Rh2CG374700

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0009628
Physical Location & Seq
Forward (+)
50883150 .. 50886863
3714 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG374700.1

Sequence Viewer

Length: 3207 bp
ATGATCATGAAGATTGCATCTTTGGTTATTGTTTGGATTGTGTATGGGTTGTTGGGTTTGGGGTTCACATATTCATACCCTACTTCAGCATTTGATGATCTCAGAAATGAAAGAAGTGAAACCACCGTCACTTATAGCTATGATAGAATGGATGAAGTGAAGAAAGCATGTGGGTTTGTTCTATCTTCTGCTTCAGAACTGAAAGCTGAAGATGAGAGAGTATATAGGATGAAGAAGGAGCTCCTTTTTGTTAATGGGGATTGGAGGCAGGAGGTGGGTAAGGATCCAATCATGCCATTTGATGATAGAGAAGTTCAGAGTGAGTTTTTGGGTAATAGAACTCCGTCGAACTTGGCTTCGTTTTGGCTTATGGATATTGATCGTGCCCATCGATCCAAGAAGTCACTAAGTGTTAGTGGATTCATGGTTATGGGTATTACTATAGATGGTAGCTTTATGGATTATGGGTATCAAGGGAATCCCGAGTTCCAAATGTGGGCTAGCCATTCTCAAATTACAATTTCCTTCCAAGGGATTTATACTGAAACCAAGAAGAATGGTGGCGAAAGAGTGATGTGCTTGTTGGGGAGTACAATGTTGCCGTCTCGGGAGCCTGATTCTGCTAATCCATGGGAGTGGCTGAAGGCTTCTGATTCAAGTAATCAACCTCCTCTTTCTCAAGATGATCAGATTCTACTTGTTCTTCACTTTCCGATGACTTTCAATTTGACAAATAGGGCTATCCGAGGGGAAATGAGAAGTTTAAATCCAAAGTCAAACTCAAAGTACTTTGATGAGGTTCACATTTTATCACAGTTGGGGAAGTCTGTAGTGTATAAATTTGGATCAGAAAAGATTGTTTCTAGAGCATGTGATCCATACCCTTCTAATGATAGCTTGGTATATGGTGGCATTAGCAACTACAAAGGTCATGCTATTTGCGAAATCCTTGACGAAGTTGCAAAGGACCAAGCTTTCACTGTTGTGCCGAACTGGAGATGCAATGGCACCGATGAGTTTTGCAGTAAGTTAGGTCCATTTGTGACAGATAAAGAGATTAAGGCGTCAGACGGAAGCTTTAAAGGTGTTAAGCTTTACATGCAGGAAATCAAGTGTGAACAAAAAGCTGCCAGGGGAAATGCCAGTTCTGCAAGGGTTTCAGCTGTATTTAGAGCTGTTTCTCCGATGGAGAATCTATATACTGCAGCAAAGAGATCCGGGCTTAACAACATGACTGTTGCTGCTGAGGGAATTTGGAAATCTACCAGTGGACAGCTTTGCATGGTTGGTTGCCTTGGACTTGTTGATGTTGTAGGGAGTCAATGCAATACTCGGATATGTATGTATGTACCTACCTCTTTCTCCATAAAGCAACGAAGCATTCTTTATGGAAGTTTCTCTAGCATCAATGATAGTGGTACATCATATTTTCCTCTCTCGTTTGAAAAGTTAGTGCAGCCTTCGGAACTGTGGAATTATTTCAGAGTCTCCAGTCCAAACTACAAGTACACAAAAATCTATTCAGCTGCTGTTGTCTTAGAAAAAAACGAGCCCTTCAGTGTTGGAACTGTGATCAAGAAATCTTTTCTGAGTTTTCCCAAACTGGAAGACGCAGAAGCTTTTGAACTCAGTCTTTCTGTTCTCTCCGAAGATCTAACCCTTCATGTGTCTGCATTTCCCGATCCAATTCCGAAGCCTCAGCCTCCAAGAGTAGACCTTCAGATGGAGATTCTCTCAGTGGGTCCCTTGTTTGGACGCTATTGGTCTCCACAAAATGGTTCCATTGCACAAGAGGAGACTCCTTACCACACAAAGTCTGAATACACTGAAAAGCAGCTCCTTCTAAATGTATCAGCACAACTCAACATCGCCGGAAACGCCTATAGCAATCTTTCTGTGCTATATTTGGAAGGCCTTTATGATCCACATGTTGGAAAGATGTATCTAGTTGGATGCAGGGACGTTCGAGCCTCGTGGAAGATCTTGTATGAGAGCATGGATCTTGAAGCCGGGCTAGATTGTTTGGTTGAGGTGGTTGTGGCTTATCCTCCCACTACATCTCGATGGTTAGTCAATCCAGCAGCCCATATTTCTGTAGCCAGCCAAAGGACTGAAGATGATCCTCTTTACTTCAGTACAGTCAAGCTCCAAACTCTTCCAATTATGTACAGGAAGCAGCGGGAAGACATTCTCTCTCGTCGGGGGATTGAGGGAATCCTCCGAGTTTTGACTCTTTCACTAGCAATATGTGGAATTTTAAGCCAACTGTTTTACATCAGGTATAATGTGGATTCTGTTCCTTACATGTCTCTAGTCATGCTCAGTATTCAAGCCATTGGGTATAGCATTCCTCTGGTCACAGGCGCTGAAGCACTCTTCAAGAAGTTAGCTTCTGAATCCTATGAAACATCAACATATGACCTTGATAACAGTCGGTGGTTTCATATACTTGATTACACGGTTAAGCTTCTTCTGATGGCCTCATTGTTACTGACTTTAAGACTTTGTCAGAAAGTGTGGAAATCTCGCATCAGGTTACTTGCACAAACTCCGCTTGAACCACATCGTGTACCTAATGATAAGCGGGTGCTTATAACCACCTCAGCAATACATTTGATTGGCTATGTAATGGTTCTAGTCATTCATAGTATGAGGACCGGCCAAAGATCTATCCGGACGAAAAGCTATAAAATTGCCAGGGAAGAATCTCGTGGACCAGGGGAATGGGAAACTGAACTTGAGGAGTATGTGGGACTTGTCCAAGATTTTTTCCTACTCCCCCAGATGATTGGTAACCTGGTGTGGCAGATTGATTGTAAACCACTCAGAAAATTTTATTTCGTTGGGATCACACTGGTCAGACTCTTTCCCCACATTTATGATTATGTTAGAGCTCCGTCTCTCAACCCTTACTTTGCCGAGGAGTATGACTTTGTCAACCCAAGTTCGGACTTTTACTCCAAGTTTGGGGATATCGCCATACCTATTACAGCAATTCTCCTTGCAGTTGTAGTCTATGTTCAGCAGAGGTGGAATTATGAGAGGCTGAGCAAGATGCTTACTTTCGGGCAATGTAGGCTTCTTCCTTTGGGTTCCAGAATGTATGAGAGGTTGCCTTCCAGTTCCAAGGCATTCGAAGCTGAGCTTGTTTCTGGTGTCAATGGTAATGCTAGACAAGAGAACAAAGAGAGTGATGATGTAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2921

Protein Analysis

1068

Amino Acids

120.81

Weight (kDa)

6.46

Isoelectric Point (pI)

40.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 53 - 268 2.4e-34 DUF2921 lipocalin-like domain
DUF2921_N PF25333 287 - 477 1.5e-42 DUF2921 lipocalin-like domain
DUF2921_N PF25333 517 - 714 5.2e-35 DUF2921 lipocalin-like domain
DUF2921 PF11145 726 - 1013 1.2e-59 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2594
AccB1I GGYRCC 1 cut(s) 1007
AccB7I CCANNNNNTGG 2 cut(s) 1775, 1931
AccI GTMKAC 1 cut(s) 1713
AccIII TCCGGA 1 cut(s) 2673
AciI CCGC 3 cut(s) 2179, 2552, 2584
AcoI YGGCCR 1 cut(s) 2659
AcsI RAATTY 4 cut(s) 839, 1251, 2253, 2831
AcuI CTGAAG 9 cut(s) 69, 177, 228, 662, 1540, 1703, 2116, 2133, 2388
AcyI GRCGYC 1 cut(s) 1064
AdeI CACNNNGTG 2 cut(s) 410, 2567
AfaI GTAC 8 cut(s) 592, 788, 1350, 1420, 1508, 2137, 2168, 2571
AfiI CCNNNNNNNGG 9 cut(s) 496, 531, 1723, 1751, 1775, 1931, 2106, 2947, 2967
AflIII ACRYGT 2 cut(s) 1927, 2304
