RLG00000019699

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0009628
Physical Location & Seq
Reverse (-)
55615058 .. 55619468
4411 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019699

Sequence Viewer

Length: 2988 bp
ATGGTTAATGGGGATTGGAGGCAGGAAGTGGGTAAGGTTCCAATCATGCCATTTGATGATAGAGAAGTTCAGAGTGAGTTTTTGGGTAATAGAACTCCGTCAAACTTGGCTTCGTTTTGGCTTATGGATATTGATCGTGCCTATCCATCCAAGAAGTCACCAAGTGTTAGTGGATTCATGGTTATGGGTATTACTATTGATGGTAGCTTTATGGATTATGGGTATGAAGGGAATCCCGAGTTCCAGATGTGGCCTAGCCATTCTCAAATTACAATTTCCTTCCAAGGGATTTACACTGAAACCAAGAAGAATGGTGGCGAAAGAATGATGTGCTTGTTGGCGAGTACAATGTTGCCCTCTCGGGAGCCTGATTCTGCTAATCCATGGGAGTGGCTGAAGGCTTCTGATTCAAGTAACCAACCTCCTCTTTCTCAAGATGATCAGATTCTACTTGTTCTTCACTTTCCGATGACTTTCAATTTGACAAATAGGGCTATCCGAGGGGAATTGAGAAGTTTAAATCCAAAGTCAAACTCAAAGTACTTTGATGAGGTTCACATTTTATCACAGTTGGGGAAGTCTGCAGTTTATGAATTTGGATCAGAAAAGATTGTTTCCAGAGCATGTGATCCATACCCTTCTAATGACAGCTTGGTATATGGTGGCATTAGCAACTATAAAGGTCATGCTATTTGTGAAATCCTTGAAGAAGTTGCACGGGACCAAGCTTTCACTGTTGTGCCGGACTGGAGATGCAATGGCACCGATGAGTTTTGCAGTAAGTTGGGTCCATTTGTGACAGATGAAGAGATTAAGGCGTCAGATGGAAGCTTTAAAGGTGCTGAACTATATATGCAGGAAATCAAGTGCGAACAAAAAGCTGCCAGGGGAGATTCCTGTCCTGCAAGGGTTTCAGGTGTATTTAGAGCGGTTTCTCCGATGGAGAATCTGTATACTGCAGCAAAGAGATCTGGGCTTAACAACATGACTGTTGCTGCTGAGGGAATTTGGAAATCTACCAGTGGACAGCTTTTGCATGGGAGTCAATGCAATACTCGGATATGTATGTATGTACCTACCTCTTTCTCCATAAAGCAAAGAAGCATTCTTTATGGAAGTTTCTCTAGCATCAATAACAGTGCTACATCATATTTTCCTCTCTCGTTTGAAAAGTTAGTGCAGCCTACGGAACTGTGGAATTATTTCAGAGTCTCCAGTCCAAACTATAAGTACACAAAATTCTCTTCAGCTGCTGTTGTCTTGGGAAAAAACGAGCCCTTCAGTGTTGGAACTACAGAAGCTTTTGGACTCGGTCTTTCTGTGCTCTCCGAAGATCTAACCCTTCATGTGTCTGCATTTCCTGATCCAATTCCAAAGCCTCAGCTTCCAAGAGTAAACCTTCAGATGGAGATTCTCTCAGTGGGTCCCTTGTTTGGTCGCTATTGGTCTCCACAAAATGGTTCCATTGCACAAGAGGAGACTCCTTACCACACAAAGTCTGAATACACTGAAAAGCAGCTCCTTCTAAATGTCTCAGCACAACTCACCATCGCTGGAAAAGCCTATAGCAATCTTTCTGTACTATATTTGGAAGGCCTTTATGGTCCACATGTTGGGAAGATGTATCTAGTCAGATGCAGGGATGTTCGAGCCTCGTGGAAGATCTTGTACGAGAGCATGGATCTTGAAGCCGGGCTAGATTGTTTGGTTGAGGTGGTTGTCTCTTATCCTCCCACTACATCTCGATGGTTAGTCAATCCAGCAGCCTGTATTTCTGTAGCCAGCCAAAGGACTGAAGATGATCCTCTTTACTTTAGTACAGAAGCAGCGGGAAGACATTTCTCTTGTCGGGGGATTGAGGGAATCCTCCGAGTTTTGACTCTTTCGCTAGCAATATGTGTAATTTTAAGCCAACTGTTTTACATTAGGTATAATGTGGATTCTGTTCCTTACGTGTCTCTAGTCATGCTAGGTATTCAAGCCATTGGGTATATCATTCCTCTGGTCACAGGCGCTGAAGCACTCTTCAAGAAGTTAGCTTCTGAATCCTATGAAACATCAACGTATGACCTCGATAACAGTCAGTGGTTTCATATACTTGATTACACGACTGTCAGAGTGTGGAAATCTCGCATCAGGTTACTTGCACAAACTCCTCTTGAACCACATCGTGTCCCTAATCATAAGCGGGTGCTTTATGAGGACCGGACAAAAGGCTATAAAATTGCCAGGGAAGAACCTCGTGGACTGTGGGAATGGGAAACTGAACTAGAGGAGTATGTGGGACTTGTCCAAGATTTTTTCCTACTCCCCCAACTGATTGGTAACCTGAGCTCCGCTCTCAACCCTTACTTTGCCGAGGAGTATGAGTTTGTCAACCCAAGTTTGGACTTTTACTTCATGTTTGGGGATATTGCCATACCTATTACAGCAATTATCCTTGCAGTTGTAGTCTATGTTCAGCAGAGGTGGAATTATGAGAGGCTGAGCAAGATGCTTACGCTCGGGCAATGTAGGCTTCTTCCTTTGGGATCCAGAATGTATGAGACGTTGCCTTCCAGTTCCAAGGCATTTGAAGCTGAGCTTGTTTCTGGTGTCAGTGGTGAACTCAGAGGTTGCGGGATGGATGCCATGTTTACAGGAGTTTCATGCACTTCTTCCATCAACTCTACCTTGAAAAATGGGTGTGCTGAGCAAAGGCTACCAGACTGTAGGAGCTCTCATGACAAATTTGTGCCAAAACTTGGTGTCATGTCTGACAGTGGAATCAAGATCCTTGAGAATGACAACATGACTCGGATTGATTGTTGGGATGTTTGCTTCAAAATGTGTTCTTGTCTTGCTTATGCTTCTGCAAATGATGATGGCACCGGCTGTGAGATTTGGAAGAAAGGGGCAAGTTTCACACAAAACAATTTGGGCAGTCTGAGAGAGATATACATCCGGGAATCCAAAGGTAAATTATCTACATTCTATGACATGGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2921

Protein Analysis

996

Amino Acids

111.58

Weight (kDa)

5.48

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 1 - 186 8.3e-29 DUF2921 lipocalin-like domain
DUF2921_N PF25333 205 - 385 3.2e-26 DUF2921 lipocalin-like domain
DUF2921_N PF25333 415 - 606 2.9e-27 DUF2921 lipocalin-like domain
DUF2921 PF11145 617 - 789 1.9e-19 Transmembrane E3 ligase/DUF2921 transmembrane domain
PAN_2 PF08276 904 - 964 2e-07 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 761, 2867
AccB7I CCANNNNNTGG 3 cut(s) 1457, 1613, 2744
AccBSI CCGCTC 2 cut(s) 929, 2339
AccI GTMKAC 1 cut(s) 953
AciI CCGC 5 cut(s) 929, 1829, 2188, 2337, 2619
AclWI GGATC 8 cut(s) 607, 623, 1358, 1689, 1796, 2526, 2539, 2767
AcsI RAATTY 4 cut(s) 593, 1005, 1238, 2729
AcuI CTGAAG 6 cut(s) 416, 1230, 1264, 1385, 1815, 2037
