Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007165

Physical Location & Seq

Genomic Coordinates Reverse (-)

18043672 .. 18047806

Gene Structure 4135 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G48790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGGGTCGTCTTTTGAGACCATCGATATCGCTACCAGTGCTCGGAGAATTGGCGTAGATAATCGTATTTCTCTCAAATTTTACTTCAGGATCGCTGATAATATCCTCAAACAGGCCAACATATTTCGGGCAGAGAAGAATGTTATTGATTTATATGTCATGCTTCTGCGGTTTTCAAGCTTGGCTCTCGAGACTATACCGTCCCATCGAGATTACAGAACATCTCTAAAAAGCAATAAAGAGTATTTGAGAATGAGACTACTAGATGTCTTGACGGAGCTGGAGAAGTTGAAACCAGTTGTACAGCAAAGGATTGATGAACTGTATCCCAAGCTCAAACCTCGATATAACGTTCAAGCTCATCCAGCAAATGGTTCCCTAGGCTGGTCTTCTGCCGTGAAACCGTCATTTAATAGCTATGATCATGCAAAGGTAAGAAATCCTCCTGGACATAATTCTGGCTACATGGGTTCCAGGGGTCAGCAATTTTTGAACGCTGCACCACTTGAAGAGCGTTTCCGAAAGATGTCGGTGAACTTCCGACCAAATGAAGAAACCCTTTCCAAGCATTCTATCTTGGGTCCAGGTGGACTCTCTGCACAGTGGCAGCCACCAAAGTATGATACAAAGGTTCAATATCCAAGCAATATAGATTTTTCGCCTGTTGTAATCCCAAGCTTCCAACAACTTGTGGACAGCAAACCAATGATAACGAATGGCAGTAACGATGAACCTGAAAAGCCAATTGTGGAACCCAGTGTTGCATCTAATGAAAAAATCCAGAAAAATTACACTGAAGAGCTTTCTTCCATGATTTCTTTCGAAGAGCCAGAAAGCGTTAATGAGAACAATCTCATTAGGCAACCTTCACCACCTCCAGTGCTAGCAGAAGTTCAAGACTTGGTTCCTGCTTTATGTCCTGAAGTTAGAGAACCGGAATGTATGATAGAAAACTCTCTGCCGGATGAGTCTCTACGGTCGGAGTCTCCTCTTGAACTTCATATTGCGACTTCAATGATGGATACCTTTATGAGGCTTGCCAAGTCAAACACTAAAAAGAATTTAGAGACGTGTGGTATTCTTGCCGGTTCACTAAAAAACAGAAAATTTTACATTACAGCTCTCATCATACCAAAGCAGGAATCGACATCTGACTCGTGTCAGGCCACGAACGAAGAAGAGATATTTGAAGTACAGGACAAGCAATCCCTTTTCCCACTCGGATGGATTCATACGCATCCGACACAGTCTTGTTTCATGTCATCCATTGATGTTCACACACACTATTCATACCAGATTATGTTACCAGAAGCTGTGGCAATCGTTATGGCGCCACAAGACTCTTCAAGGAATCACGGAATATTTCGGCTGACGACGCCGGGAGGAATGACGGTGATAAGGAATTGTGACCGGCGTGGGTTTCATGCGCACAGTTCACCGGAGGACGGAGGGCCAATTTACAATACCTGTAAGGAAGTTTACATGAACCCAAATCTCAAGTTTGATGTCATTGATCTCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016579 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070536 GO:0070646 GO:0070647 GO:0071108 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

JAB USP8_dimer

Protein Analysis

507

Amino Acids

57.38

Weight (kDa)

6.26

Isoelectric Point (pI)

