Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0006651

Physical Location & Seq

Genomic Coordinates Forward (+)

8895081 .. 8905350

Gene Structure 10270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00167930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGCGAAACATTGATGACAGGAACCGCCTTTTACTATGTATTTTAAACATATGCAAAGATGCACTGGAACAGCTGCCTAAAGTTGTTGGTATAGATGTCGTCGAGATGGCTCTTTGGGCTAAGGAAAATACACCAGCAATTTCTAGTCAAAAAAACCAGCAAGAGGGAGAGGGACCTGCTGCAGCAACAGTGACTGAACGTGACTTGAAAGTAACTGTTGAGAAAGAACTTGTCTCACAAGCCGAGGAAGAGGACATGGAGGCACTTTTGGGAACTTATGTCATGGGTATTGGTGAAGCAGAGGCATTTTCTGAAAGGTTGAAAAGAGAGCTTCTGGCTCTGGAAGCAGCAAATGTGCATGCCATTTTGGAAAGTGAACCTTTGATTGATGAGGTTTTGCAAGGGATTGAATCAGCAACAAATTGTGTTGATGACATGGATGAATGGTTAAGCATCTTCAATGTGAAACTCAGACACATGAGAGAAGACATTGAGTCGATAGAAACCCGCAATAACAAGTTGGAAACGCAATCTGTAAATAATAAAGCACTCATCGAGGAGCTTGACAAGCTTCTTAAAGGTTTGCATGTCCCTACTGAGTATGCAACATGTTTGACTGGAGGTTCATTTGACGAGGCACGTATGCTTCAAAACATAGAAGCATGTGAGTGGTTAGCTGGTGCTCTACGCAGTCTTGAAGTACCCCATTTGGACCCTATCTATGCAAACATGCGGGCTGTTAAAGAGAAGCGGGCAGAACTTGAAAAATTAAAAGCTACATTTGTCAGAAGAGCTTCTGAGTTTTTGCGAAATTACTTTGCCAGTTTGGTGGATTTCATGATAAGTGACAAGAGCTACTTTTCTCAGCGGGGGCAACTGAAAAGGCCTGATCATGCTGATCTACGGTATAAATGCAGGACATATGCTCGCCTTCTGCAACATTTAAAGACTCTTGATAAGAATTGCCTTGGGCCACTGAGAAAAGCATATTGTAGCTCCCTCAACTTACTTCTTCGTCGGGAGGCTCGTGAATTTGCAAATGAGCTTCGTGCTAGTACAAAGGCATCAAAAAATCCAACTGTCTGGCTTGAAGCTTCTACTGGTTCTGGTCAAAATATGAATGCTGCAGACACTTCTACTGTTTCTGAAGCTTATTCCAAGATGCTAACAATTTTTATCCCACTCCTTGTAGATGAGGCAGTCTACAATGTGTCAACTGCAGAGTTCTTTTTCGCACACTTTATGTGCTTTGAAGTTCCTGCACTTGTTCCTCCAGGGGGTACTGCCAATGGAGATAAATCTGAATACGATGATGATGACCCGAATGATGACGATTTGGGAATCATGGACATTGATGACAATGACAGTAAAGCTGGTAGTTTACCCGATTTGCTTTCAGTCTTATGTAAACAAACGGGAGAGCTTGCAGCATTGAATGAATCTCTTCAGGATTTACTAGATGGAATCCAAGTTTGCATGTTCATATTGTCCATCATAGATGTCATCTCAAAGCTCAATCTTCTCTTGCAGAACTTGGGATCCTTATCTCTGGTTTTAGTATGCGATGATTTAGAGTCCACAGATGACCTTTCTAAGGAAGACTTTTATGCTGTGGTGGACTGGGCATACAAGATTGATCCTTTACGCTGCATATCAATGCATGGGATTACAGAGCGTTATCTTTCAGGTCAGAAAGCTGATGCAGCAGGATTTGTGCGTCTCCTGCTGGGCGATCTGGAGTCAAGAGTATCAATGCAATTTAGTCGTTTTGTTGATGAAGCATGCCACCAGATTGAAAGAAATGAGCGCAATGTTAGGCAAATGGGTGTCTTGTCATACATCCCAAGATTTGCAACTCTGGCAACGCGAATGGAGCAGTATATCCAGGGACAATCTAGGGATTTAGTTGATCAAGCATACACAAAATTTGTTAGCATAATGTTTGTGACTTTAGAGAAGATTGCACAAACAGATCCAAAATATTCTGATCTTTTCCTCTTAGAGAACTATGCTGCATTTCAGAATAGTTTGTATGACCTAGCAAATGTTGTTCCTACATTGGCCAAATTTTATCACCAAGCAAGTGAAGCTTATGAACAAGCTTGCACACGCCATATCAGTATGATCATATACGCTATCCCTTTCCAGCTTGGGTTGTCAAAGGTGGATTTGCGGAAGATGTTAAAATATAGTTTATCTGGGCTTGACAAGTCCATCAGTGCAATGTACAAGAAGTTGCAGAAAAACATGACATCAGAAGAATTGCTGCCTTCCTTATGGGATAAATGCAAGAAGGAGTTCCTTGACAAGTATGAAAGTTTTGCTCAACTTGTCAACAAAATCTACCCCACAGAGACCATTCCTACTGTAACAGAGATGAGAGAACTTTTGGCTAACATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec3-PIP2_bind Sec3_C

Protein Analysis

800

Amino Acids

90.43

Weight (kDa)

4.89

Isoelectric Point (pI)

42.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec3_CC	PF09763	100 - 221	3e-27	Exocyst complex component Sec3, coiled-coil
Vps52_CC	PF04129	130 - 269	2.6e-09	Vps52/Sac2 family, coiled-coil
Sec3_C-term	PF20654	534 - 711	7.2e-13	Exocyst complex component Sec3, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006651)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47550 AT1G47550 AT1G47560
fragaria_vesca	FvH4_2g40450 FvH4_2g40450 FvH4_2g40450 FvH4_2g40450
malus_domestica	MD00G1038900.v1.1 MD08G1038000.v1.1
prunus_persica	Prupe.1G385700_v2.0.a1 Prupe.1G385700_v2.0.a1 Prupe.1G385700_v2.0.a1 Prupe.1G385700_v2.0.a1
pyrus_communis	pycom08g03010 pycom15g02940
rosa_chinensis	RchiOBHm_Chr6g0300281
rosa_laevigata	RLG00000011351
rosa_multiflora	Rmu_co8431689.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167930
rosa_rugosa	Rorug06G0294700
rosa_samantha	Rh6AG407200 Rh6BG414800 Rh6CG422100 Rh6DG407800 Rh7BG034300
rosa_wichuraiana	Rw6G035610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	184
AccI	GTMKAC	1 cut(s)	1203
AccII	CGCG	1 cut(s)	1867
AciI	CCGC	6 cut(s)	25, 508, 733, 751, 868, 2173
AclWI	GGATC	4 cut(s)	1533, 1546, 1631, 1967
AcoI	YGGCCR	1 cut(s)	2061
AcsI	RAATTY	3 cut(s)	1031, 1925, 2066
AcuI	CTGAAG	2 cut(s)	1167, 1430
AfaI	GTAC	4 cut(s)	702, 1057, 1282, 2228
AfiI	CCNNNNNNNGG	3 cut(s)	163, 1277, 1594
AflIII	ACRYGT	2 cut(s)	608, 2397
