2562
Acc36I ACCTGC 2 cut(s) 553, 1865
AccI GTMKAC 1 cut(s) 2354
AccII CGCG 2 cut(s) 93, 141
AciI CCGC 9 cut(s) 34, 37, 51, 91, 139, 877, 1102, 1237, 2410
AclI AACGTT 1 cut(s) 1980
AclWI GGATC 6 cut(s) 119, 1076, 1089, 1799, 2368, 2412
AcoI YGGCCR 4 cut(s) 96, 136, 147, 2229
AcsI RAATTY 3 cut(s) 1400, 2093, 2234
AcuI CTGAAG 3 cut(s) 1527, 1724, 2475
AfaI GTAC 9 cut(s) 316, 1071, 1277, 1426, 1618, 1884, 2048, 2087, 2465
AfeI AGCGCT 1 cut(s) 1844
AfiI CCNNNNNNNGG 4 cut(s) 145, 156, 613, 1613
AhlI ACTAGT 1 cut(s) 518
AjnI CCWGG 5 cut(s) 24, 1609, 1761, 2052, 2244
AloI GAACNNNNNNTCC 2 cut(s) 2304, 2336
Alw26I GTCTC 4 cut(s) 607, 1892, 2585, 2613
AlwI GGATC 6 cut(s) 119, 1076, 1089, 1799, 2368, 2412
AlwNI CAGNNNCTG 2 cut(s) 31, 563
Aor51HI AGCGCT 1 cut(s) 1844
AoxI GGCC 8 cut(s) 39, 48, 96, 136, 147, 187, 1253, 2229
ApoI RAATTY 3 cut(s) 1400, 2093, 2234
Asp700I GAANNNNTTC 3 cut(s) 1162, 1737, 2534
AspA2I CCTAGG 1 cut(s) 155
AspLEI GCGC 5 cut(s) 17, 1573, 1845, 1977, 2563
AspS9I GGNCC 3 cut(s) 39, 372, 542
AsuC2I CCSGG 1 cut(s) 2437
AsuHPI GGTGA 4 cut(s) 674, 1910, 2234, 2428
AvaII GGWCC 2 cut(s) 372, 542
AvrII CCTAGG 1 cut(s) 155
BaeGI GKGCMC 3 cut(s) 919, 1343, 2223
BalI TGGCCA 3 cut(s) 98, 149, 2231
BamHI GGATCC 1 cut(s) 1081
BauI CACGAG 1 cut(s) 1395
BbsI GAAGAC 2 cut(s) 861, 1773
BbvCI CCTCAGC 1 cut(s) 612
BccI CCATC 7 cut(s) 62, 95, 475, 1094, 1748, 2395, 2459
BceAI ACGGC 3 cut(s) 90, 1763, 2330
BcgI CGANNNNNNTGC 2 cut(s) 1913, 1947
BciT130I CCWGG 5 cut(s) 26, 1611, 1763, 2054, 2246
BclI TGATCA 3 cut(s) 1258, 2077, 2292
BcnI CCSGG 1 cut(s) 2437
BcoDI GTCTC 4 cut(s) 607, 1892, 2585, 2613
BcuI ACTAGT 1 cut(s) 518
BfaI CTAG 9 cut(s) 156, 306, 519, 947, 1191, 1422, 2064, 2207, 2387
BfmI CTRYAG 1 cut(s) 1485
BfoI RGCGCY 1 cut(s) 1846
BfuAI ACCTGC 2 cut(s) 553, 1865
BglI GCCNNNNNGGC 1 cut(s) 47
BlnI CCTAGG 1 cut(s) 155
Bme1390I CCNGG 6 cut(s) 26, 1611, 1763, 2054, 2246, 2437
Bme18I GGWCC 2 cut(s) 372, 542
BmgT120I GGNCC 3 cut(s) 39, 372, 542
BmiI GGNNCC 3 cut(s) 398, 543, 1083
BmrFI CCNGG 6 cut(s) 26, 1611, 1763, 2054, 2246, 2437
