AMSH-like ubiquitin thioesterase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48790 |
| fragaria_vesca | FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 |
| malus_domestica | MD06G1217700.v1.1 MD14G1227900.v1.1 |
| prunus_persica | Prupe.5G222900_v2.0.a1 |
| pyrus_communis | pycom06g19390 pycom14g18930 |
| rosa_chinensis | RchiOBHm_Chr7g0185701 |
| rosa_laevigata | RLG00000004893 |
| rosa_multiflora | Rmu_sc0004909.1_g000002 Rmu_sc0008747.1_g000004 Rmu_sc0023648.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00268720 |
| rosa_rugosa | Rorug06G0470600 Rorug06G0470700 |
| rosa_samantha | Rh7AG071800 Rh7BG076100 Rh7CG076100 Rh7DG076100 |
| rosa_wichuraiana | Rw7G006340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 138 |
| AciI | CCGC | 2 cut(s) | 124, 136 |
| AclWI | GGATC | 1 cut(s) | 281 |
| AcoI | YGGCCR | 1 cut(s) | 100 |
| AcsI | RAATTY | 1 cut(s) | 80 |
| AcuI | CTGAAG | 1 cut(s) | 95 |
| AflIII | ACRYGT | 1 cut(s) | 40 |
| AgeI | ACCGGT | 1 cut(s) | 143 |
| AgsI | TTSAA | 2 cut(s) | 64, 166 |
| AjnI | CCWGG | 1 cut(s) | 126 |
| AlwI | GGATC | 1 cut(s) | 281 |
| AoxI | GGCC | 1 cut(s) | 100 |
| ApoI | RAATTY | 1 cut(s) | 80 |
| AsiGI | ACCGGT | 1 cut(s) | 143 |
| AsuHPI | GGTGA | 1 cut(s) | 230 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 202, 235 |
| BccI | CCATC | 2 cut(s) | 26, 92 |
| BceAI | ACGGC | 1 cut(s) | 87 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4, 38 |
| BciT130I | CCWGG | 1 cut(s) | 128 |
| BciVI | GTATCC | 1 cut(s) | 203 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BfmI | CTRYAG | 1 cut(s) | 189 |
| BfuI | GTATCC | 1 cut(s) | 203 |
| Bme1390I | CCNGG | 1 cut(s) | 128 |
| BmrFI | CCNGG | 1 cut(s) | 128 |
| BsaBI | GATNNNNATC | 1 cut(s) | 198 |
| BsaJI | CCNNGG | 1 cut(s) | 54 |
| BsaWI | WCCGGW | 1 cut(s) | 143 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 105, 135 |
| Bse118I | RCCGGY | 1 cut(s) | 143 |
| Bse8I | GATNNNNATC | 1 cut(s) | 198 |
| BseBI | CCWGG | 1 cut(s) | 128 |
| BseDI | CCNNGG | 1 cut(s) | 54 |
| BseJI | GATNNNNATC | 1 cut(s) | 198 |
| BseRI | GAGGAG | 1 cut(s) | 71 |
| BshFI | GGCC | 1 cut(s) | 102 |
| BshTI | ACCGGT | 1 cut(s) | 143 |
| BsiSI | CCGG | 1 cut(s) | 144 |
| BsnI | GGCC | 1 cut(s) | 102 |
| Bsp143I | GATC | 2 cut(s) | 185, 273 |
| BspACI | CCGC | 2 cut(s) | 124, 136 |
| BspANI | GGCC | 1 cut(s) | 102 |
| BspMAI | CTGCAG | 1 cut(s) | 193 |
| BspPI | GGATC | 1 cut(s) | 281 |
| BsrBI | CCGCTC | 1 cut(s) | 138 |
| BsrFI | RCCGGY | 1 cut(s) | 143 |
| BssAI | RCCGGY | 1 cut(s) | 143 |
| BssECI | CCNNGG | 1 cut(s) | 54 |
| BssMI | GATC | 2 cut(s) | 185, 273 |
| Bst2UI | CCWGG | 1 cut(s) | 128 |
| BstC8I | GCNNGC | 1 cut(s) | 173 |
| BstKTI | GATC | 2 cut(s) | 188, 276 |
