Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004423

Physical Location & Seq

Genomic Coordinates Forward (+)

65001017 .. 65012245

Gene Structure 11229 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41187

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGAATCCCTTCTCTTCCGGAACGCGCCTGAGGGACATGATTCGGGCTATACGTGCTTGCAAAACTGCAGCTGAGGAACGTGGTGTTGTAAGAAAAGAGTGTGCTGCTATTCGTGCTGCCATAAATGAAAATGATAATGACTACAGGCACCGTAACCTGGCTAAGCTCATGTTCATCCACATGCTGGGATACCCTACACATTTTGGTCAAATGGAGTGCCTGAAGTTGATCGCGTCTGCTGGTTTTCCTGAGAAGAGAATAGGGTATCTTGGCCTCATGCTGCTTCTCGATGAAAGACAAGAAGTTCTGATGTTGGTCACAAACTCGTTGAAACAAGATCTGAATCACTCAAACCAGTATATTGTCGGACTTGCTCTTTGTGCTATGGGAAATATTTGTTCAGCAGAGATGGCTCGTGATCTTGCACCAGAAGTAGAGAGATTGCTACAATTTCGAGATCCCAATATCCGGAAAAAGGCAGCATTGTGCTCCATCAGGATTATAAAGAAAGTCCCTGAACTGGCGGAAAATTTTATTAATCCTGCTGCTGCCTTACTTAGAGAAAAGCATCATGGCGTTTTAATCACAGGAGTTCAACTTTGTACAGAGCTTTGTAAAGCCAGTGAAGAAGCGCTCGAATACTTTAGAATGAAGTGCACAGAGGGTTTGGTCAAGACACTAAAGGATCTAGTGAACAGCCCATATGCTCCTGAGTACGACATTGCTGGGATCACGGATCCTTTCCTCCATATTAGATTGCTAAAGCTTTTGCGTGTGTTGGGTCAAGGAGATGAGGATGCTAGTGAATGTATGAATGACATACTTGCCCAGGTGGCTACCAAAACTGAGTCAAACAAAAATGCAGGGAATGCAATTCTATACGAATGTGTAGCAACTATAATGAGCATCGAAGACAATGGTGGCTTACGTGTGCTTGCCATCAATATTTTGGGAAGATTTTTATCGAATCGTGACAATAATATCAGATATGTTGCGTTAAACATGCTGATGAGAGCCATTACAGTTGATGCTCAAGCTGTACAGAGGCATCGGGCAACTATCTTGGAATGTGTAAAGGATTTAGATGCTTCAATTCGTAAAAGGGCCCTTGAACTTGTTTATGTTCTTGTGAATGAAAGTAACGTGAAACCTCTAACAAAAGAGCTCATTGACTATTTGGAAGTAAGTGATCAAGATTTCAAGGGAGATCTTACAGCAAAAATTTGCTCCCTTGTCAAGAAGTTTTCCCCTGAGAAGATTTGGTACATTGATCAGATGCTGAAGGTTCTCTCTGAGGCTGGAAATTTTGTAAAAGATGAAGTATGGCACGCAGTTATTGTTGTGATAACCAATTCACCTGATCTTCATGGGTATGCGGTTAGGGCTTTATACAGAGCACTCCAAACATCAGCTGATCAGGAAACTTTGGTTCGAGTAGCAGTTTGGTGCATCGGAGAATATGGTGACATGTTGGTAAATAATATTGGCATGCTTGATGTAGAGGATCCCATAACGGTAACAGAGAGTGATGCTGTGGATATCATAGAAATTGCCCTTAAGCACCATACCTCGGATCTTACTACCAAAGCTATGGCTTTGATTGCTCTCTTAAAGCTATCTTCACGTTTCCCATCTTGTTCAGAGAGGATCAAAGAAATCGTAGTTCAGTACAAAGGAAGCCTTGTGCTTGAATTGCAGCAAAGATCCATTGAATTGAATTCTATTATTGCGAAGCATCAGAACATTAGATCTACACTGGTTGAGAGGATGCCAACTTTGGATTTGTTAGAGTGGGAGGAAAAGCAGAGTGGTTCTATACCAAATACTACTGGTTCAACTCCTGCTCATGCTTCAATCAACATACCAAATGGAGTTGCCAAACCTTCTTCAGCTCCTCTTGTGGATTTACTTGATCTAAATTCAGATGATGTGCCAGCACCTAGCTCCTCTGGTGGTGATTCTTTTCATGGTCTTCTCGATATTGATTTGTCAGGAGCTCCTAAACAATCGGGTGTAAATCATTCTCCAAACAATGGCACTGATGCTCTAATGGATCTCTTGTCTACTGCTACACCTACACAAAGCCGCTCAGCTATCTCTGATCTGTTAAACTCTGGTCAAGATAACAAAACACCTGTTTCACCATTAGAGGTACTATCATCTCCATCTTCGAACTCCATACAACCCACTTCTTCTGCTGGAGCTATAGATTTGCTGGACAGCTTTGCCACCAACTCACCAATACAAGAAAACAATGGCCCTGCGTATCCATCTGTAGTGGCATTTGAGAGCAGCAATTTAAGGATAGGGTTTAACTTCTCGAAGCTGCCTGGAAATCCACAAACAACAATAATCAAGGCTACATTCACTAATTTGTCACCTAGCGTCTATACAGATTTTATTTTTCAGGCAGCTGTTCCAAAGTTCCTGCAACTGCACTTAGAGCCAGCTAGCGGCAATACTCTTCCGGCAAGTGGTAATGAGTCCATCACACAGACTTTGAGAGTTACCAATAGCCAACATGGAAAGAAAAGTCTTGTCATGCGCATAAGGATAGCTTACAAGATGAACAACAAAGATGTCTTGGAGGAAGGACAAATCAACAATTTTCCCCAGGGTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0006810 GO:0008150 GO:0012505 GO:0012506 GO:0012510 GO:0016020 GO:0016192 GO:0030117 GO:0030118 GO:0030119 GO:0030120 GO:0030121 GO:0030125 GO:0030130 GO:0030131 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0048475 GO:0051179 GO:0051234 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

