Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003097

Physical Location & Seq

Genomic Coordinates Reverse (-)

21548140 .. 21553266

Gene Structure 5127 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G58200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGATGATGCGTACTGTTGCTTTACCATTGTCCCATGATCTGAATGTTCATAAGATCCATGAAGCTTCTGGATTCCATAATAGTGCTGCTGGTAAAAATCGTGTGTATCTGACTCGGACTGGTCTTTCATCATGTGCCACGAGACAAGACGTTTGGAGTCTTCAGCTACTAGAGAGCTTGAGTGGTTCAATAGTACCTGTATCATCTAGGTGTAATGCATTTGTTTGCCGGTCAGCTCTCTCTCCTGGGAATGGAAATGAAGGCCCTATTCTTAAATCAACTGCAGTAATATTCACAAGGGTATATGATGCTTTAGGTGGAAATCCTCATTTAGTGAAACTAATTCCAGCGGTTGGGATTCTTGCATTTGCTACATGGGGTCTTAGACCCCTTCTGCGCCTTGCCAGAACTACCCTGTTTGAGAAGGGGAATGATGCAAATTCACAGAAGAGTAGCACGCAGTACATTGTTGTGTCATATCTTCAACCTTTGCTGCTTTGGAGCGGAGCAATCCTTTTATGCAGAACATTGGACCCAATAGTATTGCCTTCAAGTGCCGGCCAGGCTATTAAACAGCGTCTTCTGATCTTTGCTCGGTCCATATCAACGGTGTTGGCATTTTCCTGCTGTTTATCAAGCCTACTTCAGCAGGTGCAGAAATTTTTTATGGAGACAAATAATCCTGCTGATACCAGAAATATGGGTTTCAGTTTTGCTGGAAAAGCTGTTTACACTGCTGCGTGGGTTGCTGCTGCTTCATTGTTTATGGAACTGTTAGGCTTCTCTACCCAAAAATGGCTAACGGCTGGGGGTCTGGGGACAGTACTGCTAACTCTTGCTGGCCGTGAGATACTTACTAACTTTCTTTCAAGCATTATGATTCATGCTACACGGCCCTTTGTTCTGAATGAGTGGATCCAGACCAAGATAGGAGGCTATGAAGTTTCTGGCACAGTAGAGCAAGTCGGTTGGTGGTCACCTACAATTATCAGAGGTGATGACCGGGAAGCAGTTCATATTCCTAACCACCAGTTCAGTGTGAATATTGTGAGAAATCTCACTCAGAAGACGCATTGGCGCATCAAAACACATCTTGCCATCAGTCATCTTGATGTCAGCAAAATTAATAATATCGTGGCTGATATGCGCAAGGTGTTGTCTAAAAATCCTCAAATCGAGCAGCAAAAAATACACAGAAGAGTCTTTCTGGAGGATATAGATCCAGAGAACCAAGCCCTTAGGATTCTAATATCCTGTTTTGTCAAGACTTCACGTTTTGAAGAATACCTGTGCGTTAAGGAAGCAGTGCTCTTGGATCTTCTTACTGTTATTAGGCATCACGGGGCACGTCTAGCAACTCCCATTAGAACAGTACAGAGGATGCGTAATGAGGCTGAGGTGGACACTGCAGGATTTTCAGACATCGTTTTCAATCAAGCAGCAATGAACCGCCGATACATGCTGATTGAGCCATCTTATAAAATCAACAGCGATGACAATTCAAAGTCTCCCTCACCCAGCCCAGGGCAAAAGTCACCCAGCCCAGGGCAAAAGAGTGAAGAAAGGGACCTTCAAGAAGAACCATCGGAAACCAAGGCCGAAACAGAAAACAACGGATCGGTGCCGGTTTCAAATGCCAAAAAGGAAAACCAGAAAGCGGCTCTTGGTTCCAACTCCAATACAGGCACTAAGGGTTCATCAACCTCAACATCTGACCAGCCAGTAGCACAAAAGTCAGAAGAAAAGAAGAAAGAGAGCGTGGGAGATCCACATAAAGCAGAGAAGGATGAAGTTTCTGATGACGAAGCTACAATAGAGCAGACACTGAAATCAAAAGCAAAACAAGGGAGCGAGAAAAACAATGGAGAGTCGAAAGCTCGAGATGGTGGTGGGTCCGGTACTAGTTCTTTACTGGAGGAGAATCTTGTTCTTGGTGTTGCGTTGGATGGCTCAAAACGTACACTCCCGATTGATGAAGAACACAAAGCATCTGGTGCACTAATGGATTCAGAAGAACTTGGTATTGGATCAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010020 GO:0016043 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

