Rorug06G0470600

AMSH-like ubiquitin thioesterase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
59396681 .. 59402410
5730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0470600.1

Sequence Viewer

Length: 3318 bp
ATGTACGCGGTTGGGAGGTTAGGGAGCTACATCTCGAGGGGGGTATACACCGTCTCGGGGCCCTTTCACCCTTTTGGTGGAGCTGTGGATATTATTGTAGTTCAACAAGAAGATGGGAGCTTCAAGTCTTCGGCGTGGAATGTCAGGTTTGGCAAGTTTCAAGGAGTTTTGAAGTCCAAGGAGAAGGTGGTGAACATTTGTGTAAATGGAGAGGACGCTAGTTTCCACATGTATTTGGATAATAAAGGGGAGGCTTACTTCCTTAGGGAGGTTGATGCAAAAGAAGGGGAATCTGTGTTGTTTCCTTCCACGTCTTCCAGTGATGAGACGGATGAGCAATCTCAAGAAAAGAGGCAGCCAGTGAAGTCCAAAAGTTGCAAGTATGATGCTGAAAGTTTGATTGTTGATCATAATAATAAGTGCAATGGGAAGGTATTATCCAGGACTAATTCCCGGAAGTCGCGGATATTTGGGATATTTGGAAACAGGTCAATGAAGGAGAGAATGACGGTCAACGAGGAGGCAGAGGGTGACAATAGCACGATTAGAAGGGTGGATTCTTTGGAGCGTGCAGAGTTTGCGGCCAATCTTATGGAGGTGAAATGGTCCACTAGTCTTGCTACCAAGAAAAACAGGAAAGAGGGTGATTCTCGTCTCTCTTGTCCTGATATTTTGGAGAGTGGAGTTGATGAAGATATGCAGATTAGTTCTGAGCACCGCCGGGTGTGCTCATCTCTACCTGATTGTGCTTTGCAGGAGGCGACTGCCTTCTGCAATGCCCAAATAGGCAATGATCCTCTGTCTGGCTTTGACAAAACACCTAGTTATGCGGAGGAAGCTAGTCTAATTTCATGTTTAAACACCCCGAATATAGTGTCTAGAGTATGCAGAGAATTGGATGAGTCTGGGGCAACTGAAAATGATGGAAATGTAAAGGCACTCATATCCAATATCACAGGTTCGGATCCTACAATTCCACACTCACTAGAGGTTGAAGCATTTCCATTTCCTGGAAAGCATTTTGTTGGACGGGTTTTTGATGACAAAGGTGTTGTACTAGCTGGCTGTGGCATTTCCGAGAAGGACGGTGGAATAGATAGAGTTGAATCCTTTATTTACTGTCAATCATCAGAGAGCGCAGTAGTGGGAACAGATGTTTCCAGCGAACAAACTCATGGAAAACTTTACATTGCTAGAGGAGATTGTGGAAAACTTCATGTTCATGCTGAAGCAGTACATGCCAGAACTGAACTGCTATCTAAGGATGCGGTTACTGAGCAGTTTGTTGAAGATATTGCCTTAAAGGTGCAACCATTGGAGGCTCCTGAAACTTATTCTCACAAAACAGCTCATCATTCTTGCACGGGTAACCATAATGGGGAGCCTGGAGGGCCAGCAAAAGCTCCAGAGCACTGTAGTCAAATGGTCCCTATTAATGCATTGCCTGATTCAGTTGAGATTGAGTCACGTATCGTATCTAGGTTAAGCAACTCTGACCATCAAGTTCAAGATGAGAAAGAATTTAAAGGCGAAGATATCGCATGTGATGTCCAAACCTCTTCCGGGTACATTAGTGGTTCTGAAATCACTGAAGCCACAAGTGTGGTGCCACCAGGGAGATTAGAAGAAGAACAATTCCTTTTCAGTGACTCTGATGAACTCAACACCACTAAGGTTCAATGCACGGAGTCAAGTTCTTCACAATGTGTAGATGGAGAAATTAGTGTCTTGTGTAGTCCAGATGGCAGTAAAGAATTTAATGGGTCAGCAGTCAGTACAAATTATGAATCATACTCATCTCCAGAAAAGTTTGCTCAAGAAATCCCCTCAACTGGTTTTCAGAAAGTTATAGGTAAACTGAAGGCAACATCAACAACAGTTGACATCCCCAGAAATCAAAAGGCTGCTGATAAGGAAGTTGGGATGCTGGTGGGATCATTGCCCAGTATGTGGCATCAGACTGACAATTTGAGTGCATTGGATCTTGATGCTCCTTTAAGCCATTCGCTGGACTCAAAAGCCAAAACCTTGAAGTGGATACAGCAAAATAGAGATGATTTGAGCTGTATAAAGTTGGACATAGAGCAACAGTTACCTCTGGTGAAGCTAGACGCTGAGAATGCTGAGGGTACAGAGGAGCTCAAAGATGTTCCCGGCAGTCCTGCACTAGGAGATCCATCAAAAGCTAGTGTTACCCCTAGTGGAAGCTGGAAACTCTGGCCTTTCCGTTTCAGGAGAACAAATTCCCAGAAGGCTATGCAACCAAATCTGAATGATTGTGGAAGTCCTGAAGTTGAGAATGCTTCAGAGAGCGCGGTTGGTGTGGATAGTAGTAACATTGTGCTTACACCGAAGGGGATGAAGAAAACAGAAAGGGCAACCTCTCCAACATCTGAGCAGTTGGCATCCTTAAATCTAAATGAAGGGAGAAATACAGTAACTTTCACATTTTCTACTGCAATGCTAGGAAAGCAGCAGGTTGATGCCAGAATTTATCTTTGGAAATGGAATACTCGTATAGTGATCTCAGATGTGGATGGGACAATCACAAAATCAGATGTTCTAGGTCAGTTCATGCCCTTGGTTGGTGTAGATTGGTCACAAACAGGTGTCACTCATTTGTTTTCAGCCATTAAGGAAAATGGATATGAATTACTTTTTTTGAGTGCACGTGCCATTTCTCAGTCCTCTCAGACGCGACAATTTCTGTTTAACCTTAAGCAGGATGGGAAGGCTTTACCTGATGGGCCCGTTGTTATTTCTCCAGATGGACTTTTTCCTTCTCTTTTTCGGGAAGTTATCCGGAGGGCTCCTCATGAATTCAAGATTGCATGCTTAGAGGATATCAAATCATTGTTCCCTTCTGATTGCAACCCGTTCTATGCTGGTTTTGGAAACAGAGATACTGATGAATTCAGCTACCTTAAGGTTGGAATCCCCTTGGGTAAAATCTTCATCATTAATCCCAAGGGTGAGATTGTTGTGAACCGCCGTGTTGATGCAAAGACATATACCTCCCTTCATGCTCTCGTAAATGGCATGTTCCCCCCCACAACTTCCTCACACGAGCAGGAGGATTTTAATTCGTGGAATTTCTGGAAACTCCCACCACCTGATGTCACGTGGAGTTTTGGTTGTAGAATGACAGTGCAGCATCCAATGAACTTTCAGAATATGATCGCTGAAGTTCTGCTTTGCTTCATTTTTGCTGAGCTGGCTGATATAGTGGCGACTCGAAGCAATATATGGAAGACATACAGAAAAACAGTTGGACAGAGGGATCCTGCTCCAGTTTCTCTCGTTGTTTTTCTCTGTTAA

Protein Analysis

1105

Amino Acids

121.43

Weight (kDa)

5.19

Isoelectric Point (pI)

41.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipin_N PF04571 12 - 96 8.4e-28 lipin, N-terminal conserved region
LNS2 PF08235 794 - 1016 1.7e-94 LNS2 (Lipin/Ned1/Smp2)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2467
AccB1I GGYRCC 1 cut(s) 1606
AccB7I CCANNNNNTGG 3 cut(s) 1010, 1950, 2008
AccI GTMKAC 1 cut(s) 45
AccII CGCG 4 cut(s) 8, 463, 2315, 2698
AccIII TCCGGA 1 cut(s) 2802
AciI CCGC 8 cut(s) 8, 463, 581, 718, 830, 1268, 2315, 2989
AclWI GGATC 8 cut(s) 788, 959, 972, 1942, 1989, 2168, 3275, 3288
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 7 cut(s) 1520, 1754, 2242, 2490, 2819, 2912, 3091
AcuI CTGAAG 6 cut(s) 1248, 1611, 1880, 2289, 2310, 3204
AcvI CACGTG 2 cut(s) 2672, 3123
AdeI CACNNNGTG 1 cut(s) 1706