BmrI ACTGGG 2 cut(s) 449, 1798
BmsI GCATC 8 cut(s) 280, 424, 560, 885, 1442, 1512, 1858, 2112
BmuI ACTGGG 2 cut(s) 449, 1798
BpiI GAAGAC 2 cut(s) 861, 1773
BpmI CTGGAG 3 cut(s) 252, 1593, 1925
Bpu10I CCTNAGC 2 cut(s) 495, 612
BpuEI CTTGAG 3 cut(s) 183, 263, 797
BpuMI CCSGG 1 cut(s) 2437
Bsa29I ATCGAT 1 cut(s) 866
BsaAI YACGTR 1 cut(s) 1010
BsaI GGTCTC 2 cut(s) 2585, 2613
BsaJI CCNNGG 5 cut(s) 106, 155, 1610, 2053, 2226
BsaXI ACNNNNNCTCC 2 cut(s) 337, 367
Bsc4I CCNNNNNNNGG 4 cut(s) 145, 156, 613, 1613
Bse118I RCCGGY 2 cut(s) 399, 508
Bse1I ACTGG 4 cut(s) 235, 444, 1793, 2323
BseBI CCWGG 5 cut(s) 26, 1611, 1763, 2054, 2246
BseCI ATCGAT 1 cut(s) 866
BseDI CCNNGG 5 cut(s) 106, 155, 1610, 2053, 2226
BseGI GGATG 3 cut(s) 87, 2007, 2049
BseLI CCNNNNNNNGG 4 cut(s) 145, 156, 613, 1613
BseMII CTCAG 5 cut(s) 603, 853, 980, 1158, 1247
BseNI ACTGG 4 cut(s) 235, 444, 1793, 2323
BseRI GAGGAG 3 cut(s) 249, 351, 354
BseSI GKGCMC 3 cut(s) 919, 1343, 2223
BseX3I CGGCCG 1 cut(s) 136
Bsh1236I CGCG 2 cut(s) 93, 141
Bsh1285I CGRYCG 1 cut(s) 139
BshFI GGCC 8 cut(s) 41, 50, 98, 138, 149, 189, 1255, 2231
BshVI ATCGAT 1 cut(s) 866
BsiEI CGRYCG 1 cut(s) 139
BsiSI CCGG 3 cut(s) 400, 509, 2436
BslFI GGGAC 2 cut(s) 555, 2070
BslI CCNNNNNNNGG 4 cut(s) 145, 156, 613, 1613
BsmAI GTCTC 4 cut(s) 607, 1892, 2585, 2613
BsmBI CGTCTC 1 cut(s) 1892
BsmFI GGGAC 2 cut(s) 555, 2070
BsmI GAATGC 1 cut(s) 1486
BsnI GGCC 8 cut(s) 41, 50, 98, 138, 149, 189, 1255, 2231
Bso31I GGTCTC 2 cut(s) 2585, 2613
Bsp1286I GDGCHC 3 cut(s) 919, 1343, 2223
Bsp1407I TGTACA 1 cut(s) 2463
BspACI CCGC 9 cut(s) 34, 37, 51, 91, 139, 877, 1102, 1237, 2410
BspANI GGCC 8 cut(s) 41, 50, 98, 138, 149, 189, 1255, 2231
BspCNI CTCAG 5 cut(s) 604, 852, 979, 1159, 1246
BspDI ATCGAT 1 cut(s) 866
BspFNI CGCG 2 cut(s) 93, 141
BspLI GGNNCC 3 cut(s) 398, 543, 1083
BspMAI CTGCAG 1 cut(s) 1489
BspMI ACCTGC 2 cut(s) 553, 1865
BspPI GGATC 6 cut(s) 119, 1076, 1089, 1799, 2368, 2412
BspQI GCTCTTC 1 cut(s) 1153
BspTNI GGTCTC 2 cut(s) 2585, 2613
BsrFI RCCGGY 2 cut(s) 399, 508