678

Amino Acids

74.19

Weight (kDa)

8.58

Isoelectric Point (pI)

42.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MSL2_3	PF25237	153 - 282	1.5e-65	Mechanosensitive channel protein 2/3 domain
MS_channel_2nd	PF00924	284 - 354	5.4e-11	Mechanosensitive ion channel, beta-domain
Msl2-3_C	PF24956	359 - 445	7.6e-44	Mechanosensitive ion channel protein 2/3 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58200 AT1G58200
fragaria_vesca	FvH4_5g35370 FvH4_5g35370 FvH4_5g35370 FvH4_5g35370 FvH4_5g35370 FvH4_5g35370
malus_domestica	MD08G1197800.v1.1
prunus_persica	Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1 Prupe.1G531900_v2.0.a1
pyrus_communis	pycom15g34530
rosa_chinensis	RchiOBHm_Chr7g0236721
rosa_laevigata	RLG00000001066
rosa_multiflora	Rmu_co8258783.1_g000001 Rmu_sc0003720.1_g000014 Rmu_sc0011298.1_g000003
rosa_roxburghii	Rroxscaffold_3G00224920
rosa_rugosa	Rorug07G0298400 Rorug07G0298500 Rorug07G0298600
rosa_samantha	Rh7AG454000 Rh7BG424700 Rh7CG472300 Rh7DG441300
rosa_wichuraiana	Rw7G037640 Rw7G037670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1479
AarI	CACCTGC	1 cut(s)	640
Acc16I	TGCGCA	1 cut(s)	1148
Acc36I	ACCTGC	1 cut(s)	640
AccB1I	GGYRCC	1 cut(s)	1621
AccB7I	CCANNNNNTGG	1 cut(s)	353
AccBSI	CCGCTC	1 cut(s)	504
AciI	CCGC	4 cut(s)	350, 504, 1450, 1658
AclWI	GGATC	8 cut(s)	49, 910, 923, 1214, 1323, 1624, 1760, 2035
AcoI	YGGCCR	2 cut(s)	559, 841
AcsI	RAATTY	2 cut(s)	439, 659
AcuI	CTGAAG	2 cut(s)	146, 629
AfaI	GTAC	7 cut(s)	13, 195, 464, 825, 1374, 1900, 1960
AfiI	CCNNNNNNNGG	8 cut(s)	251, 353, 795, 1523, 1524, 1544, 1545, 1657
AgsI	TTSAA	9 cut(s)	189, 485, 552, 870, 1280, 1432, 1503, 1574, 1632
AhlI	ACTAGT	1 cut(s)	1901
AjiI	CACGTC	1 cut(s)	1349
AjnI	CCWGG	4 cut(s)	244, 561, 1522, 1543
AjuI	GAANNNNNNNTTGG	1 cut(s)	2007
AluBI	AGCT	7 cut(s)	65, 166, 177, 236, 725, 1808, 1877