AgsI TTSAA 8 cut(s) 657, 724, 1445, 1625, 2006, 2330, 2380, 2558
AjnI CCWGG 4 cut(s) 1130, 2696, 2716, 2796
AleI CACNNNNGTG 1 cut(s) 983
Alw21I GWGCWC 2 cut(s) 243, 2896
Alw26I GTCTC 6 cut(s) 609, 1492, 1770, 1790, 2313, 2904
AlwNI CAGNNNCTG 2 cut(s) 1529, 2366
Ama87I CYCGRG 2 cut(s) 482, 606
Aor13HI TCCGGA 1 cut(s) 2673
AoxI GGCC 3 cut(s) 1912, 2478, 2659
ApeKI GCWGC 8 cut(s) 1127, 1205, 1241, 1456, 1526, 1834, 2081, 2176
ApoI RAATTY 4 cut(s) 839, 1251, 2253, 2831
ArsI GACNNNNNNTTYG 2 cut(s) 709, 741
Asp700I GAANNNNTTC 2 cut(s) 1478, 2187
AspLEI GCGC 1 cut(s) 2366
AspS9I GGNCC 5 cut(s) 967, 1034, 1742, 2655, 2714
AsuC2I CCSGG 2 cut(s) 1219, 2011
AsuII TTCGAA 1 cut(s) 3135
AsuNHI GCTAGC 1 cut(s) 500
AvaI CYCGRG 2 cut(s) 482, 606
AvaII GGWCC 5 cut(s) 967, 1034, 1742, 2655, 2714
BaeGI GKGCMC 1 cut(s) 388
BamHI GGATCC 1 cut(s) 283
BanI GGYRCC 1 cut(s) 1007
BanII GRGCYC 3 cut(s) 243, 1554, 2896
BauI CACGAG 2 cut(s) 1972, 2709
BbsI GAAGAC 2 cut(s) 1614, 2190
Bbv12I GWGCWC 2 cut(s) 243, 2896
BbvCI CCTCAGC 3 cut(s) 1245, 1698, 2602
BbvI GCAGC 8 cut(s) 1114, 1217, 1228, 1468, 1513, 1846, 2093, 2188
BccI CCATC 6 cut(s) 396, 440, 1180, 1717, 2058, 2470
BceAI ACGGC 1 cut(s) 586
BciT130I CCWGG 4 cut(s) 1132, 2698, 2718, 2798
BclI TGATCA 3 cut(s) 3, 685, 1572
BcnI CCSGG 2 cut(s) 1219, 2011
BcoDI GTCTC 6 cut(s) 609, 1492, 1770, 1790, 2313, 2904
BfaI CTAG 9 cut(s) 501, 864, 1401, 1946, 2015, 2240, 2312, 2636, 3171
BfmI CTRYAG 5 cut(s) 441, 828, 1203, 1882, 2094
BfoI RGCGCY 1 cut(s) 2367
BglII AGATCT 3 cut(s) 1651, 1980, 2666
BisI GCNGC 8 cut(s) 1128, 1206, 1242, 1457, 1527, 1835, 2082, 2177
BlpI GCTNAGC 2 cut(s) 3047, 3141
BlsI GCNGC 8 cut(s) 1129, 1207, 1243, 1458, 1528, 1836, 2083, 2178
BmcAI AGTACT 1 cut(s) 788
Bme1390I CCNGG 6 cut(s) 1132, 1219, 2011, 2698, 2718, 2798
Bme18I GGWCC 5 cut(s) 967, 1034, 1742, 2655, 2714
BmeT110I CYCGRG 2 cut(s) 482, 606
BmgT120I GGNCC 5 cut(s) 967, 1034, 1742, 2655, 2714
BmiI GGNNCC 7 cut(s) 285, 612, 1009, 1743, 1744, 1780, 3094
BmrFI CCNGG 6 cut(s) 1132, 1219, 2011, 2698, 2718, 2798
BmsI GCATC 6 cut(s) 26, 989, 1413, 1943, 2538, 3045
BmtI GCTAGC 1 cut(s) 504
BpiI GAAGAC 2 cut(s) 1614, 2190
BplI GAGNNNNNCTC 2 cut(s) 1718, 1750
BpmI CTGGAG 2 cut(s) 1015, 1474
Bpu10I CCTNAGC 3 cut(s) 1245, 1698, 2602
