Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0009530

Physical Location & Seq

Genomic Coordinates Forward (+)

26205728 .. 26208358

Gene Structure 2631 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g33140.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGAGGGAAAAGTACAAAGTTTTCTCCATGGTACACTCGAAGCTACCATCTTCCATGCCACACCTTATATACCACCACCATTCCCCTTCAATTGCATATTTGGTAATGGGAAGCCGGCATATGTGACCATCAAGATAGACAACAAGAAAGTAGCAAAAACAACCCATGAACGTGACCGTGTTTGGAACCAAACCTTTCAAATCCTATGTGCTCATTCATCAGATTCAACCATTACTATTACAATGAAAACCAAATGCACCATCTTGGGGAAATTTCAAATCCGTGCTCATCAGATACTAAGTGAAGCAAGCTTTATTAATGGTAATCTTCCTCTCCTAATCGAAAGTGGGAAGCCAAATCCAGAACTCAAGCTTCGGTTCATGTTATGGTTTAAGCCGGCAGAATTTGAACCAAGTTGGGGGAAAATGATTAGTTATGGAGAATTCCAAGGGCTGAGGAATGCAACATTTCCACAGAGATCAAATAGTCATGTCACGCTTTATCAAGATGCTCACCATTGCTCAAGTTTCAAGCCTTCGCCGAAGCTTTGTGGGACTCCAAGAAGACTATGGGAGGATGTATACAAAGCTATTGAGGGTGCGGAGCATTTGATTTACATTGCAGGCTGGTCTTTTAATCCAAAAATGGTCCTGGTCAGGGATCCTCAAACAGCAATCCCACATGCAAGAGGAGTGAAGCTTGGTGAACTACTGAAACAGAAAGCTGAAGAAGGGGTGGCGGTGAGAATTATGCTTTGGGATGATGAAACATCTTTACCACTTATCAAGAACGAAGGAATCATGAAAACACATGATGAAGATGCACTAGCCTACTTTTCACACACCAAAGTAGTATGCAAATTGTGCCCAAGGTTGCACAATAAGTTCCCCACAATCTTTTCTCACCATCAGAAAACCATAACAGTAGACACTAAATGTAGCATTAGTCCAAGGGAAAGAGAAATTATGAGCTTCATTGGTGGCCTGGATCTATGTGATGGGCGCTATGACACCGAGCAACATTCATTGTTCCACACACTCAACACAGAATCTCATTGCAATGATTTCTACCAGACGAACATTGCAGGCTTTAGCCTTCAGAAAGGAGGGCCAAGAACACCATGGCACGATGCTCATGCATGCATAACCGGGGAGGCTGCTTGGGATGTGCTAACGAATTTCGAGCAACGATGGAGTAAACAATGTGATTCTTCTGTATTGGTTCCTGCTAGCACCTTAACAAACTTGATTAGGCAGACTTACGCAAGTAAACCCTCCGAAAGAGGTTGGAATGTTCAAGTTCTTAGATCAATTGACCACGTTTCGGCCTCCCAATTGTTCCGAAATTTGACCGTGGAGCAAAGCATTCATGAGGCATATGTCAAAGCAATTAGAGGTGCTGATAGGTTTATCTACATTGAGAACCAATATTTCATAGGAGGCTGTGATTTGTGGGAGAGAGACCAACACTGTGGGTGTAGAAACTTGATTCCAATTGAGATTGCACTCAAGGTGGTGAATAAGATAAAAGCAAAGGAGAGGTTTGGGGTATACATAGTAATACCAATGTGGCCAGAAGGTCTACCTGAGAGTGAATCAGTTCAGGATATACTTCATTTGACTAGAGAAACAATGTCAATGATGTATAAGTTAGTAGGAGAAGCTATCAAAGAAAGTGGGACTCAGGAGCACCCAAGGGACTATTTGAACTTCTATTGCCTTGCCAATAGAGAAGTAGAGACCAAAGAAGACTTTGTTCCTCCACATTCTCCTCACAGTGGAACACAGTACTGGAATGCACAGAAGCATAGGAGGTTCATGGTGTATGTTCACTCCAAGCTCATGATAGTGGACGATGCATACCTTATCATAGGATCTGCAAACATAAACCAAAGATCAATGGATGGAAAGCGCGACACCGAGATTGCTATCGGATGCTATCAGACAATCAAAGATGGTGATCATGACAACAAGACTATAAGGATGTGCTCTGCAGGCGACATTGGAGCATACCGAATGTCACTATGGTACGAGCACACAGGCCGCGCTTTAGAGTTGTACAAACAACCTGAAAGCTTAGAATGTGTGAAGACGGTGCGTCACATCGGAGACCAGATGTGGAAGACTTACAGCGGTGAAGAAGTGGTCGACATGGAAGGTGTTCACCTTGTGACATACCCTATGAGTGTAACAAAGGACGGTGTTATTGAGGAACTTGCGCAAGGAGGTGGTCATTTTCCTGATACAGAGAGTATGGTCAAGGGCAAGAGATCAAAAGTTTTACTGCCAATATTTACTACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005575 GO:0005623 GO:0005886 GO:0006629 GO:0006644 GO:0006793 GO:0006796 GO:0006808 GO:0006950 GO:0006970 GO:0006995 GO:0007154 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0009056 GO:0009267 GO:0009395 GO:0009605 GO:0009628 GO:0009791 GO:0009825 GO:0009987 GO:0009991 GO:0016020 GO:0016036 GO:0016042 GO:0016049 GO:0016298 GO:0016787 GO:0016788 GO:0019637 GO:0022622 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0040007 GO:0042578 GO:0042594 GO:0043562 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044464 GO:0045848 GO:0046434 GO:0048364 GO:0048518 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051301 GO:0051365 GO:0051716 GO:0065007 GO:0071496 GO:0071704 GO:0071944 GO:0099402 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

768

Amino Acids

87.44

Weight (kDa)

7.2

Isoelectric Point (pI)

41.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLDc_2	PF13091	606 - 644	1.8e-06	PLD-like domain
PLDc	PF00614	610 - 633	1.2e-06	Phospholipase D Active site motif
PLD_C	PF12357	686 - 756	4e-24	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55180 AT1G55180
fragaria_vesca	FvH4_6g33140
malus_domestica	MD09G1194700.v1.1 MD17G1175200.v1.1
prunus_persica	Prupe.3G051200_v2.0.a1
pyrus_communis	pycom09g11160
rosa_chinensis	RchiOBHm_Chr2g0142831
rosa_laevigata	RLG00000019989
rosa_multiflora	Rmu_co8241083.1_g000001 Rmu_co8446503.1_g000001 Rmu_sc0012306.1_g000009 Rmu_sc0013116.1_g000004
rosa_roxburghii	Rroxscaffold_2G00102280 Rroxscaffold_2G00103320