AluI	AGCT	7 cut(s)	65, 166, 177, 236, 725, 1808, 1877
Alw21I	GWGCWC	2 cut(s)	1311, 1999
Alw26I	GTCTC	3 cut(s)	136, 665, 1512
Alw44I	GTGCAC	1 cut(s)	1995
AlwI	GGATC	8 cut(s)	49, 910, 923, 1214, 1323, 1624, 1760, 2035
AlwNI	CAGNNNCTG	1 cut(s)	1825
Ama87I	CYCGRG	1 cut(s)	1878
AoxI	GGCC	5 cut(s)	262, 559, 841, 893, 1596
ApaLI	GTGCAC	1 cut(s)	1995
ApeKI	GCWGC	7 cut(s)	86, 493, 737, 749, 752, 1180, 1439
ApoI	RAATTY	2 cut(s)	439, 659
ArsI	GACNNNNNNTTYG	2 cut(s)	135, 167
AseI	ATTAAT	1 cut(s)	1125
Asp700I	GAANNNNTTC	1 cut(s)	1011
AspLEI	GCGC	3 cut(s)	399, 1080, 1149
AspS9I	GGNCC	6 cut(s)	263, 532, 597, 894, 1567, 1893
AsuC2I	CCSGG	1 cut(s)	1004
AsuHPI	GGTGA	4 cut(s)	969, 1007, 1506, 1527
AvaI	CYCGRG	1 cut(s)	1878
AvaII	GGWCC	4 cut(s)	532, 597, 1567, 1893
AxyI	CCTNAGG	1 cut(s)	1238
BaeGI	GKGCMC	2 cut(s)	1348, 1999
BamHI	GGATCC	1 cut(s)	915
BanI	GGYRCC	1 cut(s)	1621
BauI	CACGAG	1 cut(s)	139
BbsI	GAAGAC	3 cut(s)	152, 572, 1073
Bbv12I	GWGCWC	2 cut(s)	1311, 1999
BbvCI	CCTCAGC	1 cut(s)	1395
BbvI	GCAGC	7 cut(s)	73, 480, 724, 736, 739, 1192, 1451
BccI	CCATC	5 cut(s)	1106, 1480, 1591, 1877, 1940
BceAI	ACGGC	3 cut(s)	819, 828, 908
BciT130I	CCWGG	4 cut(s)	246, 563, 1524, 1545
BcnI	CCSGG	1 cut(s)	1004
BcoDI	GTCTC	3 cut(s)	136, 665, 1512
BcuI	ACTAGT	1 cut(s)	1901
BfaI	CTAG	4 cut(s)	170, 207, 1352, 1902
BfmI	CTRYAG	2 cut(s)	282, 1407
BfuAI	ACCTGC	1 cut(s)	640
BglI	GCCNNNNNGGC	1 cut(s)	563
BisI	GCNGC	8 cut(s)	87, 494, 738, 750, 753, 1181, 1440, 1659
BlsI	GCNGC	8 cut(s)	88, 495, 739, 751, 754, 1182, 1441, 1660
BmcAI	AGTACT	1 cut(s)	825
Bme1390I	CCNGG	5 cut(s)	246, 563, 1004, 1524, 1545
Bme18I	GGWCC	4 cut(s)	532, 597, 1567, 1893
BmeT110I	CYCGRG	1 cut(s)	1878
BmgBI	CACGTC	1 cut(s)	1349
BmgT120I	GGNCC	6 cut(s)	263, 532, 597, 894, 1567, 1893
BmiI	GGNNCC	6 cut(s)	534, 917, 1568, 1623, 1669, 1894
BmrFI	CCNGG	5 cut(s)	246, 563, 1004, 1524, 1545
BmsI	GCATC	6 cut(s)	298, 424, 1089, 1345, 1371, 1997
BpiI	GAAGAC	3 cut(s)	152, 572, 1073
BpmI	CTGGAG	2 cut(s)	1229, 1934
Bpu10I	CCTNAGC	1 cut(s)	1395
BpuEI	CTTGAG	1 cut(s)	199
BpuMI	CCSGG	1 cut(s)	1004
BsaBI	GATNNNNATC	1 cut(s)	1218
BsaJI	CCNNGG	6 cut(s)	245, 1522, 1523, 1543, 1544, 1593
BsaWI	WCCGGW	1 cut(s)	1895
BsaXI	ACNNNNNCTCC	2 cut(s)	1947, 1977
Bsc4I	CCNNNNNNNGG	8 cut(s)	251, 353, 795, 1523, 1524, 1544, 1545, 1657
Bse118I	RCCGGY	3 cut(s)	228, 557, 1624
Bse1I	ACTGG	4 cut(s)	124, 1030, 1721, 1917
Bse21I	CCTNAGG	1 cut(s)	1238
Bse3DI	GCAATG	1 cut(s)	1449
Bse8I	GATNNNNATC	1 cut(s)	1218
BseBI	CCWGG	4 cut(s)	246, 563, 1524, 1545
BseDI	CCNNGG	6 cut(s)	245, 1522, 1523, 1543, 1544, 1593
BseGI	GGATG	3 cut(s)	1386, 1792, 1951
BseJI	GATNNNNATC	1 cut(s)	1218
BseLI	CCNNNNNNNGG	8 cut(s)	251, 353, 795, 1523, 1524, 1544, 1545, 1657
BseMI	GCAATG	1 cut(s)	1449
BseMII	CTCAG	2 cut(s)	1076, 1386
BseNI	ACTGG	4 cut(s)	124, 1030, 1721, 1917
BseRI	GAGGAG	1 cut(s)	1931
BseSI	GKGCMC	2 cut(s)	1348, 1999
BseXI	GCAGC	7 cut(s)	73, 480, 724, 736, 739, 1192, 1451
BseYI	CCCAGC	3 cut(s)	806, 1517, 1538
BsgI	GTGCAG	1 cut(s)	674
BshFI	GGCC	5 cut(s)	264, 561, 843, 895, 1598
BshNI	GGYRCC	1 cut(s)	1621
BsiHKAI	GWGCWC	2 cut(s)	1311, 1999
BsiHKCI	CYCGRG	1 cut(s)	1878
BsiSI	CCGG	5 cut(s)	229, 558, 1003, 1625, 1896
BslFI	GGGAC	3 cut(s)	16, 832, 1580
BslI	CCNNNNNNNGG	8 cut(s)	251, 353, 795, 1523, 1524, 1544, 1545, 1657
BsmAI	GTCTC	3 cut(s)	136, 665, 1512
BsmFI	GGGAC	3 cut(s)	16, 832, 1580
BsnI	GGCC	5 cut(s)	264, 561, 843, 895, 1598
BsoBI	CYCGRG	1 cut(s)	1878
Bsp1286I	GDGCHC	3 cut(s)	1311, 1348, 1999
Bsp143I	GATC	9 cut(s)	37, 54, 585, 915, 1219, 1315, 1616, 1765, 2027
BspACI	CCGC	4 cut(s)	350, 504, 1450, 1658
BspANI	GGCC	5 cut(s)	264, 561, 843, 895, 1598
BspCNI	CTCAG	2 cut(s)	1075, 1387
BspLI	GGNNCC	6 cut(s)	534, 917, 1568, 1623, 1669, 1894
BspMAI	CTGCAG	2 cut(s)	286, 1411
BspMI	ACCTGC	1 cut(s)	640
BspPI	GGATC	8 cut(s)	49, 910, 923, 1214, 1323, 1624, 1760, 2035
BspT107I	GGYRCC	1 cut(s)	1621
BsrBI	CCGCTC	1 cut(s)	504
BsrDI	GCAATG	1 cut(s)	1449
BsrFI	RCCGGY	3 cut(s)	228, 557, 1624
BsrI	ACTGG	4 cut(s)	124, 1030, 1721, 1917
BssAI	RCCGGY	3 cut(s)	228, 557, 1624
BssECI	CCNNGG	6 cut(s)	245, 1522, 1523, 1543, 1544, 1593
BssMI	GATC	9 cut(s)	37, 54, 585, 915, 1219, 1315, 1616, 1765, 2027
BssSI	CACGAG	1 cut(s)	139
BssT1I	CCWWGG	1 cut(s)	1593
Bst2BI	CACGAG	1 cut(s)	139