AhdI	GACNNNNNGTC	1 cut(s)	493
AjnI	CCWGG	2 cut(s)	1273, 1884
AloI	GAACNNNNNNTCC	2 cut(s)	1523, 1555
Alw21I	GWGCWC	1 cut(s)	685
Alw26I	GTCTC	3 cut(s)	238, 1724, 2348
AlwI	GGATC	4 cut(s)	1533, 1546, 1631, 1967
AlwNI	CAGNNNCTG	1 cut(s)	194
AoxI	GGCC	3 cut(s)	884, 971, 2061
ApoI	RAATTY	3 cut(s)	1031, 1925, 2066
Asp700I	GAANNNNTTC	3 cut(s)	793, 1443, 2297
AspLEI	GCGC	1 cut(s)	1809
AspS9I	GGNCC	3 cut(s)	173, 712, 971
AsuHPI	GGTGA	2 cut(s)	305, 2066
AvaII	GGWCC	2 cut(s)	173, 712
BalI	TGGCCA	1 cut(s)	2063
BamHI	GGATCC	1 cut(s)	1538
BauI	CACGAG	1 cut(s)	1026
BbsI	GAAGAC	2 cut(s)	492, 1605
Bbv12I	GWGCWC	1 cut(s)	685
BccI	CCATC	4 cut(s)	100, 1454, 1499, 2222
BcgI	CGANNNNNNTGC	2 cut(s)	1745, 1779
BciT130I	CCWGG	2 cut(s)	1275, 1886
BclI	TGATCA	3 cut(s)	889, 1909, 2124
BcoDI	GTCTC	3 cut(s)	238, 1724, 2348
BfaI	CTAG	5 cut(s)	144, 1053, 1457, 1896, 2039
BfmI	CTRYAG	3 cut(s)	180, 1125, 1218
BfuAI	ACCTGC	1 cut(s)	184
Bme1390I	CCNGG	2 cut(s)	1275, 1886
Bme18I	GGWCC	2 cut(s)	173, 712
BmeRI	GACNNNNNGTC	1 cut(s)	493
BmgT120I	GGNCC	3 cut(s)	173, 712, 971
BmiI	GGNNCC	4 cut(s)	23, 174, 714, 1540
BmrFI	CCNGG	2 cut(s)	1275, 1886
BmrI	ACTGGG	1 cut(s)	1630
BmsI	GCATC	5 cut(s)	49, 462, 1073, 1152, 1690
BmuI	ACTGGG	1 cut(s)	1630
BpiI	GAAGAC	2 cut(s)	492, 1605
BpmI	CTGGAG	3 cut(s)	639, 1257, 1757
Bpu10I	CCTNAGC	1 cut(s)	120
BsaAI	YACGTR	1 cut(s)	641
BsaBI	GATNNNNATC	1 cut(s)	1543
BsaI	GGTCTC	1 cut(s)	2348
BsaJI	CCNNGG	4 cut(s)	243, 967, 1274, 1885
Bsc4I	CCNNNNNNNGG	3 cut(s)	163, 1277, 1594
Bse1I	ACTGG	5 cut(s)	69, 622, 822, 1105, 1625
Bse3DI	GCAATG	2 cut(s)	1816, 2229
Bse8I	GATNNNNATC	1 cut(s)	1543
BseBI	CCWGG	2 cut(s)	1275, 1886
BseDI	CCNNGG	4 cut(s)	243, 967, 1274, 1885
BseGI	GGATG	2 cut(s)	445, 1839
BseJI	GATNNNNATC	1 cut(s)	1543
BseLI	CCNNNNNNNGG	3 cut(s)	163, 1277, 1594
BseMI	GCAATG	2 cut(s)	1816, 2229
BseMII	CTCAG	5 cut(s)	484, 588, 789, 878, 968
BseNI	ACTGG	5 cut(s)	69, 622, 822, 1105, 1625
BseRI	GAGGAG	1 cut(s)	572
BseYI	CCCAGC	1 cut(s)	1726
BsgI	GTGCAG	1 cut(s)	1245
Bsh1236I	CGCG	1 cut(s)	1867
BshFI	GGCC	3 cut(s)	886, 973, 2063
BsiHKAI	GWGCWC	1 cut(s)	685
BslFI	GGGAC	3 cut(s)	186, 575, 1902
