Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009530

Physical Location & Seq

Genomic Coordinates Reverse (-)

20585008 .. 20587723

Gene Structure 2716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G55180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGGAGCTTGAAGAACAGAAGAAGTACTTTCATGGAACACTAGAGATTACAATCTTCGATGCAACACCTTTTTCTCCTCCATTTCCTTTCAATTGTATATGTACAAAGCCAAAAGCAGCTTACGTGACCATCAAGATAAACAAGAAGAAAGTTGCTAAAACAAGCTCAGAATACGACCGTATTTGGAATCAGACTTTTCAGATCCTCTGCGCTCACCCGGTTACTGACACGACTATCACCATCACGCTCAAGACTCGATGTTCTGTTCTCGGAAGATTCCGAATCTCTGCAGAACAGATCCTGACATCTAATTCAGCAGTTATCAACGGGTTCTTCCCTCTGATTGCAGACAATGGGTCAACGAAACGTAACTTGAAGCTTAAGTGTTTGATGTGGTTCAGACCGGCTTATCTTGAACCGGGATGGTGCAGAGCGCTTGAAGAAGCGTCTTTTCAAGGTATTAGGAACGCAAGCTTCCCTCAAAGATCGAACTGCAGAGTCGTACTGTATCAAGATGCACACCACAAGGCCACATTTGATCCAAGGGTTGATGATGTTCCTTTTAATGCAAGGAATCTATGGGAAGATGTTTACAAAGCGATCGAAAGTGCTAGGCACTTGGTTTACATTGCAGGATGGGCACTAAACCCTAATCTTGTTCTTGTACGCGACAACGAAACTGAGATTCCACATGCGGTTGGAGTAACGGTTGGCGAGCTTCTGAAACGGAAATCAGAGGAAGGTGTAGCGGTGAGAGTAATGTTGTGGAACGACGAGACGTCTTTACCAATGATCAAGAACAAAGGTGTAATGAGAACAAACGTCGAAAGAGCTCTTGCTTACTTCAGAAACACAAACGTTGTTTGTAGATTGTGTCCAAGATTGCACAAAAAGCTCCCTACAGCGTTTGCACACCACCAAAAGACAATAACACTGGATACACGGGTGACAAATTCAAGCACGAAGGAGCGAGAGATCATGAGCTTCCTTGGCGGGTTTGACCTTTGCGATGGTCGATATGACACTGAGGAGCATTCACTGTTTCGTACACTCGGAACAGAAGCTGATTTTTACCAGACAAGTGTAGCTGGAGCTAAGCTAAGTAGAGGCGGACCAAGAGAGCCATGGCATGATTGCCATGTGTCCGTGGTTGGAGGAGCGGCTTGGGATGTCCTGAAGAACTTCGAACAGCGATGGACGAAACAGTGTAACCCTTCCGTGTTGGTTAACACTTCAGGGATCAGAAACTTAGTAAACCTAACCGGACCTACTGAGGAAAATAACAGGAAATGGAATGTTCAAGTTCTGAGATCGATAGATCACATATCGGCAACAGAGATGCCAAGAGGTTTGCCGGTAGAGAAGAGTGTACACGATGGCTATGTCGCAGCAATTCGAAAGGCTGAGAGGTTTATCTACATCGAGAATCAGTATTTCATGGGAAGCTGTGATCATTGGGAGAGCAAGAACGATAAAATCTGCAGCGGATGCACAAACTTGATACCTGTCGAAATAGCGTTAAAGATTGCTGCTAAGATACGTGCAAGGGAGAGATTTGCTGTGTATATAGTCATACCGATGTGGCCGGAAGGGCCACCGGAGAGTGAAACGGTTGAAGAGATACTTCATTGGACGAGAGAGACGATGTCAATGATGTATCAGATCATTGGAGAGGCGATATGGGAAGTTGGAGACAAGTCGCATCCGAGGGATTATCTAAACTTCTTCTGTCTTGCAAACAGAGAAGAGAAGAGAGATGGGGAGTTTGAAGCAGTTTCGTCGCCCCACCAGAAAACGCATTACTGGAATGCGCAGAGGAATCGGAGATTCATGGTCTATGTCCACTCCAAGCTCATGATAGTGGACGACACATACATTTTGATAGGATCAGCCAATATAAACCAGAGATCAATGGATGGTTGTCGGGACACCGAGATTGCAATAGGTTGCTACCAAACCAATACCAACAACACCAACGAAATCCAAGCTTACCGGTTATCGCTCTGGTATGAGCATACCGGTGGCAAGATCACGGCAGATGACTTATCATCGTCAGAGCCAGAGAGTCTTGAATGTGTCCGAGGGTTACGGACAATAGGAGAGCAAATGTGGGAGATTTACAGTGGAGACAAGGTCGTAGACATGCTCGGTATCCATTTGGTCGCCTATCCAATTAGTGTGACAGGAGATGGTGCAGTTGAGGAAGTCGGTGACGGTTGCTTTCCTGATACCAAGACCTTGGTGAAAGGAAAGAGGTCCAAGATGTTTCCTCCTGTTCTAACCACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005575 