Bst2UI	CCWGG	4 cut(s)	246, 563, 1524, 1545
Bst4CI	ACNGT	7 cut(s)	16, 610, 774, 823, 955, 1327, 1372
Bst6I	CTCTTC	2 cut(s)	443, 1192
BstAPI	GCANNNNNTGC	1 cut(s)	1994
BstC8I	GCNNGC	3 cut(s)	458, 559, 841
BstDEI	CTNAG	5 cut(s)	383, 1062, 1238, 1395, 1689
BstEII	GGTNACC	1 cut(s)	975
BstF5I	GGATG	3 cut(s)	1386, 1792, 1951
BstHHI	GCGC	3 cut(s)	399, 1080, 1149
BstKTI	GATC	9 cut(s)	40, 57, 588, 918, 1222, 1318, 1619, 1768, 2030
BstMAI	GTCTC	3 cut(s)	136, 665, 1512
BstMBI	GATC	9 cut(s)	37, 54, 585, 915, 1219, 1315, 1616, 1765, 2027
BstMWI	GCNNNNNNNGC	6 cut(s)	563, 722, 746, 1352, 1468, 1994
BstNI	CCWGG	4 cut(s)	246, 563, 1524, 1545
BstNSI	RCATGY	1 cut(s)	1462
BstPI	GGTNACC	1 cut(s)	975
BstSCI	CCNGG	5 cut(s)	244, 561, 1002, 1522, 1543
BstSFI	CTRYAG	2 cut(s)	282, 1407
BstSLI	GKGCMC	2 cut(s)	1348, 1999
BstV1I	GCAGC	7 cut(s)	73, 480, 724, 736, 739, 1192, 1451
BstV2I	GAAGAC	3 cut(s)	152, 572, 1073
BstX2I	RGATCY	5 cut(s)	54, 915, 1219, 1315, 1765
BstXI	CCANNNNNNTGG	1 cut(s)	700
BstYI	RGATCY	5 cut(s)	54, 915, 1219, 1315, 1765
Bsu36I	CCTNAGG	1 cut(s)	1238
BsuRI	GGCC	5 cut(s)	264, 561, 843, 895, 1598
BtgZI	GCGATG	1 cut(s)	1506
BtrI	CACGTC	1 cut(s)	1349
BtsCI	GGATG	3 cut(s)	1386, 1792, 1951
BtsI	GCAGTG	3 cut(s)	732, 1311, 1404
BtsIMutI	CAGTG	5 cut(s)	732, 1042, 1311, 1404, 1823
BveI	ACCTGC	1 cut(s)	640
Cac8I	GCNNGC	3 cut(s)	458, 559, 841
CaiI	CAGNNNCTG	1 cut(s)	1825
CfoI	GCGC	3 cut(s)	399, 1080, 1149
Cfr10I	RCCGGY	3 cut(s)	228, 557, 1624
Cfr13I	GGNCC	6 cut(s)	263, 532, 597, 894, 1567, 1893
CseI	GACGC	2 cut(s)	566, 1078
Csp6I	GTAC	7 cut(s)	12, 194, 463, 824, 1373, 1899, 1959
CviAII	CATG	6 cut(s)	35, 59, 132, 375, 884, 1459
CviQI	GTAC	7 cut(s)	12, 194, 463, 824, 1373, 1899, 1959
DdeI	CTNAG	5 cut(s)	383, 1062, 1238, 1395, 1689
DpnI	GATC	9 cut(s)	39, 56, 587, 917, 1221, 1317, 1618, 1767, 2029
DpnII	GATC	9 cut(s)	37, 54, 585, 915, 1219, 1315, 1616, 1765, 2027
EaeI	YGGCCR	2 cut(s)	559, 841
Eam1104I	CTCTTC	2 cut(s)	443, 1192
EarI	CTCTTC	2 cut(s)	443, 1192
Eco130I	CCWWGG	1 cut(s)	1593
Eco47I	GGWCC	4 cut(s)	532, 597, 1567, 1893
Eco57I	CTGAAG	2 cut(s)	146, 629
Eco81I	CCTNAGG	1 cut(s)	1238
Eco88I	CYCGRG	1 cut(s)	1878
