Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0007165

Physical Location & Seq

Genomic Coordinates Forward (+)

30888190 .. 30893574

Gene Structure 5385 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1227900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGAGGTCGTCGTCTTCTTCCGATAGAATTAACATTGCTGCGAGTGCTCAGAGACTCGATGTCGACAATCGGATTCCTCTGCGTATTTACTTTCGGATCGCAAACAATGTCCTCAAGCAGGCTGACATATTTCGACACGAGAAGAATATTATAGACCTATACATTATGCTACTAAGGTTTTCAAGTTTGGTCTCTGAGACAATACCGTGTCATCGAGACTATAGAGCATCTGTTCAAGGAGAGAAGGTTTTCTTGAAAAAGAAATTGTTTGATGCTCTGAATGAGCTCGAGGAGCTCAAGCCAGCAGTGAAACAGAAATTTAAGCCAACAGTGAAACAGAAGAGCGATGAGTTTAACAGAATATATGGAAAGTTGAACAACGGGTGGAGCCATAATCACCAAATTGATTTTGTGGCATCCCCTCTCAAGAAGCAATCTTTGATTAGCTACGATGCAACCAAGGCAGCAGGACCAGCTGCAAGAGAACTTGTCCATCAACCTCTAAGGTCTCAACAATTTTCCTATGCCAGGCCTTTGGAGCATCAATTTCGCAAACTATCCATAGTTCCACGTCCAAATGAGGAAACTCTTTCCAGACATTCTGTTTTGGGCCCAAATGGGCTTAATGGACAGTGGCAGCCACCCAAAAGTGATATAGGGGTTCAGTATCCAAGTATTTTAGACTTGACTCCTGTTGAAATCCCAAGACTGGGGCAGTCCATAGAAGATGAACATACAATTATAAAAGATGAAAAGACAAATATAAATGACGCTAGCGATTTGGAACCTGAAAGGTCAAGTTTGGAACCAATTCTTACCCAGACTACTGATGGTGGCCAGAAGGATTGTACAGCAGAACTTTGCTCCCTCATTTCTTTTGAATCAACAGAAACTCCTGATGATACAAAACTTGTCAGACAGCCTTCTCCTCCGCCTGTTCTTGCGGAAGTACAAGATTTGATCCCAGCAATTTCATCTCAAGCCTCTGAGGTAGAATGTGGACTGGAGACTCTTTCATCAGATGAACTTCGTGCTGAATCTCCCCTGGAATTACATATTTCAACAACAATGATGGAACATTTCATGAAGCTGGCTAAGTCAAATACTGACAAGAGCTTAGAGACTTGTGGCATCCTAGGAGGCTCACTAAAAAACAGAAAATTTTATGTTACAGCTCTCATCATACCCAAACAGGAGTCAACTTCGAATTCGTGTCAGGCCACGAATGAAGAGGAAATATTTGAAGTTCAGGATAAACAATCTCTCTTTCCTCTTGGCTGGATACATACGCATCCTACACAGTCTTGCTTCATGTCGTCGATTGATCTCCATACCCATTATTCATATCAGATTATGTTGCCGGAAGCTGTTGCAATTGTCATGGCACCACAAGGTGGTTCAAGAACCCATGGCATTTTCCGATTGACAAACCCAGGCGGCATGTCAGTCATTAGACAGTGCCAGCACCGTGGTTTTCATCCACACGATCAGCCACCAGACGGTGGACCCATTTACAAGACCTGTGCAGATGTTTATATGAACCCCGATCTAAAGTTTGACGTTATTGATCTTCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016579 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070536 GO:0070646 GO:0070647 GO:0071108 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

JAB USP8_dimer

Protein Analysis

526

Amino Acids

59.06

Weight (kDa)

6.08

Isoelectric Point (pI)

