AT1G52780

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0009628
Physical Location & Seq
Forward (+)
19658614 .. 19662186
3573 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G52780.1

Sequence Viewer

Length: 3180 bp
ATGAAAACGGTAATAAATCTCCTTCCTTTGCTCTTTCTCTCATTTGGGTTCCTCTTCTCTTCTCTAGTAATTGCTTCCTTCTCGGAAATGGAGCCCGTACCTATGTTTGAATCAATCGGCGAACACAGAGATGAATCCGCACCTAAGATTAGTTACGATCGTATCAATGATGTGAAGAAAAAGTGCAAATCAGTGTTATCTTCAGCTTCTGAATTAAAGCTTGAAGATATCTCTAGAACTCCTAGAAAATCAAAAAGGAATCTTGGTTTTCGATACGGAGATTGGAATCAAGATTCTGGTGATTCTCCGATTCTACCTTTTGATTCAACGAACACACTTAGAAACTCGTCGACGAAGCCTATGAATCTTGTTTCTTTCTCAGTCACAGATCTAGATCTCCCACATCGAACCAAGAAATACATAGGCGTCAATGGTGTTTTGCTTCTCGCGATCACAATGTTTAGCGAATTACCAAGCTTAAGATCTTATGGGCTCCGTGAGTTTGAGTTATGGCCAAGTCATACTCAGCTTAAGATCTCGTTTCAAGGGATTTACGTTGAGAATGATGATGATGAAAGAGTTTTGTGTATGCTTGGTGAAACAATGTTACCTTCTCGTGATGAATCTGATTCTTCTAATCCATGGAAATGGGTTAAAGAACATGACACGCCTCCTCTTTTACAAGATGATATGATTCTGCTTCTTCTTCGGTACCCGAAAAGCTTCACATTGACTAAAAGAGTGATTCAAGGAGAGCTTACAAGTCTAAACCAGAAGCCTAGTCTCAAGCTTTTCGACAAGATCCATCTCTTTTCTCAGCTTGGGAAATCTGTTCGTTACGATTTCGTCTCTAATGATTTGGTATCAAAGGCTTGCGATCCATATCCTTATAAAAACGATACCTTTACGAGCTCTGGAAGTGGTGGTATCAATGTCTATAAAGAGAAAGGATTCTGTGATCTTCTTCAAAGAGTTACTAACCGCGCGCCTCTAACCGTTGTACCTAACTGGAAATGCCACGGTACAGATGAGTACTGCAGCAAGTTAGGTCCGTTTGCGTTTGACAAAGATATTAAATCAACGGATGGTAGCTTTAAAGATGTGAAGTTGTATATGCAAAACGTACATTGCGAGGAAACCGCAGCTCGGTCTCAATCCGATGCTGTTACAAAAGTCTCGGCGGTTTTTCGAGCGGTTCATCCGAATGAGAATCTTTACATTTCAGGGATGAGATCAGGGATAGACAATATGACTGTTACAGCTGAAGGGATTTGGAAACCGTCTAGCGGGCAGTTATGTATGGTTGGTTGCAGGCGAGGCCAAGTCGATGGCTGCAACGCTCGTATTTGTTTGTATATTCCAACTACTTTTTCGATAAGGCAGCGAAGTATACTTGTAGGAACATTCTCCTGCCTAAACACTGAGAAGAATTTGACTCCGTCTTTCTTCCCTTTGTCGTTTGAGAAGCTTGTGGAGCCTATGGATATGCAGAATTACTTCCACTCTTCGGCTTCGCATCCGTTTTATAGTTACTCGAAGTTAGATGATGCTGGTGCTATCCTTGAGAGAAACGAAGAGTTCTCTTTCGGAACTATAATCAAGAAGTCGGTAATGCATTTTCCGAAACTAGAAGACTCTGATGATTTGCTTTCGAGCCTTTCTCTTCTTGCTGAGGACTTGACTTTCCATACACCTGCATTTACCGAGAAACGGGCCTCGGGAACTAATTTCGGCATGGATGTTCTCTCGCTCGGTCCTTTATTCGGACTTTTCTGGCGTACTTCGAACTTTTCCATCGCGGATCAGACAACTCCTTACCGCACAAAAGCTGAATACACTGAGAAACAGCTTCTTCTGAACGTATCAGGTCAAATCTCACTTACAGGGGAAAATTTCGGTAACTTCTCTGTTCTTTACTTGGAAGGTCTTTACGATGAGCATGTTGGGAAAATGTATCTTGTTGGATGCAGAGACGTGAGAGCCTCATGGAAAATCTTGTTTGAGAGTCCTGATCTTGAAGCTGGGCTAGATTGTTTGATCGACGTGGTGGTTTCTTATCCACCGATCAAATCACGGTGGTTGGCTGATCCAACTGCTAAAGTTTCAATATCTAGCAACAGACCAGAAGATGATCCTCTCTATTTTAAACCTATTAAGCTCAAAACAACTCCTATCTTTTACCGAAGGCAACGCGAAGACATTCTTTCTCGTGCAGGCGTTGAAGGGATTCTCAGGGTTCTCACTCTTACATTCTCTATCGGATGCATCACGAGCCTGCTTTTTTACGTTAGTAGCAATACCGACTCGCTTCCTTTTGTGTCCCTTGTAATGCTTGGAGTTCAAGCTCTTGGTTATAGCTTGCCGTTGATCACCGGAGCAGAGGCTCTCTTTAAAAGAAAAGCAGCTTCAGCAACAACATATGAAACACCTTCTTATGATCTACAGAGAAGTCAATGGTTCAATGTGATTGATTACACTGTGAAGCTCCTCGTGATGGTCTGCTTTCTACTTACTCTAAGGCTTTGTCAGAAAGTGTGGAAGTCCCGTGCCAGATTGCTCACTCGAACACCTCAAGAACCGCATAAAGTTCCAAGTGATCGCCGTGTGCTTCTCGTTGTCTTGATATTACACGCACTAGGATACATTGTCGCGCTGATTCGACATCCGGCAAGAGCAGATAGATTAGTTGGTGGAAGTTACGGATCTAATGCTTCAAATTGGTGGCAAACTGAAACAGAGGAGTATATTGGTTTAGTTCAAGATTTCTTCTTGCTCCCTCAGGTTATTGCTAATGCTATGTGGCAGATTGATTCCCGGCAGCCACTAAGGAAGCTATATTACTTCGGGATCACACTTGTCAGACTTTTCCCGCATGCCTATGACTACATCGTTGGCTCTGTTCCTGATCCTTACTTCATTGGAGAAGAACATGAGTTTGTTAATCCGAATTTCGACTTCTTCTCTAAGTTTGGAGATATCGCCATACCTGTTACCGCGATTCTACTTGCTGTCATTGTGTTTGTTCAGCAGAGATGGGACTATGACAAGCTTTCACAAGCTTTATCCTTTGGACGGTTTAGGATTCTCCCTTCTCGTTCTGTTAAGTACGAGAGAGTAATGTCCGAATCCGAAATGGTTTCGGGAGCCCGTGTCAATGGAAATCGCGGTGATGAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2921

Protein Analysis

1059

Amino Acids

119.96

Weight (kDa)

7.01

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 58 - 269 5.7e-37 DUF2921 lipocalin-like domain
DUF2921_N PF25333 288 - 479 1e-42 DUF2921 lipocalin-like domain
DUF2921_N PF25333 526 - 719 1.8e-35 DUF2921 lipocalin-like domain
DUF2921 PF11145 730 - 1015 2.5e-61 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 891
AarI CACCTGC 1 cut(s) 1702
Acc36I ACCTGC 1 cut(s) 1702
Acc65I GGTACC 1 cut(s) 711
AccB1I GGYRCC 1 cut(s) 711
AccBSI CCGCTC 1 cut(s) 1193
AccI GTMKAC 2 cut(s) 350, 1390
AccII CGCG 8 cut(s) 449, 984, 986, 1799, 2193, 2651, 2996, 3165
AclWI GGATC 8 cut(s) 796, 872, 1809, 2081, 2126, 2710, 2855, 2900
AcoI YGGCCR 1 cut(s) 512
AcsI RAATTY 3 cut(s) 1429, 1891, 2947
AcuI CTGAAG 3 cut(s) 186, 1284, 2391
AcyI GRCGYC 1 cut(s) 426