rosa_rugosa	Rorug02G0375600 Rorug02G0375700
rosa_samantha	Rh2AG428800 Rh2BG438100 Rh2CG414300 Rh2DG447900
rosa_wichuraiana	Rw2G035060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2220
AccI	GTMKAC	5 cut(s)	582, 927, 1551, 1582, 2148
AccII	CGCG	2 cut(s)	1914, 2046
AciI	CCGC	4 cut(s)	602, 740, 2044, 2133
AclWI	GGATC	4 cut(s)	656, 669, 996, 1882
AcoI	YGGCCR	1 cut(s)	1571
AcsI	RAATTY	5 cut(s)	272, 404, 443, 1177, 1345
AcuI	CTGAAG	2 cut(s)	747, 1082
AdeI	CACNNNGTG	1 cut(s)	2170
AfaI	GTAC	5 cut(s)	15, 34, 1790, 2030, 2060
AfiI	CCNNNNNNNGG	5 cut(s)	267, 419, 658, 1324, 1778
AgsI	TTSAA	8 cut(s)	91, 200, 228, 278, 410, 532, 1298, 1708
AhdI	GACNNNNNGTC	1 cut(s)	2097
AjnI	CCWGG	2 cut(s)	651, 984
AjuI	GAANNNNNNNTTGG	2 cut(s)	739, 771
Alw21I	GWGCWC	5 cut(s)	214, 289, 1692, 1991, 2037
Alw26I	GTCTC	3 cut(s)	1455, 1733, 2103
AlwI	GGATC	4 cut(s)	656, 669, 996, 1882
AoxI	GGCC	5 cut(s)	982, 1109, 1326, 1571, 2041
ApeKI	GCWGC	1 cut(s)	1157
ApoI	RAATTY	5 cut(s)	272, 404, 443, 1177, 1345
AseI	ATTAAT	1 cut(s)	318
Asp700I	GAANNNNTTC	2 cut(s)	1599, 2160
AspLEI	GCGC	4 cut(s)	1005, 1914, 2048, 2221
AspS9I	GGNCC	2 cut(s)	649, 1109
AsuC2I	CCSGG	1 cut(s)	1150
AsuHPI	GGTGA	8 cut(s)	506, 716, 754, 896, 1528, 1970, 2147, 2156
AsuNHI	GCTAGC	1 cut(s)	1229
AvaII	GGWCC	1 cut(s)	649
BaeGI	GKGCMC	1 cut(s)	869
BalI	TGGCCA	1 cut(s)	1573
BamHI	GGATCC	1 cut(s)	661
BbsI	GAAGAC	4 cut(s)	571, 1755, 2096, 2129
Bbv12I	GWGCWC	5 cut(s)	214, 289, 1692, 1991, 2037
BbvCI	CCTCAGC	1 cut(s)	455
BbvI	GCAGC	1 cut(s)	1144
BccI	CCATC	8 cut(s)	56, 137, 269, 915, 992, 1185, 1898, 1949
BcgI	CGANNNNNNTGC	2 cut(s)	1118, 1152
BciT130I	CCWGG	2 cut(s)	653, 986
BclI	TGATCA	1 cut(s)	1960
BcnI	CCSGG	1 cut(s)	1150
BcoDI	GTCTC	3 cut(s)	1455, 1733, 2103
BfaI	CTAG	4 cut(s)	827, 1230, 1623, 2302
BfmI	CTRYAG	1 cut(s)	1992
BfoI	RGCGCY	1 cut(s)	1006
BisI	GCNGC	2 cut(s)	1158, 2044
BlsI	GCNGC	2 cut(s)	1159, 2045
BmcAI	AGTACT	1 cut(s)	1790
Bme1390I	CCNGG	3 cut(s)	653, 986, 1150
Bme18I	GGWCC	1 cut(s)	649
BmeRI	GACNNNNNGTC	1 cut(s)	2097
BmgT120I	GGNCC	2 cut(s)	649, 1109
