RLG00000019625

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0009628
Physical Location & Seq
Forward (+)
54429722 .. 54432922
3201 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019625

Sequence Viewer

Length: 3201 bp
ATGAAGGTTGCATCTTTTGTTGTTGTTTGGATTGTGTATGGGTTGTTGGGTTTGGGGTTCACATATTCATACCCGACTTCAGCATTTGATGATCTCAGAAATGAAAGAAGTGAAACCACCGTCACTTATAGCTATGATAGAATGGATGAAGTGAAGAAAGCATGTGGGTTTGTTCTATCTTCTGCTTCAGAACTTAAAGCTGAAGATGAGAGAGTATATACTATGAAGAAGGAGCTCTTTTTTGTTAATGGGGATTGGAGGCAGGAGGTGGGTAAGGATCCAATCATGCCATTTGATGATAGAGAAGTTCAGAGTGAGTTTTTGGGTAATAGAACTCCGTCGAACTTGGCATCGTTTTGGCTTATGGATATTGATCGTGCTCATCGATCCAAGAAGTCACTAAGTGTTAGTGGATTCATGGTTATGGGTATTACTAGAGATGGTAGCTTTATGGATTATGGTTATCAAGGGAATCCCGAGTTCCAAATGTGGCCTAGCCATTCTCAAATTACAATTTCCTTCCAAGGGATTTACACTGAAACCAAGAAGAATGGTGGCGAAAGAGTGATGTGCTTGTTGGGGAGTACGATGTTGCCGTCTCGGGAGCCTGATTCTGCTAATCCATGGGAGTGGCTGAAGGCTTCTGATTCAAGTAATCAACCTCCTCTTTCTCAAGATGATCAGATTCTACTTGTTCTTCACTTTCCGATGACTTTCAATTTGACAAATAGGGCTATCCGAGGGGAAATGAGAAGTTTAAATCCAAAGTCAAACTCAAAGTACTTTGATGAGGTTCACATTTTATCACAGTTGGGGAAGTCTGCAGTGTATAAATTTGGATCAGAAAAGATTGTTTCTAGAGCATGTGATCCATACCCTTCTAATGATAGCTTGGTATATGGTGGCATTAGCAACTACAAAGGTCATGCTATTTGCGAAATCCTTGAGGAAGTTGCACGGGACCAAGCTTTCACTGTTGTACCGAACTGGAGATGCAATGGCACCGATGAGTTTTGCAGTAAGTTAGGTCCATTTGTGACAGATATAGAGATTAAGGCAGCAGGCGGAAGCTTTAAAGGTGTGAAGCTTTACATGCAGGAAATCAGGTGTGAACAAAAAGCTGCCAAGGGAAATGCCAGTTCTGCAAGGGTATCAGCTGTATTTAGAGCTGTTTCTCCGATGGAGAATCTATATACTGCAGCAAAGAGATCCGGGCTTAACAAAATGACTGTTGCTGCTGAGGGAATTTGGAAATCTACCGGTGGACAGCTTTGCATGGTTGGTTGCCTTGGAATTGTTGATGTTGTAGGGAGTCAATGCAGTACTCGGATATGTATGTATGTACCTACCTCTTTCTCCATAAAGCAACGAAGCATTCTTTATGGAAGTTTCTCTAGCATCAATGATAGTGGTACATCATATTTTCCTCTCTCCTTTGAAAAGTTAGTGCAGCCTTCGGAACTGTGGAATTATTTCAGAGTCTCCAGTCCAAACTACAAGTACACAAAAATCTATTCAGCTGCTGTTGTCTTAGAAAAAAACGAGCCCTTCAGTGTTGGAACTGTGATCAAGAAATCTTTTCTGAGTTTTCCCAAACTGGAAGATGCAGAAGCTTTTGAACTCAGTCTTTCTGTTCTCTCTGAAGATCTAACCCTTCATGTGTCTGCATTTCCCGATCCAATTCCGAAGCCTCAGCCTCCAAGTGTAGACCTTCAGATGGAGATTATCTCAGTGGGTCCCTTGTTTGGACGCTATTGGTCTCCACAAAATGGTTCCATAGCACAAGAGGAGACTCCTTACCACACAAAGTCTGAATACACTGAAAAGCAGCTCCTTCTAAATGTATCAGCACAACTCAACATCGCCGGAAACGCCTATAGCAATCTTTCTGTGCTATATTTGGAAGGCCTTTATGATCCACATGTTGGAAAGATGTATCTAGTTGGATGCAGGGATGTTCGAGCCTCGTGGAAGATCTTGTATGAGAGCATGGATCTTGAAGCCGGGCTAGATTGTTTGGTTGAGGTGGTTGTGGCTTATCCTCCCACTACATCTCGATGGTTAGTCAATCCAGCAGCCCATATTTCTGTAGCCAGCCAAAGGACTGAAGATGATCCTCTTTACTTCAGTACAGTCAAGCTCCAAACTCTTCCAATTATGTACAGGAAGCAGCGGGAAGACATTCTCTCTCGTCGGGGGATTGAGGGAATCCTCCGAGTTTTGACTCTTTCACTAGCAATATGTGGAATTTTAAGCCAACTGTTTTACATCAGGTATAATGTGGATTCTGTTCCTTACATGTCTCTAGTCATGCTCGGTATTCAAGCTATTGGGTATAGCATTCCTCTGGTCACAGGCGCCGAAGCACTCTTCAAGAAGTTAGCTTCTGAATCCTATGAAACATCAACATATGACCTTGATAACAGTCGGTGGTTTCATATACTTGATTACACAGTTAAGCTTCTTCTGATGGCCTCATTGTTACTGACTTTAAGACTTTGTCAGAAAGTGTGGAAATCTCGCATCAGGTTACTTGCACAAACTCCTCTTGAACCACATCGTGTACCTAATGATAAGCGGGTGCTTATAACCACCTCAGCAATACATTTGATTGGCTATGTAATGGTTCTAGTCATTCATAGTATGAGGACTGGCCAAAGATCCATCCGGACAAAAAGCTATAAAATTGCCAGGGAAGAATCTCATGGACTGTGGGAATGGGAAACTGAACTTGAGGAGTATGTGGGACTTGTCCAAGATTTTTTCCTACTCCCCCAGATGATTGCTAACCTGGTGTGGCAGATTGATTGTAAACCACTCAGAAAGTTTTATTTCGTTGGGATCACACTGGTCAGACTCTTTCCCCACATTTATGATTATGTTAGAGCTCCGTCTCTCAACCCTTACTTTGCCGAGGAGTATGAGTTTGTCAACCCAAGTTCGGACTTTTACTCCAAGTTTGGGGATATCGCCATACCTATTACCGCAATTCTTCTTGCAGTTGTAGTCTATGTTCAGCAGAGGTGGAATTATGAGAGGCTGAGCAAGATGCTTACTTTCGGGCAATGTAGGCTTCTTCCTTTGGGTTCCAGAATGTATGAGAGGTTGCCTTCCAGTTCCAAGGCATTCGAAACTGAGCTTGTTTCTGGTGTCAATGGTAATGCTGGACAAGAGAACAAAGAGAGTGATGATGTAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2921

Protein Analysis

1067

Amino Acids

120.48

Weight (kDa)

6.29

Isoelectric Point (pI)

42.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 51 - 266 4.4e-35 DUF2921 lipocalin-like domain
DUF2921_N PF25333 285 - 475 7.2e-40 DUF2921 lipocalin-like domain
DUF2921_N PF25333 515 - 712 5e-34 DUF2921 lipocalin-like domain
DUF2921 PF11145 724 - 1011 8.9e-60 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2588
AccB1I GGYRCC 2 cut(s) 1001, 2357
AccB7I CCANNNNNTGG 2 cut(s) 1769, 1925
AccI GTMKAC 1 cut(s) 1707
AccIII TCCGGA 1 cut(s) 2667
AciI CCGC 4 cut(s) 1065, 2173, 2578, 2985
AcoI YGGCCR 1 cut(s) 2653
AcsI RAATTY 3 cut(s) 833, 1245, 2247
AcuI CTGAAG 9 cut(s) 63, 171, 222, 656, 1534, 1662, 1697, 2110, 2127
AcyI GRCGYC 1 cut(s) 2358
AdeI CACNNNGTG 2 cut(s) 404, 2561
AfiI CCNNNNNNNGG 8 cut(s) 525, 1717, 1745, 1769, 1925, 2100, 2941, 2961
AflIII ACRYGT 2 cut(s) 1921, 2298
AgeI ACCGGT 1 cut(s) 1259
