Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0007165

Physical Location & Seq

Genomic Coordinates Forward (+)

5931586 .. 5938772

Gene Structure 7187 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG076100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGAGGTCGTCGTCGTCGTCTTGCTCGGATAGAATAGACATTGCCGCCAACGCTCAGAGGCTCGATGTCGACCATCGGATTTCGCTGCGTATCTACTTTCGGATCGCTAACACTCTTCTCAAACAGGCTGATATATTTCGACAAGAGAGGAATATTATAGACCTTTATGTCATGCTCCTAAGATTTTCGAGTTTGGCCTCCGAGACGATACCGTGTCATCGAGACTATAGAACATCTGTTCAAAGTGAAAAGGATATTTTGAAAATGAAATTGTTGAATGCTCTCTGTGAACTGGAGAAATTAAAGCCAGCAGTGAAACAGAAGAATGATGAGTTTAACAGGAGAAATGCATATCAAAACAACGGGTGGGGCCATAATCATCAAATTCAAGCTCCTCCGAAGAAGCAAAATTTGATTAGTTATGACATAAACAAGGCAGCAAATCCAGCTTCAAAAGCACAGTTCTATCAAAATCCAGGGACTCAGTTTTCATATGCCAGGCCCATGGAGGAGCAATTTCGCAAACTATCCATAAATCTTCGGCCTCCAAAGGTGGATACTCTTTCCAAACATTCAATTTTGGGCCCAAATGGGCTTTATGGGCAGTGGCAGCCACCTAAAATTGATATAGGGGTTCAATATCCAAGCATTGTAGACTTGACTCCTCTTGAAATCCCAAGTCTGGAACAGTCCATAGAAGGCAAAAATGCGACTTTAAGCAATTCGGAACATGAAAGACCAAGTTTAGAACCGATTCCTACCCAGAGTAGTAACGATGGTCAGATACCTCGTACTGAGGAACCTTCCCTTATTTCCTTCGAATCAATAGAACCTCCTGAACATGCACAACTTATCAGACAGCCTTCTCCTCCACCTGTACTTGCTGAAGTGCAAGATTTGATCCCAGCAATTTCACCCCAAGTCTCTGCGGTAGAAAGTGAATTGGAGACTCTGTCATCAGATGAATTTCTTCGCGCTGAATCTCCCCTGCAATTGCACATTTCAACAACGATGATGGATCATTTCTTGAAGTTAGCAAAGTCAAATACTAAAAAGGACTTAGAAACTTGTGGCATTCTAGCTGGTTCACTTAAAAACAGAAAGTTTTATGTTACAGCTCTCATCATACCAAAGCAAGAGTCAACGGCAAATTCTTGCCAGGCCACGCATGAAGAGGAGATATTTGAAGTTCAGGACAAACGATCTCTCTTCCCTCTTGGCTGGATACATACTCATCCTACACAGTCTTGTTTCATGTCGTCGATTGATGTTCACACGCATTATTCTTATCAGATTATGTTGCCCGAAGCTGTTGCAATTGTCATGGCACCAAGAGATAGTGCAAGAACCCATGGCATTTTCCGATTGACAACCCCGGGTGGCATGTCAGTCATTAGAAAGTGCCCGCAGCGTGGTTTTCATTCACATGATCAGCCACCAGATGGTGGGCCAATTTACAACACCTGTACAGATGTTTATATGAGCCCAAATCTTAAATTTGACGTCATCGATCTTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016579 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070536 GO:0070646 GO:0070647 GO:0071108 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

JAB USP8_dimer

Protein Analysis

506

Amino Acids

57.17

Weight (kDa)

6.64

Isoelectric Point (pI)