AfaI GTAC 8 cut(s) 99, 713, 1002, 1024, 1034, 1125, 1780, 3107
AfiI CCNNNNNNNGG 7 cut(s) 1146, 1286, 1507, 1710, 1763, 2494, 3072
AflII CTTAAG 2 cut(s) 478, 530
AjiI CACGTC 2 cut(s) 1975, 2044
AjuI GAANNNNNNNTTGG 2 cut(s) 1354, 1386
Alw21I GWGCWC 1 cut(s) 914
Alw26I GTCTC 5 cut(s) 788, 853, 1155, 1180, 1965
AlwI GGATC 8 cut(s) 796, 872, 1809, 2081, 2126, 2710, 2855, 2900
AlwNI CAGNNNCTG 1 cut(s) 209
Ama87I CYCGRG 1 cut(s) 1717
AoxI GGCC 3 cut(s) 512, 1318, 1713
ApeKI GCWGC 6 cut(s) 1038, 1142, 1332, 1381, 2402, 2818
ApoI RAATTY 3 cut(s) 1429, 1891, 2947
Asp700I GAANNNNTTC 5 cut(s) 722, 950, 1496, 2199, 2226
Asp718I GGTACC 1 cut(s) 711
AspLEI GCGC 3 cut(s) 986, 988, 2653
AspS9I GGNCC 3 cut(s) 1049, 1713, 1754
AsuC2I CCSGG 1 cut(s) 2815
AsuHPI GGTGA 4 cut(s) 311, 608, 2362, 3179
AsuII TTCGAA 1 cut(s) 1784
AvaI CYCGRG 1 cut(s) 1717
AvaII GGWCC 2 cut(s) 1049, 1754
AxyI CCTNAGG 1 cut(s) 2778
BaeI ACNNNNGTAYC 4 cut(s) 145, 178, 984, 1017
BalI TGGCCA 1 cut(s) 514
BanI GGYRCC 1 cut(s) 711
BanII GRGCYC 4 cut(s) 96, 495, 914, 3148
BarI GAAGNNNNNNTAC 2 cut(s) 2822, 2854
BauI CACGAG 4 cut(s) 615, 2208, 2269, 2489
BbsI GAAGAC 2 cut(s) 1638, 2202
Bbv12I GWGCWC 1 cut(s) 914
BbvCI CCTCAGC 1 cut(s) 1671
BbvI GCAGC 6 cut(s) 1050, 1154, 1319, 1393, 2414, 2830
BccI CCATC 6 cut(s) 813, 1079, 1322, 1802, 2488, 3027
BceAI ACGGC 2 cut(s) 2347, 2586
BciVI GTATCC 1 cut(s) 2633
BclI TGATCA 1 cut(s) 2367
BcnI CCSGG 1 cut(s) 2815
BcoDI GTCTC 5 cut(s) 788, 853, 1155, 1180, 1965
BfmI CTRYAG 2 cut(s) 1036, 2441
BfrI CTTAAG 2 cut(s) 478, 530
BfuAI ACCTGC 1 cut(s) 1702
BfuI GTATCC 1 cut(s) 2633
BglII AGATCT 4 cut(s) 388, 394, 482, 534
BisI GCNGC 6 cut(s) 1039, 1143, 1333, 1382, 2403, 2819
BlsI GCNGC 6 cut(s) 1040, 1144, 1334, 1383, 2404, 2820
BmcAI AGTACT 1 cut(s) 1034
Bme1390I CCNGG 1 cut(s) 2815
Bme18I GGWCC 2 cut(s) 1049, 1754
BmeT110I CYCGRG 1 cut(s) 1717
BmgBI CACGTC 2 cut(s) 1975, 2044
BmgT120I GGNCC 3 cut(s) 1049, 1713, 1754
BmiI GGNNCC 6 cut(s) 50, 93, 494, 713, 1476, 3145
BmrFI CCNGG 1 cut(s) 2815
BmsI GCATC 6 cut(s) 1150, 1525, 1537, 1955, 2252, 2274
BpiI GAAGAC 2 cut(s) 1638, 2202
BplI GAGNNNNNCTC 2 cut(s) 1645, 1677