Bpu1102I GCTNAGC 2 cut(s) 3047, 3141
Bpu14I TTCGAA 1 cut(s) 3135
BpuEI CTTGAG 2 cut(s) 663, 2759
BpuMI CCSGG 2 cut(s) 1219, 2011
Bsa29I ATCGAT 1 cut(s) 391
BsaBI GATNNNNATC 1 cut(s) 378
BsaHI GRCGYC 1 cut(s) 1064
BsaI GGTCTC 1 cut(s) 1770
BsaJI CCNNGG 9 cut(s) 529, 629, 745, 1131, 1294, 2697, 2717, 2919, 3126
BsaWI WCCGGW 1 cut(s) 2673
BsaXI ACNNNNNCTCC 2 cut(s) 2942, 2972
Bsc4I CCNNNNNNNGG 9 cut(s) 496, 531, 1723, 1751, 1775, 1931, 2106, 2947, 2967
Bse118I RCCGGY 1 cut(s) 2657
Bse1I ACTGG 7 cut(s) 998, 1143, 1266, 1491, 1608, 2859, 3120
Bse3DI GCAATG 3 cut(s) 1009, 1782, 3077
Bse8I GATNNNNATC 1 cut(s) 378
BseAI TCCGGA 1 cut(s) 2673
BseBI CCWGG 4 cut(s) 1132, 2698, 2718, 2798
BseCI ATCGAT 1 cut(s) 391
BseDI CCNNGG 9 cut(s) 529, 629, 745, 1131, 1294, 2697, 2717, 2919, 3126
BseGI GGATG 3 cut(s) 157, 234, 1958
BseJI GATNNNNATC 1 cut(s) 378
BseLI CCNNNNNNNGG 9 cut(s) 496, 531, 1723, 1751, 1775, 1931, 2106, 2947, 2967
BseMI GCAATG 3 cut(s) 1009, 1782, 3077
BseNI ACTGG 7 cut(s) 998, 1143, 1266, 1491, 1608, 2859, 3120
BseRI GAGGAG 4 cut(s) 660, 1808, 2756, 2936
BseSI GKGCMC 1 cut(s) 388
BseXI GCAGC 8 cut(s) 1114, 1217, 1228, 1468, 1513, 1846, 2093, 2188
BsgI GTGCAG 1 cut(s) 1475
BshFI GGCC 3 cut(s) 1914, 2480, 2661
BshNI GGYRCC 1 cut(s) 1007
BshVI ATCGAT 1 cut(s) 391
BsiHKAI GWGCWC 2 cut(s) 243, 2896
BsiHKCI CYCGRG 2 cut(s) 482, 606
BsiSI CCGG 5 cut(s) 1218, 1872, 2010, 2658, 2674
BslFI GGGAC 3 cut(s) 1728, 1973, 2766
BslI CCNNNNNNNGG 9 cut(s) 496, 531, 1723, 1751, 1775, 1931, 2106, 2947, 2967
BsmAI GTCTC 6 cut(s) 609, 1492, 1770, 1790, 2313, 2904
BsmBI CGTCTC 2 cut(s) 609, 2904
BsmFI GGGAC 3 cut(s) 1728, 1973, 2766
BsmI GAATGC 3 cut(s) 1380, 2346, 3131
BsnI GGCC 3 cut(s) 1914, 2480, 2661
Bso31I GGTCTC 1 cut(s) 1770
BsoBI CYCGRG 2 cut(s) 482, 606
Bsp119I TTCGAA 1 cut(s) 3135
Bsp1286I GDGCHC 4 cut(s) 243, 388, 1554, 2896
Bsp13I TCCGGA 1 cut(s) 2673
Bsp1407I TGTACA 1 cut(s) 2166
Bsp1720I GCTNAGC 2 cut(s) 3047, 3141
Bsp19I CCATGG 1 cut(s) 629
BspACI CCGC 3 cut(s) 2179, 2552, 2584
BspANI GGCC 3 cut(s) 1914, 2480, 2661
BspDI ATCGAT 1 cut(s) 391
BspEI TCCGGA 1 cut(s) 2673
BspHI TCATGA 1 cut(s) 6
BspLI GGNNCC 7 cut(s) 285, 612, 1009, 1743, 1744, 1780, 3094
BspMAI CTGCAG 1 cut(s) 1207
BspOI GCTAGC 1 cut(s) 504