AfaI GTAC 6 cut(s) 5, 1056, 1236, 1568, 1777, 2131
AflII CTTAAG 2 cut(s) 2717, 2924
AflIII ACRYGT 1 cut(s) 228
AhlI ACTAGT 1 cut(s) 611
AjiI CACGTC 1 cut(s) 312
AjnI CCWGG 4 cut(s) 440, 1009, 1384, 1612
AjuI GAANNNNNNNTTGG 2 cut(s) 2482, 2514
AleI CACNNNNGTG 1 cut(s) 1601
Alw21I GWGCWC 5 cut(s) 717, 731, 1413, 2142, 2671
Alw26I GTCTC 3 cut(s) 58, 320, 659
Alw44I GTGCAC 1 cut(s) 2667
AlwI GGATC 8 cut(s) 788, 959, 972, 1942, 1989, 2168, 3275, 3288
Ama87I CYCGRG 2 cut(s) 34, 55
Aor13HI TCCGGA 1 cut(s) 2802
AoxI GGCC 5 cut(s) 59, 582, 1391, 2219, 2747
ApaI GGGCCC 2 cut(s) 63, 2751
ApaLI GTGCAC 1 cut(s) 2667
ApeKI GCWGC 4 cut(s) 355, 1904, 2473, 3151
ApoI RAATTY 7 cut(s) 1520, 1754, 2242, 2490, 2819, 2912, 3091
ArsI GACNNNNNNTTYG 4 cut(s) 860, 892, 1951, 1983
AseI ATTAAT 2 cut(s) 1434, 2961
Asp700I GAANNNNTTC 2 cut(s) 999, 2242
AspLEI GCGC 2 cut(s) 1139, 2315
AspS9I GGNCC 7 cut(s) 59, 60, 606, 1391, 1426, 2747, 2748
AsuC2I CCSGG 4 cut(s) 454, 722, 1564, 2154
AsuHPI GGTGA 7 cut(s) 59, 202, 542, 610, 656, 2113, 2984
AvaI CYCGRG 2 cut(s) 34, 55
AvaII GGWCC 2 cut(s) 606, 1426
AxyI CCTNAGG 1 cut(s) 263
BaeGI GKGCMC 3 cut(s) 63, 2671, 2751
BaeI ACNNNNGTAYC 2 cut(s) 1558, 1591
BamHI GGATCC 2 cut(s) 964, 3280
BanI GGYRCC 1 cut(s) 1606
BanII GRGCYC 4 cut(s) 63, 2142, 2751, 2812
BauI CACGAG 1 cut(s) 3065
BbrPI CACGTG 2 cut(s) 2672, 3123
BbsI GAAGAC 3 cut(s) 120, 306, 3257
Bbv12I GWGCWC 5 cut(s) 717, 731, 1413, 2142, 2671
BbvCI CCTCAGC 1 cut(s) 2124
BbvI GCAGC 4 cut(s) 367, 1891, 2485, 3163
BceAI ACGGC 1 cut(s) 2976
BciT130I CCWGG 4 cut(s) 442, 1011, 1386, 1614
BciVI GTATCC 1 cut(s) 2031
BclI TGATCA 1 cut(s) 406
BcnI CCSGG 4 cut(s) 454, 722, 1564, 2154
BcoDI GTCTC 3 cut(s) 58, 320, 659
BcuI ACTAGT 1 cut(s) 611
BfmI CTRYAG 1 cut(s) 1414
BfrI CTTAAG 2 cut(s) 2717, 2924
BfuAI ACCTGC 1 cut(s) 2467
BfuI GTATCC 1 cut(s) 2031
BglI GCCNNNNNGGC 1 cut(s) 1390
BisI GCNGC 5 cut(s) 356, 582, 1905, 2474, 3152
BlpI GCTNAGC 1 cut(s) 3210
BlsI GCNGC 5 cut(s) 357, 583, 1906, 2475, 3153
Bme1390I CCNGG 8 cut(s) 442, 454, 722, 1011, 1386, 1564, 1614, 2154
Bme18I GGWCC 2 cut(s) 606, 1426
BmeT110I CYCGRG 2 cut(s) 34, 55
BmgBI CACGTC 1 cut(s) 312
BmgT120I GGNCC 7 cut(s) 59, 60, 606, 1391, 1426, 2747, 2748