AcyI GRCGYC 1 cut(s) 818
AdeI CACNNNGTG 2 cut(s) 164, 2171
AfaI GTAC 7 cut(s) 346, 542, 1074, 1232, 1581, 1670, 1819
AfiI CCNNNNNNNGG 8 cut(s) 285, 1405, 1433, 1457, 1613, 1788, 2386, 2744
AflIII ACRYGT 2 cut(s) 1609, 1953
AjnI CCWGG 2 cut(s) 884, 2228
AleI CACNNNNGTG 1 cut(s) 737
Alw21I GWGCWC 3 cut(s) 1326, 2336, 2720
Alw26I GTCTC 7 cut(s) 1216, 1452, 1472, 1537, 1726, 1962, 2540
AlwI GGATC 8 cut(s) 607, 623, 1358, 1689, 1796, 2526, 2539, 2767
AlwNI CAGNNNCTG 2 cut(s) 1253, 2015
Ama87I CYCGRG 3 cut(s) 236, 360, 2504
AoxI GGCC 2 cut(s) 251, 1594
ApeKI GCWGC 8 cut(s) 881, 959, 995, 1180, 1250, 1516, 1763, 1826
ApoI RAATTY 4 cut(s) 593, 1005, 1238, 2729
ArsI GACNNNNNNTTYG 2 cut(s) 463, 495
Asp700I GAANNNNTTC 1 cut(s) 1202
AspLEI GCGC 1 cut(s) 2015
AspS9I GGNCC 5 cut(s) 721, 788, 1424, 1604, 2203
AsuC2I CCSGG 2 cut(s) 1693, 2945
AsuHPI GGTGA 3 cut(s) 150, 1537, 2615
AsuNHI GCTAGC 1 cut(s) 1888
AvaI CYCGRG 3 cut(s) 236, 360, 2504
AvaII GGWCC 5 cut(s) 721, 788, 1424, 1604, 2203
BamHI GGATCC 1 cut(s) 2531
BanI GGYRCC 2 cut(s) 761, 2867
BanII GRGCYC 3 cut(s) 1278, 2336, 2720
BarI GAAGNNNNNNTAC 2 cut(s) 1652, 1684
BauI CACGAG 2 cut(s) 1654, 2241
BbsI GAAGAC 1 cut(s) 1840
Bbv12I GWGCWC 3 cut(s) 1326, 2336, 2720
BbvCI CCTCAGC 2 cut(s) 999, 1380
BbvI GCAGC 8 cut(s) 868, 971, 982, 1192, 1237, 1528, 1775, 1838
BciT130I CCWGG 2 cut(s) 886, 2230
BclI TGATCA 1 cut(s) 439
BcnI CCSGG 2 cut(s) 1693, 2945
BcoDI GTCTC 7 cut(s) 1216, 1452, 1472, 1537, 1726, 1962, 2540
BfaI CTAG 8 cut(s) 255, 1125, 1628, 1697, 1889, 1961, 1970, 2270
BfmI CTRYAG 6 cut(s) 582, 957, 1293, 1564, 1776, 2710
BfoI RGCGCY 1 cut(s) 2016
BglII AGATCT 3 cut(s) 968, 1333, 1662
BisI GCNGC 8 cut(s) 882, 960, 996, 1181, 1251, 1517, 1764, 1827
BlpI GCTNAGC 3 cut(s) 2486, 2580, 2691
BlsI GCNGC 8 cut(s) 883, 961, 997, 1182, 1252, 1518, 1765, 1828
BmcAI AGTACT 1 cut(s) 542
Bme1390I CCNGG 4 cut(s) 886, 1693, 2230, 2945
Bme18I GGWCC 5 cut(s) 721, 788, 1424, 1604, 2203
BmeT110I CYCGRG 3 cut(s) 236, 360, 2504
BmgT120I GGNCC 5 cut(s) 721, 788, 1424, 1604, 2203