50.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
USP8_dimer	PF08969	12 - 108	7.7e-13	USP8 dimerisation domain
JAB	PF01398	348 - 455	5.8e-18	JAB1/Mov34/MPN/PAD-1 ubiquitin protease
Prok-JAB	PF14464	365 - 447	3.6e-07	Prokaryotic homologs of the JAB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48790
fragaria_vesca	FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880
malus_domestica	MD06G1217700.v1.1 MD14G1227900.v1.1
prunus_persica	Prupe.5G222900_v2.0.a1
pyrus_communis	pycom06g19390 pycom14g18930
rosa_chinensis	RchiOBHm_Chr7g0185701
rosa_laevigata	RLG00000004893
rosa_multiflora	Rmu_sc0004909.1_g000002 Rmu_sc0008747.1_g000004 Rmu_sc0023648.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268720
rosa_rugosa	Rorug06G0470600 Rorug06G0470700
rosa_samantha	Rh7AG071800 Rh7BG076100 Rh7CG076100 Rh7DG076100
rosa_wichuraiana	Rw7G006340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	743
AccB1I	GGYRCC	1 cut(s)	1384
AccB7I	CCANNNNNTGG	2 cut(s)	1394, 1502
AccI	GTMKAC	1 cut(s)	63
AciI	CCGC	3 cut(s)	932, 944, 1437
AclWI	GGATC	2 cut(s)	104, 955
AcoI	YGGCCR	1 cut(s)	835
AcsI	RAATTY	3 cut(s)	317, 1160, 1207
AdeI	CACNNNGTG	1 cut(s)	1394
AfaI	GTAC	2 cut(s)	850, 951
AfiI	CCNNNNNNNGG	7 cut(s)	118, 528, 709, 710, 1394, 1499, 1502
AgsI	TTSAA	9 cut(s)	183, 236, 256, 376, 698, 881, 1062, 1244, 1401
AhdI	GACNNNNNGTC	1 cut(s)	59
AjiI	CACGTC	1 cut(s)	572
AjnI	CCWGG	3 cut(s)	527, 1044, 1432
AluBI	AGCT	8 cut(s)	286, 295, 447, 476, 1090, 1116, 1175, 1367
AluI	AGCT	8 cut(s)	286, 295, 447, 476, 1090, 1116, 1175, 1367
Alw21I	GWGCWC	3 cut(s)	49, 288, 297
Alw26I	GTCTC	7 cut(s)	46, 191, 196, 210, 513, 1001, 1115
AlwI	GGATC	2 cut(s)	104, 955
Ama87I	CYCGRG	1 cut(s)	287
AoxI	GGCC	4 cut(s)	530, 610, 835, 1218
ApaI	GGGCCC	1 cut(s)	614
ApeKI	GCWGC	4 cut(s)	38, 464, 476, 637
ApoI	RAATTY	3 cut(s)	317, 1160, 1207
Asp700I	GAANNNNTTC	2 cut(s)	248, 810
AspA2I	CCTAGG	1 cut(s)	1135
AspS9I	GGNCC	4 cut(s)	470, 610, 611, 1505
AsuHPI	GGTGA	1 cut(s)	389
AsuII	TTCGAA	1 cut(s)	1205
AsuNHI	GCTAGC	1 cut(s)	773
AvaI	CYCGRG	1 cut(s)	287
AvaII	GGWCC	2 cut(s)	470, 1505