BsrGI TGTACA 1 cut(s) 2463
BsrI ACTGG 4 cut(s) 235, 444, 1793, 2323
BssAI RCCGGY 2 cut(s) 399, 508
BssECI CCNNGG 5 cut(s) 106, 155, 1610, 2053, 2226
BssNAI GTATAC 1 cut(s) 2355
BssSI CACGAG 1 cut(s) 1395
BssT1I CCWWGG 2 cut(s) 155, 2226
Bst1107I GTATAC 1 cut(s) 2355
Bst2BI CACGAG 1 cut(s) 1395
Bst2UI CCWGG 5 cut(s) 26, 1611, 1763, 2054, 2246
Bst4CI ACNGT 5 cut(s) 559, 586, 1275, 1450, 1501
Bst6I CTCTTC 6 cut(s) 612, 686, 1153, 1310, 1743, 2364
BstAUI TGTACA 1 cut(s) 2463
BstBAI YACGTR 1 cut(s) 1010
BstDEI CTNAG 8 cut(s) 341, 495, 612, 839, 966, 1167, 1233, 2600
BstDSI CCRYGG 1 cut(s) 106
BstF5I GGATG 3 cut(s) 87, 2007, 2049
BstFNI CGCG 2 cut(s) 93, 141
BstH2I RGCGCY 1 cut(s) 1846
BstHHI GCGC 5 cut(s) 17, 1573, 1845, 1977, 2563
BstMAI GTCTC 4 cut(s) 607, 1892, 2585, 2613
BstMCI CGRYCG 1 cut(s) 139
BstNI CCWGG 5 cut(s) 26, 1611, 1763, 2054, 2246
BstNSI RCATGY 3 cut(s) 731, 981, 1035
BstSCI CCNGG 6 cut(s) 24, 1609, 1761, 2052, 2244, 2435
BstSFI CTRYAG 1 cut(s) 1485
BstSLI GKGCMC 3 cut(s) 919, 1343, 2223
BstUI CGCG 2 cut(s) 93, 141
BstV2I GAAGAC 2 cut(s) 861, 1773
BstX2I RGATCY 4 cut(s) 111, 1081, 2373, 2404
BstXI CCANNNNNNTGG 2 cut(s) 94, 1452
BstYI RGATCY 4 cut(s) 111, 1081, 2373, 2404
BstZ17I GTATAC 1 cut(s) 2355
BstZI CGGCCG 1 cut(s) 136
Bsu15I ATCGAT 1 cut(s) 866
BsuRI GGCC 8 cut(s) 41, 50, 98, 138, 149, 189, 1255, 2231
BsuTUI ATCGAT 1 cut(s) 866
BtgI CCRYGG 1 cut(s) 106
BtgZI GCGATG 1 cut(s) 2437
BtsCI GGATG 3 cut(s) 87, 2007, 2049
BtsIMutI CAGTG 1 cut(s) 437
BveI ACCTGC 2 cut(s) 553, 1865
CaiI CAGNNNCTG 2 cut(s) 31, 563
CfoI GCGC 5 cut(s) 17, 1573, 1845, 1977, 2563
Cfr10I RCCGGY 2 cut(s) 399, 508
Cfr13I GGNCC 3 cut(s) 39, 372, 542
ClaI ATCGAT 1 cut(s) 866
CseI GACGC 1 cut(s) 64
Csp6I GTAC 9 cut(s) 315, 1070, 1276, 1425, 1617, 1883, 2047, 2086, 2464
CspCI CAANNNNNGTGG 2 cut(s) 88, 123
CviQI GTAC 9 cut(s) 315, 1070, 1276, 1425, 1617, 1883, 2047, 2086, 2464
DdeI CTNAG 8 cut(s) 341, 495, 612, 839, 966, 1167, 1233, 2600
DraI TTTAAA 1 cut(s) 420
EaeI YGGCCR 4 cut(s) 96, 136, 147, 2229
EagI CGGCCG 1 cut(s) 136