Adaptin_N Alpha_adaptinC2

Protein Analysis

874

Amino Acids

96.11

Weight (kDa)

5.85

Isoelectric Point (pI)

44.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Adaptin_N	PF01602	27 - 579	6.2e-154	Adaptin N terminal region
Alpha_adaptinC2	PF02883	758 - 871	2.2e-33	Adaptin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004423)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23900 AT1G23900 AT1G23900 AT1G60070 AT1G60070
fragaria_vesca	FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830
malus_domestica	MD13G1089300.v1.1 MD16G1089500.v1.1
prunus_persica	Prupe.1G256500_v2.0.a1
pyrus_communis	pycom13g07770 pycom16g07660
rosa_chinensis	RchiOBHm_Chr4g0444171
rosa_laevigata	RLG00000005850
rosa_multiflora	Rmu_sc0034408.1_g000001 Rmu_ssc0000462.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384760
rosa_rugosa	Rorug04G0350700 Rorug04G0350700
rosa_samantha	Rh4AG411400 Rh4BG422800 Rh4CG154500 Rh4CG437100 Rh4DG418100
rosa_wichuraiana	Rw4G035340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	503
Acc16I	TGCGCA	1 cut(s)	2546
AccB1I	GGYRCC	1 cut(s)	147
AccB7I	CCANNNNNTGG	2 cut(s)	184, 2033
AccBSI	CCGCTC	1 cut(s)	2088
AccI	GTMKAC	1 cut(s)	2063
AccII	CGCG	2 cut(s)	25, 233
AccIII	TCCGGA	2 cut(s)	17, 468
AciI	CCGC	4 cut(s)	524, 1376, 2086, 2454
AcsI	RAATTY	5 cut(s)	529, 1221, 1303, 1717, 1918
AcuI	CTGAAG	3 cut(s)	242, 1301, 1872
AfaI	GTAC	6 cut(s)	604, 716, 1041, 1265, 1670, 2154
AfeI	AGCGCT	1 cut(s)	633
AfiI	CCNNNNNNNGG	9 cut(s)	157, 184, 468, 475, 520, 1570, 2033, 2453, 2474
AflII	CTTAAG	1 cut(s)	1556
AflIII	ACRYGT	2 cut(s)	928, 1467
AjnI	CCWGG	4 cut(s)	156, 828, 2329, 2613
Alw21I	GWGCWC	5 cut(s)	491, 659, 1167, 1399, 1999
Alw44I	GTGCAC	1 cut(s)	655
AlwNI	CAGNNNCTG	1 cut(s)	1279
Aor13HI	TCCGGA	2 cut(s)	17, 468
Aor51HI	AGCGCT	1 cut(s)	633
AoxI	GGCC	3 cut(s)	271, 1104, 2257
ApaI	GGGCCC	1 cut(s)	1108
ApaLI	GTGCAC	1 cut(s)	655
ApoI	RAATTY	5 cut(s)	529, 1221, 1303, 1717, 1918
ArsI	GACNNNNNNTTYG	2 cut(s)	360, 392
AseI	ATTAAT	1 cut(s)	537