58.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
USP8_dimer	PF08969	10 - 104	4.8e-11	USP8 dimerisation domain
JAB	PF01398	331 - 437	5.4e-19	JAB1/Mov34/MPN/PAD-1 ubiquitin protease
Prok-JAB	PF14464	344 - 430	2e-07	Prokaryotic homologs of the JAB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48790
fragaria_vesca	FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880
malus_domestica	MD06G1217700.v1.1 MD14G1227900.v1.1
prunus_persica	Prupe.5G222900_v2.0.a1
pyrus_communis	pycom06g19390 pycom14g18930
rosa_chinensis	RchiOBHm_Chr7g0185701
rosa_laevigata	RLG00000004893
rosa_multiflora	Rmu_sc0004909.1_g000002 Rmu_sc0008747.1_g000004 Rmu_sc0023648.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268720
rosa_rugosa	Rorug06G0470600 Rorug06G0470700
rosa_samantha	Rh7AG071800 Rh7BG076100 Rh7CG076100 Rh7DG076100
rosa_wichuraiana	Rw7G006340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	199
Acc16I	TGCGCA	1 cut(s)	1428
AccB1I	GGYRCC	1 cut(s)	1330
AccB7I	CCANNNNNTGG	1 cut(s)	371
AciI	CCGC	1 cut(s)	169
AclI	AACGTT	1 cut(s)	351
AclWI	GGATC	1 cut(s)	98
AcsI	RAATTY	3 cut(s)	77, 1060, 1106
AcuI	CTGAAG	3 cut(s)	70, 816, 942
AcyI	GRCGYC	2 cut(s)	1331, 1376
AfaI	GTAC	2 cut(s)	303, 1194
AfiI	CCNNNNNNNGG	6 cut(s)	42, 112, 371, 384, 1032, 1445
AflIII	ACRYGT	1 cut(s)	1070
AjiI	CACGTC	1 cut(s)	1071
AjnI	CCWGG	3 cut(s)	445, 473, 583
AluBI	AGCT	9 cut(s)	180, 280, 334, 359, 417, 678, 802, 1121, 1313
AluI	AGCT	9 cut(s)	180, 280, 334, 359, 417, 678, 802, 1121, 1313
Alw21I	GWGCWC	1 cut(s)	43
Alw26I	GTCTC	6 cut(s)	11, 185, 250, 975, 990, 1061
AlwI	GGATC	1 cut(s)	98
AlwNI	CAGNNNCTG	1 cut(s)	1313
Ama87I	CYCGRG	1 cut(s)	188
AoxI	GGCC	3 cut(s)	114, 1164, 1451
ApeKI	GCWGC	2 cut(s)	497, 607
ApoI	RAATTY	3 cut(s)	77, 1060, 1106
AspA2I	CCTAGG	1 cut(s)	379
AspLEI	GCGC	2 cut(s)	1333, 1429
AspS9I	GGNCC	2 cut(s)	581, 1451
AsuC2I	CCSGG	1 cut(s)	1380
AsuHPI	GGTGA	4 cut(s)	544, 861, 1405, 1428
AsuII	TTCGAA	1 cut(s)	822
AsuNHI	GCTAGC	1 cut(s)	883
AvaI	CYCGRG	1 cut(s)	188
AvaII	GGWCC	1 cut(s)	581
AvrII	CCTAGG	1 cut(s)	379