AvrII	CCTAGG	1 cut(s)	1135
BaeGI	GKGCMC	1 cut(s)	614
BalI	TGGCCA	1 cut(s)	837
BanI	GGYRCC	1 cut(s)	1384
BanII	GRGCYC	3 cut(s)	288, 297, 614
BauI	CACGAG	1 cut(s)	137
BbsI	GAAGAC	1 cut(s)	6
Bbv12I	GWGCWC	3 cut(s)	49, 288, 297
BbvI	GCAGC	4 cut(s)	25, 463, 476, 649
BccI	CCATC	3 cut(s)	501, 824, 1066
BcgI	CGANNNNNNTGC	2 cut(s)	530, 564
BciT130I	CCWGG	3 cut(s)	529, 1046, 1434
BciVI	GTATCC	2 cut(s)	678, 1275
BcoDI	GTCTC	7 cut(s)	46, 191, 196, 210, 513, 1001, 1115
BfaI	CTAG	2 cut(s)	774, 1136
BfmI	CTRYAG	1 cut(s)	220
BfuI	GTATCC	2 cut(s)	678, 1275
BisI	GCNGC	5 cut(s)	39, 465, 477, 638, 1438
BlnI	CCTAGG	1 cut(s)	1135
BlsI	GCNGC	5 cut(s)	40, 466, 478, 639, 1439
Bme1390I	CCNGG	3 cut(s)	529, 1046, 1434
Bme18I	GGWCC	2 cut(s)	470, 1505
BmeRI	GACNNNNNGTC	1 cut(s)	59
BmeT110I	CYCGRG	1 cut(s)	287
BmgBI	CACGTC	1 cut(s)	572
BmgT120I	GGNCC	4 cut(s)	470, 610, 611, 1505
BmiI	GGNNCC	6 cut(s)	389, 612, 786, 807, 1386, 1507
BmrFI	CCNGG	3 cut(s)	529, 1046, 1434
BmrI	ACTGGG	1 cut(s)	719
BmsI	GCATC	7 cut(s)	236, 262, 425, 442, 550, 1140, 1300
BmtI	GCTAGC	1 cut(s)	777
BmuI	ACTGGG	1 cut(s)	719
BpiI	GAAGAC	1 cut(s)	6
BpmI	CTGGAG	1 cut(s)	1025
Bpu14I	TTCGAA	1 cut(s)	1205
BpuEI	CTTGAG	4 cut(s)	98, 281, 410, 963
BsaI	GGTCTC	2 cut(s)	196, 513
BsaJI	CCNNGG	6 cut(s)	459, 1044, 1135, 1408, 1432, 1468
BsaXI	ACNNNNNCTCC	4 cut(s)	231, 261, 877, 907
Bsc4I	CCNNNNNNNGG	7 cut(s)	118, 528, 709, 710, 1394, 1499, 1502
Bse1I	ACTGG	2 cut(s)	714, 1008
Bse3DI	GCAATG	1 cut(s)	33
BseBI	CCWGG	3 cut(s)	529, 1046, 1434
BseDI	CCNNGG	6 cut(s)	459, 1044, 1135, 1408, 1432, 1468
BseGI	GGATG	4 cut(s)	416, 1131, 1291, 1477
BseLI	CCNNNNNNNGG	7 cut(s)	118, 528, 709, 710, 1394, 1499, 1502
BseMI	GCAATG	1 cut(s)	33
BseMII	CTCAG	3 cut(s)	62, 186, 978
BseNI	ACTGG	2 cut(s)	714, 1008
BseRI	GAGGAG	2 cut(s)	305, 918
BseSI	GKGCMC	1 cut(s)	614
BseXI	GCAGC	4 cut(s)	25, 463, 476, 649
BseYI	CCCAGC	1 cut(s)	964
BsgI	GTGCAG	1 cut(s)	1545
BshFI	GGCC	4 cut(s)	532, 612, 837, 1220
BshNI	GGYRCC	1 cut(s)	1384
BsiHKAI	GWGCWC	3 cut(s)	49, 288, 297
BsiHKCI	CYCGRG	1 cut(s)	287
BsiSI	CCGG	1 cut(s)	1361
BslI	CCNNNNNNNGG	7 cut(s)	118, 528, 709, 710, 1394, 1499, 1502
