Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004423

Physical Location & Seq

Genomic Coordinates Reverse (-)

22142604 .. 22149527

Gene Structure 6924 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G60070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

ATGAATCCATTCTCTTCCGGCACGCGTCTCAGCGACATGATTCGAGCTATACGTGCGAGTAAAACCGCTGCTGAGGAACGTGCTGTTGTGAGGAAAGAATGTGCTGCGATCCGTGCTTCGATTAATGAAAATGACCAGGACTATAGACATCGGGATCTAGCGAAGCTTATGTTCATTCATATGCTTGGTTACCCTACTCATTTTGGGCAAATGGAATGCTTGAAGTTAATTGCTTCTCCTGGATTTCCTGAGAAGAGGATTGGTTATCTTGGATTAATGTTGCTTCTTGATGAAAGGCAAGAAGTATTAATGCTTGTCACCAACTCGCTGAAGCAAGATCTGAATCACACGAACCAGTACATTGTGGGGCTTGCTCTCTGTGCTTTAGGAAATATTTGTTCAGCAGAAATGGCTCGTGATCTCGCCCCTGAAGTTGAACGATTACTTCAGTTTCGTGATCCAAATATACGCAAGAAAGCAGCTCTTTGCGCGATAAGGATCATCAGAAAAGTTCCGGATCTTTCTGAGAACTTTATTAATCCTGGTGCTGCTTTACTCAAAGAAAAGCATCATGGTGTTCTCATTACGGGAGTTCACCTTTGCACAGAAATCTGTAAAGTCAGTTCCGAAGCCCTTGAATATTTCCGGAAGAAATGCACAGAGGGCTTGGTTAAAACCCTGAGAGATATTGCAAACAGTCCATATTCACCTGAGTATGACGTCGCTGGAATTACGGATCCATTCCTTCACATCAGATTGCTCAAACTGTTGCGTGTTTTGGGCCAAGGGGATGCAGATGCCAGTGACTGTATGAATGATATACTTGCTCAGGTGGCATCAAAAACCGAGTCAAACAAAAATGCAGGGAATGCTATCCTATACGAATGCGTTCAAACGATAATGAGCATCGAAGAAAATGGTGGCCTACGAGTCCTTGCAATCAATATCTTAGGAAAATTCTTGTCCAACCGAGATAATAACATCAGATACGTAGCATTAAACATGCTGATGAGATCCTTAACTGTTGATTCCCAAGCGGTTCAAAGACACAGAGCTACAATCCTGGAGTGTGTTAAGGATTCAGATGCTTCAATTCAGAAAAGGGCACTTGAGCTTATTTACCTTCTAGTGAATGAGAATAACGTGAAGCCACTAGCAAAGGAGCTTATAGAATATTTGGAAGTAAGCGAACAAGATTTTAAAGGAGATCTTACTGCAAAGATATGCTCCATAGTTGAAAAGTTTGCTCCAGAGAAAATCTGGTACATTGATCAAATGCTAAAGGTTCTATCTGAGGCTGGAACTTATGTGAAAGAGGATGTATGGCACGCGCTGATTGTTGTAATAACAAATGCCCCTGATCTCCATGGGTACACTGTCAGGGCTTTGTATAGAGCATTACATACATCTTTTGAACAGGAAACTCTTGTGCGCGTTGCAATATGGTGCATAGGAGAATATGCTGATCTGTTGGTTAACAATGCTGGAATGCTTGACTTAGAAGATCCAATAACGGTAACAGAATCAGATGCAGTGGATGTTGTCGAGAATGCTATTAAGCATCATTTATCAGATGTCACAACTAAGGCAATGGCACTCATTGCTCTGTTAAAGATCTCATCTCGTTTCCCATCCTGTTCAGAGAGAGTTAAAAGTATTATAGGACAGAACAAAGGTAGCTTTGTCTTAGAACTTCAACAAAGATCCCTGGAGTTCAGTTCAGTTATTCAAAAGCATCAGAATATAAGATCTTCTCTGGTTGAAAGAATGCCGGTCCTTGATGAGGCAACATTTAGTGGAAGGAGAGCTGGTTCTTTACCAGCATCTGTGTCAACTTCTGGAAAATCTCCGCTTGGTATTCCAAACGGTGTTGCTAAAGCAGCAGCTCCTCTTGTTGATTTACTCGATCTGGGCTCTGATGATACTCCTGCGCCTACCTCCTCCAGTAACAACTTTCTTCAAGATCTTCTTGGTGTTGATTTATCGCAGCCTTCAGCACAACCTGGTGCCATGCAGCCATCGCAAGCTGGTGCGGATATTCTTATGGATCTGTTGTCAATCGGAACTCCTGCCCCTGTGCAAAATGGCTCGGCGAATGGAGACTTATTATCTATTCAAGATAACAATGCTCCAATAGCGCCTTCTTTGACTTCTCCCACTGCGCCTTCTTCGATGATGGATTTATTGGATGGATTTGGTCCCACCCCACCAAAGAGCGAGGACAAGAGTGCAGCATATCCGTCCATTGTTGCATTTGAAAGCAGCTCCTTGAAGATTGAGTTCAACTTCACAAAGCAATCAGAAAATCCTCAAACGACAGACATTGTGGCCAATTTCATAAATCTTACTCCTAACGTGTACACAGAATTTCTTTTCCAGGCTGCAGTTCCAAAGTTTCTACAACTTCACCTGGATCCCGCTAGCAGCAATTCTCTTCCAGCTAACGGAAACATCAAACAAACTATGAGAGTTACAAATAGCCAAAAGGGGAAGAAACCCATTGTGATGCGGATGAGGGTAGGTTACAAGATTAATGGCAAAGATGTGTTGGAGGAAGGACAAATCAACAATTTCCCACGTGGGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0006810 GO:0008150 GO:0012505 GO:0012506 GO:0012510 GO:0016020 GO:0016192 GO:0030117 GO:0030118 GO:0030119 GO:0030120 GO:0030121 GO:0030125 GO:0030130 GO:0030131 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0048475 GO:0051179 GO:0051234 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