Bpu10I CCTNAGC 1 cut(s) 1671
Bpu14I TTCGAA 1 cut(s) 1784
BpuEI CTTGAG 3 cut(s) 770, 1583, 2556
BpuMI CCSGG 1 cut(s) 2815
BsaBI GATNNNNATC 3 cut(s) 285, 393, 882
BsaHI GRCGYC 1 cut(s) 426
BsaI GGTCTC 1 cut(s) 1155
BsaJI CCNNGG 3 cut(s) 641, 1018, 1716
BsaWI WCCGGW 1 cut(s) 2372
BsaXI ACNNNNNCTCC 2 cut(s) 3135, 3165
Bsc4I CCNNNNNNNGG 7 cut(s) 1146, 1286, 1507, 1710, 1763, 2494, 3072
Bse1I ACTGG 1 cut(s) 1013
Bse21I CCTNAGG 1 cut(s) 2778
Bse3DI GCAATG 1 cut(s) 1126
Bse8I GATNNNNATC 3 cut(s) 285, 393, 882
BseDI CCNNGG 3 cut(s) 641, 1018, 1716
BseGI GGATG 8 cut(s) 1090, 1198, 1233, 1516, 1744, 1970, 2267, 2662
BseJI GATNNNNATC 3 cut(s) 285, 393, 882
BseLI CCNNNNNNNGG 7 cut(s) 1146, 1286, 1507, 1710, 1763, 2494, 3072
BseMI GCAATG 1 cut(s) 1126
BseMII CTCAG 8 cut(s) 393, 539, 830, 1413, 1662, 1830, 2245, 2792
BseNI ACTGG 1 cut(s) 1013
BsePI GCGCGC 1 cut(s) 984
BseRI GAGGAG 3 cut(s) 663, 2477, 2753
BseXI GCAGC 6 cut(s) 1050, 1154, 1319, 1393, 2414, 2830
BseYI CCCAGC 1 cut(s) 2021
BsgI GTGCAG 1 cut(s) 2232
Bsh1236I CGCG 8 cut(s) 449, 984, 986, 1799, 2193, 2651, 2996, 3165
Bsh1285I CGRYCG 1 cut(s) 160
BshFI GGCC 3 cut(s) 514, 1320, 1715
BshNI GGYRCC 1 cut(s) 711
BsiEI CGRYCG 1 cut(s) 160
BsiHKAI GWGCWC 1 cut(s) 914
BsiHKCI CYCGRG 1 cut(s) 1717
BsiSI CCGG 3 cut(s) 2373, 2666, 2815
BslFI GGGAC 3 cut(s) 2305, 2527, 3050
BslI CCNNNNNNNGG 7 cut(s) 1146, 1286, 1507, 1710, 1763, 2494, 3072
BsmAI GTCTC 5 cut(s) 788, 853, 1155, 1180, 1965
BsmBI CGTCTC 2 cut(s) 853, 1965
BsmFI GGGAC 3 cut(s) 2305, 2527, 3050
BsnI GGCC 3 cut(s) 514, 1320, 1715
Bso31I GGTCTC 1 cut(s) 1155
BsoBI CYCGRG 1 cut(s) 1717
Bsp119I TTCGAA 1 cut(s) 1784
Bsp1286I GDGCHC 4 cut(s) 96, 495, 914, 3148
Bsp19I CCATGG 1 cut(s) 641
Bsp68I TCGCGA 1 cut(s) 449
BspANI GGCC 3 cut(s) 514, 1320, 1715
BspCNI CTCAG 8 cut(s) 392, 538, 829, 1414, 1663, 1831, 2244, 2791
BspFNI CGCG 8 cut(s) 449, 984, 986, 1799, 2193, 2651, 2996, 3165
BspLI GGNNCC 6 cut(s) 50, 93, 494, 713, 1476, 3145
BspMAI CTGCAG 1 cut(s) 1040
BspMI ACCTGC 1 cut(s) 1702
BspPI GGATC 8 cut(s) 796, 872, 1809, 2081, 2126, 2710, 2855, 2900
BspT104I TTCGAA 1 cut(s) 1784
BspT107I GGYRCC 1 cut(s) 711
BspTI CTTAAG 2 cut(s) 478, 530