GO:0005623 GO:0005886 GO:0006629 GO:0006644 GO:0006793 GO:0006796 GO:0006808 GO:0006950 GO:0006970 GO:0006995 GO:0007154 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0009056 GO:0009267 GO:0009395 GO:0009605 GO:0009628 GO:0009791 GO:0009825 GO:0009987 GO:0009991 GO:0016020 GO:0016036 GO:0016042 GO:0016049 GO:0016298 GO:0016787 GO:0016788 GO:0019637 GO:0022622 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0040007 GO:0042578 GO:0042594 GO:0043562 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044464 GO:0045848 GO:0046434 GO:0048364 GO:0048518 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051301 GO:0051365 GO:0051716 GO:0065007 GO:0071496 GO:0071704 GO:0071944 GO:0099402 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

762

Amino Acids

86.77

Weight (kDa)

7.53

Isoelectric Point (pI)

38.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLDc_2	PF13091	610 - 653	2.4e-06	PLD-like domain
PLDc	PF00614	614 - 637	3.8e-07	Phospholipase D Active site motif
PLD_C	PF12357	685 - 751	3.5e-21	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55180 AT1G55180
fragaria_vesca	FvH4_6g33140
malus_domestica	MD09G1194700.v1.1 MD17G1175200.v1.1
prunus_persica	Prupe.3G051200_v2.0.a1
pyrus_communis	pycom09g11160
rosa_chinensis	RchiOBHm_Chr2g0142831
rosa_laevigata	RLG00000019989
rosa_multiflora	Rmu_co8241083.1_g000001 Rmu_co8446503.1_g000001 Rmu_sc0012306.1_g000009 Rmu_sc0013116.1_g000004
rosa_roxburghii	Rroxscaffold_2G00102280 Rroxscaffold_2G00103320
rosa_rugosa	Rorug02G0375600 Rorug02G0375700
rosa_samantha	Rh2AG428800 Rh2BG438100 Rh2CG414300 Rh2DG447900
rosa_wichuraiana	Rw2G035060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	782
Acc16I	TGCGCA	1 cut(s)	1812
AccBSI	CCGCTC	1 cut(s)	1160
AccI	GTMKAC	1 cut(s)	2139
AccII	CGCG	1 cut(s)	669
AciI	CCGC	6 cut(s)	695, 749, 993, 1110, 1160, 1485
AclI	AACGTT	1 cut(s)	858
AclWI	GGATC	5 cut(s)	196, 292, 533, 1247, 1894
AcoI	YGGCCR	1 cut(s)	1583
AcsI	RAATTY	1 cut(s)	952
AcuI	CTGAAG	3 cut(s)	829, 1196, 1218