Adaptin_N Alpha_adaptinC2

Protein Analysis

862

Amino Acids

94.67

Weight (kDa)

5.97

Isoelectric Point (pI)

40.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Adaptin_N	PF01602	26 - 579	2.4e-151	Adaptin N terminal region
Alpha_adaptinC2	PF02883	748 - 859	3.6e-31	Adaptin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004423)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23900 AT1G23900 AT1G23900 AT1G60070 AT1G60070
fragaria_vesca	FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830
malus_domestica	MD13G1089300.v1.1 MD16G1089500.v1.1
prunus_persica	Prupe.1G256500_v2.0.a1
pyrus_communis	pycom13g07770 pycom16g07660
rosa_chinensis	RchiOBHm_Chr4g0444171
rosa_laevigata	RLG00000005850
rosa_multiflora	Rmu_sc0034408.1_g000001 Rmu_ssc0000462.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384760
rosa_rugosa	Rorug04G0350700 Rorug04G0350700
rosa_samantha	Rh4AG411400 Rh4BG422800 Rh4CG154500 Rh4CG437100 Rh4DG418100
rosa_wichuraiana	Rw4G035340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	723
AccB1I	GGYRCC	1 cut(s)	2006
AccII	CGCG	4 cut(s)	25, 491, 1331, 1434
AccIII	TCCGGA	2 cut(s)	514, 645
AciI	CCGC	6 cut(s)	66, 1037, 1850, 2033, 2418, 2509
AcoI	YGGCCR	1 cut(s)	2328
AcsI	RAATTY	2 cut(s)	956, 2366
AcuI	CTGAAG	4 cut(s)	350, 431, 450, 1977
AcvI	CACGTG	1 cut(s)	2579
AcyI	GRCGYC	1 cut(s)	720
AfaI	GTAC	4 cut(s)	359, 1265, 1373, 2360
AfiI	CCNNNNNNNGG	2 cut(s)	1783, 2444
AflIII	ACRYGT	2 cut(s)	23, 2355
AjnI	CCWGG	8 cut(s)	135, 238, 541, 1062, 1707, 2002, 2376, 2409
AjuI	GAANNNNNNNTTGG	2 cut(s)	2125, 2157
AloI	GAACNNNNNNTCC	2 cut(s)	1795, 1827
Alw26I	GTCTC	2 cut(s)	32, 2094
AlwNI	CAGNNNCTG	2 cut(s)	807, 1826
Aor13HI	TCCGGA	2 cut(s)	514, 645
AoxI	GGCC	3 cut(s)	781, 922, 2328
ApoI	RAATTY	2 cut(s)	956, 2366
ArsI	GACNNNNNNTTYG	2 cut(s)	833, 865
AseI	ATTAAT	5 cut(s)	123, 275, 308, 537, 2532
Asp700I	GAANNNNTTC	2 cut(s)	8, 888
AspLEI	GCGC	6 cut(s)	491, 1333, 1434, 1933, 2140, 2164
AspS9I	GGNCC	3 cut(s)	781, 1774, 2198
AsuHPI	GGTGA	4 cut(s)	310, 587, 699, 2399
AsuNHI	GCTAGC	1 cut(s)	2420
AvaII	GGWCC	2 cut(s)	1774, 2198
BaeGI	GKGCMC	1 cut(s)	1108