58.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
USP8_dimer	PF08969	13 - 107	3.4e-12	USP8 dimerisation domain
JAB	PF01398	328 - 436	1.7e-18	JAB1/Mov34/MPN/PAD-1 ubiquitin protease
Prok-JAB	PF14464	347 - 429	2.8e-07	Prokaryotic homologs of the JAB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48790
fragaria_vesca	FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880 FvH4_5g11880
malus_domestica	MD06G1217700.v1.1 MD14G1227900.v1.1
prunus_persica	Prupe.5G222900_v2.0.a1
pyrus_communis	pycom06g19390 pycom14g18930
rosa_chinensis	RchiOBHm_Chr7g0185701
rosa_laevigata	RLG00000004893
rosa_multiflora	Rmu_sc0004909.1_g000002 Rmu_sc0008747.1_g000004 Rmu_sc0023648.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268720
rosa_rugosa	Rorug06G0470600 Rorug06G0470700
rosa_samantha	Rh7AG071800 Rh7BG076100 Rh7CG076100 Rh7DG076100
rosa_wichuraiana	Rw7G006340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	167
AatII	GACGTC	1 cut(s)	1506
AccB1I	GGYRCC	1 cut(s)	1327
AccB7I	CCANNNNNTGG	2 cut(s)	1442, 1445
AccI	GTMKAC	2 cut(s)	69, 654
AccII	CGCG	1 cut(s)	975
AciI	CCGC	3 cut(s)	45, 929, 1406
AclWI	GGATC	3 cut(s)	110, 895, 1026
AcsI	RAATTY	5 cut(s)	384, 409, 965, 1150, 1496
AcuI	CTGAAG	1 cut(s)	906
AcyI	GRCGYC	1 cut(s)	1503
AfaI	GTAC	3 cut(s)	793, 879, 1468
AfiI	CCNNNNNNNGG	4 cut(s)	682, 1412, 1442, 1445
AjnI	CCWGG	3 cut(s)	475, 497, 1158
AluBI	AGCT	5 cut(s)	392, 449, 1082, 1118, 1310
AluI	AGCT	5 cut(s)	392, 449, 1082, 1118, 1310
Alw26I	GTCTC	4 cut(s)	197, 216, 928, 941
AlwI	GGATC	3 cut(s)	110, 895, 1026
Ama87I	CYCGRG	1 cut(s)	1375
AoxI	GGCC	7 cut(s)	195, 370, 500, 542, 583, 1161, 1448
ApaI	GGGCCC	1 cut(s)	587
ApeKI	GCWGC	4 cut(s)	85, 437, 610, 1408
ApoI	RAATTY	5 cut(s)	384, 409, 965, 1150, 1496
ArsI	GACNNNNNNTTYG	2 cut(s)	1124, 1156
Asp700I	GAANNNNTTC	2 cut(s)	753, 969
AspLEI	GCGC	1 cut(s)	977
AspS9I	GGNCC	5 cut(s)	370, 501, 583, 584, 1448
AsuC2I	CCSGG	2 cut(s)	1376, 1377
AsuHPI	GGTGA	1 cut(s)	906
AsuII	TTCGAA	1 cut(s)	819
AvaI	CYCGRG	1 cut(s)	1375
BaeGI	GKGCMC	2 cut(s)	587, 1406
BanI	GGYRCC	1 cut(s)	1327
BanII	GRGCYC	2 cut(s)	587, 1487
BbvI	GCAGC	4 cut(s)	72, 449, 622, 1420
BccI	CCATC	4 cut(s)	81, 770, 1009, 1436
BceAI	ACGGC	1 cut(s)	1161
BcgI	CGANNNNNNTGC	2 cut(s)	1295, 1329
BciT130I	CCWGG	3 cut(s)	477, 499, 1160