AgsI TTSAA 8 cut(s) 651, 718, 1439, 1619, 2000, 2324, 2374, 2552
AjnI CCWGG 2 cut(s) 2690, 2790
Alw21I GWGCWC 3 cut(s) 237, 382, 2890
Alw26I GTCTC 6 cut(s) 603, 1486, 1764, 1784, 2307, 2898
AlwNI CAGNNNCTG 1 cut(s) 1523
Ama87I CYCGRG 2 cut(s) 476, 600
Aor13HI TCCGGA 1 cut(s) 2667
AoxI GGCC 4 cut(s) 491, 1906, 2472, 2653
ApeKI GCWGC 9 cut(s) 1058, 1121, 1199, 1235, 1450, 1520, 1828, 2075, 2170
ApoI RAATTY 3 cut(s) 833, 1245, 2247
ArsI GACNNNNNNTTYG 2 cut(s) 703, 735
AsiGI ACCGGT 1 cut(s) 1259
Asp700I GAANNNNTTC 2 cut(s) 1472, 2181
AspLEI GCGC 1 cut(s) 2360
AspS9I GGNCC 3 cut(s) 961, 1028, 1736
AsuC2I CCSGG 2 cut(s) 1213, 2005
AsuII TTCGAA 1 cut(s) 3129
AvaI CYCGRG 2 cut(s) 476, 600
AvaII GGWCC 3 cut(s) 961, 1028, 1736
BaeI ACNNNNGTAYC 2 cut(s) 963, 996
BalI TGGCCA 1 cut(s) 2655
BamHI GGATCC 1 cut(s) 277
BanI GGYRCC 2 cut(s) 1001, 2357
BanII GRGCYC 3 cut(s) 237, 1548, 2890
BauI CACGAG 1 cut(s) 1966
BbsI GAAGAC 1 cut(s) 2184
Bbv12I GWGCWC 3 cut(s) 237, 382, 2890
BbvCI CCTCAGC 3 cut(s) 1239, 1692, 2596
BbvI GCAGC 9 cut(s) 1070, 1108, 1211, 1222, 1462, 1507, 1840, 2087, 2182
BccI CCATC 6 cut(s) 434, 1174, 1711, 2052, 2464, 2672
BceAI ACGGC 1 cut(s) 580
BciT130I CCWGG 2 cut(s) 2692, 2792
BclI TGATCA 2 cut(s) 679, 1566
BcnI CCSGG 2 cut(s) 1213, 2005
BcoDI GTCTC 6 cut(s) 603, 1486, 1764, 1784, 2307, 2898
BfaI CTAG 9 cut(s) 435, 495, 858, 1395, 1940, 2009, 2234, 2306, 2630
BfmI CTRYAG 4 cut(s) 822, 1197, 1876, 2088
BfoI RGCGCY 1 cut(s) 2361
BglII AGATCT 2 cut(s) 1645, 1974
BisI GCNGC 9 cut(s) 1059, 1122, 1200, 1236, 1451, 1521, 1829, 2076, 2171
BlpI GCTNAGC 1 cut(s) 3041
BlsI GCNGC 9 cut(s) 1060, 1123, 1201, 1237, 1452, 1522, 1830, 2077, 2172
BmcAI AGTACT 2 cut(s) 782, 1324
Bme1390I CCNGG 4 cut(s) 1213, 2005, 2692, 2792
Bme18I GGWCC 3 cut(s) 961, 1028, 1736
BmeT110I CYCGRG 2 cut(s) 476, 600
BmgT120I GGNCC 3 cut(s) 961, 1028, 1736
BmiI GGNNCC 9 cut(s) 279, 606, 962, 1003, 1737, 1738, 1774, 2359, 3088
BmrFI CCNGG 4 cut(s) 1213, 2005, 2692, 2792
BmsI GCATC 8 cut(s) 20, 359, 983, 1407, 1594, 1937, 2532, 3039
BpiI GAAGAC 1 cut(s) 2184
BplI GAGNNNNNCTC 2 cut(s) 1712, 1744
BpmI CTGGAG 2 cut(s) 1009, 1468
Bpu10I CCTNAGC 3 cut(s) 1239, 1692, 2596
Bpu1102I GCTNAGC 1 cut(s) 3041