Eam1104I CTCTTC 6 cut(s) 612, 686, 1153, 1310, 1743, 2364
EarI CTCTTC 6 cut(s) 612, 686, 1153, 1310, 1743, 2364
EclXI CGGCCG 1 cut(s) 136
Eco130I CCWWGG 2 cut(s) 155, 2226
Eco147I AGGCCT 1 cut(s) 1255
Eco31I GGTCTC 2 cut(s) 2585, 2613
Eco47I GGWCC 2 cut(s) 372, 542
Eco47III AGCGCT 1 cut(s) 1844
Eco52I CGGCCG 1 cut(s) 136
Eco57I CTGAAG 3 cut(s) 1527, 1724, 2475
EcoO109I RGGNCCY 1 cut(s) 542
EcoRII CCWGG 5 cut(s) 24, 1609, 1761, 2052, 2244
EcoT14I CCWWGG 2 cut(s) 155, 2226
EcoT22I ATGCAT 1 cut(s) 1830
ErhI CCWWGG 2 cut(s) 155, 2226
Esp3I CGTCTC 1 cut(s) 1892
FalI AAGNNNNNCTT 6 cut(s) 733, 765, 1211, 1243, 2242, 2274
FaqI GGGAC 2 cut(s) 555, 2070
FauI CCCGC 4 cut(s) 30, 884, 1095, 1230
FauNDI CATATG 1 cut(s) 425
FbaI TGATCA 3 cut(s) 1258, 2077, 2292
FblI GTMKAC 1 cut(s) 2354
FokI GGATG 3 cut(s) 74, 1994, 2036
FspBI CTAG 9 cut(s) 156, 306, 519, 947, 1191, 1422, 2064, 2207, 2387
FspI TGCGCA 2 cut(s) 1572, 2562
GlaI GCGC 5 cut(s) 16, 1572, 1844, 1976, 2562
GsuI CTGGAG 3 cut(s) 252, 1593, 1925
HaeII RGCGCY 1 cut(s) 1846
HaeIII GGCC 8 cut(s) 41, 50, 98, 138, 149, 189, 1255, 2231
HapII CCGG 3 cut(s) 400, 509, 2436
HgaI GACGC 1 cut(s) 64
HhaI GCGC 5 cut(s) 17, 1573, 1845, 1977, 2563
Hin6I GCGC 5 cut(s) 15, 1571, 1843, 1975, 2561
HinP1I GCGC 5 cut(s) 15, 1571, 1843, 1975, 2561
HindIII AAGCTT 4 cut(s) 1509, 1947, 2256, 2268
HpaII CCGG 3 cut(s) 400, 509, 2436
HphI GGTGA 4 cut(s) 674, 1910, 2234, 2428
Hpy166II GTNNAC 5 cut(s) 315, 746, 1786, 2088, 2355
Hpy188I TCNGA 9 cut(s) 212, 682, 842, 1157, 1168, 1507, 2155, 2190, 2494
Hpy188III TCNNGA 9 cut(s) 1064, 1322, 1388, 1397, 1437, 1710, 1742, 1904, 1911
Hpy8I GTNNAC 5 cut(s) 315, 746, 1786, 2088, 2355
Hpy99I CGWCG 3 cut(s) 80, 1389, 2573
HpyCH4III ACNGT 5 cut(s) 559, 586, 1275, 1450, 1501
HpyCH4IV ACGT 4 cut(s) 1009, 1289, 1885, 1980
HpyF3I CTNAG 8 cut(s) 341, 495, 612, 839, 966, 1167, 1233, 2600
HpySE526I ACGT 4 cut(s) 1009, 1289, 1885, 1980
HspAI GCGC 5 cut(s) 15, 1571, 1843, 1975, 2561
Ksp22I TGATCA 3 cut(s) 1258, 2077, 2292
LguI GCTCTTC 1 cut(s) 1153