BsmAI	GTCTC	7 cut(s)	46, 191, 196, 210, 513, 1001, 1115
BsnI	GGCC	4 cut(s)	532, 612, 837, 1220
Bso31I	GGTCTC	2 cut(s)	196, 513
BsoBI	CYCGRG	1 cut(s)	287
Bsp119I	TTCGAA	1 cut(s)	1205
Bsp120I	GGGCCC	1 cut(s)	610
Bsp1286I	GDGCHC	4 cut(s)	49, 288, 297, 614
Bsp1407I	TGTACA	1 cut(s)	848
Bsp143I	GATC	6 cut(s)	96, 960, 1324, 1486, 1546, 1567
Bsp19I	CCATGG	1 cut(s)	1408
BspACI	CCGC	3 cut(s)	932, 944, 1437
BspANI	GGCC	4 cut(s)	532, 612, 837, 1220
BspCNI	CTCAG	3 cut(s)	61, 187, 979
BspHI	TCATGA	1 cut(s)	1083
BspLI	GGNNCC	6 cut(s)	389, 612, 786, 807, 1386, 1507
BspOI	GCTAGC	1 cut(s)	777
BspPI	GGATC	2 cut(s)	104, 955
BspQI	GCTCTTC	1 cut(s)	335
BspT104I	TTCGAA	1 cut(s)	1205
BspT107I	GGYRCC	1 cut(s)	1384
BspTNI	GGTCTC	2 cut(s)	196, 513
BsrDI	GCAATG	1 cut(s)	33
BsrGI	TGTACA	1 cut(s)	848
BsrI	ACTGG	2 cut(s)	714, 1008
BssECI	CCNNGG	6 cut(s)	459, 1044, 1135, 1408, 1432, 1468
BssMI	GATC	6 cut(s)	96, 960, 1324, 1486, 1546, 1567
BssSI	CACGAG	1 cut(s)	137
BssT1I	CCWWGG	3 cut(s)	459, 1135, 1408
Bst2BI	CACGAG	1 cut(s)	137
Bst2UI	CCWGG	3 cut(s)	529, 1046, 1434
Bst4CI	ACNGT	7 cut(s)	207, 331, 633, 1302, 1458, 1469, 1502
Bst6I	CTCTTC	2 cut(s)	335, 1224
BstAUI	TGTACA	1 cut(s)	848
BstBI	TTCGAA	1 cut(s)	1205
BstC8I	GCNNGC	5 cut(s)	120, 303, 775, 1092, 1463
BstDEI	CTNAG	7 cut(s)	48, 173, 195, 503, 987, 1095, 1117
BstDSI	CCRYGG	2 cut(s)	1408, 1468
BstENI	CCTNNNNNAGG	2 cut(s)	116, 526
BstF5I	GGATG	4 cut(s)	416, 1131, 1291, 1477
BstKTI	GATC	6 cut(s)	99, 963, 1327, 1489, 1549, 1570
BstMAI	GTCTC	7 cut(s)	46, 191, 196, 210, 513, 1001, 1115
BstMBI	GATC	6 cut(s)	96, 960, 1324, 1486, 1546, 1567
BstMWI	GCNNNNNNNGC	5 cut(s)	44, 292, 461, 473, 538
BstNI	CCWGG	3 cut(s)	529, 1046, 1434
BstNSI	RCATGY	1 cut(s)	1444
BstSCI	CCNGG	3 cut(s)	527, 1044, 1432
BstSFI	CTRYAG	1 cut(s)	220
BstSLI	GKGCMC	1 cut(s)	614
BstV1I	GCAGC	4 cut(s)	25, 463, 476, 649
BstV2I	GAAGAC	1 cut(s)	6
BstXI	CCANNNNNNTGG	2 cut(s)	535, 1469
BsuI	GTATCC	2 cut(s)	678, 1275
BsuRI	GGCC	4 cut(s)	532, 612, 837, 1220
BtgI	CCRYGG	2 cut(s)	1408, 1468
BtgZI	GCGATG	1 cut(s)	360
BtrI	CACGTC	1 cut(s)	572