| BstMBI | GATC | 2 cut(s) | 185, 273 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 108 |
| BstNI | CCWGG | 1 cut(s) | 128 |
| BstSCI | CCNGG | 1 cut(s) | 126 |
| BstSFI | CTRYAG | 1 cut(s) | 189 |
| BsuI | GTATCC | 1 cut(s) | 203 |
| BsuRI | GGCC | 1 cut(s) | 102 |
| Cac8I | GCNNGC | 1 cut(s) | 173 |
| Cfr10I | RCCGGY | 1 cut(s) | 143 |
| CseI | GACGC | 1 cut(s) | 159 |
| CspAI | ACCGGT | 1 cut(s) | 143 |
| CviJI | RGCY | 3 cut(s) | 73, 102, 131 |
| CviKI_1 | RGCY | 3 cut(s) | 73, 102, 131 |
| DpnI | GATC | 2 cut(s) | 187, 275 |
| DpnII | GATC | 2 cut(s) | 185, 273 |
| EaeI | YGGCCR | 1 cut(s) | 100 |
| EciI | GGCGGA | 1 cut(s) | 113 |
| Eco57I | CTGAAG | 1 cut(s) | 95 |
| EcoRII | CCWGG | 1 cut(s) | 126 |
| FaiI | YATR | 4 cut(s) | 47, 107, 215, 278 |
| FspBI | CTAG | 1 cut(s) | 27 |
| HaeIII | GGCC | 1 cut(s) | 102 |
| HapII | CCGG | 1 cut(s) | 144 |
| HgaI | GACGC | 1 cut(s) | 159 |
| HpaII | CCGG | 1 cut(s) | 144 |
| HphI | GGTGA | 1 cut(s) | 230 |
| Hpy166II | GTNNAC | 1 cut(s) | 149 |
| Hpy188III | TCNNGA | 3 cut(s) | 166, 203, 271 |
| Hpy8I | GTNNAC | 1 cut(s) | 149 |
| HpyCH4IV | ACGT | 2 cut(s) | 40, 161 |
| HpyCH4V | TGCA | 2 cut(s) | 191, 251 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 108 |
| HpySE526I | ACGT | 2 cut(s) | 40, 161 |
| Kzo9I | GATC | 2 cut(s) | 185, 273 |
| LmnI | GCTCC | 1 cut(s) | 143 |
| LpnPI | CCDG | 6 cut(s) | 101, 113, 140, 157, 157, 256 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MaeII | ACGT | 2 cut(s) | 40, 161 |
| MaeIII | GTNAC | 1 cut(s) | 180 |
| MalI | GATC | 2 cut(s) | 187, 275 |
| MbiI | CCGCTC | 1 cut(s) | 138 |
| MboI | GATC | 2 cut(s) | 185, 273 |
| MboII | GAAGA | 4 cut(s) | 76, 88, 233, 236 |
| MluCI | AATT | 1 cut(s) | 80 |
| MnlI | CCTC | 1 cut(s) | 49 |
| MseI | TTAA | 1 cut(s) | 9 |
| MspI | CCGG | 1 cut(s) | 144 |
| MspR9I | CCNGG | 1 cut(s) | 128 |
| MvaI | CCWGG | 1 cut(s) | 128 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 108 |
| NdeII | GATC | 2 cut(s) | 185, 273 |
| PinAI | ACCGGT | 1 cut(s) | 143 |
| Psp6I | CCWGG | 1 cut(s) | 126 |
| PspGI | CCWGG | 1 cut(s) | 126 |
| PstI | CTGCAG | 1 cut(s) | 193 |
| SaqAI | TTAA | 1 cut(s) | 9 |
| Sau3AI | GATC | 2 cut(s) | 185, 273 |
| ScrFI | CCNGG | 1 cut(s) | 128 |
| SetI | ASST | 4 cut(s) | 43, 164, 220, 240 |
| SfcI | CTRYAG | 1 cut(s) | 189 |
| SgrAI | CRCCGGYG | 1 cut(s) | 143 |
| Sse9I | AATT | 1 cut(s) | 80 |
| SsiI | CCGC | 2 cut(s) | 124, 136 |
| SspMI | CTAG | 1 cut(s) | 27 |
| StyD4I | CCNGG | 1 cut(s) | 126 |
| TaiI | ACGT | 2 cut(s) | 43, 164 |
| TaqI | TCGA | 1 cut(s) | 231 |
| TasI | AATT | 1 cut(s) | 80 |
| Tru1I | TTAA | 1 cut(s) | 9 |
| Tru9I | TTAA | 1 cut(s) | 9 |
| TspGWI | ACGGA | 1 cut(s) | 222 |
| XapI | RAATTY | 1 cut(s) | 80 |
| XspI | CTAG | 1 cut(s) | 27 |