BspT104I TTCGAA 1 cut(s) 3135
BspT107I GGYRCC 1 cut(s) 1007
BspTNI GGTCTC 1 cut(s) 1770
BsrDI GCAATG 3 cut(s) 1009, 1782, 3077
BsrFI RCCGGY 1 cut(s) 2657
BsrGI TGTACA 1 cut(s) 2166
BsrI ACTGG 7 cut(s) 998, 1143, 1266, 1491, 1608, 2859, 3120
BssAI RCCGGY 1 cut(s) 2657
BssECI CCNNGG 9 cut(s) 529, 629, 745, 1131, 1294, 2697, 2717, 2919, 3126
BssNI GRCGYC 1 cut(s) 1064
BssSI CACGAG 2 cut(s) 1972, 2709
BssT1I CCWWGG 4 cut(s) 529, 629, 1294, 3126
Bst2BI CACGAG 2 cut(s) 1972, 2709
Bst2UI CCWGG 4 cut(s) 1132, 2698, 2718, 2798
Bst6I CTCTTC 2 cut(s) 2160, 2381
BstACI GRCGYC 1 cut(s) 1064
BstAUI TGTACA 1 cut(s) 2166
BstBI TTCGAA 1 cut(s) 3135
BstC8I GCNNGC 2 cut(s) 502, 2101
BstDSI CCRYGG 1 cut(s) 629
BstEII GGTNACC 1 cut(s) 2792
BstF5I GGATG 3 cut(s) 157, 234, 1958
BstH2I RGCGCY 1 cut(s) 2367
BstHHI GCGC 1 cut(s) 2366
BstMAI GTCTC 6 cut(s) 609, 1492, 1770, 1790, 2313, 2904
BstMWI GCNNNNNNNGC 5 cut(s) 1099, 1148, 1877, 3076, 3137
BstNI CCWGG 4 cut(s) 1132, 2698, 2718, 2798
BstNSI RCATGY 5 cut(s) 171, 873, 1102, 1931, 2308
BstPI GGTNACC 1 cut(s) 2792
BstSCI CCNGG 6 cut(s) 1130, 1217, 2009, 2696, 2716, 2796
BstSFI CTRYAG 5 cut(s) 441, 828, 1203, 1882, 2094
BstSLI GKGCMC 1 cut(s) 388
BstV1I GCAGC 8 cut(s) 1114, 1217, 1228, 1468, 1513, 1846, 2093, 2188
BstV2I GAAGAC 2 cut(s) 1614, 2190
BstX2I RGATCY 6 cut(s) 283, 1214, 1651, 1980, 1999, 2666
BstXI CCANNNNNNTGG 3 cut(s) 636, 2724, 2789
BstYI RGATCY 6 cut(s) 283, 1214, 1651, 1980, 1999, 2666
Bsu15I ATCGAT 1 cut(s) 391
BsuRI GGCC 3 cut(s) 1914, 2480, 2661
BsuTUI ATCGAT 1 cut(s) 391
BtgI CCRYGG 1 cut(s) 629
BtgZI GCGATG 1 cut(s) 1852
BtsCI GGATG 3 cut(s) 157, 234, 1958
BtsIMutI CAGTG 6 cut(s) 978, 1273, 1564, 1743, 1824, 2852
Cac8I GCNNGC 2 cut(s) 502, 2101
CaiI CAGNNNCTG 2 cut(s) 1529, 2366
CciI TCATGA 1 cut(s) 6
CfoI GCGC 1 cut(s) 2366
Cfr10I RCCGGY 1 cut(s) 2657
Cfr13I GGNCC 5 cut(s) 967, 1034, 1742, 2655, 2714
ClaI ATCGAT 1 cut(s) 391
CseI GACGC 3 cut(s) 1053, 1619, 1764
CsiI ACCWGGT 1 cut(s) 2796
Csp6I GTAC 8 cut(s) 591, 787, 1349, 1419, 1507, 2136, 2167, 2570
CspCI CAANNNNNGTGG 2 cut(s) 1396, 1431
CviQI GTAC 8 cut(s) 591, 787, 1349, 1419, 1507, 2136, 2167, 2570
DraI TTTAAA 2 cut(s) 765, 1081
DraIII CACNNNGTG 2 cut(s) 410, 2567
EaeI YGGCCR 1 cut(s) 2659