LmnI GCTCC 7 cut(s) 28, 364, 532, 697, 945, 1370, 2041
LweI GCATC 8 cut(s) 280, 424, 560, 885, 1442, 1512, 1858, 2112
MaeI CTAG 9 cut(s) 156, 306, 519, 947, 1191, 1422, 2064, 2207, 2387
MaeII ACGT 4 cut(s) 1009, 1289, 1885, 1980
MaeIII GTNAC 5 cut(s) 514, 559, 569, 580, 2605
MfeI CAATTG 1 cut(s) 1330
MflI RGATCY 4 cut(s) 111, 1081, 2373, 2404
MhlI GDGCHC 3 cut(s) 919, 1343, 2223
MlsI TGGCCA 3 cut(s) 98, 149, 2231
MluNI TGGCCA 3 cut(s) 98, 149, 2231
MlyI GAGTC 6 cut(s) 190, 222, 246, 355, 1327, 1916
MmeI TCCRAC 2 cut(s) 870, 1469
Mox20I TGGCCA 3 cut(s) 98, 149, 2231
Mph1103I ATGCAT 1 cut(s) 1830
MroXI GAANNNNTTC 3 cut(s) 1162, 1737, 2534
MscI TGGCCA 3 cut(s) 98, 149, 2231
MseI TTAA 6 cut(s) 218, 293, 419, 828, 1110, 1727
MslI CAYNNNNRTG 3 cut(s) 92, 1036, 1823
Msp20I TGGCCA 3 cut(s) 98, 149, 2231
MspA1I CMGCKG 2 cut(s) 1237, 1246
MspI CCGG 3 cut(s) 400, 509, 2436
MspR9I CCNGG 6 cut(s) 26, 1611, 1763, 2054, 2246, 2437
MunI CAATTG 1 cut(s) 1330
Mva1269I GAATGC 1 cut(s) 1486
MvaI CCWGG 5 cut(s) 26, 1611, 1763, 2054, 2246
MvnI CGCG 2 cut(s) 93, 141
NciI CCSGG 1 cut(s) 2437
NdeI CATATG 1 cut(s) 425
NlaIV GGNNCC 3 cut(s) 398, 543, 1083
NmeAIII GCCGAG 1 cut(s) 114
NmuCI GTSAC 2 cut(s) 514, 569
NsbI TGCGCA 2 cut(s) 1572, 2562
NsiI ATGCAT 1 cut(s) 1830
NspI RCATGY 3 cut(s) 731, 981, 1035
PaeI GCATGC 2 cut(s) 731, 981
PceI AGGCCT 1 cut(s) 1255
PciSI GCTCTTC 1 cut(s) 1153
PcsI WCGNNNNNNNCGW 3 cut(s) 171, 1393, 1977
PctI GAATGC 1 cut(s) 1486
PdmI GAANNNNTTC 3 cut(s) 1162, 1737, 2534
PfeI GAWTC 5 cut(s) 822, 863, 1665, 1733, 1758
PfoI TCCNGGA 1 cut(s) 1761
PleI GAGTC 6 cut(s) 190, 221, 245, 354, 1326, 1915
PpsI GAGTC 6 cut(s) 190, 221, 245, 354, 1326, 1915
Ppu21I YACGTR 1 cut(s) 1010
PpuMI RGGWCCY 1 cut(s) 542
Psp1406I AACGTT 1 cut(s) 1980
Psp5II RGGWCCY 1 cut(s) 542
Psp6I CCWGG 5 cut(s) 24, 1609, 1761, 2052, 2244
PspGI CCWGG 5 cut(s) 24, 1609, 1761, 2052, 2244
PspN4I GGNNCC 3 cut(s) 398, 543, 1083
PspPI GGNCC 3 cut(s) 39, 372, 542
PspPPI RGGWCCY 1 cut(s) 542
PstI CTGCAG 1 cut(s) 1489
PstNI CAGNNNCTG 2 cut(s) 31, 563