Bpu14I TTCGAA 1 cut(s) 3129
BpuEI CTTGAG 3 cut(s) 657, 965, 2753
BpuMI CCSGG 2 cut(s) 1213, 2005
Bsa29I ATCGAT 1 cut(s) 385
BsaBI GATNNNNATC 1 cut(s) 372
BsaHI GRCGYC 1 cut(s) 2358
BsaI GGTCTC 1 cut(s) 1764
BsaJI CCNNGG 8 cut(s) 523, 623, 739, 1125, 1288, 2691, 2913, 3120
BsaWI WCCGGW 2 cut(s) 1259, 2667
BsaXI ACNNNNNCTCC 4 cut(s) 2909, 2936, 2939, 2966
Bsc4I CCNNNNNNNGG 8 cut(s) 525, 1717, 1745, 1769, 1925, 2100, 2941, 2961
Bse118I RCCGGY 1 cut(s) 1259
Bse1I ACTGG 7 cut(s) 992, 1137, 1485, 1602, 2656, 2853, 3114
Bse3DI GCAATG 2 cut(s) 1003, 3071
Bse8I GATNNNNATC 1 cut(s) 372
BseAI TCCGGA 1 cut(s) 2667
BseBI CCWGG 2 cut(s) 2692, 2792
BseCI ATCGAT 1 cut(s) 385
BseDI CCNNGG 8 cut(s) 523, 623, 739, 1125, 1288, 2691, 2913, 3120
BseGI GGATG 4 cut(s) 151, 1952, 1960, 2664
BseJI GATNNNNATC 1 cut(s) 372
BseLI CCNNNNNNNGG 8 cut(s) 525, 1717, 1745, 1769, 1925, 2100, 2941, 2961
BseMI GCAATG 2 cut(s) 1003, 3071
BseNI ACTGG 7 cut(s) 992, 1137, 1485, 1602, 2656, 2853, 3114
BseRI GAGGAG 5 cut(s) 654, 1802, 2535, 2750, 2930
BseXI GCAGC 9 cut(s) 1070, 1108, 1211, 1222, 1462, 1507, 1840, 2087, 2182
BsgI GTGCAG 1 cut(s) 1469
BshFI GGCC 4 cut(s) 493, 1908, 2474, 2655
BshNI GGYRCC 2 cut(s) 1001, 2357
BshTI ACCGGT 1 cut(s) 1259
BshVI ATCGAT 1 cut(s) 385
BsiHKAI GWGCWC 3 cut(s) 237, 382, 2890
BsiHKCI CYCGRG 2 cut(s) 476, 600
BsiSI CCGG 5 cut(s) 1212, 1260, 1866, 2004, 2668
BslFI GGGAC 3 cut(s) 974, 1722, 2760
BslI CCNNNNNNNGG 8 cut(s) 525, 1717, 1745, 1769, 1925, 2100, 2941, 2961
BsmAI GTCTC 6 cut(s) 603, 1486, 1764, 1784, 2307, 2898
BsmBI CGTCTC 2 cut(s) 603, 2898
BsmFI GGGAC 3 cut(s) 974, 1722, 2760
BsmI GAATGC 3 cut(s) 1374, 2340, 3125
BsnI GGCC 4 cut(s) 493, 1908, 2474, 2655
Bso31I GGTCTC 1 cut(s) 1764
BsoBI CYCGRG 2 cut(s) 476, 600
Bsp119I TTCGAA 1 cut(s) 3129
Bsp1286I GDGCHC 4 cut(s) 237, 382, 1548, 2890
Bsp13I TCCGGA 1 cut(s) 2667
Bsp1407I TGTACA 1 cut(s) 2160
Bsp1720I GCTNAGC 1 cut(s) 3041
Bsp19I CCATGG 1 cut(s) 623
BspACI CCGC 4 cut(s) 1065, 2173, 2578, 2985
BspANI GGCC 4 cut(s) 493, 1908, 2474, 2655
BspDI ATCGAT 1 cut(s) 385
BspEI TCCGGA 1 cut(s) 2667
BspLI GGNNCC 9 cut(s) 279, 606, 962, 1003, 1737, 1738, 1774, 2359, 3088
BspMAI CTGCAG 2 cut(s) 826, 1201