BmrFI CCNGG 8 cut(s) 442, 454, 722, 1011, 1386, 1564, 1614, 2154
BmrI ACTGGG 1 cut(s) 1938
BmuI ACTGGG 1 cut(s) 1938
BpiI GAAGAC 3 cut(s) 120, 306, 3257
BplI GAGNNNNNCTC 2 cut(s) 2797, 2829
BpmI CTGGAG 5 cut(s) 1389, 1407, 1785, 2748, 3273
Bpu10I CCTNAGC 1 cut(s) 2124
Bpu1102I GCTNAGC 1 cut(s) 3210
BpuEI CTTGAG 2 cut(s) 327, 1800
BpuMI CCSGG 4 cut(s) 454, 722, 1564, 2154
BsaAI YACGTR 3 cut(s) 1469, 2672, 3123
BsaJI CCNNGG 5 cut(s) 177, 1613, 2580, 2940, 2967
BsaWI WCCGGW 1 cut(s) 2802
BsaXI ACNNNNNCTCC 2 cut(s) 3118, 3148
Bse1I ACTGG 5 cut(s) 318, 359, 1837, 1944, 3290
Bse21I CCTNAGG 1 cut(s) 263
Bse3DI GCAATG 7 cut(s) 430, 781, 796, 1188, 1439, 1937, 2466
BseAI TCCGGA 1 cut(s) 2802
BseBI CCWGG 4 cut(s) 442, 1011, 1386, 1614
BseDI CCNNGG 5 cut(s) 177, 1613, 2580, 2940, 2967
BseMI GCAATG 7 cut(s) 430, 781, 796, 1188, 1439, 1937, 2466
BseMII CTCAG 9 cut(s) 702, 1266, 2106, 2115, 2385, 2541, 2696, 2705, 3201
BseNI ACTGG 5 cut(s) 318, 359, 1837, 1944, 3290
BseRI GAGGAG 4 cut(s) 533, 1212, 2150, 2802
BseSI GKGCMC 3 cut(s) 63, 2671, 2751
BseXI GCAGC 4 cut(s) 367, 1891, 2485, 3163
BsgI GTGCAG 3 cut(s) 591, 2148, 3170
Bsh1236I CGCG 4 cut(s) 8, 463, 2315, 2698
BshFI GGCC 5 cut(s) 61, 584, 1393, 2221, 2749
BshNI GGYRCC 1 cut(s) 1606
BsiHKAI GWGCWC 5 cut(s) 717, 731, 1413, 2142, 2671
BsiHKCI CYCGRG 2 cut(s) 34, 55
BsiSI CCGG 5 cut(s) 454, 721, 1563, 2154, 2803
BslFI GGGAC 2 cut(s) 1412, 2554
BsmAI GTCTC 3 cut(s) 58, 320, 659
BsmBI CGTCTC 3 cut(s) 58, 320, 659
BsmFI GGGAC 2 cut(s) 1412, 2554
BsmI GAATGC 2 cut(s) 2125, 2305
BsnI GGCC 5 cut(s) 61, 584, 1393, 2221, 2749
BsoBI CYCGRG 2 cut(s) 34, 55
Bsp120I GGGCCC 2 cut(s) 59, 2747
Bsp1286I GDGCHC 8 cut(s) 63, 717, 731, 1413, 2142, 2671, 2751, 2812
Bsp13I TCCGGA 1 cut(s) 2802
Bsp143I GATC 9 cut(s) 406, 793, 964, 1934, 1981, 2173, 2523, 3177, 3280
Bsp1720I GCTNAGC 1 cut(s) 3210
BspACI CCGC 8 cut(s) 8, 463, 581, 718, 830, 1268, 2315, 2989
BspANI GGCC 5 cut(s) 61, 584, 1393, 2221, 2749
BspCNI CTCAG 9 cut(s) 703, 1267, 2107, 2116, 2386, 2540, 2695, 2704, 3202
BspEI TCCGGA 1 cut(s) 2802
BspFNI CGCG 4 cut(s) 8, 463, 2315, 2698
BspHI TCATGA 1 cut(s) 2815
BspMI ACCTGC 1 cut(s) 2467