BciVI	GTATCC	2 cut(s)	550, 1218
BclI	TGATCA	1 cut(s)	1429
BcnI	CCSGG	2 cut(s)	1376, 1377
BcoDI	GTCTC	4 cut(s)	197, 216, 928, 941
BfaI	CTAG	1 cut(s)	1079
BfmI	CTRYAG	1 cut(s)	226
BfuI	GTATCC	2 cut(s)	550, 1218
BisI	GCNGC	5 cut(s)	45, 86, 438, 611, 1409
BlsI	GCNGC	5 cut(s)	46, 87, 439, 612, 1410
Bme1390I	CCNGG	5 cut(s)	477, 499, 1160, 1376, 1377
BmeT110I	CYCGRG	1 cut(s)	1375
BmgT120I	GGNCC	5 cut(s)	370, 501, 583, 584, 1448
BmiI	GGNNCC	4 cut(s)	371, 585, 801, 1329
BmrFI	CCNGG	5 cut(s)	477, 499, 1160, 1376, 1377
BpmI	CTGGAG	1 cut(s)	314
Bpu14I	TTCGAA	1 cut(s)	819
BpuMI	CCSGG	2 cut(s)	1376, 1377
Bsa29I	ATCGAT	1 cut(s)	1509
BsaHI	GRCGYC	1 cut(s)	1503
BsaJI	CCNNGG	5 cut(s)	476, 504, 1351, 1374, 1375
BsaXI	ACNNNNNCTCC	2 cut(s)	938, 968
Bsc4I	CCNNNNNNNGG	4 cut(s)	682, 1412, 1442, 1445
Bse1I	ACTGG	1 cut(s)	297
Bse3DI	GCAATG	1 cut(s)	39
BseBI	CCWGG	3 cut(s)	477, 499, 1160
BseCI	ATCGAT	1 cut(s)	1509
BseDI	CCNNGG	5 cut(s)	476, 504, 1351, 1374, 1375
BseGI	GGATG	1 cut(s)	1234
BseLI	CCNNNNNNNGG	4 cut(s)	682, 1412, 1442, 1445
BseMI	GCAATG	1 cut(s)	39
BseMII	CTCAG	3 cut(s)	68, 497, 786
BseNI	ACTGG	1 cut(s)	297
BseRI	GAGGAG	5 cut(s)	384, 524, 654, 858, 1190
BseSI	GKGCMC	2 cut(s)	587, 1406
BseXI	GCAGC	4 cut(s)	72, 449, 622, 1420
BseYI	CCCAGC	1 cut(s)	904
Bsh1236I	CGCG	1 cut(s)	975
BshFI	GGCC	7 cut(s)	197, 372, 502, 544, 585, 1163, 1450
BshNI	GGYRCC	1 cut(s)	1327
BshVI	ATCGAT	1 cut(s)	1509
BsiHKCI	CYCGRG	1 cut(s)	1375
BsiSI	CCGG	1 cut(s)	1376
BslFI	GGGAC	1 cut(s)	493
BslI	CCNNNNNNNGG	4 cut(s)	682, 1412, 1442, 1445
BsmAI	GTCTC	4 cut(s)	197, 216, 928, 941
BsmBI	CGTCTC	1 cut(s)	197
BsmFI	GGGAC	1 cut(s)	493
BsmI	GAATGC	2 cut(s)	283, 1074
BsnI	GGCC	7 cut(s)	197, 372, 502, 544, 585, 1163, 1450
BsoBI	CYCGRG	1 cut(s)	1375
Bsp119I	TTCGAA	1 cut(s)	819
Bsp120I	GGGCCC	1 cut(s)	583
Bsp1286I	GDGCHC	3 cut(s)	587, 1406, 1487
Bsp1407I	TGTACA	1 cut(s)	1466
Bsp143I	GATC	6 cut(s)	102, 900, 1018, 1202, 1429, 1510
Bsp19I	CCATGG	2 cut(s)	504, 1351
BspACI	CCGC	3 cut(s)	45, 929, 1406
BspANI	GGCC	7 cut(s)	197, 372, 502, 544, 585, 1163, 1450
BspCNI	CTCAG	3 cut(s)	67, 496, 787
BspDI	ATCGAT	1 cut(s)	1509
BspFNI	CGCG	1 cut(s)	975
BspLI	GGNNCC	4 cut(s)	371, 585, 801, 1329
BspPI	GGATC	3 cut(s)	110, 895, 1026
BspT104I	TTCGAA	1 cut(s)	819
BspT107I	GGYRCC	1 cut(s)	1327
BsrDI	GCAATG	1 cut(s)	39