Asp700I	GAANNNNTTC	1 cut(s)	8
AspLEI	GCGC	3 cut(s)	27, 634, 2547
AspS9I	GGNCC	3 cut(s)	1104, 1105, 2258
AsuHPI	GGTGA	6 cut(s)	1347, 1475, 1967, 2133, 2229, 2370
AsuII	TTCGAA	1 cut(s)	2171
AsuNHI	GCTAGC	1 cut(s)	2450
AxyI	CCTNAGG	1 cut(s)	29
BaeGI	GKGCMC	2 cut(s)	659, 1108
BamHI	GGATCC	2 cut(s)	736, 1504
BanI	GGYRCC	1 cut(s)	147
BanII	GRGCYC	3 cut(s)	1108, 1167, 1999
BarI	GAAGNNNNNNTAC	2 cut(s)	1247, 1279
BauI	CACGAG	1 cut(s)	414
BbsI	GAAGAC	2 cut(s)	918, 1964
Bbv12I	GWGCWC	5 cut(s)	491, 659, 1167, 1399, 1999
BbvCI	CCTCAGC	1 cut(s)	72
BccI	CCATC	7 cut(s)	403, 500, 947, 1639, 2173, 2278, 2495
BciT130I	CCWGG	4 cut(s)	158, 830, 2331, 2615
BciVI	GTATCC	2 cut(s)	182, 2277
BclI	TGATCA	3 cut(s)	1189, 1270, 1414
BfaI	CTAG	5 cut(s)	689, 801, 1941, 2382, 2451
BfmI	CTRYAG	4 cut(s)	66, 142, 2205, 2274
BfoI	RGCGCY	1 cut(s)	635
BfrI	CTTAAG	1 cut(s)	1556
BfuI	GTATCC	2 cut(s)	182, 2277
BglI	GCCNNNNNGGC	1 cut(s)	833
BglII	AGATCT	3 cut(s)	337, 1207, 1748
BlpI	GCTNAGC	2 cut(s)	162, 2089
Bme1390I	CCNGG	4 cut(s)	158, 830, 2331, 2615
BmgT120I	GGNCC	3 cut(s)	1104, 1105, 2258
BmiI	GGNNCC	4 cut(s)	149, 738, 1106, 1506
BmrFI	CCNGG	4 cut(s)	158, 830, 2331, 2615
BmtI	GCTAGC	1 cut(s)	2454
BpiI	GAAGAC	2 cut(s)	918, 1964
BpmI	CTGGAG	1 cut(s)	2220
Bpu10I	CCTNAGC	1 cut(s)	72
Bpu1102I	GCTNAGC	2 cut(s)	162, 2089
Bpu14I	TTCGAA	1 cut(s)	2171
BpuEI	CTTGAG	1 cut(s)	1017
BsaAI	YACGTR	2 cut(s)	53, 929
BsaBI	GATNNNNATC	2 cut(s)	342, 961
BsaJI	CCNNGG	4 cut(s)	828, 1569, 2613, 2614
BsaWI	WCCGGW	2 cut(s)	17, 468
Bsc4I	CCNNNNNNNGG	9 cut(s)	157, 184, 468, 475, 520, 1570, 2033, 2453, 2474
Bse1I	ACTGG	5 cut(s)	355, 525, 621, 1761, 1834
Bse21I	CCTNAGG	1 cut(s)	29
Bse3DI	GCAATG	1 cut(s)	720
Bse8I	GATNNNNATC	2 cut(s)	342, 961
BseAI	TCCGGA	2 cut(s)	17, 468
BseBI	CCWGG	4 cut(s)	158, 830, 2331, 2615
BseDI	CCNNGG	4 cut(s)	828, 1569, 2613, 2614
BseGI	GGATG	3 cut(s)	174, 802, 1773
BseJI	GATNNNNATC	2 cut(s)	342, 961
BseLI	CCNNNNNNNGG	9 cut(s)	157, 184, 468, 475, 520, 1570, 2033, 2453, 2474
BseMI	GCAATG	1 cut(s)	720