BslI	CCNNNNNNNGG	3 cut(s)	163, 1277, 1594
BsmAI	GTCTC	3 cut(s)	238, 1724, 2348
BsmBI	CGTCTC	1 cut(s)	1724
BsmFI	GGGAC	3 cut(s)	186, 575, 1902
BsmI	GAATGC	1 cut(s)	1126
BsnI	GGCC	3 cut(s)	886, 973, 2063
Bso31I	GGTCTC	1 cut(s)	2348
Bsp1286I	GDGCHC	1 cut(s)	685
Bsp1407I	TGTACA	1 cut(s)	2226
Bsp143I	GATC	9 cut(s)	889, 898, 1538, 1636, 1732, 1909, 1972, 1987, 2124
BspACI	CCGC	6 cut(s)	25, 508, 733, 751, 868, 2173
BspANI	GGCC	3 cut(s)	886, 973, 2063
BspCNI	CTCAG	5 cut(s)	483, 589, 790, 877, 969
BspFNI	CGCG	1 cut(s)	1867
BspHI	TCATGA	1 cut(s)	837
BspLI	GGNNCC	4 cut(s)	23, 174, 714, 1540
BspMAI	CTGCAG	3 cut(s)	184, 1129, 1222
BspMI	ACCTGC	1 cut(s)	184
BspPI	GGATC	4 cut(s)	1533, 1546, 1631, 1967
BspQI	GCTCTTC	1 cut(s)	784
BspTNI	GGTCTC	1 cut(s)	2348
BsrDI	GCAATG	2 cut(s)	1816, 2229
BsrGI	TGTACA	1 cut(s)	2226
BsrI	ACTGG	5 cut(s)	69, 622, 822, 1105, 1625
BssECI	CCNNGG	4 cut(s)	243, 967, 1274, 1885
BssMI	GATC	9 cut(s)	889, 898, 1538, 1636, 1732, 1909, 1972, 1987, 2124
BssSI	CACGAG	1 cut(s)	1026
BssT1I	CCWWGG	1 cut(s)	967
Bst2BI	CACGAG	1 cut(s)	1026
Bst2UI	CCWGG	2 cut(s)	1275, 1886
Bst4CI	ACNGT	7 cut(s)	190, 217, 906, 1081, 1141, 1367, 2368
Bst6I	CTCTTC	3 cut(s)	243, 784, 1449
BstAUI	TGTACA	1 cut(s)	2226
BstBAI	YACGTR	1 cut(s)	641
BstC8I	GCNNGC	7 cut(s)	360, 735, 753, 928, 1425, 1783, 2104
BstDEI	CTNAG	8 cut(s)	120, 470, 597, 798, 864, 977, 1593, 1999
BstENI	CCTNNNNNAGG	1 cut(s)	1592
BstF5I	GGATG	2 cut(s)	445, 1839
BstFNI	CGCG	1 cut(s)	1867
BstHHI	GCGC	1 cut(s)	1809
BstKTI	GATC	9 cut(s)	892, 901, 1541, 1639, 1735, 1912, 1975, 1990, 2127
BstMAI	GTCTC	3 cut(s)	238, 1724, 2348
BstMBI	GATC	9 cut(s)	889, 898, 1538, 1636, 1732, 1909, 1972, 1987, 2124
BstMWI	GCNNNNNNNGC	8 cut(s)	116, 344, 568, 1703, 1723, 1859, 1873, 2087
BstNI	CCWGG	2 cut(s)	1275, 1886
BstNSI	RCATGY	8 cut(s)	362, 590, 612, 666, 733, 1480, 1785, 2401
BstSCI	CCNGG	2 cut(s)	1273, 1884
BstSFI	CTRYAG	3 cut(s)	180, 1125, 1218
BstUI	CGCG	1 cut(s)	1867
BstV2I	GAAGAC	2 cut(s)	492, 1605
BstX2I	RGATCY	2 cut(s)	1538, 1972
BstXI	CCANNNNNNTGG	2 cut(s)	829, 1083
BstYI	RGATCY	2 cut(s)	1538, 1972
BsuRI	GGCC	3 cut(s)	886, 973, 2063
BtgZI	GCGATG	1 cut(s)	1578