BsrGI	TGTACA	1 cut(s)	1466
BsrI	ACTGG	1 cut(s)	297
BssECI	CCNNGG	5 cut(s)	476, 504, 1351, 1374, 1375
BssMI	GATC	6 cut(s)	102, 900, 1018, 1202, 1429, 1510
BssNI	GRCGYC	1 cut(s)	1503
BssT1I	CCWWGG	2 cut(s)	504, 1351
Bst2UI	CCWGG	3 cut(s)	477, 499, 1160
Bst4CI	ACNGT	4 cut(s)	213, 462, 690, 1245
Bst6I	CTCTTC	3 cut(s)	120, 1167, 1214
BstACI	GRCGYC	1 cut(s)	1503
BstAUI	TGTACA	1 cut(s)	1466
BstBI	TTCGAA	1 cut(s)	819
BstC8I	GCNNGC	2 cut(s)	309, 1406
BstDEI	CTNAG	5 cut(s)	54, 179, 483, 795, 1060
BstDSI	CCRYGG	2 cut(s)	504, 1351
BstF5I	GGATG	1 cut(s)	1234
BstFNI	CGCG	1 cut(s)	975
BstHHI	GCGC	1 cut(s)	977
BstKTI	GATC	6 cut(s)	105, 903, 1021, 1205, 1432, 1513
BstMAI	GTCTC	4 cut(s)	197, 216, 928, 941
BstMBI	GATC	6 cut(s)	102, 900, 1018, 1202, 1429, 1510
BstMWI	GCNNNNNNNGC	5 cut(s)	50, 446, 455, 601, 610
BstNI	CCWGG	3 cut(s)	477, 499, 1160
BstNSI	RCATGY	2 cut(s)	845, 1387
BstSCI	CCNGG	5 cut(s)	475, 497, 1158, 1374, 1375
BstSFI	CTRYAG	1 cut(s)	226
BstSLI	GKGCMC	2 cut(s)	587, 1406
BstUI	CGCG	1 cut(s)	975
BstV1I	GCAGC	4 cut(s)	72, 449, 622, 1420
BstXI	CCANNNNNNTGG	1 cut(s)	505
Bsu15I	ATCGAT	1 cut(s)	1509
BsuI	GTATCC	2 cut(s)	550, 1218
BsuRI	GGCC	7 cut(s)	197, 372, 502, 544, 585, 1163, 1450
BsuTUI	ATCGAT	1 cut(s)	1509
BtgI	CCRYGG	2 cut(s)	504, 1351
BtsCI	GGATG	1 cut(s)	1234
BtsI	GCAGTG	2 cut(s)	318, 611
BtsIMutI	CAGTG	2 cut(s)	318, 611
Cac8I	GCNNGC	2 cut(s)	309, 1406
CfoI	GCGC	1 cut(s)	977
Cfr13I	GGNCC	5 cut(s)	370, 501, 583, 584, 1448
Cfr9I	CCCGGG	1 cut(s)	1375
ClaI	ATCGAT	1 cut(s)	1509
Csp6I	GTAC	3 cut(s)	792, 878, 1467
CviQI	GTAC	3 cut(s)	792, 878, 1467
DdeI	CTNAG	5 cut(s)	54, 179, 483, 795, 1060
DpnI	GATC	6 cut(s)	104, 902, 1020, 1204, 1431, 1512
DpnII	GATC	6 cut(s)	102, 900, 1018, 1202, 1429, 1510
DrdI	GACNNNNNNGTC	1 cut(s)	167
DseDI	GACNNNNNNGTC	1 cut(s)	167
Eam1104I	CTCTTC	3 cut(s)	120, 1167, 1214
EarI	CTCTTC	3 cut(s)	120, 1167, 1214
Eco130I	CCWWGG	2 cut(s)	504, 1351
Eco24I	GRGCYC	2 cut(s)	587, 1487
Eco57I	CTGAAG	1 cut(s)	906
Eco88I	CYCGRG	1 cut(s)	1375
EcoRII	CCWGG	3 cut(s)	475, 497, 1158
EcoT14I	CCWWGG	2 cut(s)	504, 1351
EcoT22I	ATGCAT	1 cut(s)	352
EcoT38I	GRGCYC	2 cut(s)	587, 1487
ErhI	CCWWGG	2 cut(s)	504, 1351
Esp3I	CGTCTC	1 cut(s)	197
FaqI	GGGAC	1 cut(s)	493
FauI	CCCGC	1 cut(s)	1413
FauNDI	CATATG	1 cut(s)	493
FbaI	TGATCA	1 cut(s)	1429