BspT104I TTCGAA 1 cut(s) 3129
BspT107I GGYRCC 2 cut(s) 1001, 2357
BspTNI GGTCTC 1 cut(s) 1764
BsrDI GCAATG 2 cut(s) 1003, 3071
BsrFI RCCGGY 1 cut(s) 1259
BsrGI TGTACA 1 cut(s) 2160
BsrI ACTGG 7 cut(s) 992, 1137, 1485, 1602, 2656, 2853, 3114
BssAI RCCGGY 1 cut(s) 1259
BssECI CCNNGG 8 cut(s) 523, 623, 739, 1125, 1288, 2691, 2913, 3120
BssNI GRCGYC 1 cut(s) 2358
BssSI CACGAG 1 cut(s) 1966
BssT1I CCWWGG 5 cut(s) 523, 623, 1125, 1288, 3120
Bst2BI CACGAG 1 cut(s) 1966
Bst2UI CCWGG 2 cut(s) 2692, 2792
Bst6I CTCTTC 2 cut(s) 2154, 2375
BstACI GRCGYC 1 cut(s) 2358
BstAUI TGTACA 1 cut(s) 2160
BstBI TTCGAA 1 cut(s) 3129
BstC8I GCNNGC 2 cut(s) 1063, 2095
BstDSI CCRYGG 1 cut(s) 623
BstF5I GGATG 4 cut(s) 151, 1952, 1960, 2664
BstH2I RGCGCY 1 cut(s) 2361
BstHHI GCGC 1 cut(s) 2360
BstMAI GTCTC 6 cut(s) 603, 1486, 1764, 1784, 2307, 2898
BstMWI GCNNNNNNNGC 4 cut(s) 1093, 1142, 1871, 3070
BstNI CCWGG 2 cut(s) 2692, 2792
BstNSI RCATGY 5 cut(s) 165, 867, 1096, 1925, 2302
BstSCI CCNGG 4 cut(s) 1211, 2003, 2690, 2790
BstSFI CTRYAG 4 cut(s) 822, 1197, 1876, 2088
BstV1I GCAGC 9 cut(s) 1070, 1108, 1211, 1222, 1462, 1507, 1840, 2087, 2182
BstV2I GAAGAC 1 cut(s) 2184
BstX2I RGATCY 6 cut(s) 277, 1208, 1645, 1974, 1993, 2660
BstXI CCANNNNNNTGG 1 cut(s) 630
BstYI RGATCY 6 cut(s) 277, 1208, 1645, 1974, 1993, 2660
Bsu15I ATCGAT 1 cut(s) 385
BsuRI GGCC 4 cut(s) 493, 1908, 2474, 2655
BsuTUI ATCGAT 1 cut(s) 385
BtgI CCRYGG 1 cut(s) 623
BtgZI GCGATG 1 cut(s) 1846
BtsCI GGATG 4 cut(s) 151, 1952, 1960, 2664
BtsI GCAGTG 1 cut(s) 831
BtsIMutI CAGTG 7 cut(s) 534, 831, 972, 1558, 1737, 1818, 2846
Cac8I GCNNGC 2 cut(s) 1063, 2095
CaiI CAGNNNCTG 1 cut(s) 1523
CfoI GCGC 1 cut(s) 2360
Cfr10I RCCGGY 1 cut(s) 1259
Cfr13I GGNCC 3 cut(s) 961, 1028, 1736
ClaI ATCGAT 1 cut(s) 385
CseI GACGC 1 cut(s) 1758
CsiI ACCWGGT 1 cut(s) 2790
CspAI ACCGGT 1 cut(s) 1259
CspCI CAANNNNNGTGG 2 cut(s) 1390, 1425
DinI GGCGCC 1 cut(s) 2359
DraI TTTAAA 2 cut(s) 759, 1075
DraIII CACNNNGTG 2 cut(s) 404, 2561
EaeI YGGCCR 1 cut(s) 2653
Eam1104I CTCTTC 2 cut(s) 2154, 2375
EarI CTCTTC 2 cut(s) 2154, 2375
EciI GGCGGA 1 cut(s) 1080
Ecl136II GAGCTC 2 cut(s) 235, 2888
Eco130I CCWWGG 5 cut(s) 523, 623, 1125, 1288, 3120
Eco147I AGGCCT 1 cut(s) 1908