BaeI	ACNNNNGTAYC	2 cut(s)	615, 648
BanI	GGYRCC	1 cut(s)	1330
BauI	CACGAG	1 cut(s)	1156
BbsI	GAAGAC	1 cut(s)	381
Bbv12I	GWGCWC	1 cut(s)	43
BbvI	GCAGC	2 cut(s)	484, 619
BccI	CCATC	4 cut(s)	29, 213, 1012, 1218
BceAI	ACGGC	1 cut(s)	380
BciT130I	CCWGG	3 cut(s)	447, 475, 585
BciVI	GTATCC	2 cut(s)	336, 1015
BclI	TGATCA	1 cut(s)	421
BcnI	CCSGG	1 cut(s)	1380
BcoDI	GTCTC	6 cut(s)	11, 185, 250, 975, 990, 1061
BfaI	CTAG	3 cut(s)	263, 380, 884
BfoI	RGCGCY	1 cut(s)	1334
BfuI	GTATCC	2 cut(s)	336, 1015
BisI	GCNGC	2 cut(s)	498, 608
BlnI	CCTAGG	1 cut(s)	379
BlsI	GCNGC	2 cut(s)	499, 609
Bme1390I	CCNGG	4 cut(s)	447, 475, 585, 1380
Bme18I	GGWCC	1 cut(s)	581
BmeT110I	CYCGRG	1 cut(s)	188
BmgBI	CACGTC	1 cut(s)	1071
BmgT120I	GGNCC	2 cut(s)	581, 1451
BmiI	GGNNCC	6 cut(s)	376, 472, 582, 753, 906, 1332
BmrFI	CCNGG	4 cut(s)	447, 475, 585, 1380
BmrI	ACTGGG	1 cut(s)	750
BmsI	GCATC	2 cut(s)	773, 1246
BmtI	GCTAGC	1 cut(s)	887
BmuI	ACTGGG	1 cut(s)	750
BoxI	GACNNNNGTC	1 cut(s)	1158
BpiI	GAAGAC	1 cut(s)	381
BpmI	CTGGAG	2 cut(s)	302, 861
Bpu14I	TTCGAA	1 cut(s)	822
BpuEI	CTTGAG	1 cut(s)	1481
BpuMI	CCSGG	1 cut(s)	1380
Bsa29I	ATCGAT	1 cut(s)	24
BsaHI	GRCGYC	2 cut(s)	1331, 1376
BsaI	GGTCTC	1 cut(s)	11
BsaJI	CCNNGG	2 cut(s)	379, 474
BsaWI	WCCGGW	2 cut(s)	934, 1438
Bsc4I	CCNNNNNNNGG	6 cut(s)	42, 112, 371, 384, 1032, 1445
Bse118I	RCCGGY	2 cut(s)	1085, 1410
Bse1I	ACTGG	4 cut(s)	36, 296, 756, 878
BseBI	CCWGG	3 cut(s)	447, 475, 585
BseCI	ATCGAT	1 cut(s)	24
BseDI	CCNNGG	2 cut(s)	379, 474
BseGI	GGATG	5 cut(s)	361, 970, 1229, 1237, 1262
BseLI	CCNNNNNNNGG	6 cut(s)	42, 112, 371, 384, 1032, 1445
BseNI	ACTGG	4 cut(s)	36, 296, 756, 878
BseRI	GAGGAG	1 cut(s)	978
BseXI	GCAGC	2 cut(s)	484, 619
BsgI	GTGCAG	2 cut(s)	483, 582
Bsh1285I	CGRYCG	1 cut(s)	980
BshFI	GGCC	3 cut(s)	116, 1166, 1453
BshNI	GGYRCC	1 cut(s)	1330
BshVI	ATCGAT	1 cut(s)	24
BsiEI	CGRYCG	1 cut(s)	980
BsiHKAI	GWGCWC	1 cut(s)	43
BsiHKCI	CYCGRG	1 cut(s)	188
BsiSI	CCGG	6 cut(s)	935, 962, 1086, 1379, 1411, 1439
BslFI	GGGAC	1 cut(s)	187
BslI	CCNNNNNNNGG	6 cut(s)	42, 112, 371, 384, 1032, 1445