BtsCI	GGATG	2 cut(s)	445, 1839
BtsIMutI	CAGTG	4 cut(s)	62, 195, 974, 2224
BveI	ACCTGC	1 cut(s)	184
Cac8I	GCNNGC	7 cut(s)	360, 735, 753, 928, 1425, 1783, 2104
CaiI	CAGNNNCTG	1 cut(s)	194
CciI	TCATGA	1 cut(s)	837
CfoI	GCGC	1 cut(s)	1809
Cfr13I	GGNCC	3 cut(s)	173, 712, 971
CseI	GACGC	1 cut(s)	1706
Csp6I	GTAC	4 cut(s)	701, 1056, 1281, 2227
CviQI	GTAC	4 cut(s)	701, 1056, 1281, 2227
DdeI	CTNAG	8 cut(s)	120, 470, 597, 798, 864, 977, 1593, 1999
DpnI	GATC	9 cut(s)	891, 900, 1540, 1638, 1734, 1911, 1974, 1989, 2126
DpnII	GATC	9 cut(s)	889, 898, 1538, 1636, 1732, 1909, 1972, 1987, 2124
DraI	TTTAAA	2 cut(s)	45, 945
DriI	GACNNNNNGTC	1 cut(s)	493
EaeI	YGGCCR	1 cut(s)	2061
Eam1104I	CTCTTC	3 cut(s)	243, 784, 1449
Eam1105I	GACNNNNNGTC	1 cut(s)	493
EarI	CTCTTC	3 cut(s)	243, 784, 1449
Eco130I	CCWWGG	1 cut(s)	967
Eco147I	AGGCCT	1 cut(s)	886
Eco31I	GGTCTC	1 cut(s)	2348
Eco47I	GGWCC	2 cut(s)	173, 712
Eco57I	CTGAAG	2 cut(s)	1167, 1430
EcoNI	CCTNNNNNAGG	1 cut(s)	1592
EcoO109I	RGGNCCY	1 cut(s)	173
EcoRII	CCWGG	2 cut(s)	1273, 1884
EcoT14I	CCWWGG	1 cut(s)	967
EcoT22I	ATGCAT	1 cut(s)	1662
ErhI	CCWWGG	1 cut(s)	967
Esp3I	CGTCTC	1 cut(s)	1724
FalI	AAGNNNNNCTT	8 cut(s)	364, 396, 842, 874, 1586, 1618, 2074, 2106
FaqI	GGGAC	3 cut(s)	186, 575, 1902
FauI	CCCGC	4 cut(s)	515, 726, 744, 861
FauNDI	CATATG	2 cut(s)	50, 922
FbaI	TGATCA	3 cut(s)	889, 1909, 2124
FblI	GTMKAC	1 cut(s)	1203
FokI	GGATG	2 cut(s)	452, 1826
FspBI	CTAG	5 cut(s)	144, 1053, 1457, 1896, 2039
GlaI	GCGC	1 cut(s)	1808
GsaI	CCCAGC	1 cut(s)	1730
GsuI	CTGGAG	3 cut(s)	639, 1257, 1757
HaeIII	GGCC	3 cut(s)	886, 973, 2063
HgaI	GACGC	1 cut(s)	1706
HhaI	GCGC	1 cut(s)	1809
Hin6I	GCGC	1 cut(s)	1807
HinP1I	GCGC	1 cut(s)	1807
HincII	GTYRAC	2 cut(s)	1215, 2335
HindII	GTYRAC	2 cut(s)	1215, 2335
HindIII	AAGCTT	5 cut(s)	569, 1092, 1149, 2088, 2100
HinfI	GANTC	8 cut(s)	410, 494, 949, 1341, 1439, 1464, 1574, 1739
HphI	GGTGA	2 cut(s)	305, 2066
Hpy166II	GTNNAC	8 cut(s)	377, 1204, 1215, 1382, 1409, 1578, 1618, 2335
Hpy8I	GTNNAC	8 cut(s)	377, 1204, 1215, 1382, 1409, 1578, 1618, 2335
Hpy99I	CGWCG	2 cut(s)	104, 1020
HpyAV	CCTTC	3 cut(s)	941, 2280, 2287