BspTNI GGTCTC 1 cut(s) 1155
BsrBI CCGCTC 1 cut(s) 1193
BsrDI GCAATG 1 cut(s) 1126
BsrI ACTGG 1 cut(s) 1013
BssECI CCNNGG 3 cut(s) 641, 1018, 1716
BssHII GCGCGC 1 cut(s) 984
BssNAI GTATAC 1 cut(s) 1391
BssNI GRCGYC 1 cut(s) 426
BssSI CACGAG 4 cut(s) 615, 2208, 2269, 2489
BssT1I CCWWGG 1 cut(s) 641
Bst1107I GTATAC 1 cut(s) 1391
Bst2BI CACGAG 4 cut(s) 615, 2208, 2269, 2489
Bst4CI ACNGT 8 cut(s) 10, 997, 1022, 1255, 1281, 2076, 2479, 3075
Bst6I CTCTTC 5 cut(s) 59, 64, 1510, 1569, 1668
BstACI GRCGYC 1 cut(s) 426
BstAFI CTTAAG 2 cut(s) 478, 530
BstBI TTCGAA 1 cut(s) 1784
BstC8I GCNNGC 8 cut(s) 874, 986, 1289, 1313, 2215, 2276, 2360, 2874
BstDSI CCRYGG 2 cut(s) 641, 1018
BstF5I GGATG 8 cut(s) 1090, 1198, 1233, 1516, 1744, 1970, 2267, 2662
BstFNI CGCG 8 cut(s) 449, 984, 986, 1799, 2193, 2651, 2996, 3165
BstHHI GCGC 3 cut(s) 986, 988, 2653
BstMAI GTCTC 5 cut(s) 788, 853, 1155, 1180, 1965
BstMCI CGRYCG 1 cut(s) 160
BstMWI GCNNNNNNNGC 4 cut(s) 1317, 1474, 2271, 2408
BstNSI RCATGY 2 cut(s) 1943, 2876
BstSCI CCNGG 1 cut(s) 2813
BstSFI CTRYAG 2 cut(s) 1036, 2441
BstUI CGCG 8 cut(s) 449, 984, 986, 1799, 2193, 2651, 2996, 3165
BstV1I GCAGC 6 cut(s) 1050, 1154, 1319, 1393, 2414, 2830
BstV2I GAAGAC 2 cut(s) 1638, 2202
BstX2I RGATCY 6 cut(s) 388, 394, 482, 534, 801, 2702
BstXI CCANNNNNNTGG 2 cut(s) 648, 1328
BstYI RGATCY 6 cut(s) 388, 394, 482, 534, 801, 2702
BstZ17I GTATAC 1 cut(s) 1391
Bsu36I CCTNAGG 1 cut(s) 2778
BsuI GTATCC 1 cut(s) 2633
BsuRI GGCC 3 cut(s) 514, 1320, 1715
BtgI CCRYGG 2 cut(s) 641, 1018
BtgZI GCGATG 1 cut(s) 1780
BtrI CACGTC 2 cut(s) 1975, 2044
BtsCI GGATG 8 cut(s) 1090, 1198, 1233, 1516, 1744, 1970, 2267, 2662
BtsIMutI CAGTG 4 cut(s) 198, 1419, 1836, 2475
BtuMI TCGCGA 1 cut(s) 449
BveI ACCTGC 1 cut(s) 1702
Cac8I GCNNGC 8 cut(s) 874, 986, 1289, 1313, 2215, 2276, 2360, 2874
CaiI CAGNNNCTG 1 cut(s) 209
CfoI GCGC 3 cut(s) 986, 988, 2653
Cfr13I GGNCC 3 cut(s) 1049, 1713, 1754
CseI GACGC 1 cut(s) 415
Csp6I GTAC 8 cut(s) 98, 712, 1001, 1023, 1033, 1124, 1779, 3106
CviAII CATG 7 cut(s) 642, 662, 1735, 1940, 1986, 2873, 2930
CviQI GTAC 8 cut(s) 98, 712, 1001, 1023, 1033, 1124, 1779, 3106