BsmAI	GTCTC	6 cut(s)	11, 185, 250, 975, 990, 1061
BsmBI	CGTCTC	1 cut(s)	1061
BsmFI	GGGAC	1 cut(s)	187
BsmI	GAATGC	1 cut(s)	568
BsnI	GGCC	3 cut(s)	116, 1166, 1453
Bso31I	GGTCTC	1 cut(s)	11
BsoBI	CYCGRG	1 cut(s)	188
Bsp119I	TTCGAA	1 cut(s)	822
Bsp1286I	GDGCHC	1 cut(s)	43
Bsp1407I	TGTACA	1 cut(s)	301
Bsp143I	GATC	3 cut(s)	90, 421, 1513
BspACI	CCGC	1 cut(s)	169
BspANI	GGCC	3 cut(s)	116, 1166, 1453
BspDI	ATCGAT	1 cut(s)	24
BspLI	GGNNCC	6 cut(s)	376, 472, 582, 753, 906, 1332
BspOI	GCTAGC	1 cut(s)	887
BspPI	GGATC	1 cut(s)	98
BspQI	GCTCTTC	3 cut(s)	504, 792, 819
BspT104I	TTCGAA	1 cut(s)	822
BspT107I	GGYRCC	1 cut(s)	1330
BspTNI	GGTCTC	1 cut(s)	11
BsrFI	RCCGGY	2 cut(s)	1085, 1410
BsrGI	TGTACA	1 cut(s)	301
BsrI	ACTGG	4 cut(s)	36, 296, 756, 878
BssAI	RCCGGY	2 cut(s)	1085, 1410
BssECI	CCNNGG	2 cut(s)	379, 474
BssMI	GATC	3 cut(s)	90, 421, 1513
BssNI	GRCGYC	2 cut(s)	1331, 1376
BssSI	CACGAG	1 cut(s)	1156
BssT1I	CCWWGG	1 cut(s)	379
Bst2BI	CACGAG	1 cut(s)	1156
Bst2UI	CCWGG	3 cut(s)	447, 475, 585
Bst4CI	ACNGT	8 cut(s)	201, 324, 405, 603, 978, 1248, 1393, 1433
Bst6I	CTCTTC	5 cut(s)	504, 792, 819, 1173, 1348
BstACI	GRCGYC	2 cut(s)	1331, 1376
BstAUI	TGTACA	1 cut(s)	301
BstBI	TTCGAA	1 cut(s)	822
BstC8I	GCNNGC	2 cut(s)	885, 1038
BstDEI	CTNAG	1 cut(s)	1517
BstENI	CCTNNNNNAGG	2 cut(s)	110, 1030
BstF5I	GGATG	5 cut(s)	361, 970, 1229, 1237, 1262
BstH2I	RGCGCY	1 cut(s)	1334
BstHHI	GCGC	2 cut(s)	1333, 1429
BstKTI	GATC	3 cut(s)	93, 424, 1516
BstMAI	GTCTC	6 cut(s)	11, 185, 250, 975, 990, 1061
BstMBI	GATC	3 cut(s)	90, 421, 1513
BstMCI	CGRYCG	1 cut(s)	980
BstMWI	GCNNNNNNNGC	3 cut(s)	38, 365, 1375
BstNI	CCWGG	3 cut(s)	447, 475, 585
BstPAI	GACNNNNGTC	1 cut(s)	1158
BstSCI	CCNGG	4 cut(s)	445, 473, 583, 1378
BstV1I	GCAGC	2 cut(s)	484, 619
BstV2I	GAAGAC	1 cut(s)	381
BstXI	CCANNNNNNTGG	1 cut(s)	1224
Bsu15I	ATCGAT	1 cut(s)	24
BsuI	GTATCC	2 cut(s)	336, 1015
BsuRI	GGCC	3 cut(s)	116, 1166, 1453
BsuTUI	ATCGAT	1 cut(s)	24
BtrI	CACGTC	1 cut(s)	1071
BtsCI	GGATG	5 cut(s)	361, 970, 1229, 1237, 1262
BtsIMutI	CAGTG	5 cut(s)	43, 608, 763, 792, 885