AcyI	GRCGYC	1 cut(s)	779
AfaI	GTAC	6 cut(s)	26, 103, 504, 666, 1048, 1371
AfeI	AGCGCT	1 cut(s)	435
AflII	CTTAAG	1 cut(s)	380
AgeI	ACCGGT	2 cut(s)	1992, 2018
AhdI	GACNNNNNGTC	2 cut(s)	355, 778
Alw21I	GWGCWC	1 cut(s)	835
Alw26I	GTCTC	4 cut(s)	770, 1634, 1686, 2121
AlwI	GGATC	5 cut(s)	196, 292, 533, 1247, 1894
AlwNI	CAGNNNCTG	2 cut(s)	301, 1064
Aor51HI	AGCGCT	1 cut(s)	435
AoxI	GGCC	3 cut(s)	528, 1583, 1592
ApeKI	GCWGC	4 cut(s)	116, 1388, 1482, 1529
ApoI	RAATTY	1 cut(s)	952
AsiGI	ACCGGT	2 cut(s)	1992, 2018
Asp700I	GAANNNNTTC	1 cut(s)	1181
AspLEI	GCGC	3 cut(s)	212, 436, 1813
AspS9I	GGNCC	4 cut(s)	1112, 1265, 1592, 2256
AsuC2I	CCSGG	2 cut(s)	218, 420
AsuHPI	GGTGA	6 cut(s)	206, 229, 763, 958, 2222, 2254
AsuII	TTCGAA	2 cut(s)	1185, 1396
AvaII	GGWCC	3 cut(s)	1112, 1265, 2256
BaeGI	GKGCMC	1 cut(s)	643
BaeI	ACNNNNGTAYC	2 cut(s)	930, 963
BanII	GRGCYC	1 cut(s)	835
Bbv12I	GWGCWC	1 cut(s)	835
BbvI	GCAGC	4 cut(s)	128, 1400, 1494, 1516
BceAI	ACGGC	1 cut(s)	2049
BcgI	CGANNNNNNTGC	4 cut(s)	1761, 1795, 1802, 1836
BciVI	GTATCC	2 cut(s)	931, 2162
BclI	TGATCA	2 cut(s)	792, 1450
BcnI	CCSGG	2 cut(s)	218, 420
BcoDI	GTCTC	4 cut(s)	770, 1634, 1686, 2121
BfaI	CTAG	2 cut(s)	41, 612
BfmI	CTRYAG	4 cut(s)	288, 493, 900, 1480
BfoI	RGCGCY	1 cut(s)	437
BfrI	CTTAAG	1 cut(s)	380
BfuI	GTATCC	2 cut(s)	931, 2162
BglI	GCCNNNNNGGC	1 cut(s)	1591
BisI	GCNGC	5 cut(s)	117, 1161, 1389, 1483, 1530
BlpI	GCTNAGC	1 cut(s)	1095
BlsI	GCNGC	5 cut(s)	118, 1162, 1390, 1484, 1531
BmcAI	AGTACT	1 cut(s)	26
Bme1390I	CCNGG	2 cut(s)	218, 420
Bme18I	GGWCC	3 cut(s)	1112, 1265, 2256
BmeRI	GACNNNNNGTC	2 cut(s)	355, 778
BmgT120I	GGNCC	4 cut(s)	1112, 1265, 1592, 2256
BmrFI	CCNGG	2 cut(s)	218, 420
BmsI	GCATC	5 cut(s)	49, 505, 1329, 1478, 1711
BpmI	CTGGAG	1 cut(s)	1110
Bpu1102I	GCTNAGC	1 cut(s)	1095
Bpu14I	TTCGAA	2 cut(s)	1185, 1396
BpuEI	CTTGAG	1 cut(s)	233
BpuMI	CCSGG	2 cut(s)	218, 420
Bsa29I	ATCGAT	1 cut(s)	1313
BsaAI	YACGTR	2 cut(s)	124, 1541
BsaBI	GATNNNNATC	1 cut(s)	50
BsaHI	GRCGYC	1 cut(s)	779
BsaJI	CCNNGG	7 cut(s)	542, 988, 1124, 1146, 1706, 2080, 2238
BsaWI	WCCGGW	4 cut(s)	1262, 1597, 1992, 2018
BsaXI	ACNNNNNCTCC	4 cut(s)	693, 723, 2118, 2148
Bse118I	RCCGGY	4 cut(s)	403, 1354, 1992, 2018
Bse1I	ACTGG	2 cut(s)	939, 1808
Bse3DI	GCAATG	1 cut(s)	627
Bse8I	GATNNNNATC	1 cut(s)	50
BseCI	ATCGAT	1 cut(s)	1313
BseDI	CCNNGG	7 cut(s)	542, 988, 1124, 1146, 1706, 2080, 2238