BseMII	CTCAG	8 cut(s)	20, 63, 240, 702, 837, 1242, 1284, 2103
BseNI	ACTGG	5 cut(s)	355, 525, 621, 1761, 1834
BseRI	GAGGAG	2 cut(s)	1884, 1936
BseSI	GKGCMC	2 cut(s)	659, 1108
BseYI	CCCAGC	2 cut(s)	184, 725
BsgI	GTGCAG	1 cut(s)	2420
Bsh1236I	CGCG	2 cut(s)	25, 233
BshFI	GGCC	3 cut(s)	273, 1106, 2259
BshNI	GGYRCC	1 cut(s)	147
BsiHKAI	GWGCWC	5 cut(s)	491, 659, 1167, 1399, 1999
BsiSI	CCGG	3 cut(s)	18, 469, 2468
BslFI	GGGAC	2 cut(s)	47, 497
BslI	CCNNNNNNNGG	9 cut(s)	157, 184, 468, 475, 520, 1570, 2033, 2453, 2474
BsmFI	GGGAC	2 cut(s)	47, 497
BsmI	GAATGC	1 cut(s)	874
BsnI	GGCC	3 cut(s)	273, 1106, 2259
Bsp119I	TTCGAA	1 cut(s)	2171
Bsp120I	GGGCCC	1 cut(s)	1104
Bsp1286I	GDGCHC	6 cut(s)	491, 659, 1108, 1167, 1399, 1999
Bsp13I	TCCGGA	2 cut(s)	17, 468
Bsp1407I	TGTACA	2 cut(s)	602, 1039
Bsp1720I	GCTNAGC	2 cut(s)	162, 2089
BspACI	CCGC	4 cut(s)	524, 1376, 2086, 2454
BspANI	GGCC	3 cut(s)	273, 1106, 2259
BspCNI	CTCAG	8 cut(s)	21, 64, 241, 703, 838, 1243, 1285, 2102
BspEI	TCCGGA	2 cut(s)	17, 468
BspFNI	CGCG	2 cut(s)	25, 233
BspLI	GGNNCC	4 cut(s)	149, 738, 1106, 1506
BspMAI	CTGCAG	1 cut(s)	70
BspOI	GCTAGC	1 cut(s)	2454
BspT104I	TTCGAA	1 cut(s)	2171
BspT107I	GGYRCC	1 cut(s)	147
BspTI	CTTAAG	1 cut(s)	1556
BsrBI	CCGCTC	1 cut(s)	2088
BsrDI	GCAATG	1 cut(s)	720
BsrGI	TGTACA	2 cut(s)	602, 1039
BsrI	ACTGG	5 cut(s)	355, 525, 621, 1761, 1834
BssECI	CCNNGG	4 cut(s)	828, 1569, 2613, 2614
BssSI	CACGAG	1 cut(s)	414
Bst2BI	CACGAG	1 cut(s)	414
Bst2UI	CCWGG	4 cut(s)	158, 830, 2331, 2615
Bst4CI	ACNGT	3 cut(s)	152, 1024, 1516
Bst6I	CTCTTC	3 cut(s)	19, 248, 2469
BstAFI	CTTAAG	1 cut(s)	1556
BstAPI	GCANNNNNTGC	1 cut(s)	869
BstAUI	TGTACA	2 cut(s)	602, 1039
BstBAI	YACGTR	2 cut(s)	53, 929
BstBI	TTCGAA	1 cut(s)	2171
BstC8I	GCNNGC	7 cut(s)	58, 936, 1329, 1490, 1935, 2448, 2452
BstF5I	GGATG	3 cut(s)	174, 802, 1773
BstFNI	CGCG	2 cut(s)	25, 233
BstH2I	RGCGCY	1 cut(s)	635
BstHHI	GCGC	3 cut(s)	27, 634, 2547
BstNI	CCWGG	4 cut(s)	158, 830, 2331, 2615
BstNSI	RCATGY	4 cut(s)	184, 1006, 1471, 1492