BmiI	GGNNCC	3 cut(s)	188, 663, 1224
BmrFI	CCNGG	3 cut(s)	653, 986, 1150
BmsI	GCATC	5 cut(s)	499, 811, 1120, 1846, 1925
BmtI	GCTAGC	1 cut(s)	1233
BpiI	GAAGAC	4 cut(s)	571, 1755, 2096, 2129
Bpu10I	CCTNAGC	1 cut(s)	455
BpuEI	CTTGAG	3 cut(s)	353, 508, 1493
BpuMI	CCSGG	1 cut(s)	1150
BsaBI	GATNNNNATC	2 cut(s)	1928, 1959
BsaI	GGTCTC	3 cut(s)	1455, 1733, 2103
BsaJI	CCNNGG	8 cut(s)	28, 448, 869, 950, 1121, 1149, 1353, 1694
Bsc4I	CCNNNNNNNGG	5 cut(s)	267, 419, 658, 1324, 1778
Bse118I	RCCGGY	2 cut(s)	115, 397
Bse1I	ACTGG	1 cut(s)	1796
Bse3DI	GCAATG	5 cut(s)	517, 618, 1054, 1066, 1080
Bse8I	GATNNNNATC	2 cut(s)	1928, 1959
BseBI	CCWGG	2 cut(s)	653, 986
BseDI	CCNNGG	8 cut(s)	28, 448, 869, 950, 1121, 1149, 1353, 1694
BseGI	GGATG	6 cut(s)	583, 766, 1171, 1909, 1940, 1989
BseJI	GATNNNNATC	2 cut(s)	1928, 1959
BseLI	CCNNNNNNNGG	5 cut(s)	267, 419, 658, 1324, 1778
BseMI	GCAATG	5 cut(s)	517, 618, 1054, 1066, 1080
BseMII	CTCAG	3 cut(s)	446, 1578, 1697
BseNI	ACTGG	1 cut(s)	1796
BseRI	GAGGAG	2 cut(s)	705, 1761
BseSI	GKGCMC	1 cut(s)	869
BseXI	GCAGC	1 cut(s)	1144
Bsh1236I	CGCG	2 cut(s)	1914, 2046
BshFI	GGCC	5 cut(s)	984, 1111, 1328, 1573, 2043
BsiHKAI	GWGCWC	5 cut(s)	214, 289, 1692, 1991, 2037
BsiSI	CCGG	3 cut(s)	116, 398, 1149
BslFI	GGGAC	3 cut(s)	568, 1693, 1712
BslI	CCNNNNNNNGG	5 cut(s)	267, 419, 658, 1324, 1778
BsmAI	GTCTC	3 cut(s)	1455, 1733, 2103
BsmFI	GGGAC	3 cut(s)	568, 1693, 1712
BsmI	GAATGC	3 cut(s)	466, 1365, 1801
BsnI	GGCC	5 cut(s)	984, 1111, 1328, 1573, 2043
Bso31I	GGTCTC	3 cut(s)	1455, 1733, 2103
Bsp1286I	GDGCHC	6 cut(s)	214, 289, 869, 1692, 1991, 2037
Bsp1407I	TGTACA	1 cut(s)	2058
Bsp143I	GATC	8 cut(s)	479, 661, 988, 1307, 1874, 1895, 1960, 2270
Bsp19I	CCATGG	2 cut(s)	28, 1121
BspACI	CCGC	4 cut(s)	602, 740, 2044, 2133
BspANI	GGCC	5 cut(s)	984, 1111, 1328, 1573, 2043
BspCNI	CTCAG	3 cut(s)	447, 1579, 1696
BspFNI	CGCG	2 cut(s)	1914, 2046
BspHI	TCATGA	4 cut(s)	801, 1369, 1842, 1963
BspLI	GGNNCC	3 cut(s)	188, 663, 1224
BspMAI	CTGCAG	1 cut(s)	1996
BspOI	GCTAGC	1 cut(s)	1233
BspPI	GGATC	4 cut(s)	656, 669, 996, 1882
BspTNI	GGTCTC	3 cut(s)	1455, 1733, 2103