Eco91I	GGTNACC	1 cut(s)	975
EcoO109I	RGGNCCY	2 cut(s)	263, 1567
EcoO65I	GGTNACC	1 cut(s)	975
EcoRII	CCWGG	4 cut(s)	244, 561, 1522, 1543
EcoT14I	CCWWGG	1 cut(s)	1593
EcoT22I	ATGCAT	1 cut(s)	220
ErhI	CCWWGG	1 cut(s)	1593
FaeI	CATG	6 cut(s)	38, 62, 135, 378, 887, 1462
FalI	AAGNNNNNCTT	2 cut(s)	1647, 1679
FaqI	GGGAC	3 cut(s)	16, 832, 1580
FatI	CATG	6 cut(s)	34, 58, 131, 374, 883, 1458
Fnu4HI	GCNGC	8 cut(s)	87, 494, 738, 750, 753, 1181, 1440, 1659
FokI	GGATG	3 cut(s)	1393, 1799, 1958
Fsp4HI	GCNGC	8 cut(s)	87, 494, 738, 750, 753, 1181, 1440, 1659
FspBI	CTAG	4 cut(s)	170, 207, 1352, 1902
FspI	TGCGCA	1 cut(s)	1148
GlaI	GCGC	3 cut(s)	398, 1079, 1148
GluI	GCNGC	8 cut(s)	87, 494, 738, 750, 753, 1181, 1440, 1659
GsaI	CCCAGC	3 cut(s)	810, 1521, 1542
GsuI	CTGGAG	2 cut(s)	1229, 1934
HaeIII	GGCC	5 cut(s)	264, 561, 843, 895, 1598
HapII	CCGG	5 cut(s)	229, 558, 1003, 1625, 1896
HgaI	GACGC	2 cut(s)	566, 1078
HhaI	GCGC	3 cut(s)	399, 1080, 1149
Hin1II	CATG	6 cut(s)	38, 62, 135, 378, 887, 1462
Hin6I	GCGC	3 cut(s)	397, 1078, 1147
HinP1I	GCGC	3 cut(s)	397, 1078, 1147
HindIII	AAGCTT	1 cut(s)	63
HpaII	CCGG	5 cut(s)	229, 558, 1003, 1625, 1896
HphI	GGTGA	4 cut(s)	969, 1007, 1506, 1527
Hpy166II	GTNNAC	4 cut(s)	730, 1402, 1961, 1997
Hpy188III	TCNNGA	9 cut(s)	69, 919, 1109, 1208, 1223, 1264, 1574, 1880, 1966
Hpy8I	GTNNAC	4 cut(s)	730, 1402, 1961, 1997
HpyAV	CCTTC	6 cut(s)	254, 401, 418, 558, 1580, 1777
HpyCH4III	ACNGT	7 cut(s)	16, 610, 774, 823, 955, 1327, 1372
HpyCH4IV	ACGT	4 cut(s)	150, 1273, 1348, 1957
HpyCH4V	TGCA	8 cut(s)	218, 284, 365, 437, 522, 655, 1409, 1997
HpyF10VI	GCNNNNNNNGC	6 cut(s)	563, 722, 746, 1352, 1468, 1994
HpyF3I	CTNAG	5 cut(s)	383, 1062, 1238, 1395, 1689
HpySE526I	ACGT	4 cut(s)	150, 1273, 1348, 1957
Hsp92II	CATG	6 cut(s)	38, 62, 135, 378, 887, 1462
HspAI	GCGC	3 cut(s)	397, 1078, 1147
KroI	GCCGGC	1 cut(s)	557
KroNI	GCCGGC	1 cut(s)	559
Kzo9I	GATC	9 cut(s)	37, 54, 585, 915, 1219, 1315, 1616, 1765, 2027
LmnI	GCTCC	3 cut(s)	501, 506, 1848
Lsp1109I	GCAGC	7 cut(s)	73, 480, 724, 736, 739, 1192, 1451
LweI	GCATC	6 cut(s)	298, 424, 1089, 1345, 1371, 1997
MaeI	CTAG	4 cut(s)	170, 207, 1352, 1902