BstSCI	CCNGG	4 cut(s)	156, 828, 2329, 2613
BstSFI	CTRYAG	4 cut(s)	66, 142, 2205, 2274
BstSLI	GKGCMC	2 cut(s)	659, 1108
BstUI	CGCG	2 cut(s)	25, 233
BstV2I	GAAGAC	2 cut(s)	918, 1964
BstXI	CCANNNNNNTGG	1 cut(s)	1591
Bsu36I	CCTNAGG	1 cut(s)	29
BsuI	GTATCC	2 cut(s)	182, 2277
BsuRI	GGCC	3 cut(s)	273, 1106, 2259
BtsCI	GGATG	3 cut(s)	174, 802, 1773
BtsIMutI	CAGTG	3 cut(s)	628, 1754, 2037
Cac8I	GCNNGC	7 cut(s)	58, 936, 1329, 1490, 1935, 2448, 2452
CaiI	CAGNNNCTG	1 cut(s)	1279
CfoI	GCGC	3 cut(s)	27, 634, 2547
Cfr13I	GGNCC	3 cut(s)	1104, 1105, 2258
CseI	GACGC	2 cut(s)	222, 2374
Csp6I	GTAC	6 cut(s)	603, 715, 1040, 1264, 1669, 2153
CviQI	GTAC	6 cut(s)	603, 715, 1040, 1264, 1669, 2153
Eam1104I	CTCTTC	3 cut(s)	19, 248, 2469
EarI	CTCTTC	3 cut(s)	19, 248, 2469
EciI	GGCGGA	1 cut(s)	539
Ecl136II	GAGCTC	2 cut(s)	1165, 1997
Eco24I	GRGCYC	3 cut(s)	1108, 1167, 1999
Eco32I	GATATC	1 cut(s)	1540
Eco47III	AGCGCT	1 cut(s)	633
Eco53kI	GAGCTC	2 cut(s)	1165, 1997
Eco57I	CTGAAG	3 cut(s)	242, 1301, 1872
Eco81I	CCTNAGG	1 cut(s)	29
EcoICRI	GAGCTC	2 cut(s)	1165, 1997
EcoO109I	RGGNCCY	2 cut(s)	1104, 1105
EcoRI	GAATTC	1 cut(s)	1717
EcoRII	CCWGG	4 cut(s)	156, 828, 2329, 2613
EcoRV	GATATC	1 cut(s)	1540
EcoT38I	GRGCYC	3 cut(s)	1108, 1167, 1999
FalI	AAGNNNNNCTT	4 cut(s)	1665, 1697, 2542, 2574
FaqI	GGGAC	2 cut(s)	47, 497
FauNDI	CATATG	1 cut(s)	703
FbaI	TGATCA	3 cut(s)	1189, 1270, 1414
FblI	GTMKAC	1 cut(s)	2063
FokI	GGATG	3 cut(s)	161, 809, 1780
FriOI	GRGCYC	3 cut(s)	1108, 1167, 1999
FspAI	RTGCGCAY	1 cut(s)	2546
FspBI	CTAG	5 cut(s)	689, 801, 1941, 2382, 2451
FspI	TGCGCA	1 cut(s)	2546
GlaI	GCGC	3 cut(s)	26, 633, 2546
GsaI	CCCAGC	2 cut(s)	188, 729
GsuI	CTGGAG	1 cut(s)	2220
HaeII	RGCGCY	1 cut(s)	635
HaeIII	GGCC	3 cut(s)	273, 1106, 2259
HapII	CCGG	3 cut(s)	18, 469, 2468
HgaI	GACGC	2 cut(s)	222, 2374
HhaI	GCGC	3 cut(s)	27, 634, 2547
Hin6I	GCGC	3 cut(s)	25, 632, 2545
HinP1I	GCGC	3 cut(s)	25, 632, 2545
HindIII	AAGCTT	1 cut(s)	764
HinfI	GANTC	7 cut(s)	4, 40, 343, 848, 967, 1958, 2483