Eam1104I CTCTTC 2 cut(s) 2160, 2381
EarI CTCTTC 2 cut(s) 2160, 2381
Ecl136II GAGCTC 2 cut(s) 241, 2894
Eco130I CCWWGG 4 cut(s) 529, 629, 1294, 3126
Eco147I AGGCCT 1 cut(s) 1914
Eco24I GRGCYC 3 cut(s) 243, 1554, 2896
Eco31I GGTCTC 1 cut(s) 1770
Eco32I GATATC 1 cut(s) 2974
Eco47I GGWCC 5 cut(s) 967, 1034, 1742, 2655, 2714
Eco53kI GAGCTC 2 cut(s) 241, 2894
Eco57I CTGAAG 9 cut(s) 69, 177, 228, 662, 1540, 1703, 2116, 2133, 2388
Eco88I CYCGRG 2 cut(s) 482, 606
Eco91I GGTNACC 1 cut(s) 2792
EcoICRI GAGCTC 2 cut(s) 241, 2894
EcoO109I RGGNCCY 1 cut(s) 1742
EcoO65I GGTNACC 1 cut(s) 2792
EcoRII CCWGG 4 cut(s) 1130, 2696, 2716, 2796
EcoRV GATATC 1 cut(s) 2974
EcoT14I CCWWGG 4 cut(s) 529, 629, 1294, 3126
EcoT38I GRGCYC 3 cut(s) 243, 1554, 2896
ErhI CCWWGG 4 cut(s) 529, 629, 1294, 3126
Esp3I CGTCTC 2 cut(s) 609, 2904
FalI AAGNNNNNCTT 2 cut(s) 3129, 3161
FaqI GGGAC 3 cut(s) 1728, 1973, 2766
FauI CCCGC 2 cut(s) 2172, 2577
FauNDI CATATG 1 cut(s) 2416
FbaI TGATCA 3 cut(s) 3, 685, 1572
FblI GTMKAC 1 cut(s) 1713
Fnu4HI GCNGC 8 cut(s) 1128, 1206, 1242, 1457, 1527, 1835, 2082, 2177
FokI GGATG 3 cut(s) 164, 241, 1965
FriOI GRGCYC 3 cut(s) 243, 1554, 2896
Fsp4HI GCNGC 8 cut(s) 1128, 1206, 1242, 1457, 1527, 1835, 2082, 2177
FspBI CTAG 9 cut(s) 501, 864, 1401, 1946, 2015, 2240, 2312, 2636, 3171
GlaI GCGC 1 cut(s) 2365
GluI GCNGC 8 cut(s) 1128, 1206, 1242, 1457, 1527, 1835, 2082, 2177
GsuI CTGGAG 2 cut(s) 1015, 1474
HaeII RGCGCY 1 cut(s) 2367
HaeIII GGCC 3 cut(s) 1914, 2480, 2661
HapII CCGG 5 cut(s) 1218, 1872, 2010, 2658, 2674
HgaI GACGC 3 cut(s) 1053, 1619, 1764
HhaI GCGC 1 cut(s) 2366
Hin1I GRCGYC 1 cut(s) 1064
Hin6I GCGC 1 cut(s) 2364
HinP1I GCGC 1 cut(s) 2364
HincII GTYRAC 1 cut(s) 2938
HindII GTYRAC 1 cut(s) 2938
HindIII AAGCTT 5 cut(s) 972, 1075, 1091, 1617, 2465
HpaII CCGG 5 cut(s) 1218, 1872, 2010, 2658, 2674
Hpy99I CGWCG 2 cut(s) 349, 2202
HpyCH4IV ACGT 1 cut(s) 1962
HpyF10VI GCNNNNNNNGC 5 cut(s) 1099, 1148, 1877, 3076, 3137
HpySE526I ACGT 1 cut(s) 1962
Hsp92I GRCGYC 1 cut(s) 1064
HspAI GCGC 1 cut(s) 2364
KflI GGGWCCC 1 cut(s) 1742
Kpn2I TCCGGA 1 cut(s) 2673
Ksp22I TGATCA 3 cut(s) 3, 685, 1572
LmnI GCTCC 6 cut(s) 238, 246, 610, 1842, 2151, 2899
Lsp1109I GCAGC 8 cut(s) 1114, 1217, 1228, 1468, 1513, 1846, 2093, 2188