BmrFI CCNGG 4 cut(s) 886, 1693, 2230, 2945
BmsI GCATC 6 cut(s) 743, 1137, 1625, 2142, 2484, 2617
BmtI GCTAGC 1 cut(s) 1892
BpiI GAAGAC 1 cut(s) 1840
BplI GAGNNNNNCTC 4 cut(s) 1400, 1432, 2323, 2355
BpmI CTGGAG 2 cut(s) 769, 1198
Bpu10I CCTNAGC 3 cut(s) 999, 1380, 2330
Bpu1102I GCTNAGC 3 cut(s) 2486, 2580, 2691
BpuEI CTTGAG 2 cut(s) 417, 2798
BpuMI CCSGG 2 cut(s) 1693, 2945
BsaAI YACGTR 1 cut(s) 1954
BsaBI GATNNNNATC 2 cut(s) 132, 2939
BsaHI GRCGYC 1 cut(s) 818
BsaI GGTCTC 1 cut(s) 1452
BsaJI CCNNGG 7 cut(s) 283, 383, 499, 885, 2229, 2358, 2565
BsaWI WCCGGW 1 cut(s) 2205
BsaXI ACNNNNNCTCC 6 cut(s) 935, 965, 2318, 2348, 2354, 2384
Bsc4I CCNNNNNNNGG 8 cut(s) 285, 1405, 1433, 1457, 1613, 1788, 2386, 2744
Bse118I RCCGGY 1 cut(s) 2870
Bse1I ACTGG 4 cut(s) 752, 1020, 1215, 2559
Bse3DI GCAATG 3 cut(s) 763, 1464, 2516
Bse8I GATNNNNATC 2 cut(s) 132, 2939
BseBI CCWGG 2 cut(s) 886, 2230
BseDI CCNNGG 7 cut(s) 283, 383, 499, 885, 2229, 2358, 2565
BseGI GGATG 6 cut(s) 146, 1648, 2628, 2632, 2818, 2940
BseJI GATNNNNATC 2 cut(s) 132, 2939
BseLI CCNNNNNNNGG 8 cut(s) 285, 1405, 1433, 1457, 1613, 1788, 2386, 2744
BseMI GCAATG 3 cut(s) 763, 1464, 2516
BseNI ACTGG 4 cut(s) 752, 1020, 1215, 2559
BseRI GAGGAG 5 cut(s) 414, 1490, 2145, 2288, 2375
BseXI GCAGC 8 cut(s) 868, 971, 982, 1192, 1237, 1528, 1775, 1838
BsgI GTGCAG 1 cut(s) 1199
BshFI GGCC 2 cut(s) 253, 1596
BshNI GGYRCC 2 cut(s) 761, 2867
BsiHKAI GWGCWC 3 cut(s) 1326, 2336, 2720
BsiHKCI CYCGRG 3 cut(s) 236, 360, 2504
BsiSI CCGG 5 cut(s) 743, 1692, 2206, 2871, 2944
BslFI GGGAC 4 cut(s) 734, 1410, 2159, 2298
BslI CCNNNNNNNGG 8 cut(s) 285, 1405, 1433, 1457, 1613, 1788, 2386, 2744
BsmAI GTCTC 7 cut(s) 1216, 1452, 1472, 1537, 1726, 1962, 2540
BsmBI CGTCTC 1 cut(s) 2540
BsmFI GGGAC 4 cut(s) 734, 1410, 2159, 2298
BsmI GAATGC 1 cut(s) 1104
BsnI GGCC 2 cut(s) 253, 1596
Bso31I GGTCTC 1 cut(s) 1452
BsoBI CYCGRG 3 cut(s) 236, 360, 2504
Bsp1286I GDGCHC 4 cut(s) 1278, 1326, 2336, 2720
Bsp1720I GCTNAGC 3 cut(s) 2486, 2580, 2691
Bsp19I CCATGG 1 cut(s) 383