Eco24I GRGCYC 3 cut(s) 237, 1548, 2890
Eco31I GGTCTC 1 cut(s) 1764
Eco32I GATATC 1 cut(s) 2968
Eco47I GGWCC 3 cut(s) 961, 1028, 1736
Eco53kI GAGCTC 2 cut(s) 235, 2888
Eco57I CTGAAG 9 cut(s) 63, 171, 222, 656, 1534, 1662, 1697, 2110, 2127
Eco88I CYCGRG 2 cut(s) 476, 600
EcoICRI GAGCTC 2 cut(s) 235, 2888
EcoO109I RGGNCCY 1 cut(s) 1736
EcoRII CCWGG 2 cut(s) 2690, 2790
EcoRV GATATC 1 cut(s) 2968
EcoT14I CCWWGG 5 cut(s) 523, 623, 1125, 1288, 3120
EcoT38I GRGCYC 3 cut(s) 237, 1548, 2890
EgeI GGCGCC 1 cut(s) 2359
EheI GGCGCC 1 cut(s) 2359
ErhI CCWWGG 5 cut(s) 523, 623, 1125, 1288, 3120
Esp3I CGTCTC 2 cut(s) 603, 2898
FalI AAGNNNNNCTT 2 cut(s) 221, 253
FaqI GGGAC 3 cut(s) 974, 1722, 2760
FauI CCCGC 2 cut(s) 2166, 2571
FauNDI CATATG 1 cut(s) 2410
FbaI TGATCA 2 cut(s) 679, 1566
FblI GTMKAC 1 cut(s) 1707
Fnu4HI GCNGC 9 cut(s) 1059, 1122, 1200, 1236, 1451, 1521, 1829, 2076, 2171
FokI GGATG 4 cut(s) 158, 1959, 1967, 2651
FriOI GRGCYC 3 cut(s) 237, 1548, 2890
Fsp4HI GCNGC 9 cut(s) 1059, 1122, 1200, 1236, 1451, 1521, 1829, 2076, 2171
FspBI CTAG 9 cut(s) 435, 495, 858, 1395, 1940, 2009, 2234, 2306, 2630
GlaI GCGC 1 cut(s) 2359
GluI GCNGC 9 cut(s) 1059, 1122, 1200, 1236, 1451, 1521, 1829, 2076, 2171
GsuI CTGGAG 2 cut(s) 1009, 1468
HaeII RGCGCY 1 cut(s) 2361
HaeIII GGCC 4 cut(s) 493, 1908, 2474, 2655
HapII CCGG 5 cut(s) 1212, 1260, 1866, 2004, 2668
HgaI GACGC 1 cut(s) 1758
HhaI GCGC 1 cut(s) 2360
Hin1I GRCGYC 1 cut(s) 2358
Hin6I GCGC 1 cut(s) 2358
HinP1I GCGC 1 cut(s) 2358
HincII GTYRAC 1 cut(s) 2932
HindII GTYRAC 1 cut(s) 2932
HindIII AAGCTT 5 cut(s) 966, 1069, 1085, 1611, 2459
HpaII CCGG 5 cut(s) 1212, 1260, 1866, 2004, 2668
Hpy166II GTNNAC 9 cut(s) 60, 796, 1112, 1265, 1503, 1708, 2564, 2813, 2932
Hpy8I GTNNAC 9 cut(s) 60, 796, 1112, 1265, 1503, 1708, 2564, 2813, 2932
Hpy99I CGWCG 2 cut(s) 343, 2196
HpyF10VI GCNNNNNNNGC 4 cut(s) 1093, 1142, 1871, 3070
Hsp92I GRCGYC 1 cut(s) 2358
HspAI GCGC 1 cut(s) 2358
KasI GGCGCC 1 cut(s) 2357
KflI GGGWCCC 1 cut(s) 1736
Kpn2I TCCGGA 1 cut(s) 2667
Ksp22I TGATCA 2 cut(s) 679, 1566
LmnI GCTCC 5 cut(s) 232, 604, 1836, 2145, 2893
Lsp1109I GCAGC 9 cut(s) 1070, 1108, 1211, 1222, 1462, 1507, 1840, 2087, 2182