BtsCI	GGATG	4 cut(s)	416, 1131, 1291, 1477
BtsI	GCAGTG	1 cut(s)	312
BtsIMutI	CAGTG	4 cut(s)	312, 336, 638, 1463
Cac8I	GCNNGC	5 cut(s)	120, 303, 775, 1092, 1463
CciI	TCATGA	1 cut(s)	1083
Cfr13I	GGNCC	4 cut(s)	470, 610, 611, 1505
CseI	GACGC	1 cut(s)	779
Csp6I	GTAC	2 cut(s)	849, 950
CviAII	CATG	5 cut(s)	1084, 1312, 1381, 1409, 1441
CviQI	GTAC	2 cut(s)	849, 950
DdeI	CTNAG	7 cut(s)	48, 173, 195, 503, 987, 1095, 1117
DpnI	GATC	6 cut(s)	98, 962, 1326, 1488, 1548, 1569
DpnII	GATC	6 cut(s)	96, 960, 1324, 1486, 1546, 1567
DraIII	CACNNNGTG	1 cut(s)	1394
DriI	GACNNNNNGTC	1 cut(s)	59
EaeI	YGGCCR	1 cut(s)	835
Eam1104I	CTCTTC	2 cut(s)	335, 1224
Eam1105I	GACNNNNNGTC	1 cut(s)	59
EarI	CTCTTC	2 cut(s)	335, 1224
EciI	GGCGGA	1 cut(s)	921
Ecl136II	GAGCTC	2 cut(s)	286, 295
Eco130I	CCWWGG	3 cut(s)	459, 1135, 1408
Eco147I	AGGCCT	1 cut(s)	532
Eco24I	GRGCYC	3 cut(s)	288, 297, 614
Eco31I	GGTCTC	2 cut(s)	196, 513
Eco47I	GGWCC	2 cut(s)	470, 1505
Eco53kI	GAGCTC	2 cut(s)	286, 295
Eco88I	CYCGRG	1 cut(s)	287
EcoICRI	GAGCTC	2 cut(s)	286, 295
EcoNI	CCTNNNNNAGG	2 cut(s)	116, 526
EcoRI	GAATTC	1 cut(s)	1207
EcoRII	CCWGG	3 cut(s)	527, 1044, 1432
EcoT14I	CCWWGG	3 cut(s)	459, 1135, 1408
EcoT38I	GRGCYC	3 cut(s)	288, 297, 614
ErhI	CCWWGG	3 cut(s)	459, 1135, 1408
FaeI	CATG	5 cut(s)	1087, 1315, 1384, 1412, 1444
FalI	AAGNNNNNCTT	2 cut(s)	236, 268
FatI	CATG	5 cut(s)	1083, 1311, 1380, 1408, 1440
FblI	GTMKAC	1 cut(s)	63
Fnu4HI	GCNGC	5 cut(s)	39, 465, 477, 638, 1438
FokI	GGATG	4 cut(s)	403, 1118, 1278, 1464
FriOI	GRGCYC	3 cut(s)	288, 297, 614
Fsp4HI	GCNGC	5 cut(s)	39, 465, 477, 638, 1438
FspBI	CTAG	2 cut(s)	774, 1136
GluI	GCNGC	5 cut(s)	39, 465, 477, 638, 1438
GsaI	CCCAGC	1 cut(s)	968
GsuI	CTGGAG	1 cut(s)	1025
HaeIII	GGCC	4 cut(s)	532, 612, 837, 1220
HapII	CCGG	1 cut(s)	1361
HgaI	GACGC	1 cut(s)	779
Hin1II	CATG	5 cut(s)	1087, 1315, 1384, 1412, 1444
HincII	GTYRAC	2 cut(s)	64, 1200
HindII	GTYRAC	2 cut(s)	64, 1200
HinfI	GANTC	7 cut(s)	54, 73, 688, 881, 1009, 1037, 1196
HpaII	CCGG	1 cut(s)	1361
HphI	GGTGA	1 cut(s)	389
Hpy166II	GTNNAC	4 cut(s)	64, 1001, 1200, 1505
Hpy188III	TCNNGA	8 cut(s)	215, 253, 427, 594, 896, 1084, 1250, 1401