BalI	TGGCCA	1 cut(s)	2330
BamHI	GGATCC	2 cut(s)	736, 2413
BanI	GGYRCC	1 cut(s)	2006
BanII	GRGCYC	1 cut(s)	1916
BauI	CACGAG	1 cut(s)	414
BbrPI	CACGTG	1 cut(s)	2579
BbvCI	CCTCAGC	1 cut(s)	72
BccI	CCATC	4 cut(s)	1639, 2026, 2170, 2183
BciT130I	CCWGG	8 cut(s)	137, 240, 543, 1064, 1709, 2004, 2378, 2411
BclI	TGATCA	1 cut(s)	1270
BcoDI	GTCTC	2 cut(s)	32, 2094
BfaI	CTAG	4 cut(s)	158, 1127, 1154, 2421
BfmI	CTRYAG	2 cut(s)	142, 2382
BfoI	RGCGCY	1 cut(s)	2141
BglII	AGATCT	5 cut(s)	337, 1207, 1614, 1748, 1963
Bme1390I	CCNGG	8 cut(s)	137, 240, 543, 1064, 1709, 2004, 2378, 2411
Bme18I	GGWCC	2 cut(s)	1774, 2198
BmgT120I	GGNCC	3 cut(s)	781, 1774, 2198
BmiI	GGNNCC	4 cut(s)	738, 2008, 2200, 2415
BmrFI	CCNGG	8 cut(s)	137, 240, 543, 1064, 1709, 2004, 2378, 2411
BmtI	GCTAGC	1 cut(s)	2424
BpmI	CTGGAG	4 cut(s)	1085, 1233, 1730, 1927
Bpu10I	CCTNAGC	2 cut(s)	72, 828
BpuEI	CTTGAG	1 cut(s)	1130
BsaAI	YACGTR	3 cut(s)	53, 991, 2579
BsaBI	GATNNNNATC	2 cut(s)	342, 497
BsaHI	GRCGYC	1 cut(s)	720
BsaJI	CCNNGG	3 cut(s)	784, 1366, 1707
BsaWI	WCCGGW	2 cut(s)	514, 645
BsaXI	ACNNNNNCTCC	2 cut(s)	1795, 1825
Bsc4I	CCNNNNNNNGG	2 cut(s)	1783, 2444
Bse118I	RCCGGY	1 cut(s)	1771
Bse1I	ACTGG	3 cut(s)	355, 801, 1944
Bse3DI	GCAATG	2 cut(s)	1596, 1599
Bse8I	GATNNNNATC	2 cut(s)	342, 497
BseAI	TCCGGA	2 cut(s)	514, 645
BseBI	CCWGG	8 cut(s)	137, 240, 543, 1064, 1709, 2004, 2378, 2411
BseDI	CCNNGG	3 cut(s)	784, 1366, 1707
BseGI	GGATG	6 cut(s)	796, 1324, 1543, 1631, 2194, 2517
BseJI	GATNNNNATC	2 cut(s)	342, 497
BseLI	CCNNNNNNNGG	2 cut(s)	1783, 2444
BseMI	GCAATG	2 cut(s)	1596, 1599
BseMII	CTCAG	8 cut(s)	43, 63, 240, 516, 671, 702, 842, 1284
BseNI	ACTGG	3 cut(s)	355, 801, 1944
BseRI	GAGGAG	2 cut(s)	1878, 1930
BseSI	GKGCMC	1 cut(s)	1108
BsgI	GTGCAG	1 cut(s)	2250
Bsh1236I	CGCG	4 cut(s)	25, 491, 1331, 1434
BshFI	GGCC	3 cut(s)	783, 924, 2330
BshNI	GGYRCC	1 cut(s)	2006
BsiSI	CCGG	4 cut(s)	18, 515, 646, 1772
BslFI	GGGAC	1 cut(s)	2184
BslI	CCNNNNNNNGG	2 cut(s)	1783, 2444
BsmAI	GTCTC	2 cut(s)	32, 2094
BsmBI	CGTCTC	1 cut(s)	32
BsmFI	GGGAC	1 cut(s)	2184
BsmI	GAATGC	6 cut(s)	221, 874, 890, 1494, 1555, 1773