BsrDI	GCAATG	5 cut(s)	517, 618, 1054, 1066, 1080
BsrFI	RCCGGY	2 cut(s)	115, 397
BsrGI	TGTACA	1 cut(s)	2058
BsrI	ACTGG	1 cut(s)	1796
BssAI	RCCGGY	2 cut(s)	115, 397
BssECI	CCNNGG	8 cut(s)	28, 448, 869, 950, 1121, 1149, 1353, 1694
BssMI	GATC	8 cut(s)	479, 661, 988, 1307, 1874, 1895, 1960, 2270
BssNAI	GTATAC	2 cut(s)	583, 1552
BssT1I	CCWWGG	6 cut(s)	28, 448, 869, 950, 1121, 1694
Bst1107I	GTATAC	2 cut(s)	583, 1552
Bst2UI	CCWGG	2 cut(s)	653, 986
Bst4CI	ACNGT	8 cut(s)	179, 925, 1354, 1472, 1778, 1788, 2095, 2201
BstAPI	GCANNNNNTGC	1 cut(s)	864
BstAUI	TGTACA	1 cut(s)	2058
BstC8I	GCNNGC	8 cut(s)	117, 310, 399, 625, 1087, 1141, 1231, 1996
BstDEI	CTNAG	6 cut(s)	299, 455, 1304, 1587, 1683, 2077
BstDSI	CCRYGG	3 cut(s)	28, 1121, 1353
BstF5I	GGATG	6 cut(s)	583, 766, 1171, 1909, 1940, 1989
BstFNI	CGCG	2 cut(s)	1914, 2046
BstH2I	RGCGCY	1 cut(s)	1006
BstHHI	GCGC	4 cut(s)	1005, 1914, 2048, 2221
BstKTI	GATC	8 cut(s)	482, 664, 991, 1310, 1877, 1898, 1963, 2273
BstMAI	GTCTC	3 cut(s)	1455, 1733, 2103
BstMBI	GATC	8 cut(s)	479, 661, 988, 1307, 1874, 1895, 1960, 2270
BstMWI	GCNNNNNNNGC	2 cut(s)	864, 1995
BstNI	CCWGG	2 cut(s)	653, 986
BstNSI	RCATGY	2 cut(s)	686, 1143
BstSCI	CCNGG	3 cut(s)	651, 984, 1148
BstSFI	CTRYAG	1 cut(s)	1992
BstSLI	GKGCMC	1 cut(s)	869
BstUI	CGCG	2 cut(s)	1914, 2046
BstV1I	GCAGC	1 cut(s)	1144
BstV2I	GAAGAC	4 cut(s)	571, 1755, 2096, 2129
BstX2I	RGATCY	3 cut(s)	661, 988, 1874
BstXI	CCANNNNNNTGG	1 cut(s)	1472
BstYI	RGATCY	3 cut(s)	661, 988, 1874
BstZ17I	GTATAC	2 cut(s)	583, 1552
BsuRI	GGCC	5 cut(s)	984, 1111, 1328, 1573, 2043
BtgI	CCRYGG	3 cut(s)	28, 1121, 1353
BtsCI	GGATG	6 cut(s)	583, 766, 1171, 1909, 1940, 1989
BtsIMutI	CAGTG	2 cut(s)	1468, 1783
Cac8I	GCNNGC	8 cut(s)	117, 310, 399, 625, 1087, 1141, 1231, 1996
CciI	TCATGA	4 cut(s)	801, 1369, 1842, 1963
CfoI	GCGC	4 cut(s)	1005, 1914, 2048, 2221
Cfr10I	RCCGGY	2 cut(s)	115, 397
Cfr13I	GGNCC	2 cut(s)	649, 1109
CseI	GACGC	1 cut(s)	2087
Csp6I	GTAC	5 cut(s)	14, 33, 1789, 2029, 2059
CspCI	CAANNNNNGTGG	2 cut(s)	1657, 1692
CviQI	GTAC	5 cut(s)	14, 33, 1789, 2029, 2059