FblI	GTMKAC	2 cut(s)	69, 654
Fnu4HI	GCNGC	5 cut(s)	45, 86, 438, 611, 1409
FokI	GGATG	1 cut(s)	1221
FriOI	GRGCYC	2 cut(s)	587, 1487
Fsp4HI	GCNGC	5 cut(s)	45, 86, 438, 611, 1409
FspBI	CTAG	1 cut(s)	1079
GlaI	GCGC	1 cut(s)	976
GluI	GCNGC	5 cut(s)	45, 86, 438, 611, 1409
GsaI	CCCAGC	1 cut(s)	908
GsuI	CTGGAG	1 cut(s)	314
HaeIII	GGCC	7 cut(s)	197, 372, 502, 544, 585, 1163, 1450
HapII	CCGG	1 cut(s)	1376
HhaI	GCGC	1 cut(s)	977
Hin1I	GRCGYC	1 cut(s)	1503
Hin6I	GCGC	1 cut(s)	975
HinP1I	GCGC	1 cut(s)	975
HincII	GTYRAC	2 cut(s)	70, 1143
HindII	GTYRAC	2 cut(s)	70, 1143
HinfI	GANTC	7 cut(s)	481, 661, 754, 821, 949, 980, 1139
HpaII	CCGG	1 cut(s)	1376
HphI	GGTGA	1 cut(s)	906
Hpy166II	GTNNAC	6 cut(s)	70, 290, 655, 1088, 1143, 1273
Hpy188III	TCNNGA	6 cut(s)	221, 668, 683, 836, 1027, 1193
Hpy8I	GTNNAC	6 cut(s)	70, 290, 655, 1088, 1143, 1273
Hpy99I	CGWCG	4 cut(s)	13, 16, 19, 1264
HpyAV	CCTTC	4 cut(s)	692, 813, 826, 873
HpyCH4III	ACNGT	4 cut(s)	213, 462, 690, 1245
HpyCH4IV	ACGT	1 cut(s)	1503
HpyCH4V	TGCA	7 cut(s)	350, 845, 892, 991, 997, 1316, 1343
HpyF10VI	GCNNNNNNNGC	5 cut(s)	50, 446, 455, 601, 610
HpyF3I	CTNAG	5 cut(s)	54, 179, 483, 795, 1060
HpySE526I	ACGT	1 cut(s)	1503
Hsp92I	GRCGYC	1 cut(s)	1503
HspAI	GCGC	1 cut(s)	975
Ksp22I	TGATCA	1 cut(s)	1429
Kzo9I	GATC	6 cut(s)	102, 900, 1018, 1202, 1429, 1510
LmnI	GCTCC	3 cut(s)	180, 397, 511
Lsp1109I	GCAGC	4 cut(s)	72, 449, 622, 1420
MaeI	CTAG	1 cut(s)	1079
MaeII	ACGT	1 cut(s)	1503
MaeIII	GTNAC	2 cut(s)	770, 1111
MalI	GATC	6 cut(s)	104, 902, 1020, 1204, 1431, 1512
MboI	GATC	6 cut(s)	102, 900, 1018, 1202, 1429, 1510
MboII	GAAGA	8 cut(s)	107, 334, 412, 530, 962, 1184, 1201, 1505
MfeI	CAATTG	2 cut(s)	992, 1317
MhlI	GDGCHC	3 cut(s)	587, 1406, 1487
MlyI	GAGTC	4 cut(s)	475, 655, 943, 1148
Mph1103I	ATGCAT	1 cut(s)	352
MroXI	GAANNNNTTC	2 cut(s)	753, 969
MseI	TTAA	5 cut(s)	302, 336, 716, 1092, 1494
MslI	CAYNNNNRTG	1 cut(s)	1425
MspI	CCGG	1 cut(s)	1376
MspR9I	CCNGG	5 cut(s)	477, 499, 1160, 1376, 1377
MunI	CAATTG	2 cut(s)	992, 1317
Mva1269I	GAATGC	2 cut(s)	283, 1074
MvaI	CCWGG	3 cut(s)	477, 499, 1160
MvnI	CGCG	1 cut(s)	975
MwoI	GCNNNNNNNGC	5 cut(s)	50, 446, 455, 601, 610
NciI	CCSGG	2 cut(s)	1376, 1377
NcoI	CCATGG	2 cut(s)	504, 1351
NdeI	CATATG	1 cut(s)	493
NdeII	GATC	6 cut(s)	102, 900, 1018, 1202, 1429, 1510