PsuI RGATCY 4 cut(s) 111, 1081, 2373, 2404
PvuII CAGCTG 1 cut(s) 1246
RsaI GTAC 9 cut(s) 316, 1071, 1277, 1426, 1618, 1884, 2048, 2087, 2465
RsaNI GTAC 9 cut(s) 315, 1070, 1276, 1425, 1617, 1883, 2047, 2086, 2464
RseI CAYNNNNRTG 3 cut(s) 92, 1036, 1823
SapI GCTCTTC 1 cut(s) 1153
SaqAI TTAA 6 cut(s) 218, 293, 419, 828, 1110, 1727
Sau96I GGNCC 3 cut(s) 39, 372, 542
SchI GAGTC 6 cut(s) 190, 222, 246, 355, 1327, 1916
ScrFI CCNGG 6 cut(s) 26, 1611, 1763, 2054, 2246, 2437
SduI GDGCHC 3 cut(s) 919, 1343, 2223
SfaNI GCATC 8 cut(s) 280, 424, 560, 885, 1442, 1512, 1858, 2112
SfcI CTRYAG 1 cut(s) 1485
SfiI GGCCNNNNNGGCC 1 cut(s) 47
SinI GGWCC 2 cut(s) 372, 542
SmiMI CAYNNNNRTG 3 cut(s) 92, 1036, 1823
SmlI CTYRAG 3 cut(s) 198, 242, 776
SmoI CTYRAG 3 cut(s) 198, 242, 776
SpeI ACTAGT 1 cut(s) 518
SphI GCATGC 2 cut(s) 731, 981
SseBI AGGCCT 1 cut(s) 1255
SsiI CCGC 9 cut(s) 34, 37, 51, 91, 139, 877, 1102, 1237, 2410
SspI AATATT 2 cut(s) 224, 385
SspMI CTAG 9 cut(s) 156, 306, 519, 947, 1191, 1422, 2064, 2207, 2387
StuI AGGCCT 1 cut(s) 1255
StyD4I CCNGG 6 cut(s) 24, 1609, 1761, 2052, 2244, 2435
StyI CCWWGG 2 cut(s) 155, 2226
TaaI ACNGT 5 cut(s) 559, 586, 1275, 1450, 1501
TaiI ACGT 4 cut(s) 1012, 1292, 1888, 1983
TaqI TCGA 8 cut(s) 11, 57, 798, 866, 933, 999, 1910, 2332
TatI WGTACW 4 cut(s) 314, 1424, 2046, 2463
TauI GCSGC 3 cut(s) 37, 53, 141
TfiI GAWTC 5 cut(s) 822, 863, 1665, 1733, 1758
Tru1I TTAA 6 cut(s) 218, 293, 419, 828, 1110, 1727
Tru9I TTAA 6 cut(s) 218, 293, 419, 828, 1110, 1727
TscAI CASTG 1 cut(s) 444
TseFI GTSAC 2 cut(s) 514, 569
Tsp45I GTSAC 2 cut(s) 514, 569
TspDTI ATGAA 7 cut(s) 942, 984, 1017, 1746, 1959, 2277, 2565
TspGWI ACGGA 1 cut(s) 163
TspRI CASTG 1 cut(s) 444
VpaK11BI GGWCC 2 cut(s) 372, 542
XapI RAATTY 3 cut(s) 1400, 2093, 2234
XceI RCATGY 3 cut(s) 731, 981, 1035
XmaJI CCTAGG 1 cut(s) 155
XmiI GTMKAC 1 cut(s) 2354
XmnI GAANNNNTTC 3 cut(s) 1162, 1737, 2534
XspI CTAG 9 cut(s) 156, 306, 519, 947, 1191, 1422, 2064, 2207, 2387
Zsp2I ATGCAT 1 cut(s) 1830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.