DdeI	CTNAG	6 cut(s)	299, 455, 1304, 1587, 1683, 2077
DpnI	GATC	8 cut(s)	481, 663, 990, 1309, 1876, 1897, 1962, 2272
DpnII	GATC	8 cut(s)	479, 661, 988, 1307, 1874, 1895, 1960, 2270
DraIII	CACNNNGTG	1 cut(s)	2170
DriI	GACNNNNNGTC	1 cut(s)	2097
EaeI	YGGCCR	1 cut(s)	1571
Eam1105I	GACNNNNNGTC	1 cut(s)	2097
Eco130I	CCWWGG	6 cut(s)	28, 448, 869, 950, 1121, 1694
Eco31I	GGTCTC	3 cut(s)	1455, 1733, 2103
Eco47I	GGWCC	1 cut(s)	649
Eco57I	CTGAAG	2 cut(s)	747, 1082
EcoRI	GAATTC	1 cut(s)	443
EcoRII	CCWGG	2 cut(s)	651, 984
EcoT14I	CCWWGG	6 cut(s)	28, 448, 869, 950, 1121, 1694
EcoT22I	ATGCAT	3 cut(s)	1141, 1145, 1861
ErhI	CCWWGG	6 cut(s)	28, 448, 869, 950, 1121, 1694
FaqI	GGGAC	3 cut(s)	568, 1693, 1712
FauNDI	CATATG	2 cut(s)	121, 1378
FbaI	TGATCA	1 cut(s)	1960
FblI	GTMKAC	5 cut(s)	582, 927, 1551, 1582, 2148
Fnu4HI	GCNGC	2 cut(s)	1158, 2044
FokI	GGATG	6 cut(s)	590, 773, 1178, 1916, 1947, 1996
Fsp4HI	GCNGC	2 cut(s)	1158, 2044
FspBI	CTAG	4 cut(s)	827, 1230, 1623, 2302
FspI	TGCGCA	1 cut(s)	2220
GlaI	GCGC	4 cut(s)	1004, 1913, 2047, 2220
GluI	GCNGC	2 cut(s)	1158, 2044
HaeII	RGCGCY	1 cut(s)	1006
HaeIII	GGCC	5 cut(s)	984, 1111, 1328, 1573, 2043
HapII	CCGG	3 cut(s)	116, 398, 1149
HgaI	GACGC	1 cut(s)	2087
HhaI	GCGC	4 cut(s)	1005, 1914, 2048, 2221
Hin6I	GCGC	4 cut(s)	1003, 1912, 2046, 2219
HinP1I	GCGC	4 cut(s)	1003, 1912, 2046, 2219
HincII	GTYRAC	1 cut(s)	2149
HindII	GTYRAC	1 cut(s)	2149
HindIII	AAGCTT	5 cut(s)	310, 371, 545, 698, 2074
HinfI	GANTC	8 cut(s)	224, 556, 798, 1049, 1208, 1489, 1595, 1681
HpaII	CCGG	3 cut(s)	116, 398, 1149
HphI	GGTGA	8 cut(s)	506, 716, 754, 896, 1528, 1970, 2147, 2156
Hpy188I	TCNGA	9 cut(s)	223, 294, 912, 1101, 1279, 1343, 1934, 1944, 2108
HpyAV	CCTTC	7 cut(s)	97, 546, 725, 788, 1106, 1571, 2150
HpyCH4III	ACNGT	8 cut(s)	179, 925, 1354, 1472, 1778, 1788, 2095, 2201
HpyCH4IV	ACGT	2 cut(s)	172, 1320
HpyF10VI	GCNNNNNNNGC	2 cut(s)	864, 1995
HpyF3I	CTNAG	6 cut(s)	299, 455, 1304, 1587, 1683, 2077
HpySE526I	ACGT	2 cut(s)	172, 1320
HspAI	GCGC	4 cut(s)	1003, 1912, 2046, 2219
KroI	GCCGGC	2 cut(s)	115, 397