LweI GCATC 8 cut(s) 20, 359, 983, 1407, 1594, 1937, 2532, 3039
MabI ACCWGGT 1 cut(s) 2790
MaeI CTAG 9 cut(s) 435, 495, 858, 1395, 1940, 2009, 2234, 2306, 2630
MaeIII GTNAC 6 cut(s) 121, 396, 1036, 2350, 2481, 2529
MflI RGATCY 6 cut(s) 277, 1208, 1645, 1974, 1993, 2660
MhlI GDGCHC 4 cut(s) 237, 382, 1548, 2890
MlsI TGGCCA 1 cut(s) 2655
MluNI TGGCCA 1 cut(s) 2655
Mly113I GGCGCC 1 cut(s) 2358
MlyI GAGTC 5 cut(s) 1321, 1488, 1786, 2218, 2850
MmeI TCCRAC 3 cut(s) 1537, 1906, 1924
Mox20I TGGCCA 1 cut(s) 2655
MroI TCCGGA 1 cut(s) 2667
MroXI GAANNNNTTC 2 cut(s) 1472, 2181
MscI TGGCCA 1 cut(s) 2655
MseI TTAA 9 cut(s) 195, 246, 758, 1053, 1074, 1218, 2252, 2457, 2492
MslI CAYNNNNRTG 4 cut(s) 422, 628, 2056, 2871
Msp20I TGGCCA 1 cut(s) 2655
MspA1I CMGCKG 3 cut(s) 1157, 1520, 2173
MspI CCGG 5 cut(s) 1212, 1260, 1866, 2004, 2668
MspR9I CCNGG 4 cut(s) 1213, 2005, 2692, 2792
Mva1269I GAATGC 3 cut(s) 1374, 2340, 3125
MvaI CCWGG 2 cut(s) 2692, 2792
MwoI GCNNNNNNNGC 4 cut(s) 1093, 1142, 1871, 3070
NarI GGCGCC 1 cut(s) 2358
NciI CCSGG 2 cut(s) 1213, 2005
NcoI CCATGG 1 cut(s) 623
NdeI CATATG 1 cut(s) 2410
NlaIV GGNNCC 9 cut(s) 279, 606, 962, 1003, 1737, 1738, 1774, 2359, 3088
NmeAIII GCCGAG 1 cut(s) 2938
NmuCI GTSAC 4 cut(s) 121, 396, 1036, 2350
NspI RCATGY 5 cut(s) 165, 867, 1096, 1925, 2302
NspV TTCGAA 1 cut(s) 3129
PceI AGGCCT 1 cut(s) 1908
PciI ACATGT 2 cut(s) 1921, 2298
PcsI WCGNNNNNNNCGW 2 cut(s) 382, 593
PctI GAATGC 3 cut(s) 1374, 2340, 3125
PdmI GAANNNNTTC 2 cut(s) 1472, 2181
PflFI GACNNNGTC 1 cut(s) 2499
PflMI CCANNNNNTGG 2 cut(s) 1769, 1925
PinAI ACCGGT 1 cut(s) 1259
PkrI GCNGC 9 cut(s) 1060, 1123, 1201, 1237, 1452, 1522, 1830, 2077, 2172
PleI GAGTC 5 cut(s) 1320, 1487, 1786, 2218, 2850
PluTI GGCGCC 1 cut(s) 2361
PpsI GAGTC 5 cut(s) 1320, 1487, 1786, 2218, 2850
PpuMI RGGWCCY 1 cut(s) 1736
PscI ACATGT 2 cut(s) 1921, 2298
PsiI TTATAA 1 cut(s) 2588
Psp124BI GAGCTC 2 cut(s) 237, 2890
Psp5II RGGWCCY 1 cut(s) 1736
Psp6I CCWGG 2 cut(s) 2690, 2790
PspGI CCWGG 2 cut(s) 2690, 2790
PspN4I GGNNCC 9 cut(s) 279, 606, 962, 1003, 1737, 1738, 1774, 2359, 3088
PspPI GGNCC 3 cut(s) 961, 1028, 1736
PspPPI RGGWCCY 1 cut(s) 1736
PsrI GAACNNNNNNTAC 2 cut(s) 2997, 3029
PstI CTGCAG 2 cut(s) 826, 1201