Hpy8I	GTNNAC	4 cut(s)	64, 1001, 1200, 1505
Hpy99I	CGWCG	2 cut(s)	13, 1321
HpyAV	CCTTC	3 cut(s)	238, 835, 933
HpyCH4III	ACNGT	7 cut(s)	207, 331, 633, 1302, 1458, 1469, 1502
HpyCH4IV	ACGT	2 cut(s)	571, 1560
HpyCH4V	TGCA	4 cut(s)	455, 479, 1373, 1526
HpyF10VI	GCNNNNNNNGC	5 cut(s)	44, 292, 461, 473, 538
HpyF3I	CTNAG	7 cut(s)	48, 173, 195, 503, 987, 1095, 1117
HpySE526I	ACGT	2 cut(s)	571, 1560
Hsp92II	CATG	5 cut(s)	1087, 1315, 1384, 1412, 1444
Kzo9I	GATC	6 cut(s)	96, 960, 1324, 1486, 1546, 1567
LguI	GCTCTTC	1 cut(s)	335
LmnI	GCTCC	4 cut(s)	292, 387, 538, 869
Lsp1109I	GCAGC	4 cut(s)	25, 463, 476, 649
LweI	GCATC	7 cut(s)	236, 262, 425, 442, 550, 1140, 1300
MaeI	CTAG	2 cut(s)	774, 1136
MaeII	ACGT	2 cut(s)	571, 1560
MaeIII	GTNAC	1 cut(s)	1168
MalI	GATC	6 cut(s)	98, 962, 1326, 1488, 1548, 1569
MboI	GATC	6 cut(s)	96, 960, 1324, 1486, 1546, 1567
MboII	GAAGA	7 cut(s)	6, 9, 154, 352, 737, 1241, 1562
MfeI	CAATTG	1 cut(s)	1374
MhlI	GDGCHC	4 cut(s)	49, 288, 297, 614
MlsI	TGGCCA	1 cut(s)	837
MluNI	TGGCCA	1 cut(s)	837
MlyI	GAGTC	4 cut(s)	48, 682, 1003, 1205
Mox20I	TGGCCA	1 cut(s)	837
MroXI	GAANNNNTTC	2 cut(s)	248, 810
MscI	TGGCCA	1 cut(s)	837
MseI	TTAA	4 cut(s)	30, 321, 354, 624
Msp20I	TGGCCA	1 cut(s)	837
MspA1I	CMGCKG	1 cut(s)	476
MspI	CCGG	1 cut(s)	1361
MspR9I	CCNGG	3 cut(s)	529, 1046, 1434
MunI	CAATTG	1 cut(s)	1374
MvaI	CCWGG	3 cut(s)	529, 1046, 1434
MwoI	GCNNNNNNNGC	5 cut(s)	44, 292, 461, 473, 538
NcoI	CCATGG	1 cut(s)	1408
NdeII	GATC	6 cut(s)	96, 960, 1324, 1486, 1546, 1567
NheI	GCTAGC	1 cut(s)	773
NlaIII	CATG	5 cut(s)	1087, 1315, 1384, 1412, 1444
NlaIV	GGNNCC	6 cut(s)	389, 612, 786, 807, 1386, 1507
NspI	RCATGY	1 cut(s)	1444
NspV	TTCGAA	1 cut(s)	1205
PaeR7I	CTCGAG	1 cut(s)	287
PagI	TCATGA	1 cut(s)	1083
PceI	AGGCCT	1 cut(s)	532
PciSI	GCTCTTC	1 cut(s)	335
PdmI	GAANNNNTTC	2 cut(s)	248, 810
PfeI	GAWTC	3 cut(s)	73, 881, 1037
PflMI	CCANNNNNTGG	2 cut(s)	1394, 1502
PkrI	GCNGC	5 cut(s)	40, 466, 478, 639, 1439
PleI	GAGTC	4 cut(s)	48, 682, 1003, 1204
PpsI	GAGTC	4 cut(s)	48, 682, 1003, 1204
PsiI	TTATAA	1 cut(s)	743
Psp124BI	GAGCTC	2 cut(s)	288, 297