BsnI	GGCC	3 cut(s)	783, 924, 2330
Bsp1286I	GDGCHC	2 cut(s)	1108, 1916
Bsp13I	TCCGGA	2 cut(s)	514, 645
Bsp1407I	TGTACA	1 cut(s)	2358
Bsp19I	CCATGG	1 cut(s)	1366
BspACI	CCGC	6 cut(s)	66, 1037, 1850, 2033, 2418, 2509
BspANI	GGCC	3 cut(s)	783, 924, 2330
BspCNI	CTCAG	8 cut(s)	42, 64, 241, 517, 672, 703, 841, 1285
BspEI	TCCGGA	2 cut(s)	514, 645
BspFNI	CGCG	4 cut(s)	25, 491, 1331, 1434
BspLI	GGNNCC	4 cut(s)	738, 2008, 2200, 2415
BspMAI	CTGCAG	1 cut(s)	2386
BspOI	GCTAGC	1 cut(s)	2424
BspT107I	GGYRCC	1 cut(s)	2006
BsrDI	GCAATG	2 cut(s)	1596, 1599
BsrFI	RCCGGY	1 cut(s)	1771
BsrGI	TGTACA	1 cut(s)	2358
BsrI	ACTGG	3 cut(s)	355, 801, 1944
BssAI	RCCGGY	1 cut(s)	1771
BssECI	CCNNGG	3 cut(s)	784, 1366, 1707
BssNI	GRCGYC	1 cut(s)	720
BssSI	CACGAG	1 cut(s)	414
BssT1I	CCWWGG	2 cut(s)	784, 1366
Bst2BI	CACGAG	1 cut(s)	414
Bst2UI	CCWGG	8 cut(s)	137, 240, 543, 1064, 1709, 2004, 2378, 2411
Bst4CI	ACNGT	7 cut(s)	698, 768, 809, 1024, 1378, 1516, 1868
Bst6I	CTCTTC	3 cut(s)	19, 248, 2439
BstACI	GRCGYC	1 cut(s)	720
BstAPI	GCANNNNNTGC	2 cut(s)	869, 1601
BstAUI	TGTACA	1 cut(s)	2358
BstBAI	YACGTR	3 cut(s)	53, 991, 2579
BstC8I	GCNNGC	5 cut(s)	23, 372, 1329, 2025, 2422
BstDSI	CCRYGG	1 cut(s)	1366
BstEII	GGTNACC	1 cut(s)	188
BstENI	CCTNNNNNAGG	1 cut(s)	1781
BstF5I	GGATG	6 cut(s)	796, 1324, 1543, 1631, 2194, 2517
BstFNI	CGCG	4 cut(s)	25, 491, 1331, 1434
BstH2I	RGCGCY	1 cut(s)	2141
BstHHI	GCGC	6 cut(s)	491, 1333, 1434, 1933, 2140, 2164
BstMAI	GTCTC	2 cut(s)	32, 2094
BstNI	CCWGG	8 cut(s)	137, 240, 543, 1064, 1709, 2004, 2378, 2411
BstNSI	RCATGY	1 cut(s)	1006
BstPI	GGTNACC	1 cut(s)	188
BstSCI	CCNGG	8 cut(s)	135, 238, 541, 1062, 1707, 2002, 2376, 2409
BstSFI	CTRYAG	2 cut(s)	142, 2382
BstSLI	GKGCMC	1 cut(s)	1108
BstSNI	TACGTA	1 cut(s)	991
BstUI	CGCG	4 cut(s)	25, 491, 1331, 1434
BsuRI	GGCC	3 cut(s)	783, 924, 2330
BtgI	CCRYGG	1 cut(s)	1366
BtgZI	GCGATG	1 cut(s)	2004
BtsCI	GGATG	6 cut(s)	796, 1324, 1543, 1631, 2194, 2517
BtsI	GCAGTG	2 cut(s)	1539, 2157
BtsIMutI	CAGTG	4 cut(s)	808, 1374, 1539, 2157
Cac8I	GCNNGC	5 cut(s)	23, 372, 1329, 2025, 2422
CaiI	CAGNNNCTG	2 cut(s)	807, 1826
CfoI	GCGC	6 cut(s)	491, 1333, 1434, 1933, 2140, 2164