HpaII	CCGG	3 cut(s)	18, 469, 2468
HphI	GGTGA	6 cut(s)	1347, 1475, 1967, 2133, 2229, 2370
Hpy166II	GTNNAC	3 cut(s)	657, 694, 2064
Hpy8I	GTNNAC	3 cut(s)	657, 694, 2064
HpyAV	CCTTC	4 cut(s)	19, 1276, 1893, 2585
HpyCH4III	ACNGT	3 cut(s)	152, 1024, 1516
HpyCH4IV	ACGT	5 cut(s)	52, 79, 928, 1143, 1624
HpySE526I	ACGT	5 cut(s)	52, 79, 928, 1143, 1624
HspAI	GCGC	3 cut(s)	25, 632, 2545
Kpn2I	TCCGGA	2 cut(s)	17, 468
Ksp22I	TGATCA	3 cut(s)	1189, 1270, 1414
LmnI	GCTCC	8 cut(s)	494, 712, 1232, 1897, 1949, 1994, 2002, 2201
MaeI	CTAG	5 cut(s)	689, 801, 1941, 2382, 2451
MaeII	ACGT	5 cut(s)	52, 79, 928, 1143, 1624
MaeIII	GTNAC	8 cut(s)	152, 316, 971, 1139, 1463, 1516, 2376, 2506
MbiI	CCGCTC	1 cut(s)	2088
MhlI	GDGCHC	6 cut(s)	491, 659, 1108, 1167, 1399, 1999
MlyI	GAGTC	2 cut(s)	857, 2492
MmeI	TCCRAC	1 cut(s)	346
MroI	TCCGGA	2 cut(s)	17, 468
MroXI	GAANNNNTTC	1 cut(s)	8
MseI	TTAA	8 cut(s)	537, 581, 998, 1557, 1610, 2108, 2300, 2313
MslI	CAYNNNNRTG	3 cut(s)	179, 1007, 1371
MspA1I	CMGCKG	3 cut(s)	71, 1412, 2414
MspCI	CTTAAG	1 cut(s)	1556
MspI	CCGG	3 cut(s)	18, 469, 2468
MspR9I	CCNGG	4 cut(s)	158, 830, 2331, 2615
Mva1269I	GAATGC	1 cut(s)	874
MvaI	CCWGG	4 cut(s)	158, 830, 2331, 2615
MvnI	CGCG	2 cut(s)	25, 233
NdeI	CATATG	1 cut(s)	703
NheI	GCTAGC	1 cut(s)	2450
NlaIV	GGNNCC	4 cut(s)	149, 738, 1106, 1506
NmuCI	GTSAC	4 cut(s)	316, 971, 1463, 2376
NsbI	TGCGCA	1 cut(s)	2546
NspI	RCATGY	4 cut(s)	184, 1006, 1471, 1492
NspV	TTCGAA	1 cut(s)	2171
PaeI	GCATGC	1 cut(s)	1492
PasI	CCCWGGG	1 cut(s)	2614
PciI	ACATGT	1 cut(s)	1467
PcsI	WCGNNNNNNNCGW	1 cut(s)	49
PctI	GAATGC	1 cut(s)	874
PdmI	GAANNNNTTC	1 cut(s)	8
PfeI	GAWTC	5 cut(s)	4, 40, 343, 967, 1958
PflMI	CCANNNNNTGG	2 cut(s)	184, 2033
PleI	GAGTC	2 cut(s)	856, 2491
PpsI	GAGTC	2 cut(s)	856, 2491
Ppu21I	YACGTR	2 cut(s)	53, 929
PscI	ACATGT	1 cut(s)	1467
PshBI	ATTAAT	1 cut(s)	537
PsiI	TTATAA	1 cut(s)	503
Psp124BI	GAGCTC	2 cut(s)	1167, 1999
Psp6I	CCWGG	4 cut(s)	156, 828, 2329, 2613
PspFI	CCCAGC	2 cut(s)	184, 725
PspGI	CCWGG	4 cut(s)	156, 828, 2329, 2613