KroNI	GCCGGC	2 cut(s)	117, 399
Ksp22I	TGATCA	1 cut(s)	1960
Kzo9I	GATC	8 cut(s)	479, 661, 988, 1307, 1874, 1895, 1960, 2270
LmnI	GCTCC	4 cut(s)	604, 1357, 1687, 2006
Lsp1109I	GCAGC	1 cut(s)	1144
LweI	GCATC	5 cut(s)	499, 811, 1120, 1846, 1925
MaeI	CTAG	4 cut(s)	827, 1230, 1623, 2302
MaeII	ACGT	2 cut(s)	172, 1320
MaeIII	GTNAC	7 cut(s)	124, 173, 493, 2019, 2099, 2170, 2188
MalI	GATC	8 cut(s)	481, 663, 990, 1309, 1876, 1897, 1962, 2272
MboI	GATC	8 cut(s)	479, 661, 988, 1307, 1874, 1895, 1960, 2270
MfeI	CAATTG	4 cut(s)	91, 1311, 1334, 1494
MflI	RGATCY	3 cut(s)	661, 988, 1874
MhlI	GDGCHC	6 cut(s)	214, 289, 869, 1692, 1991, 2037
MlsI	TGGCCA	1 cut(s)	1573
MluNI	TGGCCA	1 cut(s)	1573
MlyI	GAGTC	2 cut(s)	550, 1675
MmeI	TCCRAC	1 cut(s)	1268
Mox20I	TGGCCA	1 cut(s)	1573
Mph1103I	ATGCAT	3 cut(s)	1141, 1145, 1861
MroNI	GCCGGC	2 cut(s)	115, 397
MroXI	GAANNNNTTC	2 cut(s)	1599, 2160
MscI	TGGCCA	1 cut(s)	1573
MseI	TTAA	4 cut(s)	318, 393, 636, 1238
MslI	CAYNNNNRTG	3 cut(s)	171, 1059, 1847
Msp20I	TGGCCA	1 cut(s)	1573
MspA1I	CMGCKG	1 cut(s)	2133
MspI	CCGG	3 cut(s)	116, 398, 1149
MspR9I	CCNGG	3 cut(s)	653, 986, 1150
MunI	CAATTG	4 cut(s)	91, 1311, 1334, 1494
Mva1269I	GAATGC	3 cut(s)	466, 1365, 1801
MvaI	CCWGG	2 cut(s)	653, 986
MvnI	CGCG	2 cut(s)	1914, 2046
MwoI	GCNNNNNNNGC	2 cut(s)	864, 1995
NaeI	GCCGGC	2 cut(s)	117, 399
NciI	CCSGG	1 cut(s)	1150
NcoI	CCATGG	2 cut(s)	28, 1121
NdeI	CATATG	2 cut(s)	121, 1378
NdeII	GATC	8 cut(s)	479, 661, 988, 1307, 1874, 1895, 1960, 2270
NgoMIV	GCCGGC	2 cut(s)	115, 397
NheI	GCTAGC	1 cut(s)	1229
NlaIV	GGNNCC	3 cut(s)	188, 663, 1224
NmuCI	GTSAC	6 cut(s)	124, 173, 493, 2019, 2099, 2170
NsbI	TGCGCA	1 cut(s)	2220
NsiI	ATGCAT	3 cut(s)	1141, 1145, 1861
NspI	RCATGY	2 cut(s)	686, 1143
PaeI	GCATGC	1 cut(s)	1143
PagI	TCATGA	4 cut(s)	801, 1369, 1842, 1963
PctI	GAATGC	3 cut(s)	466, 1365, 1801
PdiI	GCCGGC	2 cut(s)	117, 399
PdmI	GAANNNNTTC	2 cut(s)	1599, 2160
PfeI	GAWTC	6 cut(s)	224, 798, 1049, 1208, 1489, 1595
PkrI	GCNGC	2 cut(s)	1159, 2045
PleI	GAGTC	2 cut(s)	550, 1675
PpsI	GAGTC	2 cut(s)	550, 1675
PshBI	ATTAAT	1 cut(s)	318