Cfr10I	RCCGGY	1 cut(s)	1771
Cfr13I	GGNCC	3 cut(s)	781, 1774, 2198
CseI	GACGC	1 cut(s)	14
CsiI	ACCWGGT	1 cut(s)	2002
Csp6I	GTAC	4 cut(s)	358, 1264, 1372, 2359
CviAII	CATG	5 cut(s)	37, 572, 1003, 1367, 2011
CviQI	GTAC	4 cut(s)	358, 1264, 1372, 2359
DraI	TTTAAA	1 cut(s)	1201
EaeI	YGGCCR	1 cut(s)	2328
Eam1104I	CTCTTC	3 cut(s)	19, 248, 2439
EarI	CTCTTC	3 cut(s)	19, 248, 2439
Eco105I	TACGTA	1 cut(s)	991
Eco130I	CCWWGG	2 cut(s)	784, 1366
Eco24I	GRGCYC	1 cut(s)	1916
Eco47I	GGWCC	2 cut(s)	1774, 2198
Eco57I	CTGAAG	4 cut(s)	350, 431, 450, 1977
Eco72I	CACGTG	1 cut(s)	2579
Eco91I	GGTNACC	1 cut(s)	188
EcoNI	CCTNNNNNAGG	1 cut(s)	1781
EcoO65I	GGTNACC	1 cut(s)	188
EcoRII	CCWGG	8 cut(s)	135, 238, 541, 1062, 1707, 2002, 2376, 2409
EcoT14I	CCWWGG	2 cut(s)	784, 1366
EcoT38I	GRGCYC	1 cut(s)	1916
ErhI	CCWWGG	2 cut(s)	784, 1366
Esp3I	CGTCTC	1 cut(s)	32
FaeI	CATG	5 cut(s)	40, 575, 1006, 1370, 2014
FalI	AAGNNNNNCTT	6 cut(s)	468, 500, 1194, 1226, 1953, 1985
FaqI	GGGAC	1 cut(s)	2184
FatI	CATG	5 cut(s)	36, 571, 1002, 1366, 2010
FauI	CCCGC	1 cut(s)	2425
FauNDI	CATATG	1 cut(s)	180
FbaI	TGATCA	1 cut(s)	1270
FokI	GGATG	6 cut(s)	803, 1331, 1550, 1618, 2201, 2524
FriOI	GRGCYC	1 cut(s)	1916
FspBI	CTAG	4 cut(s)	158, 1127, 1154, 2421
GlaI	GCGC	6 cut(s)	490, 1332, 1433, 1932, 2139, 2163
GsuI	CTGGAG	4 cut(s)	1085, 1233, 1730, 1927
HaeII	RGCGCY	1 cut(s)	2141
HaeIII	GGCC	3 cut(s)	783, 924, 2330
HapII	CCGG	4 cut(s)	18, 515, 646, 1772
HgaI	GACGC	1 cut(s)	14
HhaI	GCGC	6 cut(s)	491, 1333, 1434, 1933, 2140, 2164
Hin1I	GRCGYC	1 cut(s)	720
Hin1II	CATG	5 cut(s)	40, 575, 1006, 1370, 2014
Hin6I	GCGC	6 cut(s)	489, 1331, 1432, 1931, 2138, 2162
HinP1I	GCGC	6 cut(s)	489, 1331, 1432, 1931, 2138, 2162
HincII	GTYRAC	2 cut(s)	1477, 1833
HindII	GTYRAC	2 cut(s)	1477, 1833
HindIII	AAGCTT	1 cut(s)	164
HinfI	GANTC	8 cut(s)	4, 40, 343, 848, 930, 1028, 1079, 1523
HpaI	GTTAAC	1 cut(s)	1477
HpaII	CCGG	4 cut(s)	18, 515, 646, 1772
HphI	GGTGA	4 cut(s)	310, 587, 699, 2399
Hpy166II	GTNNAC	6 cut(s)	595, 1374, 1477, 1833, 2359, 2361
Hpy8I	GTNNAC	6 cut(s)	595, 1374, 1477, 1833, 2359, 2361
Hpy99I	CGWCG	1 cut(s)	725