DraI TTTAAA 3 cut(s) 1096, 2146, 2392
EaeI YGGCCR 1 cut(s) 512
Eam1104I CTCTTC 5 cut(s) 59, 64, 1510, 1569, 1668
EarI CTCTTC 5 cut(s) 59, 64, 1510, 1569, 1668
Ecl136II GAGCTC 1 cut(s) 912
Eco130I CCWWGG 1 cut(s) 641
Eco24I GRGCYC 4 cut(s) 96, 495, 914, 3148
Eco31I GGTCTC 1 cut(s) 1155
Eco32I GATATC 2 cut(s) 229, 2977
Eco47I GGWCC 2 cut(s) 1049, 1754
Eco53kI GAGCTC 1 cut(s) 912
Eco57I CTGAAG 3 cut(s) 186, 1284, 2391
Eco81I CCTNAGG 1 cut(s) 2778
Eco88I CYCGRG 1 cut(s) 1717
EcoICRI GAGCTC 1 cut(s) 912
EcoRV GATATC 2 cut(s) 229, 2977
EcoT14I CCWWGG 1 cut(s) 641
EcoT22I ATGCAT 2 cut(s) 1617, 2267
EcoT38I GRGCYC 4 cut(s) 96, 495, 914, 3148
ErhI CCWWGG 1 cut(s) 641
Esp3I CGTCTC 2 cut(s) 853, 1965
FaeI CATG 7 cut(s) 645, 665, 1738, 1943, 1989, 2876, 2933
FalI AAGNNNNNCTT 4 cut(s) 741, 773, 2187, 2219
FaqI GGGAC 3 cut(s) 2305, 2527, 3050
FatI CATG 7 cut(s) 641, 661, 1734, 1939, 1985, 2872, 2929
FauI CCCGC 2 cut(s) 1280, 2877
FauNDI CATATG 1 cut(s) 2419
FbaI TGATCA 1 cut(s) 2367
FblI GTMKAC 2 cut(s) 350, 1390
Fnu4HI GCNGC 6 cut(s) 1039, 1143, 1333, 1382, 2403, 2819
FokI GGATG 8 cut(s) 1097, 1185, 1240, 1503, 1751, 1977, 2274, 2649
FriOI GRGCYC 4 cut(s) 96, 495, 914, 3148
Fsp4HI GCNGC 6 cut(s) 1039, 1143, 1333, 1382, 2403, 2819
GlaI GCGC 3 cut(s) 985, 987, 2652
GluI GCNGC 6 cut(s) 1039, 1143, 1333, 1382, 2403, 2819
GsaI CCCAGC 1 cut(s) 2025
HaeIII GGCC 3 cut(s) 514, 1320, 1715
HapII CCGG 3 cut(s) 2373, 2666, 2815
HgaI GACGC 1 cut(s) 415
HhaI GCGC 3 cut(s) 986, 988, 2653
Hin1I GRCGYC 1 cut(s) 426
Hin1II CATG 7 cut(s) 645, 665, 1738, 1943, 1989, 2876, 2933
Hin6I GCGC 3 cut(s) 984, 986, 2651
HinP1I GCGC 3 cut(s) 984, 986, 2651
HincII GTYRAC 1 cut(s) 351
HindII GTYRAC 1 cut(s) 351
HindIII AAGCTT 7 cut(s) 218, 475, 721, 788, 1466, 3047, 3057
HpaII CCGG 3 cut(s) 2373, 2666, 2815
HphI GGTGA 4 cut(s) 311, 608, 2362, 3179
Hpy166II GTNNAC 2 cut(s) 351, 1391
Hpy8I GTNNAC 2 cut(s) 351, 1391
Hpy99I CGWCG 3 cut(s) 352, 355, 2045
HpyAV CCTTC 9 cut(s) 32, 88, 621, 1259, 1916, 2178, 2216, 2439, 3099
HpyCH4III ACNGT 8 cut(s) 10, 997, 1022, 1255, 1281, 2076, 2479, 3075
HpyCH4IV ACGT 6 cut(s) 555, 1122, 1860, 1974, 2043, 2286