BspACI CCGC 5 cut(s) 929, 1829, 2188, 2337, 2619
BspANI GGCC 2 cut(s) 253, 1596
BspHI TCATGA 1 cut(s) 2722
BspMAI CTGCAG 2 cut(s) 586, 961
BspOI GCTAGC 1 cut(s) 1892
BspPI GGATC 8 cut(s) 607, 623, 1358, 1689, 1796, 2526, 2539, 2767
BspT107I GGYRCC 2 cut(s) 761, 2867
BspTNI GGTCTC 1 cut(s) 1452
BsrBI CCGCTC 2 cut(s) 929, 2339
BsrDI GCAATG 3 cut(s) 763, 1464, 2516
BsrFI RCCGGY 1 cut(s) 2870
BsrI ACTGG 4 cut(s) 752, 1020, 1215, 2559
BssAI RCCGGY 1 cut(s) 2870
BssECI CCNNGG 7 cut(s) 283, 383, 499, 885, 2229, 2358, 2565
BssNAI GTATAC 1 cut(s) 954
BssNI GRCGYC 1 cut(s) 818
BssSI CACGAG 2 cut(s) 1654, 2241
BssT1I CCWWGG 3 cut(s) 283, 383, 2565
Bst1107I GTATAC 1 cut(s) 954
Bst2BI CACGAG 2 cut(s) 1654, 2241
Bst2UI CCWGG 2 cut(s) 886, 2230
Bst6I CTCTTC 3 cut(s) 801, 1249, 2030
BstACI GRCGYC 1 cut(s) 818
BstBAI YACGTR 1 cut(s) 1954
BstC8I GCNNGC 2 cut(s) 1783, 1890
BstDSI CCRYGG 1 cut(s) 383
BstEII GGTNACC 1 cut(s) 2324
BstF5I GGATG 6 cut(s) 146, 1648, 2628, 2632, 2818, 2940
BstH2I RGCGCY 1 cut(s) 2016
BstHHI GCGC 1 cut(s) 2015
BstMAI GTCTC 7 cut(s) 1216, 1452, 1472, 1537, 1726, 1962, 2540
BstMWI GCNNNNNNNGC 3 cut(s) 1559, 2515, 2576
BstNI CCWGG 2 cut(s) 886, 2230
BstNSI RCATGY 2 cut(s) 627, 1613
BstPI GGTNACC 1 cut(s) 2324
BstSCI CCNGG 4 cut(s) 884, 1691, 2228, 2943
BstSFI CTRYAG 6 cut(s) 582, 957, 1293, 1564, 1776, 2710
BstV1I GCAGC 8 cut(s) 868, 971, 982, 1192, 1237, 1528, 1775, 1838
BstV2I GAAGAC 1 cut(s) 1840
BstX2I RGATCY 6 cut(s) 968, 1333, 1662, 1681, 2531, 2772
BstXI CCANNNNNNTGG 2 cut(s) 390, 2321
BstYI RGATCY 6 cut(s) 968, 1333, 1662, 1681, 2531, 2772
BstZ17I GTATAC 1 cut(s) 954
BsuRI GGCC 2 cut(s) 253, 1596
BtgI CCRYGG 1 cut(s) 383
BtgZI GCGATG 1 cut(s) 1534
BtsCI GGATG 6 cut(s) 146, 1648, 2628, 2632, 2818, 2940
Cac8I GCNNGC 2 cut(s) 1783, 1890
CaiI CAGNNNCTG 2 cut(s) 1253, 2015
CciI TCATGA 1 cut(s) 2722
CfoI GCGC 1 cut(s) 2015
Cfr10I RCCGGY 1 cut(s) 2870
Cfr13I GGNCC 5 cut(s) 721, 788, 1424, 1604, 2203
CseI GACGC 1 cut(s) 807
Csp6I GTAC 7 cut(s) 345, 541, 1073, 1231, 1580, 1669, 1818