MaeII	ACGT	4 cut(s)	150, 1273, 1348, 1957
MaeIII	GTNAC	2 cut(s)	975, 1533
MalI	GATC	9 cut(s)	39, 56, 587, 917, 1221, 1317, 1618, 1767, 2029
MbiI	CCGCTC	1 cut(s)	504
MboI	GATC	9 cut(s)	37, 54, 585, 915, 1219, 1315, 1616, 1765, 2027
MflI	RGATCY	5 cut(s)	54, 915, 1219, 1315, 1765
MhlI	GDGCHC	3 cut(s)	1311, 1348, 1999
MluCI	AATT	6 cut(s)	342, 439, 659, 984, 1122, 1498
MlyI	GAGTC	4 cut(s)	106, 166, 1209, 1877
MmeI	TCCRAC	2 cut(s)	1695, 1923
Mph1103I	ATGCAT	1 cut(s)	220
MroNI	GCCGGC	1 cut(s)	557
MroXI	GAANNNNTTC	1 cut(s)	1011
MseI	TTAA	4 cut(s)	273, 570, 1125, 1296
MslI	CAYNNNNRTG	4 cut(s)	81, 208, 470, 1110
MspA1I	CMGCKG	1 cut(s)	350
MspI	CCGG	5 cut(s)	229, 558, 1003, 1625, 1896
MspR9I	CCNGG	5 cut(s)	246, 563, 1004, 1524, 1545
MvaI	CCWGG	4 cut(s)	246, 563, 1524, 1545
MwoI	GCNNNNNNNGC	6 cut(s)	563, 722, 746, 1352, 1468, 1994
NaeI	GCCGGC	1 cut(s)	559
NciI	CCSGG	1 cut(s)	1004
NdeII	GATC	9 cut(s)	37, 54, 585, 915, 1219, 1315, 1616, 1765, 2027
NgoMIV	GCCGGC	1 cut(s)	557
NlaIII	CATG	6 cut(s)	38, 62, 135, 378, 887, 1462
NlaIV	GGNNCC	6 cut(s)	534, 917, 1568, 1623, 1669, 1894
NmuCI	GTSAC	2 cut(s)	975, 1533
NsbI	TGCGCA	1 cut(s)	1148
NsiI	ATGCAT	1 cut(s)	220
NspI	RCATGY	1 cut(s)	1462
PaeR7I	CTCGAG	1 cut(s)	1878
PaqCI	CACCTGC	1 cut(s)	640
PasI	CCCWGGG	2 cut(s)	1523, 1544
PdiI	GCCGGC	1 cut(s)	559
PdmI	GAANNNNTTC	1 cut(s)	1011
PfeI	GAWTC	6 cut(s)	72, 358, 880, 1243, 1921, 2006
PflMI	CCANNNNNTGG	1 cut(s)	353
PkrI	GCNGC	8 cut(s)	88, 495, 739, 751, 754, 1182, 1441, 1660
PleI	GAGTC	4 cut(s)	106, 165, 1208, 1876
PpsI	GAGTC	4 cut(s)	106, 165, 1208, 1876
PpuMI	RGGWCCY	1 cut(s)	1567
PshBI	ATTAAT	1 cut(s)	1125
PsiI	TTATAA	1 cut(s)	1479
Psp5II	RGGWCCY	1 cut(s)	1567
Psp6I	CCWGG	4 cut(s)	244, 561, 1522, 1543
PspEI	GGTNACC	1 cut(s)	975
PspFI	CCCAGC	3 cut(s)	806, 1517, 1538
PspGI	CCWGG	4 cut(s)	244, 561, 1522, 1543
PspN4I	GGNNCC	6 cut(s)	534, 917, 1568, 1623, 1669, 1894
PspPI	GGNCC	6 cut(s)	263, 532, 597, 894, 1567, 1893
PspPPI	RGGWCCY	1 cut(s)	1567
PsrI	GAACNNNNNNTAC	2 cut(s)	1439, 1471
PstI	CTGCAG	2 cut(s)	286, 1411
PstNI	CAGNNNCTG	1 cut(s)	1825
PsuI	RGATCY	5 cut(s)	54, 915, 1219, 1315, 1765