BspPI GGATC 8 cut(s) 788, 959, 972, 1942, 1989, 2168, 3275, 3288
BspT107I GGYRCC 1 cut(s) 1606
BspTI CTTAAG 2 cut(s) 2717, 2924
BsrDI GCAATG 7 cut(s) 430, 781, 796, 1188, 1439, 1937, 2466
BsrI ACTGG 5 cut(s) 318, 359, 1837, 1944, 3290
BssECI CCNNGG 5 cut(s) 177, 1613, 2580, 2940, 2967
BssMI GATC 9 cut(s) 406, 793, 964, 1934, 1981, 2173, 2523, 3177, 3280
BssNAI GTATAC 1 cut(s) 46
BssSI CACGAG 1 cut(s) 3065
BssT1I CCWWGG 4 cut(s) 177, 2580, 2940, 2967
Bst1107I GTATAC 1 cut(s) 46
Bst2BI CACGAG 1 cut(s) 3065
Bst2UI CCWGG 4 cut(s) 442, 1011, 1386, 1614
Bst6I CTCTTC 1 cut(s) 1564
BstAFI CTTAAG 2 cut(s) 2717, 2924
BstAPI GCANNNNNTGC 2 cut(s) 578, 1238
BstBAI YACGTR 3 cut(s) 1469, 2672, 3123
BstC8I GCNNGC 5 cut(s) 570, 1063, 1395, 2833, 3216
BstEII GGTNACC 1 cut(s) 1367
BstENI CCTNNNNNAGG 3 cut(s) 266, 2166, 2720
BstFNI CGCG 4 cut(s) 8, 463, 2315, 2698
BstHHI GCGC 2 cut(s) 1139, 2315
BstKTI GATC 9 cut(s) 409, 796, 967, 1937, 1984, 2176, 2526, 3180, 3283
BstMAI GTCTC 3 cut(s) 58, 320, 659
BstMBI GATC 9 cut(s) 406, 793, 964, 1934, 1981, 2173, 2523, 3177, 3280
BstMWI GCNNNNNNNGC 8 cut(s) 578, 726, 836, 1238, 1390, 2120, 2470, 3215
BstNI CCWGG 4 cut(s) 442, 1011, 1386, 1614
BstNSI RCATGY 5 cut(s) 232, 1241, 1545, 2835, 3043
BstPI GGTNACC 1 cut(s) 1367
BstSCI CCNGG 8 cut(s) 440, 452, 720, 1009, 1384, 1562, 1612, 2152
BstSFI CTRYAG 1 cut(s) 1414
BstSLI GKGCMC 3 cut(s) 63, 2671, 2751
BstUI CGCG 4 cut(s) 8, 463, 2315, 2698
BstV1I GCAGC 4 cut(s) 367, 1891, 2485, 3163
BstV2I GAAGAC 3 cut(s) 120, 306, 3257
BstX2I RGATCY 4 cut(s) 964, 1981, 2173, 3280
BstXI CCANNNNNNTGG 2 cut(s) 592, 1603
BstYI RGATCY 4 cut(s) 964, 1981, 2173, 3280
BstZ17I GTATAC 1 cut(s) 46
Bsu36I CCTNAGG 1 cut(s) 263
BsuI GTATCC 1 cut(s) 2031
BsuRI GGCC 5 cut(s) 61, 584, 1393, 2221, 2749
BtrI CACGTC 1 cut(s) 312
BtsIMutI CAGTG 6 cut(s) 325, 366, 1411, 1587, 1651, 3153
BveI ACCTGC 1 cut(s) 2467
Cac8I GCNNGC 5 cut(s) 570, 1063, 1395, 2833, 3216
CciI TCATGA 1 cut(s) 2815
CfoI GCGC 2 cut(s) 1139, 2315
Cfr13I GGNCC 7 cut(s) 59, 60, 606, 1391, 1426, 2747, 2748
CseI GACGC 3 cut(s) 224, 2120, 2704
Csp6I GTAC 6 cut(s) 4, 1055, 1235, 1567, 1776, 2130
CspCI CAANNNNNGTGG 2 cut(s) 598, 633
CviQI GTAC 6 cut(s) 4, 1055, 1235, 1567, 1776, 2130