Cac8I	GCNNGC	2 cut(s)	885, 1038
CaiI	CAGNNNCTG	1 cut(s)	1313
CfoI	GCGC	2 cut(s)	1333, 1429
Cfr10I	RCCGGY	2 cut(s)	1085, 1410
Cfr13I	GGNCC	2 cut(s)	581, 1451
ClaI	ATCGAT	1 cut(s)	24
CseI	GACGC	1 cut(s)	1384
Csp6I	GTAC	2 cut(s)	302, 1193
CviAII	CATG	7 cut(s)	160, 425, 466, 811, 1258, 1424, 1483
CviQI	GTAC	2 cut(s)	302, 1193
DdeI	CTNAG	1 cut(s)	1517
DinI	GGCGCC	1 cut(s)	1332
DpnI	GATC	3 cut(s)	92, 423, 1515
DpnII	GATC	3 cut(s)	90, 421, 1513
DrdI	GACNNNNNNGTC	1 cut(s)	199
DseDI	GACNNNNNNGTC	1 cut(s)	199
Eam1104I	CTCTTC	5 cut(s)	504, 792, 819, 1173, 1348
EarI	CTCTTC	5 cut(s)	504, 792, 819, 1173, 1348
Eco130I	CCWWGG	1 cut(s)	379
Eco31I	GGTCTC	1 cut(s)	11
Eco32I	GATATC	1 cut(s)	28
Eco47I	GGWCC	1 cut(s)	581
Eco57I	CTGAAG	3 cut(s)	70, 816, 942
Eco88I	CYCGRG	1 cut(s)	188
EcoNI	CCTNNNNNAGG	2 cut(s)	110, 1030
EcoRII	CCWGG	3 cut(s)	445, 473, 583
EcoRV	GATATC	1 cut(s)	28
EcoT14I	CCWWGG	1 cut(s)	379
EgeI	GGCGCC	1 cut(s)	1332
EheI	GGCGCC	1 cut(s)	1332
ErhI	CCWWGG	1 cut(s)	379
Esp3I	CGTCTC	1 cut(s)	1061
FaeI	CATG	7 cut(s)	163, 428, 469, 814, 1261, 1427, 1486
FalI	AAGNNNNNCTT	2 cut(s)	543, 575
FaqI	GGGAC	1 cut(s)	187
FatI	CATG	7 cut(s)	159, 424, 465, 810, 1257, 1423, 1482
FbaI	TGATCA	1 cut(s)	421
Fnu4HI	GCNGC	2 cut(s)	498, 608
FokI	GGATG	5 cut(s)	348, 977, 1224, 1236, 1249
Fsp4HI	GCNGC	2 cut(s)	498, 608
FspAI	RTGCGCAY	1 cut(s)	1428
FspBI	CTAG	3 cut(s)	263, 380, 884
FspI	TGCGCA	1 cut(s)	1428
GlaI	GCGC	2 cut(s)	1332, 1428
GluI	GCNGC	2 cut(s)	498, 608
GsuI	CTGGAG	2 cut(s)	302, 861
HaeII	RGCGCY	1 cut(s)	1334
HaeIII	GGCC	3 cut(s)	116, 1166, 1453
HapII	CCGG	6 cut(s)	935, 962, 1086, 1379, 1411, 1439
HgaI	GACGC	1 cut(s)	1384
HhaI	GCGC	2 cut(s)	1333, 1429
Hin1I	GRCGYC	2 cut(s)	1331, 1376
Hin1II	CATG	7 cut(s)	163, 428, 469, 814, 1261, 1427, 1486
Hin6I	GCGC	2 cut(s)	1331, 1427
HinP1I	GCGC	2 cut(s)	1331, 1427
HindIII	AAGCTT	2 cut(s)	178, 676
HinfI	GANTC	8 cut(s)	591, 968, 983, 1142, 1154, 1228, 1340, 1351
HpaII	CCGG	6 cut(s)	935, 962, 1086, 1379, 1411, 1439
HphI	GGTGA	4 cut(s)	544, 861, 1405, 1428