HpyF10VI GCNNNNNNNGC 4 cut(s) 1317, 1474, 2271, 2408
HpySE526I ACGT 6 cut(s) 555, 1122, 1860, 1974, 2043, 2286
Hsp92I GRCGYC 1 cut(s) 426
Hsp92II CATG 7 cut(s) 645, 665, 1738, 1943, 1989, 2876, 2933
HspAI GCGC 3 cut(s) 984, 986, 2651
KpnI GGTACC 1 cut(s) 715
Ksp22I TGATCA 1 cut(s) 2367
LmnI GCTCC 7 cut(s) 91, 498, 1474, 2375, 2490, 2778, 3143
Lsp1109I GCAGC 6 cut(s) 1050, 1154, 1319, 1393, 2414, 2830
LweI GCATC 6 cut(s) 1150, 1525, 1537, 1955, 2252, 2274
MaeII ACGT 6 cut(s) 555, 1122, 1860, 1974, 2043, 2286
MbiI CCGCTC 1 cut(s) 1193
MflI RGATCY 6 cut(s) 388, 394, 482, 534, 801, 2702
MhlI GDGCHC 4 cut(s) 96, 495, 914, 3148
MlsI TGGCCA 1 cut(s) 514
MluCI AATT 9 cut(s) 69, 212, 467, 1429, 1492, 1726, 1891, 2716, 2947
MluNI TGGCCA 1 cut(s) 514
MlyI GAGTC 4 cut(s) 1429, 1628, 2014, 2297
MmeI TCCRAC 3 cut(s) 1385, 1942, 2114
Mox20I TGGCCA 1 cut(s) 514
Mph1103I ATGCAT 2 cut(s) 1617, 2267
MroXI GAANNNNTTC 5 cut(s) 722, 950, 1496, 2199, 2226
MscI TGGCCA 1 cut(s) 514
MslI CAYNNNNRTG 4 cut(s) 129, 646, 1203, 2877
Msp20I TGGCCA 1 cut(s) 514
MspA1I CMGCKG 1 cut(s) 1262
MspCI CTTAAG 2 cut(s) 478, 530
MspI CCGG 3 cut(s) 2373, 2666, 2815
MspR9I CCNGG 1 cut(s) 2815
MvnI CGCG 8 cut(s) 449, 984, 986, 1799, 2193, 2651, 2996, 3165
MwoI GCNNNNNNNGC 4 cut(s) 1317, 1474, 2271, 2408
NciI CCSGG 1 cut(s) 2815
NcoI CCATGG 1 cut(s) 641
NdeI CATATG 1 cut(s) 2419
NlaIII CATG 7 cut(s) 645, 665, 1738, 1943, 1989, 2876, 2933
NlaIV GGNNCC 6 cut(s) 50, 93, 494, 713, 1476, 3145
NmeAIII GCCGAG 1 cut(s) 1157
NmuCI GTSAC 1 cut(s) 382
NruI TCGCGA 1 cut(s) 449
NsiI ATGCAT 2 cut(s) 1617, 2267
NspI RCATGY 2 cut(s) 1943, 2876
NspV TTCGAA 1 cut(s) 1784
PaeI GCATGC 1 cut(s) 2876
PaqCI CACCTGC 1 cut(s) 1702
PauI GCGCGC 1 cut(s) 984
PcsI WCGNNNNNNNCGW 1 cut(s) 1128
PdmI GAANNNNTTC 5 cut(s) 722, 950, 1496, 2199, 2226
PflFI GACNNNGTC 1 cut(s) 1438
PkrI GCNGC 6 cut(s) 1040, 1144, 1334, 1383, 2404, 2820
Ple19I CGATCG 1 cut(s) 160
PleI GAGTC 4 cut(s) 1429, 1628, 2013, 2297
PpsI GAGTC 4 cut(s) 1429, 1628, 2013, 2297
PsiI TTATAA 1 cut(s) 891
Psp124BI GAGCTC 1 cut(s) 914
PspFI CCCAGC 1 cut(s) 2021
PspN4I GGNNCC 6 cut(s) 50, 93, 494, 713, 1476, 3145
PspPI GGNCC 3 cut(s) 1049, 1713, 1754