Psp6I	CCWGG	3 cut(s)	527, 1044, 1432
PspFI	CCCAGC	1 cut(s)	964
PspGI	CCWGG	3 cut(s)	527, 1044, 1432
PspN4I	GGNNCC	6 cut(s)	389, 612, 786, 807, 1386, 1507
PspOMI	GGGCCC	1 cut(s)	610
PspPI	GGNCC	4 cut(s)	470, 610, 611, 1505
PspXI	VCTCGAGB	1 cut(s)	287
PvuII	CAGCTG	1 cut(s)	476
RsaI	GTAC	2 cut(s)	850, 951
RsaNI	GTAC	2 cut(s)	849, 950
SacI	GAGCTC	2 cut(s)	288, 297
SalI	GTCGAC	1 cut(s)	62
SapI	GCTCTTC	1 cut(s)	335
SaqAI	TTAA	4 cut(s)	30, 321, 354, 624
SatI	GCNGC	5 cut(s)	39, 465, 477, 638, 1438
Sau3AI	GATC	6 cut(s)	96, 960, 1324, 1486, 1546, 1567
Sau96I	GGNCC	4 cut(s)	470, 610, 611, 1505
SchI	GAGTC	4 cut(s)	48, 682, 1003, 1205
ScrFI	CCNGG	3 cut(s)	529, 1046, 1434
SduI	GDGCHC	4 cut(s)	49, 288, 297, 614
SfaNI	GCATC	7 cut(s)	236, 262, 425, 442, 550, 1140, 1300
SfcI	CTRYAG	1 cut(s)	220
Sfr274I	CTCGAG	1 cut(s)	287
SfuI	TTCGAA	1 cut(s)	1205
SinI	GGWCC	2 cut(s)	470, 1505
SlaI	CTCGAG	1 cut(s)	287
SmlI	CTYRAG	5 cut(s)	113, 287, 296, 425, 978
SmoI	CTYRAG	5 cut(s)	113, 287, 296, 425, 978
SseBI	AGGCCT	1 cut(s)	532
SsiI	CCGC	3 cut(s)	932, 944, 1437
SspI	AATATT	2 cut(s)	148, 1239
SspMI	CTAG	2 cut(s)	774, 1136
SstI	GAGCTC	2 cut(s)	288, 297
StuI	AGGCCT	1 cut(s)	532
StyD4I	CCNGG	3 cut(s)	527, 1044, 1432
StyI	CCWWGG	3 cut(s)	459, 1135, 1408
TaaI	ACNGT	7 cut(s)	207, 331, 633, 1302, 1458, 1469, 1502
TaiI	ACGT	2 cut(s)	574, 1563
TaqI	TCGA	8 cut(s)	57, 63, 133, 214, 288, 1205, 1319, 1573
TatI	WGTACW	2 cut(s)	848, 949
TauI	GCSGC	1 cut(s)	1440
TfiI	GAWTC	3 cut(s)	73, 881, 1037
Tru1I	TTAA	4 cut(s)	30, 321, 354, 624
Tru9I	TTAA	4 cut(s)	30, 321, 354, 624
TscAI	CASTG	4 cut(s)	312, 336, 638, 1463
TseI	GCWGC	4 cut(s)	38, 464, 476, 637
TspRI	CASTG	4 cut(s)	312, 336, 638, 1463
Van91I	CCANNNNNTGG	2 cut(s)	1394, 1502
VpaK11BI	GGWCC	2 cut(s)	470, 1505
XagI	CCTNNNNNAGG	2 cut(s)	116, 526
XapI	RAATTY	3 cut(s)	317, 1160, 1207
XceI	RCATGY	1 cut(s)	1444
XcmI	CCANNNNNNNNNTGG	1 cut(s)	827
XhoI	CTCGAG	1 cut(s)	287
XmaJI	CCTAGG	1 cut(s)	1135
XmiI	GTMKAC	1 cut(s)	63
XmnI	GAANNNNTTC	2 cut(s)	248, 810
XspI	CTAG	2 cut(s)	774, 1136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.