Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0004423

Physical Location & Seq

Genomic Coordinates Forward (+)

32381457 .. 32391618

Gene Structure 10162 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g34830.t7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2613 bp

ATGAATCCCTTCTCCTCCGGAACGCGCCTGAGGGACATGATTCGGGCAATACGTGCTTGCAAAACTGCAGCAGAGGAACGCGGTGTTGTAAGGAAAGAGTGTGCTGCTATTCGTGCTGCCATAAATGAAAATGATCATGACTACAGGCACCGTAACCTGGCTAAGCTCATGTTCATCCACATGCTGGGTTACCCAACACATTTTGGTCAAATGGAGTGCCTGAAATTGATAGCATCTGCTGGTTTTCCGGAGAAGAGAATAGGGTATCTTGGCCTCATGCTGCTTCTCGATGAAAGACAAGAAGTTTTGATGTTGGTCACAAACTCGTTGAAACAAGATCTGAATCACACAAACCAGTATATTGTTGGACTTGCTCTTTGTGCTTTGGGAAATATTTGTTCAGCAGAGATGGCTCGTGATCTTGCACCAGAAGTAGAAAGATTGCTGCAATTTCGAGATCCAAATATCCGGAAAAAGGCAGCATTGTGCTCAATAAGGATTATAAAGAAAGTACCTGAACTGGCGGAAAACTTTATTAATCCTGCTGCTGCCTTACTTAAAGAAAAGCATCATGGCGTTTTAATCACAGGAGTTCAACTTTGTACAGATCTTTGTAAAATCAGTGAAGAAGCCCTCGAATACTTTAGATTGAAGTGCACTGAGGGTTTGGTCAAGACACTAAAGGATCTAGTGAACAGCCCATATGCTCCTGAGTACGACATTGCTGGGATCACGGATCCCTTCCTCCATATTAGATTGCTGAAGCTTTTGCGTGTTTTGGGTCAAGGAGATGAGGATGCGAGTGAATGTATGAATGACATACTTGCCCAGGTGGCTACAAAAACTGAGTCAAACAAAAATGCAGGGAATGCAATTCTATACGAATGTGTGGCAACTATAATGAGCATCGAAGATAATGGTGGCTTACGTGTGCTTGCCATCAATATTTTGGGAAGATTCTTATCGAATCGTGACAACAATATCAGATATGTTGCGTTAAACATGCTGATGAGAGCCATTACAGTTGATGCTCAAGCTGTACAGAGGCATCGGGCAACTATCTTGGAATGTGTAAAGGATTTAGATGCTTCAATTCGTAAAAGGGCCCTTGAACTTGTTTATGTCCTTGTGAATGAAACTAACGTGAAACCTCTAACAAAAGAGCTCATTGATTATTTGGAAGTAAGTGATGAAGATTTCAAGGGAGATCTTACAGCGAAAATTTGCTCTCTTGTCAAGAAGTTTTCCCCTGAGAAGATTTGGTACATTGATCAGATGCTCAAGGTTCTCTCCGAGGCTGGAAATTTTGTAAAAGATGAAGTATGGCATGCGGTTATTGTTGTGATAACAAATTCACCTGATCTTCATGGGTATACGGTTAGGGCTTTATACAGAGCAATCCAAACATCAGCGGATCAGGAAAGCTTGGTCCGAGTAGCAGTTTGGTGCATCGGAGAATACGGTGACATGTTGGTAAATAATATTGGCATGCTTGATGTTGAGGATCCCATAACAGTAACAGAGTCTGATGCTGTGGATATCATAGAAATTGCCCTTAAGCACCATACCTCGGATCTTACTACCAAGGCTATGGCTCTGATTGCTCTCTTAAAGCTATCTTCACGTTTCCCATCTTGTTCAGAGAGGATCAAAGAAATTGTAGCTCAGTATAAAGGAAGCCTTGTGCTTGAACTGCAGCAAAGATCCATTGAAATGAATTCTATTATCTCGAAGCATCAGAACATTAGATCTACACTGGTTGAGAGGATGCCAACTTTGGATTTGTTACAGTGGGAGGAACAGCAGAGTGGTTCTATACCAACTACTACATCAACTTCTGCTCATGCTTCAATCAACATACCAAATGGAGTTGCCAAACCTTCTTCAGCTCCTCTTGTGGATTTACTTGATCTAAATTCAGATGATGTGCCGGCCCCTAGCTCCTCTGGTGGTGATTTTCTTCATGATCTTCTCGATGTTGATTTGTCGAAACAATCGGGTGTGAATCATTCTCCAAACAATGGCACCAATGCTTTAATGGATCTCTTGTCTATTGGTACGCCTACACAAAGTAGCTCAGCTATCTCTGATCTGTTAAATTCTGGTCAAGATAACAAAGCATCTGTTTCACCATTAGATGTACTATCATCTCCATCTTCGAACTCCGTACAACCCACTTCTTCTGCTGGAGCGATTGATTTGTTGGACAGCTTTGCGACCAACTCCCCAATACAAGAAAACAATGGCCCTGCTTATCCATCTGTAGTTGCATTTGAGAGTAGCAATTTGAGGATAGGGTTTAACTTTTCGAAGCTGCCTGGAAATCCACAAACGACAATAATCAAGGCTACATTCACTAATTTGTCACCGAGTGTCTATACAGATTTTATTTTTCAGGCAGCTGTTCCAAAGTTTCTACAACTGCACTTGGAGCCAGCTAGCGGCAATACTCTTCCGGCAAGTGGTAACGAGTCCATTACACAAACTTTGAGAGTTACCAATAGCCAACATGGAAAGAAAAGTCTCGTCATGCGCATAAGGATAGCTTACAAGATGAACAACAAAGATGTTTTGGAGGAAGGACAGATCAACAATTTTCCCCAGGGCTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0006810 GO:0008150 GO:0012505 GO:0012506 GO:0012510 GO:0016020 GO:0016192 GO:0030117 GO:0030118 GO:0030119 GO:0030120 GO:0030121 GO:0030125 GO:0030130 GO:0030131 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0048475 GO:0051179 GO:0051234 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