BseGI	GGATG	6 cut(s)	428, 641, 1174, 1493, 1702, 1921
BseJI	GATNNNNATC	1 cut(s)	50
BseMI	GCAATG	1 cut(s)	627
BseMII	CTCAG	6 cut(s)	180, 672, 1017, 1263, 1298, 1395
BseNI	ACTGG	2 cut(s)	939, 1808
BseRI	GAGGAG	3 cut(s)	66, 1043, 1170
BseSI	GKGCMC	1 cut(s)	643
BseXI	GCAGC	4 cut(s)	128, 1400, 1494, 1516
BsgI	GTGCAG	2 cut(s)	448, 2214
Bsh1236I	CGCG	1 cut(s)	669
Bsh1285I	CGRYCG	2 cut(s)	178, 603
BshFI	GGCC	3 cut(s)	530, 1585, 1594
BshTI	ACCGGT	2 cut(s)	1992, 2018
BshVI	ATCGAT	1 cut(s)	1313
BsiEI	CGRYCG	2 cut(s)	178, 603
BsiHKAI	GWGCWC	1 cut(s)	835
BsiSI	CCGG	9 cut(s)	218, 404, 419, 1263, 1355, 1586, 1598, 1993, 2019
BslFI	GGGAC	1 cut(s)	1940
BsmAI	GTCTC	4 cut(s)	770, 1634, 1686, 2121
BsmBI	CGTCTC	2 cut(s)	770, 1634
BsmFI	GGGAC	1 cut(s)	1940
BsmI	GAATGC	2 cut(s)	1033, 1813
BsnI	GGCC	3 cut(s)	530, 1585, 1594
Bsp119I	TTCGAA	2 cut(s)	1185, 1396
Bsp1286I	GDGCHC	2 cut(s)	643, 835
Bsp1407I	TGTACA	2 cut(s)	101, 1369
Bsp1720I	GCTNAGC	1 cut(s)	1095
Bsp19I	CCATGG	1 cut(s)	1124
BspACI	CCGC	6 cut(s)	695, 749, 993, 1110, 1160, 1485
BspANI	GGCC	3 cut(s)	530, 1585, 1594
BspCNI	CTCAG	6 cut(s)	179, 673, 1018, 1264, 1299, 1396
BspDI	ATCGAT	1 cut(s)	1313
BspFNI	CGCG	1 cut(s)	669
BspHI	TCATGA	2 cut(s)	978, 1854
BspMAI	CTGCAG	3 cut(s)	292, 497, 1484
BspPI	GGATC	5 cut(s)	196, 292, 533, 1247, 1894
BspT104I	TTCGAA	2 cut(s)	1185, 1396
BspTI	CTTAAG	1 cut(s)	380
BsrBI	CCGCTC	1 cut(s)	1160
BsrDI	GCAATG	1 cut(s)	627
BsrFI	RCCGGY	4 cut(s)	403, 1354, 1992, 2018
BsrGI	TGTACA	2 cut(s)	101, 1369
BsrI	ACTGG	2 cut(s)	939, 1808
BssAI	RCCGGY	4 cut(s)	403, 1354, 1992, 2018
BssECI	CCNNGG	7 cut(s)	542, 988, 1124, 1146, 1706, 2080, 2238
BssNI	GRCGYC	1 cut(s)	779
BssT1I	CCWWGG	4 cut(s)	542, 988, 1124, 2238
Bst4CI	ACNGT	8 cut(s)	179, 507, 709, 1041, 1206, 1612, 2123, 2216
Bst6I	CTCTTC	4 cut(s)	1358, 1611, 1740, 1745
BstACI	GRCGYC	1 cut(s)	779
BstAFI	CTTAAG	1 cut(s)	380
BstAPI	GCANNNNNTGC	1 cut(s)	1488
BstAUI	TGTACA	2 cut(s)	101, 1369
BstBAI	YACGTR	2 cut(s)	124, 1541
BstBI	TTCGAA	2 cut(s)	1185, 1396
BstC8I	GCNNGC	2 cut(s)	472, 716
BstDSI	CCRYGG	2 cut(s)	1124, 1146
BstF5I	GGATG	6 cut(s)	428, 641, 1174, 1493, 1702, 1921
BstFNI	CGCG	1 cut(s)	669
BstH2I	RGCGCY	1 cut(s)	437
BstHHI	GCGC	3 cut(s)	212, 436, 1813
BstMAI	GTCTC	4 cut(s)	770, 1634, 1686, 2121
BstMCI	CGRYCG	2 cut(s)	178, 603