DpnI GATC 9 cut(s) 408, 795, 966, 1936, 1983, 2175, 2525, 3179, 3282
DpnII GATC 9 cut(s) 406, 793, 964, 1934, 1981, 2173, 2523, 3177, 3280
DraI TTTAAA 2 cut(s) 858, 1525
DraIII CACNNNGTG 1 cut(s) 1706
EaeI YGGCCR 1 cut(s) 582
Eam1104I CTCTTC 1 cut(s) 1564
EarI CTCTTC 1 cut(s) 1564
Ecl136II GAGCTC 1 cut(s) 2140
Eco130I CCWWGG 4 cut(s) 177, 2580, 2940, 2967
Eco24I GRGCYC 4 cut(s) 63, 2142, 2751, 2812
Eco32I GATATC 2 cut(s) 1537, 2845
Eco47I GGWCC 2 cut(s) 606, 1426
Eco53kI GAGCTC 1 cut(s) 2140
Eco57I CTGAAG 6 cut(s) 1248, 1611, 1880, 2289, 2310, 3204
Eco72I CACGTG 2 cut(s) 2672, 3123
Eco81I CCTNAGG 1 cut(s) 263
Eco88I CYCGRG 2 cut(s) 34, 55
Eco91I GGTNACC 1 cut(s) 1367
EcoICRI GAGCTC 1 cut(s) 2140
EcoNI CCTNNNNNAGG 3 cut(s) 266, 2166, 2720
EcoO109I RGGNCCY 2 cut(s) 59, 60
EcoO65I GGTNACC 1 cut(s) 1367
EcoRI GAATTC 2 cut(s) 2819, 2912
EcoRII CCWGG 4 cut(s) 440, 1009, 1384, 1612
EcoRV GATATC 2 cut(s) 1537, 2845
EcoT14I CCWWGG 4 cut(s) 177, 2580, 2940, 2967
EcoT22I ATGCAT 1 cut(s) 1441
EcoT38I GRGCYC 4 cut(s) 63, 2142, 2751, 2812
ErhI CCWWGG 4 cut(s) 177, 2580, 2940, 2967
Esp3I CGTCTC 3 cut(s) 58, 320, 659
FalI AAGNNNNNCTT 2 cut(s) 3177, 3209
FaqI GGGAC 2 cut(s) 1412, 2554
FbaI TGATCA 1 cut(s) 406
FblI GTMKAC 1 cut(s) 45
Fnu4HI GCNGC 5 cut(s) 356, 582, 1905, 2474, 3152
FriOI GRGCYC 4 cut(s) 63, 2142, 2751, 2812
Fsp4HI GCNGC 5 cut(s) 356, 582, 1905, 2474, 3152
GlaI GCGC 2 cut(s) 1138, 2314
GluI GCNGC 5 cut(s) 356, 582, 1905, 2474, 3152
GsuI CTGGAG 5 cut(s) 1389, 1407, 1785, 2748, 3273
HaeIII GGCC 5 cut(s) 61, 584, 1393, 2221, 2749
HapII CCGG 5 cut(s) 454, 721, 1563, 2154, 2803
HgaI GACGC 3 cut(s) 224, 2120, 2704
HhaI GCGC 2 cut(s) 1139, 2315
Hin6I GCGC 2 cut(s) 1137, 2313
HinP1I GCGC 2 cut(s) 1137, 2313
HincII GTYRAC 2 cut(s) 514, 1882
HindII GTYRAC 2 cut(s) 514, 1882
HpaII CCGG 5 cut(s) 454, 721, 1563, 2154, 2803
HphI GGTGA 7 cut(s) 59, 202, 542, 610, 656, 2113, 2984
Hpy166II GTNNAC 8 cut(s) 46, 193, 514, 609, 1856, 1882, 2669, 2986
Hpy8I GTNNAC 8 cut(s) 46, 193, 514, 609, 1856, 1882, 2669, 2986
HpyCH4IV ACGT 4 cut(s) 311, 1468, 2671, 3122
HpyF10VI GCNNNNNNNGC 8 cut(s) 578, 726, 836, 1238, 1390, 2120, 2470, 3215
HpySE526I ACGT 4 cut(s) 311, 1468, 2671, 3122