CviQI GTAC 7 cut(s) 345, 541, 1073, 1231, 1580, 1669, 1818
DraI TTTAAA 2 cut(s) 519, 835
DraIII CACNNNGTG 2 cut(s) 164, 2171
Eam1104I CTCTTC 3 cut(s) 801, 1249, 2030
EarI CTCTTC 3 cut(s) 801, 1249, 2030
Ecl136II GAGCTC 2 cut(s) 2334, 2718
Eco130I CCWWGG 3 cut(s) 283, 383, 2565
Eco147I AGGCCT 1 cut(s) 1596
Eco24I GRGCYC 3 cut(s) 1278, 2336, 2720
Eco31I GGTCTC 1 cut(s) 1452
Eco47I GGWCC 5 cut(s) 721, 788, 1424, 1604, 2203
Eco53kI GAGCTC 2 cut(s) 2334, 2718
Eco57I CTGAAG 6 cut(s) 416, 1230, 1264, 1385, 1815, 2037
Eco88I CYCGRG 3 cut(s) 236, 360, 2504
Eco91I GGTNACC 1 cut(s) 2324
EcoICRI GAGCTC 2 cut(s) 2334, 2718
EcoO109I RGGNCCY 1 cut(s) 1424
EcoO65I GGTNACC 1 cut(s) 2324
EcoRII CCWGG 2 cut(s) 884, 2228
EcoT14I CCWWGG 3 cut(s) 283, 383, 2565
EcoT38I GRGCYC 3 cut(s) 1278, 2336, 2720
ErhI CCWWGG 3 cut(s) 283, 383, 2565
Esp3I CGTCTC 1 cut(s) 2540
FalI AAGNNNNNCTT 2 cut(s) 2568, 2600
FaqI GGGAC 4 cut(s) 734, 1410, 2159, 2298
FauI CCCGC 3 cut(s) 1822, 2181, 2612
FbaI TGATCA 1 cut(s) 439
FblI GTMKAC 1 cut(s) 953
Fnu4HI GCNGC 8 cut(s) 882, 960, 996, 1181, 1251, 1517, 1764, 1827
FokI GGATG 6 cut(s) 133, 1655, 2635, 2639, 2825, 2927
FriOI GRGCYC 3 cut(s) 1278, 2336, 2720
Fsp4HI GCNGC 8 cut(s) 882, 960, 996, 1181, 1251, 1517, 1764, 1827
FspBI CTAG 8 cut(s) 255, 1125, 1628, 1697, 1889, 1961, 1970, 2270
GlaI GCGC 1 cut(s) 2014
GluI GCNGC 8 cut(s) 882, 960, 996, 1181, 1251, 1517, 1764, 1827
GsuI CTGGAG 2 cut(s) 769, 1198
HaeII RGCGCY 1 cut(s) 2016
HaeIII GGCC 2 cut(s) 253, 1596
HapII CCGG 5 cut(s) 743, 1692, 2206, 2871, 2944
HgaI GACGC 1 cut(s) 807
HhaI GCGC 1 cut(s) 2015
Hin1I GRCGYC 1 cut(s) 818
Hin6I GCGC 1 cut(s) 2013
HinP1I GCGC 1 cut(s) 2013
HincII GTYRAC 1 cut(s) 2377
HindII GTYRAC 1 cut(s) 2377
HindIII AAGCTT 3 cut(s) 726, 829, 1299
HpaII CCGG 5 cut(s) 743, 1692, 2206, 2871, 2944
HphI GGTGA 3 cut(s) 150, 1537, 2615
HpyCH4IV ACGT 3 cut(s) 1953, 2063, 2549
HpyF10VI GCNNNNNNNGC 3 cut(s) 1559, 2515, 2576
HpySE526I ACGT 3 cut(s) 1953, 2063, 2549
Hsp92I GRCGYC 1 cut(s) 818
HspAI GCGC 1 cut(s) 2013