HpyCH4III	ACNGT	7 cut(s)	190, 217, 906, 1081, 1141, 1367, 2368
HpyCH4IV	ACGT	2 cut(s)	199, 640
HpyF10VI	GCNNNNNNNGC	8 cut(s)	116, 344, 568, 1703, 1723, 1859, 1873, 2087
HpyF3I	CTNAG	8 cut(s)	120, 470, 597, 798, 864, 977, 1593, 1999
HpySE526I	ACGT	2 cut(s)	199, 640
HspAI	GCGC	1 cut(s)	1807
Ksp22I	TGATCA	3 cut(s)	889, 1909, 2124
Kzo9I	GATC	9 cut(s)	889, 898, 1538, 1636, 1732, 1909, 1972, 1987, 2124
LguI	GCTCTTC	1 cut(s)	784
LmnI	GCTCC	3 cut(s)	559, 1001, 1873
LweI	GCATC	5 cut(s)	49, 462, 1073, 1152, 1690
MaeI	CTAG	5 cut(s)	144, 1053, 1457, 1896, 2039
MaeII	ACGT	2 cut(s)	199, 640
MaeIII	GTNAC	6 cut(s)	190, 200, 211, 845, 1945, 2368
MalI	GATC	9 cut(s)	891, 900, 1540, 1638, 1734, 1911, 1974, 1989, 2126
MboI	GATC	9 cut(s)	889, 898, 1538, 1636, 1732, 1909, 1972, 1987, 2124
MflI	RGATCY	2 cut(s)	1538, 1972
MhlI	GDGCHC	1 cut(s)	685
MlsI	TGGCCA	1 cut(s)	2063
MluNI	TGGCCA	1 cut(s)	2063
MlyI	GAGTC	4 cut(s)	503, 943, 1583, 1748
MmeI	TCCRAC	2 cut(s)	501, 1100
Mox20I	TGGCCA	1 cut(s)	2063
Mph1103I	ATGCAT	1 cut(s)	1662
MroXI	GAANNNNTTC	3 cut(s)	793, 1443, 2297
MscI	TGGCCA	1 cut(s)	2063
MseI	TTAA	7 cut(s)	44, 449, 576, 741, 770, 944, 2183
MslI	CAYNNNNRTG	2 cut(s)	667, 1655
Msp20I	TGGCCA	1 cut(s)	2063
MspA1I	CMGCKG	2 cut(s)	73, 868
MspR9I	CCNGG	2 cut(s)	1275, 1886
Mva1269I	GAATGC	1 cut(s)	1126
MvaI	CCWGG	2 cut(s)	1275, 1886
MvnI	CGCG	1 cut(s)	1867
MwoI	GCNNNNNNNGC	8 cut(s)	116, 344, 568, 1703, 1723, 1859, 1873, 2087
NdeI	CATATG	2 cut(s)	50, 922
NdeII	GATC	9 cut(s)	889, 898, 1538, 1636, 1732, 1909, 1972, 1987, 2124
NlaIV	GGNNCC	4 cut(s)	23, 174, 714, 1540
NmeAIII	GCCGAG	1 cut(s)	268
NmuCI	GTSAC	4 cut(s)	190, 200, 845, 1945
NsiI	ATGCAT	1 cut(s)	1662
NspI	RCATGY	8 cut(s)	362, 590, 612, 666, 733, 1480, 1785, 2401
PaeI	GCATGC	2 cut(s)	362, 1785
PagI	TCATGA	1 cut(s)	837
PceI	AGGCCT	1 cut(s)	886
PciI	ACATGT	2 cut(s)	608, 2397
PciSI	GCTCTTC	1 cut(s)	784
PcsI	WCGNNNNNNNCGW	1 cut(s)	1024
PctI	GAATGC	1 cut(s)	1126
PdmI	GAANNNNTTC	3 cut(s)	793, 1443, 2297
PfeI	GAWTC	4 cut(s)	410, 1341, 1439, 1464
PleI	GAGTC	4 cut(s)	502, 943, 1582, 1747
PpsI	GAGTC	4 cut(s)	502, 943, 1582, 1747
Ppu21I	YACGTR	1 cut(s)	641