PstI CTGCAG 1 cut(s) 1040
PstNI CAGNNNCTG 1 cut(s) 209
PsuI RGATCY 6 cut(s) 388, 394, 482, 534, 801, 2702
PsyI GACNNNGTC 1 cut(s) 1438
PteI GCGCGC 1 cut(s) 984
PvuI CGATCG 1 cut(s) 160
PvuII CAGCTG 1 cut(s) 1262
RruI TCGCGA 1 cut(s) 449
RsaI GTAC 8 cut(s) 99, 713, 1002, 1024, 1034, 1125, 1780, 3107
RsaNI GTAC 8 cut(s) 98, 712, 1001, 1023, 1033, 1124, 1779, 3106
RseI CAYNNNNRTG 4 cut(s) 129, 646, 1203, 2877
SacI GAGCTC 1 cut(s) 914
SalI GTCGAC 1 cut(s) 349
SatI GCNGC 6 cut(s) 1039, 1143, 1333, 1382, 2403, 2819
Sau96I GGNCC 3 cut(s) 1049, 1713, 1754
ScaI AGTACT 1 cut(s) 1034
SchI GAGTC 4 cut(s) 1429, 1628, 2014, 2297
ScrFI CCNGG 1 cut(s) 2815
SduI GDGCHC 4 cut(s) 96, 495, 914, 3148
SfaNI GCATC 6 cut(s) 1150, 1525, 1537, 1955, 2252, 2274
SfcI CTRYAG 2 cut(s) 1036, 2441
SfuI TTCGAA 1 cut(s) 1784
SgrDI CGTCGACG 1 cut(s) 349
SinI GGWCC 2 cut(s) 1049, 1754
SmiMI CAYNNNNRTG 4 cut(s) 129, 646, 1203, 2877
SmlI CTYRAG 5 cut(s) 478, 530, 785, 1562, 2571
SmoI CTYRAG 5 cut(s) 478, 530, 785, 1562, 2571
SphI GCATGC 1 cut(s) 2876
Sse9I AATT 9 cut(s) 69, 212, 467, 1429, 1492, 1726, 1891, 2716, 2947
SstI GAGCTC 1 cut(s) 914
StyD4I CCNGG 1 cut(s) 2813
StyI CCWWGG 1 cut(s) 641
TaaI ACNGT 8 cut(s) 10, 997, 1022, 1255, 1281, 2076, 2479, 3075
TaiI ACGT 6 cut(s) 558, 1125, 1863, 1977, 2046, 2289
TaqII GACCGA 2 cut(s) 1137, 1742
TasI AATT 9 cut(s) 69, 212, 467, 1429, 1492, 1726, 1891, 2716, 2947
TatI WGTACW 1 cut(s) 1032
TscAI CASTG 4 cut(s) 198, 1426, 1843, 2482
TseFI GTSAC 1 cut(s) 382
TseI GCWGC 6 cut(s) 1038, 1142, 1332, 1381, 2402, 2818
Tsp45I GTSAC 1 cut(s) 382
TspDTI ATGAA 8 cut(s) 17, 147, 377, 588, 636, 1187, 2436, 2905
TspGWI ACGGA 7 cut(s) 291, 485, 1041, 1097, 1428, 1509, 2715
TspRI CASTG 4 cut(s) 198, 1426, 1843, 2482
Tth111I GACNNNGTC 1 cut(s) 1438
Vha464I CTTAAG 2 cut(s) 478, 530
VpaK11BI GGWCC 2 cut(s) 1049, 1754
XapI RAATTY 3 cut(s) 1429, 1891, 2947
XbaI TCTAGA 2 cut(s) 233, 391
XceI RCATGY 2 cut(s) 1943, 2876
XmiI GTMKAC 2 cut(s) 350, 1390
XmnI GAANNNNTTC 5 cut(s) 722, 950, 1496, 2199, 2226
ZrmI AGTACT 1 cut(s) 1034
Zsp2I ATGCAT 2 cut(s) 1617, 2267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.