Hpy166II	GTNNAC	7 cut(s)	535, 590, 694, 1091, 1276, 1436, 1480
Hpy188I	TCNGA	8 cut(s)	45, 521, 542, 982, 1153, 1223, 1242, 1520
Hpy188III	TCNNGA	9 cut(s)	88, 188, 190, 209, 271, 781, 896, 920, 992
Hpy8I	GTNNAC	7 cut(s)	535, 590, 694, 1091, 1276, 1436, 1480
Hpy99I	CGWCG	1 cut(s)	1378
HpyAV	CCTTC	1 cut(s)	876
HpyCH4III	ACNGT	8 cut(s)	201, 324, 405, 603, 978, 1248, 1393, 1433
HpyCH4IV	ACGT	2 cut(s)	351, 1070
HpyCH4V	TGCA	4 cut(s)	428, 500, 599, 764
HpyF10VI	GCNNNNNNNGC	3 cut(s)	38, 365, 1375
HpyF3I	CTNAG	1 cut(s)	1517
HpySE526I	ACGT	2 cut(s)	351, 1070
Hsp92I	GRCGYC	2 cut(s)	1331, 1376
Hsp92II	CATG	7 cut(s)	163, 428, 469, 814, 1261, 1427, 1486
HspAI	GCGC	2 cut(s)	1331, 1427
KasI	GGCGCC	1 cut(s)	1330
Ksp22I	TGATCA	1 cut(s)	421
Kzo9I	GATC	3 cut(s)	90, 421, 1513
LguI	GCTCTTC	3 cut(s)	504, 792, 819
LmnI	GCTCC	1 cut(s)	277
Lsp1109I	GCAGC	2 cut(s)	484, 619
LweI	GCATC	2 cut(s)	773, 1246
MaeI	CTAG	3 cut(s)	263, 380, 884
MaeII	ACGT	2 cut(s)	351, 1070
MaeIII	GTNAC	3 cut(s)	722, 1302, 1406
MalI	GATC	3 cut(s)	92, 423, 1515
MboI	GATC	3 cut(s)	90, 421, 1513
MfeI	CAATTG	1 cut(s)	744
MhlI	GDGCHC	1 cut(s)	43
Mly113I	GGCGCC	1 cut(s)	1331
MlyI	GAGTC	5 cut(s)	585, 977, 992, 1148, 1334
MmeI	TCCRAC	4 cut(s)	565, 706, 960, 1265
MnlI	CCTC	9 cut(s)	116, 351, 453, 885, 999, 1026, 1376, 1435, 1442
MseI	TTAA	2 cut(s)	411, 840
MslI	CAYNNNNRTG	1 cut(s)	1222
MspI	CCGG	6 cut(s)	935, 962, 1086, 1379, 1411, 1439
MspR9I	CCNGG	4 cut(s)	447, 475, 585, 1380
MunI	CAATTG	1 cut(s)	744
Mva1269I	GAATGC	1 cut(s)	568
MvaI	CCWGG	3 cut(s)	447, 475, 585
MwoI	GCNNNNNNNGC	3 cut(s)	38, 365, 1375
NarI	GGCGCC	1 cut(s)	1331
NciI	CCSGG	1 cut(s)	1380
NdeII	GATC	3 cut(s)	90, 421, 1513
NheI	GCTAGC	1 cut(s)	883
NlaIII	CATG	7 cut(s)	163, 428, 469, 814, 1261, 1427, 1486
NlaIV	GGNNCC	6 cut(s)	376, 472, 582, 753, 906, 1332
NmuCI	GTSAC	1 cut(s)	1406
NsbI	TGCGCA	1 cut(s)	1428
NspV	TTCGAA	1 cut(s)	822
PaeR7I	CTCGAG	1 cut(s)	188
PciSI	GCTCTTC	3 cut(s)	504, 792, 819
PctI	GAATGC	1 cut(s)	568
PfeI	GAWTC	3 cut(s)	1142, 1228, 1351
PflFI	GACNNNGTC	1 cut(s)	1246
PflMI	CCANNNNNTGG	1 cut(s)	371