HpyAV	CCTTC	7 cut(s)	755, 1133, 1794, 2001, 2151, 2175, 2549
HpyCH4III	ACNGT	7 cut(s)	698, 768, 809, 1024, 1378, 1516, 1868
HpyCH4IV	ACGT	7 cut(s)	52, 79, 720, 990, 1143, 2355, 2578
HpySE526I	ACGT	7 cut(s)	52, 79, 720, 990, 1143, 2355, 2578
Hsp92I	GRCGYC	1 cut(s)	720
Hsp92II	CATG	5 cut(s)	40, 575, 1006, 1370, 2014
HspAI	GCGC	6 cut(s)	489, 1331, 1432, 1931, 2138, 2162
Kpn2I	TCCGGA	2 cut(s)	514, 645
Ksp22I	TGATCA	1 cut(s)	1270
KspAI	GTTAAC	1 cut(s)	1477
LmnI	GCTCC	6 cut(s)	1162, 1232, 1252, 1891, 2134, 2270
MabI	ACCWGGT	1 cut(s)	2002
MaeI	CTAG	4 cut(s)	158, 1127, 1154, 2421
MaeII	ACGT	7 cut(s)	52, 79, 720, 990, 1143, 2355, 2578
MaeIII	GTNAC	8 cut(s)	188, 316, 803, 1516, 1576, 1946, 2470, 2522
MhlI	GDGCHC	2 cut(s)	1108, 1916
MlsI	TGGCCA	1 cut(s)	2330
MluCI	AATT	8 cut(s)	228, 729, 956, 1092, 2332, 2366, 2428, 2569
MluI	ACGCGT	1 cut(s)	23
MluNI	TGGCCA	1 cut(s)	2330
MlyI	GAGTC	2 cut(s)	857, 939
MmeI	TCCRAC	2 cut(s)	990, 2529
Mox20I	TGGCCA	1 cut(s)	2330
MroI	TCCGGA	2 cut(s)	514, 645
MroXI	GAANNNNTTC	2 cut(s)	8, 888
MscI	TGGCCA	1 cut(s)	2330
MslI	CAYNNNNRTG	4 cut(s)	179, 573, 1007, 2504
Msp20I	TGGCCA	1 cut(s)	2330
MspA1I	CMGCKG	1 cut(s)	68
MspI	CCGG	4 cut(s)	18, 515, 646, 1772
MspR9I	CCNGG	8 cut(s)	137, 240, 543, 1064, 1709, 2004, 2378, 2411
Mva1269I	GAATGC	6 cut(s)	221, 874, 890, 1494, 1555, 1773
MvaI	CCWGG	8 cut(s)	137, 240, 543, 1064, 1709, 2004, 2378, 2411
MvnI	CGCG	4 cut(s)	25, 491, 1331, 1434
NcoI	CCATGG	1 cut(s)	1366
NdeI	CATATG	1 cut(s)	180
NheI	GCTAGC	1 cut(s)	2420
NlaIII	CATG	5 cut(s)	40, 575, 1006, 1370, 2014
NlaIV	GGNNCC	4 cut(s)	738, 2008, 2200, 2415
NmeAIII	GCCGAG	1 cut(s)	2069
NmuCI	GTSAC	3 cut(s)	316, 803, 1576
NspI	RCATGY	1 cut(s)	1006
PcsI	WCGNNNNNNNCGW	1 cut(s)	49
PctI	GAATGC	6 cut(s)	221, 874, 890, 1494, 1555, 1773
PdmI	GAANNNNTTC	2 cut(s)	8, 888
PfeI	GAWTC	6 cut(s)	4, 40, 343, 1028, 1079, 1523
PfoI	TCCNGGA	2 cut(s)	238, 1062
PleI	GAGTC	2 cut(s)	856, 938
PmaCI	CACGTG	1 cut(s)	2579
PmlI	CACGTG	1 cut(s)	2579
PpsI	GAGTC	2 cut(s)	856, 938
Ppu21I	YACGTR	3 cut(s)	53, 991, 2579
PshBI	ATTAAT	5 cut(s)	123, 275, 308, 537, 2532