HspAI GCGC 2 cut(s) 1137, 2313
Kpn2I TCCGGA 1 cut(s) 2802
Ksp22I TGATCA 1 cut(s) 406
Kzo9I GATC 9 cut(s) 406, 793, 964, 1934, 1981, 2173, 2523, 3177, 3280
Lsp1109I GCAGC 4 cut(s) 367, 1891, 2485, 3163
MaeII ACGT 4 cut(s) 311, 1468, 2671, 3122
MalI GATC 9 cut(s) 408, 795, 966, 1936, 1983, 2175, 2525, 3179, 3282
MboI GATC 9 cut(s) 406, 793, 964, 1934, 1981, 2173, 2523, 3177, 3280
MflI RGATCY 4 cut(s) 964, 1981, 2173, 3280
MhlI GDGCHC 8 cut(s) 63, 717, 731, 1413, 2142, 2671, 2751, 2812
MlyI GAGTC 6 cut(s) 911, 1472, 1643, 1697, 2006, 3226
MmeI TCCRAC 5 cut(s) 1006, 2055, 2411, 2911, 3250
Mph1103I ATGCAT 1 cut(s) 1441
MroI TCCGGA 1 cut(s) 2802
MroXI GAANNNNTTC 2 cut(s) 999, 2242
MslI CAYNNNNRTG 2 cut(s) 1221, 1601
MspCI CTTAAG 2 cut(s) 2717, 2924
MspI CCGG 5 cut(s) 454, 721, 1563, 2154, 2803
MspR9I CCNGG 8 cut(s) 442, 454, 722, 1011, 1386, 1564, 1614, 2154
MssI GTTTAAAC 1 cut(s) 858
Mva1269I GAATGC 2 cut(s) 2125, 2305
MvaI CCWGG 4 cut(s) 442, 1011, 1386, 1614
MvnI CGCG 4 cut(s) 8, 463, 2315, 2698
MwoI GCNNNNNNNGC 8 cut(s) 578, 726, 836, 1238, 1390, 2120, 2470, 3215
NciI CCSGG 4 cut(s) 454, 722, 1564, 2154
NdeII GATC 9 cut(s) 406, 793, 964, 1934, 1981, 2173, 2523, 3177, 3280
NmuCI GTSAC 6 cut(s) 530, 1464, 1646, 2598, 2611, 3118
NsiI ATGCAT 1 cut(s) 1441
NspI RCATGY 5 cut(s) 232, 1241, 1545, 2835, 3043
OliI CACNNNNGTG 1 cut(s) 1601
PaeI GCATGC 1 cut(s) 2835
PaeR7I CTCGAG 1 cut(s) 34
PagI TCATGA 1 cut(s) 2815
PciI ACATGT 1 cut(s) 228
PctI GAATGC 2 cut(s) 2125, 2305
PdmI GAANNNNTTC 2 cut(s) 999, 2242
PfeI GAWTC 7 cut(s) 290, 557, 647, 1106, 1448, 1787, 2934
PflMI CCANNNNNTGG 3 cut(s) 1010, 1950, 2008
PfoI TCCNGGA 3 cut(s) 440, 452, 1009
PkrI GCNGC 5 cut(s) 357, 583, 1906, 2475, 3153
PleI GAGTC 6 cut(s) 910, 1471, 1643, 1696, 2006, 3226
PmaCI CACGTG 2 cut(s) 2672, 3123
PmeI GTTTAAAC 1 cut(s) 858
PmlI CACGTG 2 cut(s) 2672, 3123
PpsI GAGTC 6 cut(s) 910, 1471, 1643, 1696, 2006, 3226
Ppu21I YACGTR 3 cut(s) 1469, 2672, 3123
PscI ACATGT 1 cut(s) 228
PshBI ATTAAT 2 cut(s) 1434, 2961
Psp124BI GAGCTC 1 cut(s) 2142
Psp6I CCWGG 4 cut(s) 440, 1009, 1384, 1612
PspCI CACGTG 2 cut(s) 2672, 3123
PspEI GGTNACC 1 cut(s) 1367
PspGI CCWGG 4 cut(s) 440, 1009, 1384, 1612