BstMWI	GCNNNNNNNGC	5 cut(s)	638, 892, 990, 1488, 1591
BstNSI	RCATGY	2 cut(s)	695, 2146
BstSCI	CCNGG	2 cut(s)	216, 418
BstSFI	CTRYAG	4 cut(s)	288, 493, 900, 1480
BstSLI	GKGCMC	1 cut(s)	643
BstUI	CGCG	1 cut(s)	669
BstV1I	GCAGC	4 cut(s)	128, 1400, 1494, 1516
BstX2I	RGATCY	2 cut(s)	201, 297
BstXI	CCANNNNNNTGG	1 cut(s)	2239
BstYI	RGATCY	2 cut(s)	201, 297
Bsu15I	ATCGAT	1 cut(s)	1313
BsuI	GTATCC	2 cut(s)	931, 2162
BsuRI	GGCC	3 cut(s)	530, 1585, 1594
BsuTUI	ATCGAT	1 cut(s)	1313
BtgI	CCRYGG	2 cut(s)	1124, 1146
BtgZI	GCGATG	2 cut(s)	1023, 1207
BtsCI	GGATG	6 cut(s)	428, 641, 1174, 1493, 1702, 1921
BtsIMutI	CAGTG	5 cut(s)	932, 1023, 1037, 1211, 2128
Cac8I	GCNNGC	2 cut(s)	472, 716
CaiI	CAGNNNCTG	2 cut(s)	301, 1064
CciI	TCATGA	2 cut(s)	978, 1854
CfoI	GCGC	3 cut(s)	212, 436, 1813
Cfr10I	RCCGGY	4 cut(s)	403, 1354, 1992, 2018
Cfr13I	GGNCC	4 cut(s)	1112, 1265, 1592, 2256
ClaI	ATCGAT	1 cut(s)	1313
CseI	GACGC	1 cut(s)	435
Csp6I	GTAC	6 cut(s)	25, 102, 503, 665, 1047, 1370
CspAI	ACCGGT	2 cut(s)	1992, 2018
CviQI	GTAC	6 cut(s)	25, 102, 503, 665, 1047, 1370
DriI	GACNNNNNGTC	2 cut(s)	355, 778
EaeI	YGGCCR	1 cut(s)	1583
Eam1104I	CTCTTC	4 cut(s)	1358, 1611, 1740, 1745
Eam1105I	GACNNNNNGTC	2 cut(s)	355, 778
EarI	CTCTTC	4 cut(s)	1358, 1611, 1740, 1745
EciI	GGCGGA	1 cut(s)	1125
Ecl136II	GAGCTC	1 cut(s)	833
Eco130I	CCWWGG	4 cut(s)	542, 988, 1124, 2238
Eco24I	GRGCYC	1 cut(s)	835
Eco47I	GGWCC	3 cut(s)	1112, 1265, 2256
Eco47III	AGCGCT	1 cut(s)	435
Eco53kI	GAGCTC	1 cut(s)	833
Eco57I	CTGAAG	3 cut(s)	829, 1196, 1218
EcoICRI	GAGCTC	1 cut(s)	833
EcoT14I	CCWWGG	4 cut(s)	542, 988, 1124, 2238
EcoT38I	GRGCYC	1 cut(s)	835
ErhI	CCWWGG	4 cut(s)	542, 988, 1124, 2238
Esp3I	CGTCTC	2 cut(s)	770, 1634
FalI	AAGNNNNNCTT	4 cut(s)	11, 43, 1608, 1640
FaqI	GGGAC	1 cut(s)	1940
FauI	CCCGC	1 cut(s)	986
FbaI	TGATCA	2 cut(s)	792, 1450
FblI	GTMKAC	1 cut(s)	2139
Fnu4HI	GCNGC	5 cut(s)	117, 1161, 1389, 1483, 1530
FokI	GGATG	6 cut(s)	435, 648, 1181, 1500, 1689, 1928
FriOI	GRGCYC	1 cut(s)	835
Fsp4HI	GCNGC	5 cut(s)	117, 1161, 1389, 1483, 1530
FspBI	CTAG	2 cut(s)	41, 612
FspI	TGCGCA	1 cut(s)	1812
GlaI	GCGC	3 cut(s)	211, 435, 1812
GluI	GCNGC	5 cut(s)	117, 1161, 1389, 1483, 1530
GsuI	CTGGAG	1 cut(s)	1110
HaeII	RGCGCY	1 cut(s)	437
HaeIII	GGCC	3 cut(s)	530, 1585, 1594
HapII	CCGG	9 cut(s)	218, 404, 419, 1263, 1355, 1586, 1598, 1993, 2019
HgaI	GACGC	1 cut(s)	435