PspN4I	GGNNCC	4 cut(s)	149, 738, 1106, 1506
PspOMI	GGGCCC	1 cut(s)	1104
PspPI	GGNCC	3 cut(s)	1104, 1105, 2258
PstI	CTGCAG	1 cut(s)	70
PstNI	CAGNNNCTG	1 cut(s)	1279
PvuII	CAGCTG	3 cut(s)	71, 1412, 2414
RsaI	GTAC	6 cut(s)	604, 716, 1041, 1265, 1670, 2154
RsaNI	GTAC	6 cut(s)	603, 715, 1040, 1264, 1669, 2153
RseI	CAYNNNNRTG	3 cut(s)	179, 1007, 1371
SacI	GAGCTC	2 cut(s)	1167, 1999
SaqAI	TTAA	8 cut(s)	537, 581, 998, 1557, 1610, 2108, 2300, 2313
Sau96I	GGNCC	3 cut(s)	1104, 1105, 2258
SchI	GAGTC	2 cut(s)	857, 2492
ScrFI	CCNGG	4 cut(s)	158, 830, 2331, 2615
SduI	GDGCHC	6 cut(s)	491, 659, 1108, 1167, 1399, 1999
SfcI	CTRYAG	4 cut(s)	66, 142, 2205, 2274
SfuI	TTCGAA	1 cut(s)	2171
SmiMI	CAYNNNNRTG	3 cut(s)	179, 1007, 1371
SmlI	CTYRAG	2 cut(s)	1032, 1556
SmoI	CTYRAG	2 cut(s)	1032, 1556
SphI	GCATGC	1 cut(s)	1492
SsiI	CCGC	4 cut(s)	524, 1376, 2086, 2454
SspI	AATATT	3 cut(s)	394, 946, 1483
SspMI	CTAG	5 cut(s)	689, 801, 1941, 2382, 2451
SstI	GAGCTC	2 cut(s)	1167, 1999
StyD4I	CCNGG	4 cut(s)	156, 828, 2329, 2613
TaaI	ACNGT	3 cut(s)	152, 1024, 1516
TaiI	ACGT	5 cut(s)	55, 82, 931, 1146, 1627
TaqI	TCGA	9 cut(s)	288, 454, 636, 909, 965, 1432, 1977, 2171, 2321
TatI	WGTACW	3 cut(s)	602, 1039, 1668
TauI	GCSGC	2 cut(s)	2088, 2457
TfiI	GAWTC	5 cut(s)	4, 40, 343, 967, 1958
Tru1I	TTAA	8 cut(s)	537, 581, 998, 1557, 1610, 2108, 2300, 2313
Tru9I	TTAA	8 cut(s)	537, 581, 998, 1557, 1610, 2108, 2300, 2313
TscAI	CASTG	3 cut(s)	628, 1761, 2044
TseFI	GTSAC	4 cut(s)	316, 971, 1463, 2376
Tsp45I	GTSAC	4 cut(s)	316, 971, 1463, 2376
TspGWI	ACGGA	1 cut(s)	749
TspRI	CASTG	3 cut(s)	628, 1761, 2044
Van91I	CCANNNNNTGG	2 cut(s)	184, 2033
Vha464I	CTTAAG	1 cut(s)	1556
VneI	GTGCAC	1 cut(s)	655
VspI	ATTAAT	1 cut(s)	537
XapI	RAATTY	5 cut(s)	529, 1221, 1303, 1717, 1918
XceI	RCATGY	4 cut(s)	184, 1006, 1471, 1492
XcmI	CCANNNNNNNNNTGG	1 cut(s)	946
XmiI	GTMKAC	1 cut(s)	2063
XmnI	GAANNNNTTC	1 cut(s)	8
XspI	CTAG	5 cut(s)	689, 801, 1941, 2382, 2451

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.