LweI GCATC 6 cut(s) 26, 989, 1413, 1943, 2538, 3045
MabI ACCWGGT 1 cut(s) 2796
MaeI CTAG 9 cut(s) 501, 864, 1401, 1946, 2015, 2240, 2312, 2636, 3171
MaeII ACGT 1 cut(s) 1962
MaeIII GTNAC 7 cut(s) 127, 402, 1042, 2356, 2487, 2535, 2792
MflI RGATCY 6 cut(s) 283, 1214, 1651, 1980, 1999, 2666
MhlI GDGCHC 4 cut(s) 243, 388, 1554, 2896
MlyI GAGTC 5 cut(s) 1327, 1494, 1792, 2224, 2856
MmeI TCCRAC 3 cut(s) 1543, 1912, 1930
MroI TCCGGA 1 cut(s) 2673
MroXI GAANNNNTTC 2 cut(s) 1478, 2187
MseI TTAA 9 cut(s) 252, 764, 1059, 1080, 1089, 1224, 2258, 2463, 2498
MslI CAYNNNNRTG 5 cut(s) 428, 634, 983, 2062, 2877
MspA1I CMGCKG 3 cut(s) 1163, 1526, 2179
MspI CCGG 5 cut(s) 1218, 1872, 2010, 2658, 2674
MspR9I CCNGG 6 cut(s) 1132, 1219, 2011, 2698, 2718, 2798
Mva1269I GAATGC 3 cut(s) 1380, 2346, 3131
MvaI CCWGG 4 cut(s) 1132, 2698, 2718, 2798
MwoI GCNNNNNNNGC 5 cut(s) 1099, 1148, 1877, 3076, 3137
NciI CCSGG 2 cut(s) 1219, 2011
NcoI CCATGG 1 cut(s) 629
NdeI CATATG 1 cut(s) 2416
NheI GCTAGC 1 cut(s) 500
NlaIV GGNNCC 7 cut(s) 285, 612, 1009, 1743, 1744, 1780, 3094
NmeAIII GCCGAG 1 cut(s) 2944
NmuCI GTSAC 4 cut(s) 127, 402, 1042, 2356
NspI RCATGY 5 cut(s) 171, 873, 1102, 1931, 2308
NspV TTCGAA 1 cut(s) 3135
OliI CACNNNNGTG 1 cut(s) 983
PagI TCATGA 1 cut(s) 6
PceI AGGCCT 1 cut(s) 1914
PciI ACATGT 2 cut(s) 1927, 2304
PcsI WCGNNNNNNNCGW 1 cut(s) 388
PctI GAATGC 3 cut(s) 1380, 2346, 3131
PdmI GAANNNNTTC 2 cut(s) 1478, 2187
PflFI GACNNNGTC 2 cut(s) 2505, 2933
PflMI CCANNNNNTGG 2 cut(s) 1775, 1931
PkrI GCNGC 8 cut(s) 1129, 1207, 1243, 1458, 1528, 1836, 2083, 2178
PleI GAGTC 5 cut(s) 1326, 1493, 1792, 2224, 2856
PpsI GAGTC 5 cut(s) 1326, 1493, 1792, 2224, 2856
PpuMI RGGWCCY 1 cut(s) 1742
PscI ACATGT 2 cut(s) 1927, 2304
PsiI TTATAA 1 cut(s) 2594
Psp124BI GAGCTC 2 cut(s) 243, 2896
Psp5II RGGWCCY 1 cut(s) 1742
Psp6I CCWGG 4 cut(s) 1130, 2696, 2716, 2796
PspEI GGTNACC 1 cut(s) 2792
PspGI CCWGG 4 cut(s) 1130, 2696, 2716, 2796
PspN4I GGNNCC 7 cut(s) 285, 612, 1009, 1743, 1744, 1780, 3094
PspPI GGNCC 5 cut(s) 967, 1034, 1742, 2655, 2714
PspPPI RGGWCCY 1 cut(s) 1742
PsrI GAACNNNNNNTAC 2 cut(s) 3003, 3035
PstI CTGCAG 1 cut(s) 1207
PstNI CAGNNNCTG 2 cut(s) 1529, 2366
PsuI RGATCY 6 cut(s) 283, 1214, 1651, 1980, 1999, 2666
PsyI GACNNNGTC 2 cut(s) 2505, 2933