HhaI	GCGC	3 cut(s)	212, 436, 1813
Hin1I	GRCGYC	1 cut(s)	779
Hin6I	GCGC	3 cut(s)	210, 434, 1811
HinP1I	GCGC	3 cut(s)	210, 434, 1811
HincII	GTYRAC	2 cut(s)	360, 1228
HindII	GTYRAC	2 cut(s)	360, 1228
HindIII	AAGCTT	3 cut(s)	377, 472, 1986
HpaI	GTTAAC	1 cut(s)	1228
HpaII	CCGG	9 cut(s)	218, 404, 419, 1263, 1355, 1586, 1598, 1993, 2019
HphI	GGTGA	6 cut(s)	206, 229, 763, 958, 2222, 2254
Hpy99I	CGWCG	3 cut(s)	776, 827, 1783
HpyAV	CCTTC	4 cut(s)	734, 958, 1224, 1583
HpyCH4III	ACNGT	8 cut(s)	179, 507, 709, 1041, 1206, 1612, 2123, 2216
HpyCH4IV	ACGT	6 cut(s)	123, 367, 779, 822, 858, 1540
HpyF10VI	GCNNNNNNNGC	5 cut(s)	638, 892, 990, 1488, 1591
HpySE526I	ACGT	6 cut(s)	123, 367, 779, 822, 858, 1540
Hsp92I	GRCGYC	1 cut(s)	779
HspAI	GCGC	3 cut(s)	210, 434, 1811
Ksp22I	TGATCA	2 cut(s)	792, 1450
KspAI	GTTAAC	1 cut(s)	1228
LmnI	GCTCC	6 cut(s)	4, 900, 967, 1030, 1091, 1157
Lsp1109I	GCAGC	4 cut(s)	128, 1400, 1494, 1516
LweI	GCATC	5 cut(s)	49, 505, 1329, 1478, 1711
MaeI	CTAG	2 cut(s)	41, 612
MaeII	ACGT	6 cut(s)	123, 367, 779, 822, 858, 1540
MaeIII	GTNAC	9 cut(s)	124, 220, 368, 703, 946, 1208, 2085, 2179, 2210
MbiI	CCGCTC	1 cut(s)	1160
MfeI	CAATTG	1 cut(s)	91
MflI	RGATCY	2 cut(s)	201, 297
MhlI	GDGCHC	2 cut(s)	643, 835
MluCI	AATT	5 cut(s)	91, 310, 952, 1392, 2172
MlyI	GAGTC	3 cut(s)	247, 507, 2074
MmeI	TCCRAC	3 cut(s)	679, 1132, 1669
MroXI	GAANNNNTTC	1 cut(s)	1181
MseI	TTAA	4 cut(s)	381, 564, 1227, 1520
MslI	CAYNNNNRTG	3 cut(s)	1577, 1859, 2019
MspA1I	CMGCKG	1 cut(s)	1485
MspCI	CTTAAG	1 cut(s)	380
MspI	CCGG	9 cut(s)	218, 404, 419, 1263, 1355, 1586, 1598, 1993, 2019
MspR9I	CCNGG	2 cut(s)	218, 420
MunI	CAATTG	1 cut(s)	91
Mva1269I	GAATGC	2 cut(s)	1033, 1813
MvnI	CGCG	1 cut(s)	669
MwoI	GCNNNNNNNGC	5 cut(s)	638, 892, 990, 1488, 1591
NciI	CCSGG	2 cut(s)	218, 420
NcoI	CCATGG	1 cut(s)	1124
NmuCI	GTSAC	4 cut(s)	124, 946, 2179, 2210
NsbI	TGCGCA	1 cut(s)	1812
NspI	RCATGY	2 cut(s)	695, 2146
NspV	TTCGAA	2 cut(s)	1185, 1396
PagI	TCATGA	2 cut(s)	978, 1854
PcsI	WCGNNNNNNNCGW	1 cut(s)	1640
PctI	GAATGC	2 cut(s)	1033, 1813
PdmI	GAANNNNTTC	1 cut(s)	1181
PfeI	GAWTC	8 cut(s)	187, 276, 282, 574, 685, 1426, 1819, 1827
PflFI	GACNNNGTC	2 cut(s)	1645, 2132
PinAI	ACCGGT	2 cut(s)	1992, 2018
PkrI	GCNGC	5 cut(s)	118, 1162, 1390, 1484, 1531
Ple19I	CGATCG	1 cut(s)	603
PleI	GAGTC	3 cut(s)	247, 506, 2073
PpsI	GAGTC	3 cut(s)	247, 506, 2073