PspOMI GGGCCC 2 cut(s) 59, 2747
PspPI GGNCC 7 cut(s) 59, 60, 606, 1391, 1426, 2747, 2748
PsuI RGATCY 4 cut(s) 964, 1981, 2173, 3280
RsaI GTAC 6 cut(s) 5, 1056, 1236, 1568, 1777, 2131
RsaNI GTAC 6 cut(s) 4, 1055, 1235, 1567, 1776, 2130
RseI CAYNNNNRTG 2 cut(s) 1221, 1601
SacI GAGCTC 1 cut(s) 2142
SatI GCNGC 5 cut(s) 356, 582, 1905, 2474, 3152
Sau3AI GATC 9 cut(s) 406, 793, 964, 1934, 1981, 2173, 2523, 3177, 3280
Sau96I GGNCC 7 cut(s) 59, 60, 606, 1391, 1426, 2747, 2748
SchI GAGTC 6 cut(s) 911, 1472, 1643, 1697, 2006, 3226
ScrFI CCNGG 8 cut(s) 442, 454, 722, 1011, 1386, 1564, 1614, 2154
SduI GDGCHC 8 cut(s) 63, 717, 731, 1413, 2142, 2671, 2751, 2812
SfcI CTRYAG 1 cut(s) 1414
Sfr274I CTCGAG 1 cut(s) 34
SinI GGWCC 2 cut(s) 606, 1426
SlaI CTCGAG 1 cut(s) 34
SmiMI CAYNNNNRTG 2 cut(s) 1221, 1601
SmlI CTYRAG 5 cut(s) 34, 342, 1815, 2717, 2924
SmoI CTYRAG 5 cut(s) 34, 342, 1815, 2717, 2924
SpeI ACTAGT 1 cut(s) 611
SphI GCATGC 1 cut(s) 2835
SsiI CCGC 8 cut(s) 8, 463, 581, 718, 830, 1268, 2315, 2989
SstI GAGCTC 1 cut(s) 2142
StyD4I CCNGG 8 cut(s) 440, 452, 720, 1009, 1384, 1562, 1612, 2152
StyI CCWWGG 4 cut(s) 177, 2580, 2940, 2967
TaiI ACGT 4 cut(s) 314, 1471, 2674, 3125
TaqI TCGA 2 cut(s) 35, 3235
TatI WGTACW 3 cut(s) 1054, 1234, 1775
TauI GCSGC 1 cut(s) 584
TfiI GAWTC 7 cut(s) 290, 557, 647, 1106, 1448, 1787, 2934
TscAI CASTG 6 cut(s) 325, 366, 1418, 1594, 1651, 3153
TseFI GTSAC 6 cut(s) 530, 1464, 1646, 2598, 2611, 3118
TseI GCWGC 4 cut(s) 355, 1904, 2473, 3151
Tsp45I GTSAC 6 cut(s) 530, 1464, 1646, 2598, 2611, 3118
TspGWI ACGGA 3 cut(s) 344, 1700, 2216
TspRI CASTG 6 cut(s) 325, 366, 1418, 1594, 1651, 3153
Van91I CCANNNNNTGG 3 cut(s) 1010, 1950, 2008
Vha464I CTTAAG 2 cut(s) 2717, 2924
VneI GTGCAC 1 cut(s) 2667
VpaK11BI GGWCC 2 cut(s) 606, 1426
VspI ATTAAT 2 cut(s) 1434, 2961
XagI CCTNNNNNAGG 3 cut(s) 266, 2166, 2720
XapI RAATTY 7 cut(s) 1520, 1754, 2242, 2490, 2819, 2912, 3091
XbaI TCTAGA 1 cut(s) 878
XceI RCATGY 5 cut(s) 232, 1241, 1545, 2835, 3043
XcmI CCANNNNNNNNNTGG 1 cut(s) 184
XhoI CTCGAG 1 cut(s) 34
XmiI GTMKAC 1 cut(s) 45
XmnI GAANNNNTTC 2 cut(s) 999, 2242
Zsp2I ATGCAT 1 cut(s) 1441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.