PstNI CAGNNNCTG 1 cut(s) 1523
PsuI RGATCY 6 cut(s) 277, 1208, 1645, 1974, 1993, 2660
PsyI GACNNNGTC 1 cut(s) 2499
PvuII CAGCTG 2 cut(s) 1157, 1520
RseI CAYNNNNRTG 4 cut(s) 422, 628, 2056, 2871
SacI GAGCTC 2 cut(s) 237, 2890
SaqAI TTAA 9 cut(s) 195, 246, 758, 1053, 1074, 1218, 2252, 2457, 2492
SatI GCNGC 9 cut(s) 1059, 1122, 1200, 1236, 1451, 1521, 1829, 2076, 2171
Sau96I GGNCC 3 cut(s) 961, 1028, 1736
ScaI AGTACT 2 cut(s) 782, 1324
SchI GAGTC 5 cut(s) 1321, 1488, 1786, 2218, 2850
ScrFI CCNGG 4 cut(s) 1213, 2005, 2692, 2792
SduI GDGCHC 4 cut(s) 237, 382, 1548, 2890
SexAI ACCWGGT 1 cut(s) 2790
SfaNI GCATC 8 cut(s) 20, 359, 983, 1407, 1594, 1937, 2532, 3039
SfcI CTRYAG 4 cut(s) 822, 1197, 1876, 2088
SfoI GGCGCC 1 cut(s) 2359
SfuI TTCGAA 1 cut(s) 3129
SinI GGWCC 3 cut(s) 961, 1028, 1736
SmiMI CAYNNNNRTG 4 cut(s) 422, 628, 2056, 2871
SmlI CTYRAG 3 cut(s) 672, 944, 2732
SmoI CTYRAG 3 cut(s) 672, 944, 2732
SseBI AGGCCT 1 cut(s) 1908
SsiI CCGC 4 cut(s) 1065, 2173, 2578, 2985
SspDI GGCGCC 1 cut(s) 2357
SspMI CTAG 9 cut(s) 435, 495, 858, 1395, 1940, 2009, 2234, 2306, 2630
SstI GAGCTC 2 cut(s) 237, 2890
StuI AGGCCT 1 cut(s) 1908
StyD4I CCNGG 4 cut(s) 1211, 2003, 2690, 2790
StyI CCWWGG 5 cut(s) 523, 623, 1125, 1288, 3120
TaqI TCGA 5 cut(s) 341, 385, 1960, 2056, 3129
TatI WGTACW 5 cut(s) 780, 1322, 1500, 2129, 2160
Tru1I TTAA 9 cut(s) 195, 246, 758, 1053, 1074, 1218, 2252, 2457, 2492
Tru9I TTAA 9 cut(s) 195, 246, 758, 1053, 1074, 1218, 2252, 2457, 2492
TscAI CASTG 7 cut(s) 541, 831, 979, 1558, 1737, 1825, 2853
TseFI GTSAC 4 cut(s) 121, 396, 1036, 2350
TseI GCWGC 9 cut(s) 1058, 1121, 1199, 1235, 1450, 1520, 1828, 2075, 2170
Tsp45I GTSAC 4 cut(s) 121, 396, 1036, 2350
TspGWI ACGGA 2 cut(s) 327, 2880
TspRI CASTG 7 cut(s) 541, 831, 979, 1558, 1737, 1825, 2853
Tth111I GACNNNGTC 1 cut(s) 2499
Van91I CCANNNNNTGG 2 cut(s) 1769, 1925
VpaK11BI GGWCC 3 cut(s) 961, 1028, 1736
XapI RAATTY 3 cut(s) 833, 1245, 2247
XbaI TCTAGA 1 cut(s) 857
XceI RCATGY 5 cut(s) 165, 867, 1096, 1925, 2302
XmiI GTMKAC 1 cut(s) 1707
XmnI GAANNNNTTC 2 cut(s) 1472, 2181
XspI CTAG 9 cut(s) 435, 495, 858, 1395, 1940, 2009, 2234, 2306, 2630
ZrmI AGTACT 2 cut(s) 782, 1324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.