NlaIV	GGNNCC	4 cut(s)	371, 585, 801, 1329
NsiI	ATGCAT	1 cut(s)	352
NspI	RCATGY	2 cut(s)	845, 1387
NspV	TTCGAA	1 cut(s)	819
PcsI	WCGNNNNNNNCGW	1 cut(s)	14
PctI	GAATGC	2 cut(s)	283, 1074
PdmI	GAANNNNTTC	2 cut(s)	753, 969
PfeI	GAWTC	3 cut(s)	754, 821, 980
PflFI	GACNNNGTC	1 cut(s)	952
PflMI	CCANNNNNTGG	2 cut(s)	1442, 1445
PkrI	GCNGC	5 cut(s)	46, 87, 439, 612, 1410
PleI	GAGTC	4 cut(s)	475, 655, 943, 1147
PpsI	GAGTC	4 cut(s)	475, 655, 943, 1147
Psp6I	CCWGG	3 cut(s)	475, 497, 1158
PspFI	CCCAGC	1 cut(s)	904
PspGI	CCWGG	3 cut(s)	475, 497, 1158
PspN4I	GGNNCC	4 cut(s)	371, 585, 801, 1329
PspOMI	GGGCCC	1 cut(s)	583
PspPI	GGNCC	5 cut(s)	370, 501, 583, 584, 1448
PsyI	GACNNNGTC	1 cut(s)	952
RsaI	GTAC	3 cut(s)	793, 879, 1468
RsaNI	GTAC	3 cut(s)	792, 878, 1467
RseI	CAYNNNNRTG	1 cut(s)	1425
SalI	GTCGAC	1 cut(s)	68
SaqAI	TTAA	5 cut(s)	302, 336, 716, 1092, 1494
SatI	GCNGC	5 cut(s)	45, 86, 438, 611, 1409
Sau3AI	GATC	6 cut(s)	102, 900, 1018, 1202, 1429, 1510
Sau96I	GGNCC	5 cut(s)	370, 501, 583, 584, 1448
SchI	GAGTC	4 cut(s)	475, 655, 943, 1148
ScrFI	CCNGG	5 cut(s)	477, 499, 1160, 1376, 1377
SduI	GDGCHC	3 cut(s)	587, 1406, 1487
SfcI	CTRYAG	1 cut(s)	226
SfuI	TTCGAA	1 cut(s)	819
SmaI	CCCGGG	1 cut(s)	1377
SmiMI	CAYNNNNRTG	1 cut(s)	1425
SsiI	CCGC	3 cut(s)	45, 929, 1406
SspI	AATATT	1 cut(s)	154
SspMI	CTAG	1 cut(s)	1079
StyD4I	CCNGG	5 cut(s)	475, 497, 1158, 1374, 1375
StyI	CCWWGG	2 cut(s)	504, 1351
TaaI	ACNGT	4 cut(s)	213, 462, 690, 1245
TaiI	ACGT	1 cut(s)	1506
TaqI	TCGA	9 cut(s)	63, 69, 139, 188, 220, 819, 1262, 1509, 1516
TatI	WGTACW	2 cut(s)	877, 1466
TauI	GCSGC	1 cut(s)	47
TfiI	GAWTC	3 cut(s)	754, 821, 980
Tru1I	TTAA	5 cut(s)	302, 336, 716, 1092, 1494
Tru9I	TTAA	5 cut(s)	302, 336, 716, 1092, 1494
TscAI	CASTG	2 cut(s)	318, 611
TseI	GCWGC	4 cut(s)	85, 437, 610, 1408
TspDTI	ATGAA	7 cut(s)	281, 480, 747, 978, 1185, 1243, 1409
TspMI	CCCGGG	1 cut(s)	1375
TspRI	CASTG	2 cut(s)	318, 611
Tth111I	GACNNNGTC	1 cut(s)	952
Van91I	CCANNNNNTGG	2 cut(s)	1442, 1445
XapI	RAATTY	5 cut(s)	384, 409, 965, 1150, 1496
XceI	RCATGY	2 cut(s)	845, 1387
XmaI	CCCGGG	1 cut(s)	1375
XmiI	GTMKAC	2 cut(s)	69, 654
XmnI	GAANNNNTTC	2 cut(s)	753, 969
XspI	CTAG	1 cut(s)	1079
ZraI	GACGTC	1 cut(s)	1504
Zsp2I	ATGCAT	1 cut(s)	352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.