KflI GGGWCCC 1 cut(s) 1424
Ksp22I TGATCA 1 cut(s) 439
LmnI GCTCC 4 cut(s) 364, 1524, 2339, 2715
Lsp1109I GCAGC 8 cut(s) 868, 971, 982, 1192, 1237, 1528, 1775, 1838
LweI GCATC 6 cut(s) 743, 1137, 1625, 2142, 2484, 2617
MaeI CTAG 8 cut(s) 255, 1125, 1628, 1697, 1889, 1961, 1970, 2270
MaeII ACGT 3 cut(s) 1953, 2063, 2549
MaeIII GTNAC 6 cut(s) 156, 413, 796, 2005, 2139, 2324
MbiI CCGCTC 2 cut(s) 929, 2339
MflI RGATCY 6 cut(s) 968, 1333, 1662, 1681, 2531, 2772
MhlI GDGCHC 4 cut(s) 1278, 1326, 2336, 2720
MlyI GAGTC 6 cut(s) 1051, 1218, 1302, 1474, 1873, 2788
MmeI TCCRAC 1 cut(s) 1267
MroXI GAANNNNTTC 1 cut(s) 1202
MseI TTAA 7 cut(s) 6, 518, 813, 834, 978, 1907, 2986
MslI CAYNNNNRTG 4 cut(s) 182, 388, 737, 1744
MspA1I CMGCKG 2 cut(s) 1250, 1829
MspI CCGG 5 cut(s) 743, 1692, 2206, 2871, 2944
MspR9I CCNGG 4 cut(s) 886, 1693, 2230, 2945
Mva1269I GAATGC 1 cut(s) 1104
MvaI CCWGG 2 cut(s) 886, 2230
MwoI GCNNNNNNNGC 3 cut(s) 1559, 2515, 2576
NciI CCSGG 2 cut(s) 1693, 2945
NcoI CCATGG 1 cut(s) 383
NheI GCTAGC 1 cut(s) 1888
NmeAIII GCCGAG 1 cut(s) 2383
NmuCI GTSAC 3 cut(s) 156, 796, 2005
NspI RCATGY 2 cut(s) 627, 1613
OliI CACNNNNGTG 1 cut(s) 737
PagI TCATGA 1 cut(s) 2722
PceI AGGCCT 1 cut(s) 1596
PciI ACATGT 1 cut(s) 1609
PctI GAATGC 1 cut(s) 1104
PdmI GAANNNNTTC 1 cut(s) 1202
PflFI GACNNNGTC 1 cut(s) 1311
PflMI CCANNNNNTGG 3 cut(s) 1457, 1613, 2744
PfoI TCCNGGA 1 cut(s) 2943
PkrI GCNGC 8 cut(s) 883, 961, 997, 1182, 1252, 1518, 1765, 1828
PleI GAGTC 6 cut(s) 1050, 1217, 1302, 1474, 1873, 2788
PpsI GAGTC 6 cut(s) 1050, 1217, 1302, 1474, 1873, 2788
Ppu21I YACGTR 1 cut(s) 1954
PpuMI RGGWCCY 1 cut(s) 1424
PscI ACATGT 1 cut(s) 1609
Psp124BI GAGCTC 2 cut(s) 2336, 2720
Psp5II RGGWCCY 1 cut(s) 1424
Psp6I CCWGG 2 cut(s) 884, 2228
PspEI GGTNACC 1 cut(s) 2324
PspGI CCWGG 2 cut(s) 884, 2228
PspPI GGNCC 5 cut(s) 721, 788, 1424, 1604, 2203
PspPPI RGGWCCY 1 cut(s) 1424
PsrI GAACNNNNNNTAC 2 cut(s) 2442, 2474
PstI CTGCAG 2 cut(s) 586, 961
PstNI CAGNNNCTG 2 cut(s) 1253, 2015
PsuI RGATCY 6 cut(s) 968, 1333, 1662, 1681, 2531, 2772