PpuMI	RGGWCCY	1 cut(s)	173
PscI	ACATGT	2 cut(s)	608, 2397
Psp5II	RGGWCCY	1 cut(s)	173
Psp6I	CCWGG	2 cut(s)	1273, 1884
PspFI	CCCAGC	1 cut(s)	1726
PspGI	CCWGG	2 cut(s)	1273, 1884
PspN4I	GGNNCC	4 cut(s)	23, 174, 714, 1540
PspPI	GGNCC	3 cut(s)	173, 712, 971
PspPPI	RGGWCCY	1 cut(s)	173
PstI	CTGCAG	3 cut(s)	184, 1129, 1222
PstNI	CAGNNNCTG	1 cut(s)	194
PsuI	RGATCY	2 cut(s)	1538, 1972
PvuII	CAGCTG	1 cut(s)	73
RsaI	GTAC	4 cut(s)	702, 1057, 1282, 2228
RsaNI	GTAC	4 cut(s)	701, 1056, 1281, 2227
RseI	CAYNNNNRTG	2 cut(s)	667, 1655
SapI	GCTCTTC	1 cut(s)	784
SaqAI	TTAA	7 cut(s)	44, 449, 576, 741, 770, 944, 2183
Sau3AI	GATC	9 cut(s)	889, 898, 1538, 1636, 1732, 1909, 1972, 1987, 2124
Sau96I	GGNCC	3 cut(s)	173, 712, 971
SchI	GAGTC	4 cut(s)	503, 943, 1583, 1748
ScrFI	CCNGG	2 cut(s)	1275, 1886
SduI	GDGCHC	1 cut(s)	685
SfaNI	GCATC	5 cut(s)	49, 462, 1073, 1152, 1690
SfcI	CTRYAG	3 cut(s)	180, 1125, 1218
SinI	GGWCC	2 cut(s)	173, 712
SmiMI	CAYNNNNRTG	2 cut(s)	667, 1655
SphI	GCATGC	2 cut(s)	362, 1785
SseBI	AGGCCT	1 cut(s)	886
SsiI	CCGC	6 cut(s)	25, 508, 733, 751, 868, 2173
SspI	AATATT	1 cut(s)	1982
SspMI	CTAG	5 cut(s)	144, 1053, 1457, 1896, 2039
StuI	AGGCCT	1 cut(s)	886
StyD4I	CCNGG	2 cut(s)	1273, 1884
StyI	CCWWGG	1 cut(s)	967
TaaI	ACNGT	7 cut(s)	190, 217, 906, 1081, 1141, 1367, 2368
TaiI	ACGT	2 cut(s)	202, 643
TaqI	TCGA	3 cut(s)	102, 497, 555
TatI	WGTACW	2 cut(s)	1055, 2226
TfiI	GAWTC	4 cut(s)	410, 1341, 1439, 1464
Tru1I	TTAA	7 cut(s)	44, 449, 576, 741, 770, 944, 2183
Tru9I	TTAA	7 cut(s)	44, 449, 576, 741, 770, 944, 2183
TscAI	CASTG	4 cut(s)	69, 195, 981, 2224
TseFI	GTSAC	4 cut(s)	190, 200, 845, 1945
Tsp45I	GTSAC	4 cut(s)	190, 200, 845, 1945
TspDTI	ATGAA	9 cut(s)	456, 615, 826, 1133, 1452, 1471, 1791, 2109, 2328
TspRI	CASTG	4 cut(s)	69, 195, 981, 2224
VpaK11BI	GGWCC	2 cut(s)	173, 712
XagI	CCTNNNNNAGG	1 cut(s)	1592
XapI	RAATTY	3 cut(s)	1031, 1925, 2066
XceI	RCATGY	8 cut(s)	362, 590, 612, 666, 733, 1480, 1785, 2401
XmiI	GTMKAC	1 cut(s)	1203
XmnI	GAANNNNTTC	3 cut(s)	793, 1443, 2297
XspI	CTAG	5 cut(s)	144, 1053, 1457, 1896, 2039
Zsp2I	ATGCAT	1 cut(s)	1662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.