Ppu21I	YACGTR	2 cut(s)	124, 1541
Psp124BI	GAGCTC	1 cut(s)	835
Psp1406I	AACGTT	1 cut(s)	858
PspPI	GGNCC	4 cut(s)	1112, 1265, 1592, 2256
PstI	CTGCAG	3 cut(s)	292, 497, 1484
PstNI	CAGNNNCTG	2 cut(s)	301, 1064
PsuI	RGATCY	2 cut(s)	201, 297
PsyI	GACNNNGTC	2 cut(s)	1645, 2132
PvuI	CGATCG	1 cut(s)	603
RsaI	GTAC	6 cut(s)	26, 103, 504, 666, 1048, 1371
RsaNI	GTAC	6 cut(s)	25, 102, 503, 665, 1047, 1370
RseI	CAYNNNNRTG	3 cut(s)	1577, 1859, 2019
SacI	GAGCTC	1 cut(s)	835
SaqAI	TTAA	4 cut(s)	381, 564, 1227, 1520
SatI	GCNGC	5 cut(s)	117, 1161, 1389, 1483, 1530
Sau96I	GGNCC	4 cut(s)	1112, 1265, 1592, 2256
ScaI	AGTACT	1 cut(s)	26
SchI	GAGTC	3 cut(s)	247, 507, 2074
ScrFI	CCNGG	2 cut(s)	218, 420
SduI	GDGCHC	2 cut(s)	643, 835
SfaNI	GCATC	5 cut(s)	49, 505, 1329, 1478, 1711
SfcI	CTRYAG	4 cut(s)	288, 493, 900, 1480
SfiI	GGCCNNNNNGGCC	1 cut(s)	1591
SfuI	TTCGAA	2 cut(s)	1185, 1396
SinI	GGWCC	3 cut(s)	1112, 1265, 2256
SmiMI	CAYNNNNRTG	3 cut(s)	1577, 1859, 2019
SmlI	CTYRAG	2 cut(s)	248, 380
SmoI	CTYRAG	2 cut(s)	248, 380
Sse9I	AATT	5 cut(s)	91, 310, 952, 1392, 2172
SsiI	CCGC	6 cut(s)	695, 749, 993, 1110, 1160, 1485
SspMI	CTAG	2 cut(s)	41, 612
SstI	GAGCTC	1 cut(s)	835
StyD4I	CCNGG	2 cut(s)	216, 418
StyI	CCWWGG	4 cut(s)	542, 988, 1124, 2238
TaaI	ACNGT	8 cut(s)	179, 507, 709, 1041, 1206, 1612, 2123, 2216
TaiI	ACGT	6 cut(s)	126, 370, 782, 825, 861, 1543
TasI	AATT	5 cut(s)	91, 310, 952, 1392, 2172
TatI	WGTACW	3 cut(s)	24, 101, 1369
TauI	GCSGC	1 cut(s)	1163
TfiI	GAWTC	8 cut(s)	187, 276, 282, 574, 685, 1426, 1819, 1827
Tru1I	TTAA	4 cut(s)	381, 564, 1227, 1520
Tru9I	TTAA	4 cut(s)	381, 564, 1227, 1520
TscAI	CASTG	5 cut(s)	939, 1030, 1044, 1211, 2128
TseFI	GTSAC	4 cut(s)	124, 946, 2179, 2210
TseI	GCWGC	4 cut(s)	116, 1388, 1482, 1529
Tsp45I	GTSAC	4 cut(s)	124, 946, 2179, 2210
TspDTI	ATGAA	4 cut(s)	20, 1426, 1616, 1819
TspGWI	ACGGA	4 cut(s)	742, 1135, 1207, 2104
TspRI	CASTG	5 cut(s)	939, 1030, 1044, 1211, 2128
Tth111I	GACNNNGTC	2 cut(s)	1645, 2132
Vha464I	CTTAAG	1 cut(s)	380
VpaK11BI	GGWCC	3 cut(s)	1112, 1265, 2256
XapI	RAATTY	1 cut(s)	952
XceI	RCATGY	2 cut(s)	695, 2146
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1122
XmiI	GTMKAC	1 cut(s)	2139
XmnI	GAANNNNTTC	1 cut(s)	1181
XspI	CTAG	2 cut(s)	41, 612
ZraI	GACGTC	1 cut(s)	780
ZrmI	AGTACT	1 cut(s)	26

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.