PsyI GACNNNGTC 1 cut(s) 1311
PvuII CAGCTG 1 cut(s) 1250
RsaI GTAC 7 cut(s) 346, 542, 1074, 1232, 1581, 1670, 1819
RsaNI GTAC 7 cut(s) 345, 541, 1073, 1231, 1580, 1669, 1818
RseI CAYNNNNRTG 4 cut(s) 182, 388, 737, 1744
SacI GAGCTC 2 cut(s) 2336, 2720
SaqAI TTAA 7 cut(s) 6, 518, 813, 834, 978, 1907, 2986
SatI GCNGC 8 cut(s) 882, 960, 996, 1181, 1251, 1517, 1764, 1827
Sau96I GGNCC 5 cut(s) 721, 788, 1424, 1604, 2203
ScaI AGTACT 1 cut(s) 542
SchI GAGTC 6 cut(s) 1051, 1218, 1302, 1474, 1873, 2788
ScrFI CCNGG 4 cut(s) 886, 1693, 2230, 2945
SduI GDGCHC 4 cut(s) 1278, 1326, 2336, 2720
SfaNI GCATC 6 cut(s) 743, 1137, 1625, 2142, 2484, 2617
SfcI CTRYAG 6 cut(s) 582, 957, 1293, 1564, 1776, 2710
SinI GGWCC 5 cut(s) 721, 788, 1424, 1604, 2203
SmiMI CAYNNNNRTG 4 cut(s) 182, 388, 737, 1744
SmlI CTYRAG 2 cut(s) 432, 2777
SmoI CTYRAG 2 cut(s) 432, 2777
SseBI AGGCCT 1 cut(s) 1596
SsiI CCGC 5 cut(s) 929, 1829, 2188, 2337, 2619
SspMI CTAG 8 cut(s) 255, 1125, 1628, 1697, 1889, 1961, 1970, 2270
SstI GAGCTC 2 cut(s) 2336, 2720
StuI AGGCCT 1 cut(s) 1596
StyD4I CCNGG 4 cut(s) 884, 1691, 2228, 2943
StyI CCWWGG 3 cut(s) 283, 383, 2565
TaiI ACGT 3 cut(s) 1956, 2066, 2552
TaqI TCGA 3 cut(s) 1648, 1744, 2073
TaqII GACCGA 1 cut(s) 1301
TatI WGTACW 5 cut(s) 344, 540, 1230, 1579, 1817
Tru1I TTAA 7 cut(s) 6, 518, 813, 834, 978, 1907, 2986
Tru9I TTAA 7 cut(s) 6, 518, 813, 834, 978, 1907, 2986
TseFI GTSAC 3 cut(s) 156, 796, 2005
TseI GCWGC 8 cut(s) 881, 959, 995, 1180, 1250, 1516, 1763, 1826
Tsp45I GTSAC 3 cut(s) 156, 796, 2005
TspDTI ATGAA 9 cut(s) 166, 240, 606, 819, 1334, 2067, 2081, 2389, 2637
TspGWI ACGGA 2 cut(s) 87, 1202
Tth111I GACNNNGTC 1 cut(s) 1311
Van91I CCANNNNNTGG 3 cut(s) 1457, 1613, 2744
VpaK11BI GGWCC 5 cut(s) 721, 788, 1424, 1604, 2203
XapI RAATTY 4 cut(s) 593, 1005, 1238, 2729
XceI RCATGY 2 cut(s) 627, 1613
XmiI GTMKAC 1 cut(s) 953
XmnI GAANNNNTTC 1 cut(s) 1202
XspI CTAG 8 cut(s) 255, 1125, 1628, 1697, 1889, 1961, 1970, 2270
ZrmI AGTACT 1 cut(s) 542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.