Psp6I	CCWGG	2 cut(s)	651, 984
PspGI	CCWGG	2 cut(s)	651, 984
PspN4I	GGNNCC	3 cut(s)	188, 663, 1224
PspPI	GGNCC	2 cut(s)	649, 1109
PstI	CTGCAG	1 cut(s)	1996
PsuI	RGATCY	3 cut(s)	661, 988, 1874
RsaI	GTAC	5 cut(s)	15, 34, 1790, 2030, 2060
RsaNI	GTAC	5 cut(s)	14, 33, 1789, 2029, 2059
RseI	CAYNNNNRTG	3 cut(s)	171, 1059, 1847
SalI	GTCGAC	1 cut(s)	2147
SaqAI	TTAA	4 cut(s)	318, 393, 636, 1238
SatI	GCNGC	2 cut(s)	1158, 2044
Sau3AI	GATC	8 cut(s)	479, 661, 988, 1307, 1874, 1895, 1960, 2270
Sau96I	GGNCC	2 cut(s)	649, 1109
ScaI	AGTACT	1 cut(s)	1790
SchI	GAGTC	2 cut(s)	550, 1675
ScrFI	CCNGG	3 cut(s)	653, 986, 1150
SduI	GDGCHC	6 cut(s)	214, 289, 869, 1692, 1991, 2037
SfaNI	GCATC	5 cut(s)	499, 811, 1120, 1846, 1925
SfcI	CTRYAG	1 cut(s)	1992
SinI	GGWCC	1 cut(s)	649
SmiMI	CAYNNNNRTG	3 cut(s)	171, 1059, 1847
SmlI	CTYRAG	3 cut(s)	368, 523, 1508
SmoI	CTYRAG	3 cut(s)	368, 523, 1508
SphI	GCATGC	1 cut(s)	1143
SsiI	CCGC	4 cut(s)	602, 740, 2044, 2133
SspI	AATATT	2 cut(s)	1430, 2292
SspMI	CTAG	4 cut(s)	827, 1230, 1623, 2302
StyD4I	CCNGG	3 cut(s)	651, 984, 1148
StyI	CCWWGG	6 cut(s)	28, 448, 869, 950, 1121, 1694
TaaI	ACNGT	8 cut(s)	179, 925, 1354, 1472, 1778, 1788, 2095, 2201
TaiI	ACGT	2 cut(s)	175, 1323
TaqI	TCGA	4 cut(s)	39, 342, 1182, 2148
TatI	WGTACW	3 cut(s)	13, 1788, 2058
TauI	GCSGC	1 cut(s)	2046
TfiI	GAWTC	6 cut(s)	224, 798, 1049, 1208, 1489, 1595
Tru1I	TTAA	4 cut(s)	318, 393, 636, 1238
Tru9I	TTAA	4 cut(s)	318, 393, 636, 1238
TscAI	CASTG	2 cut(s)	1475, 1783
TseFI	GTSAC	6 cut(s)	124, 173, 493, 2019, 2099, 2170
TseI	GCWGC	1 cut(s)	1157
Tsp45I	GTSAC	6 cut(s)	124, 173, 493, 2019, 2099, 2170
TspGWI	ACGGA	1 cut(s)	272
TspRI	CASTG	2 cut(s)	1475, 1783
VpaK11BI	GGWCC	1 cut(s)	649
VspI	ATTAAT	1 cut(s)	318
XapI	RAATTY	5 cut(s)	272, 404, 443, 1177, 1345
XceI	RCATGY	2 cut(s)	686, 1143
XcmI	CCANNNNNNNNNTGG	2 cut(s)	567, 1119
XmiI	GTMKAC	5 cut(s)	582, 927, 1551, 1582, 2148
XmnI	GAANNNNTTC	2 cut(s)	1599, 2160
XspI	CTAG	4 cut(s)	827, 1230, 1623, 2302
ZrmI	AGTACT	1 cut(s)	1790
Zsp2I	ATGCAT	3 cut(s)	1141, 1145, 1861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.