RsaI	GTAC	7 cut(s)	13, 195, 464, 825, 1374, 1900, 1960
RsaNI	GTAC	7 cut(s)	12, 194, 463, 824, 1373, 1899, 1959
RseI	CAYNNNNRTG	4 cut(s)	81, 208, 470, 1110
SaqAI	TTAA	4 cut(s)	273, 570, 1125, 1296
SatI	GCNGC	8 cut(s)	87, 494, 738, 750, 753, 1181, 1440, 1659
Sau3AI	GATC	9 cut(s)	37, 54, 585, 915, 1219, 1315, 1616, 1765, 2027
Sau96I	GGNCC	6 cut(s)	263, 532, 597, 894, 1567, 1893
ScaI	AGTACT	1 cut(s)	825
SchI	GAGTC	4 cut(s)	106, 166, 1209, 1877
ScrFI	CCNGG	5 cut(s)	246, 563, 1004, 1524, 1545
SduI	GDGCHC	3 cut(s)	1311, 1348, 1999
SfaNI	GCATC	6 cut(s)	298, 424, 1089, 1345, 1371, 1997
SfcI	CTRYAG	2 cut(s)	282, 1407
Sfr274I	CTCGAG	1 cut(s)	1878
SinI	GGWCC	4 cut(s)	532, 597, 1567, 1893
SlaI	CTCGAG	1 cut(s)	1878
SmiMI	CAYNNNNRTG	4 cut(s)	81, 208, 470, 1110
SmlI	CTYRAG	2 cut(s)	178, 1878
SmoI	CTYRAG	2 cut(s)	178, 1878
SpeI	ACTAGT	1 cut(s)	1901
Sse9I	AATT	6 cut(s)	342, 439, 659, 984, 1122, 1498
SsiI	CCGC	4 cut(s)	350, 504, 1450, 1658
SspI	AATATT	2 cut(s)	291, 1045
SspMI	CTAG	4 cut(s)	170, 207, 1352, 1902
StyD4I	CCNGG	5 cut(s)	244, 561, 1002, 1522, 1543
StyI	CCWWGG	1 cut(s)	1593
TaaI	ACNGT	7 cut(s)	16, 610, 774, 823, 955, 1327, 1372
TaiI	ACGT	4 cut(s)	153, 1276, 1351, 1960
TaqI	TCGA	3 cut(s)	1176, 1871, 1879
TaqII	GACCGA	1 cut(s)	585
TasI	AATT	6 cut(s)	342, 439, 659, 984, 1122, 1498
TatI	WGTACW	3 cut(s)	462, 823, 1372
TauI	GCSGC	1 cut(s)	1661
TfiI	GAWTC	6 cut(s)	72, 358, 880, 1243, 1921, 2006
Tru1I	TTAA	4 cut(s)	273, 570, 1125, 1296
Tru9I	TTAA	4 cut(s)	273, 570, 1125, 1296
TscAI	CASTG	5 cut(s)	739, 1042, 1311, 1411, 1830
TseFI	GTSAC	2 cut(s)	975, 1533
TseI	GCWGC	7 cut(s)	86, 493, 737, 749, 752, 1180, 1439
Tsp45I	GTSAC	2 cut(s)	975, 1533
TspGWI	ACGGA	1 cut(s)	1629
TspRI	CASTG	5 cut(s)	739, 1042, 1311, 1411, 1830
Van91I	CCANNNNNTGG	1 cut(s)	353
VneI	GTGCAC	1 cut(s)	1995
VpaK11BI	GGWCC	4 cut(s)	532, 597, 1567, 1893
VspI	ATTAAT	1 cut(s)	1125
XapI	RAATTY	2 cut(s)	439, 659
XceI	RCATGY	1 cut(s)	1462
XcmI	CCANNNNNNNNNTGG	1 cut(s)	65
XhoI	CTCGAG	1 cut(s)	1878
XmnI	GAANNNNTTC	1 cut(s)	1011
XspI	CTAG	4 cut(s)	170, 207, 1352, 1902
ZrmI	AGTACT	1 cut(s)	825
Zsp2I	ATGCAT	1 cut(s)	220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.