PfoI	TCCNGGA	1 cut(s)	445
PkrI	GCNGC	2 cut(s)	499, 609
PleI	GAGTC	5 cut(s)	585, 976, 991, 1148, 1334
PluTI	GGCGCC	1 cut(s)	1334
PpsI	GAGTC	5 cut(s)	585, 976, 991, 1148, 1334
PshAI	GACNNNNGTC	1 cut(s)	1158
Psp1406I	AACGTT	1 cut(s)	351
Psp6I	CCWGG	3 cut(s)	445, 473, 583
PspGI	CCWGG	3 cut(s)	445, 473, 583
PspN4I	GGNNCC	6 cut(s)	376, 472, 582, 753, 906, 1332
PspPI	GGNCC	2 cut(s)	581, 1451
PstNI	CAGNNNCTG	1 cut(s)	1313
PsyI	GACNNNGTC	1 cut(s)	1246
RsaI	GTAC	2 cut(s)	303, 1194
RsaNI	GTAC	2 cut(s)	302, 1193
RseI	CAYNNNNRTG	1 cut(s)	1222
SapI	GCTCTTC	3 cut(s)	504, 792, 819
SaqAI	TTAA	2 cut(s)	411, 840
SatI	GCNGC	2 cut(s)	498, 608
Sau3AI	GATC	3 cut(s)	90, 421, 1513
Sau96I	GGNCC	2 cut(s)	581, 1451
SchI	GAGTC	5 cut(s)	585, 977, 992, 1148, 1334
ScrFI	CCNGG	4 cut(s)	447, 475, 585, 1380
SduI	GDGCHC	1 cut(s)	43
SfaNI	GCATC	2 cut(s)	773, 1246
SfoI	GGCGCC	1 cut(s)	1332
Sfr274I	CTCGAG	1 cut(s)	188
SfuI	TTCGAA	1 cut(s)	822
SinI	GGWCC	1 cut(s)	581
SlaI	CTCGAG	1 cut(s)	188
SmiMI	CAYNNNNRTG	1 cut(s)	1222
SmlI	CTYRAG	2 cut(s)	188, 1496
SmoI	CTYRAG	2 cut(s)	188, 1496
SsiI	CCGC	1 cut(s)	169
SspDI	GGCGCC	1 cut(s)	1330
SspI	AATATT	1 cut(s)	1362
SspMI	CTAG	3 cut(s)	263, 380, 884
StyD4I	CCNGG	4 cut(s)	445, 473, 583, 1378
StyI	CCWWGG	1 cut(s)	379
TaaI	ACNGT	8 cut(s)	201, 324, 405, 603, 978, 1248, 1393, 1433
TaiI	ACGT	2 cut(s)	354, 1073
TaqI	TCGA	6 cut(s)	24, 189, 208, 343, 822, 1145
TatI	WGTACW	2 cut(s)	301, 1192
TfiI	GAWTC	3 cut(s)	1142, 1228, 1351
Tru1I	TTAA	2 cut(s)	411, 840
Tru9I	TTAA	2 cut(s)	411, 840
TscAI	CASTG	5 cut(s)	43, 608, 763, 799, 885
TseFI	GTSAC	1 cut(s)	1406
TseI	GCWGC	2 cut(s)	497, 607
Tsp45I	GTSAC	1 cut(s)	1406
TspGWI	ACGGA	3 cut(s)	290, 1371, 1461
TspRI	CASTG	5 cut(s)	43, 608, 763, 799, 885
Tth111I	GACNNNGTC	1 cut(s)	1246
Van91I	CCANNNNNTGG	1 cut(s)	371
VpaK11BI	GGWCC	1 cut(s)	581
XagI	CCTNNNNNAGG	2 cut(s)	110, 1030
XapI	RAATTY	3 cut(s)	77, 1060, 1106
XhoI	CTCGAG	1 cut(s)	188
XmaJI	CCTAGG	1 cut(s)	379
XspI	CTAG	3 cut(s)	263, 380, 884

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.