Psp6I	CCWGG	8 cut(s)	135, 238, 541, 1062, 1707, 2002, 2376, 2409
PspCI	CACGTG	1 cut(s)	2579
PspEI	GGTNACC	1 cut(s)	188
PspGI	CCWGG	8 cut(s)	135, 238, 541, 1062, 1707, 2002, 2376, 2409
PspN4I	GGNNCC	4 cut(s)	738, 2008, 2200, 2415
PspPI	GGNCC	3 cut(s)	781, 1774, 2198
PsrI	GAACNNNNNNTAC	2 cut(s)	607, 639
PstI	CTGCAG	1 cut(s)	2386
PstNI	CAGNNNCTG	2 cut(s)	807, 1826
RsaI	GTAC	4 cut(s)	359, 1265, 1373, 2360
RsaNI	GTAC	4 cut(s)	358, 1264, 1372, 2359
RseI	CAYNNNNRTG	4 cut(s)	179, 573, 1007, 2504
Sau96I	GGNCC	3 cut(s)	781, 1774, 2198
SchI	GAGTC	2 cut(s)	857, 939
ScrFI	CCNGG	8 cut(s)	137, 240, 543, 1064, 1709, 2004, 2378, 2411
SduI	GDGCHC	2 cut(s)	1108, 1916
SexAI	ACCWGGT	1 cut(s)	2002
SfcI	CTRYAG	2 cut(s)	142, 2382
SinI	GGWCC	2 cut(s)	1774, 2198
SmiMI	CAYNNNNRTG	4 cut(s)	179, 573, 1007, 2504
SmlI	CTYRAG	1 cut(s)	1109
SmoI	CTYRAG	1 cut(s)	1109
SnaBI	TACGTA	1 cut(s)	991
Sse9I	AATT	8 cut(s)	228, 729, 956, 1092, 2332, 2366, 2428, 2569
SsiI	CCGC	6 cut(s)	66, 1037, 1850, 2033, 2418, 2509
SspI	AATATT	3 cut(s)	394, 641, 1175
SspMI	CTAG	4 cut(s)	158, 1127, 1154, 2421
StyD4I	CCNGG	8 cut(s)	135, 238, 541, 1062, 1707, 2002, 2376, 2409
StyI	CCWWGG	2 cut(s)	784, 1366
TaaI	ACNGT	7 cut(s)	698, 768, 809, 1024, 1378, 1516, 1868
TaiI	ACGT	7 cut(s)	55, 82, 723, 993, 1146, 2358, 2581
TaqI	TCGA	6 cut(s)	43, 119, 909, 1545, 1905, 2171
TasI	AATT	8 cut(s)	228, 729, 956, 1092, 2332, 2366, 2428, 2569
TatI	WGTACW	2 cut(s)	357, 2358
TfiI	GAWTC	6 cut(s)	4, 40, 343, 1028, 1079, 1523
TscAI	CASTG	4 cut(s)	808, 1381, 1539, 2164
TseFI	GTSAC	3 cut(s)	316, 803, 1576
Tsp45I	GTSAC	3 cut(s)	316, 803, 1576
TspDTI	ATGAA	7 cut(s)	17, 141, 163, 167, 306, 827, 2326
TspGWI	ACGGA	4 cut(s)	101, 749, 2229, 2460
TspRI	CASTG	4 cut(s)	808, 1381, 1539, 2164
VpaK11BI	GGWCC	2 cut(s)	1774, 2198
VspI	ATTAAT	5 cut(s)	123, 275, 308, 537, 2532
XagI	CCTNNNNNAGG	1 cut(s)	1781
XapI	RAATTY	2 cut(s)	956, 2366
XceI	RCATGY	1 cut(s)	1006
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1257
XmnI	GAANNNNTTC	2 cut(s)	8, 888
XspI	CTAG	4 cut(s)	158, 1127, 1154, 2421
ZraI	GACGTC	1 cut(s)	721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.