PvuII CAGCTG 2 cut(s) 1163, 1526
RsaI GTAC 8 cut(s) 592, 788, 1350, 1420, 1508, 2137, 2168, 2571
RsaNI GTAC 8 cut(s) 591, 787, 1349, 1419, 1507, 2136, 2167, 2570
RseI CAYNNNNRTG 5 cut(s) 428, 634, 983, 2062, 2877
SacI GAGCTC 2 cut(s) 243, 2896
SaqAI TTAA 9 cut(s) 252, 764, 1059, 1080, 1089, 1224, 2258, 2463, 2498
SatI GCNGC 8 cut(s) 1128, 1206, 1242, 1457, 1527, 1835, 2082, 2177
Sau96I GGNCC 5 cut(s) 967, 1034, 1742, 2655, 2714
ScaI AGTACT 1 cut(s) 788
SchI GAGTC 5 cut(s) 1327, 1494, 1792, 2224, 2856
ScrFI CCNGG 6 cut(s) 1132, 1219, 2011, 2698, 2718, 2798
SduI GDGCHC 4 cut(s) 243, 388, 1554, 2896
SexAI ACCWGGT 1 cut(s) 2796
SfaNI GCATC 6 cut(s) 26, 989, 1413, 1943, 2538, 3045
SfcI CTRYAG 5 cut(s) 441, 828, 1203, 1882, 2094
SfuI TTCGAA 1 cut(s) 3135
SinI GGWCC 5 cut(s) 967, 1034, 1742, 2655, 2714
SmiMI CAYNNNNRTG 5 cut(s) 428, 634, 983, 2062, 2877
SmlI CTYRAG 2 cut(s) 678, 2738
SmoI CTYRAG 2 cut(s) 678, 2738
SseBI AGGCCT 1 cut(s) 1914
SsiI CCGC 3 cut(s) 2179, 2552, 2584
SspMI CTAG 9 cut(s) 501, 864, 1401, 1946, 2015, 2240, 2312, 2636, 3171
SstI GAGCTC 2 cut(s) 243, 2896
StuI AGGCCT 1 cut(s) 1914
StyD4I CCNGG 6 cut(s) 1130, 1217, 2009, 2696, 2716, 2796
StyI CCWWGG 4 cut(s) 529, 629, 1294, 3126
TaiI ACGT 1 cut(s) 1965
TaqI TCGA 5 cut(s) 347, 391, 1966, 2062, 3135
TatI WGTACW 5 cut(s) 590, 786, 1506, 2135, 2166
Tru1I TTAA 9 cut(s) 252, 764, 1059, 1080, 1089, 1224, 2258, 2463, 2498
Tru9I TTAA 9 cut(s) 252, 764, 1059, 1080, 1089, 1224, 2258, 2463, 2498
TscAI CASTG 6 cut(s) 985, 1273, 1564, 1743, 1831, 2859
TseFI GTSAC 4 cut(s) 127, 402, 1042, 2356
TseI GCWGC 8 cut(s) 1127, 1205, 1241, 1456, 1526, 1834, 2081, 2176
Tsp45I GTSAC 4 cut(s) 127, 402, 1042, 2356
TspGWI ACGGA 3 cut(s) 333, 1086, 2886
TspRI CASTG 6 cut(s) 985, 1273, 1564, 1743, 1831, 2859
Tth111I GACNNNGTC 2 cut(s) 2505, 2933
Van91I CCANNNNNTGG 2 cut(s) 1775, 1931
VpaK11BI GGWCC 5 cut(s) 967, 1034, 1742, 2655, 2714
XapI RAATTY 4 cut(s) 839, 1251, 2253, 2831
XbaI TCTAGA 1 cut(s) 863
XceI RCATGY 5 cut(s) 171, 873, 1102, 1931, 2308
XmiI GTMKAC 1 cut(s) 1713
XmnI GAANNNNTTC 2 cut(s) 1478, 2187
XspI CTAG 9 cut(s) 501, 864, 1401, 1946, 2015, 2240, 2312, 2636, 3171
ZrmI AGTACT 1 cut(s) 788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.