Adaptin_N Alpha_adaptinC2

Protein Analysis

871

Amino Acids

95.77

Weight (kDa)

5.77

Isoelectric Point (pI)

42.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Adaptin_N	PF01602	21 - 272	1.6e-59	Adaptin N terminal region
Alpha_adaptinC2	PF02883	447 - 560	1.1e-33	Adaptin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004423)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23900 AT1G23900 AT1G23900 AT1G60070 AT1G60070
fragaria_vesca	FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830
malus_domestica	MD13G1089300.v1.1 MD16G1089500.v1.1
prunus_persica	Prupe.1G256500_v2.0.a1
pyrus_communis	pycom13g07770 pycom16g07660
rosa_chinensis	RchiOBHm_Chr4g0444171
rosa_laevigata	RLG00000005850
rosa_multiflora	Rmu_sc0034408.1_g000001 Rmu_ssc0000462.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384760
rosa_rugosa	Rorug04G0350700 Rorug04G0350700
rosa_samantha	Rh4AG411400 Rh4BG422800 Rh4CG154500 Rh4CG437100 Rh4DG418100
rosa_wichuraiana	Rw4G035340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	503
Acc16I	TGCGCA	1 cut(s)	2534
AccB1I	GGYRCC	2 cut(s)	147, 2024
AccB7I	CCANNNNNTGG	2 cut(s)	184, 2021
AccI	GTMKAC	1 cut(s)	1373
AccII	CGCG	2 cut(s)	25, 81
AccIII	TCCGGA	3 cut(s)	17, 247, 468
AciI	CCGC	5 cut(s)	81, 524, 1331, 1412, 2442
AcsI	RAATTY	6 cut(s)	1221, 1303, 1351, 1717, 1915, 2098
AcuI	CTGAAG	2 cut(s)	782, 1869
AdeI	CACNNNGTG	1 cut(s)	2372
AfaI	GTAC	8 cut(s)	513, 604, 716, 1041, 1265, 2059, 2142, 2169
AfiI	CCNNNNNNNGG	7 cut(s)	157, 184, 475, 1570, 2021, 2441, 2462
AflII	CTTAAG	1 cut(s)	1556
AflIII	ACRYGT	2 cut(s)	928, 1467
AgsI	TTSAA	9 cut(s)	331, 596, 652, 1092, 1112, 1201, 1691, 1712, 1851
AjnI	CCWGG	4 cut(s)	156, 828, 2317, 2601
Alw21I	GWGCWC	3 cut(s)	491, 659, 1167
Alw26I	GTCTC	1 cut(s)	2528
Alw44I	GTGCAC	1 cut(s)	655
AlwNI	CAGNNNCTG	1 cut(s)	1526
Aor13HI	TCCGGA	3 cut(s)	17, 247, 468
AoxI	GGCC	4 cut(s)	271, 1104, 1932, 2245
ApaI	GGGCCC	1 cut(s)	1108
ApaLI	GTGCAC	1 cut(s)	655
ApoI	RAATTY	6 cut(s)	1221, 1303, 1351, 1717, 1915, 2098
ArsI	GACNNNNNNTTYG	4 cut(s)	360, 392, 833, 865
AseI	ATTAAT	1 cut(s)	537
Asp700I	GAANNNNTTC	1 cut(s)	8
AspLEI	GCGC	2 cut(s)	27, 2535
AspS9I	GGNCC	5 cut(s)	1104, 1105, 1429, 1933, 2246
AsuHPI	GGTGA	5 cut(s)	1347, 1475, 1964, 2121, 2358
AsuII	TTCGAA	2 cut(s)	2159, 2309
AsuNHI	GCTAGC	1 cut(s)	2438
AvaII	GGWCC	1 cut(s)	1429
AxyI	CCTNAGG	1 cut(s)	29
BaeGI	GKGCMC	2 cut(s)	659, 1108
BamHI	GGATCC	2 cut(s)	736, 1504
BanI	GGYRCC	2 cut(s)	147, 2024
BanII	GRGCYC	2 cut(s)	1108, 1167
BarI	GAAGNNNNNNTAC	2 cut(s)	1247, 1279
BauI	CACGAG	1 cut(s)	414
Bbv12I	GWGCWC	3 cut(s)	491, 659, 1167
BccI	CCATC	5 cut(s)	403, 947, 1639, 2161, 2266
BciT130I	CCWGG	4 cut(s)	158, 830, 2319, 2603
BclI	TGATCA	2 cut(s)	133, 1270
BcoDI	GTCTC	1 cut(s)	2528
BfaI	CTAG	3 cut(s)	689, 1938, 2439
BfmI	CTRYAG	4 cut(s)	66, 142, 1694, 2262
BfrI	CTTAAG	1 cut(s)	1556
BglI	GCCNNNNNGGC	1 cut(s)	833
BglII	AGATCT	4 cut(s)	337, 607, 1207, 1748
BlpI	GCTNAGC	2 cut(s)	162, 2077
Bme1390I	CCNGG	4 cut(s)	158, 830, 2319, 2603
Bme18I	GGWCC	1 cut(s)	1429
BmgT120I	GGNCC	5 cut(s)	1104, 1105, 1429, 1933, 2246
BmiI	GGNNCC	7 cut(s)	149, 738, 1106, 1506, 1935, 2026, 2433
BmrFI	CCNGG	4 cut(s)	158, 830, 2319, 2603
BmtI	GCTAGC	1 cut(s)	2442
BpmI	CTGGAG	1 cut(s)	2208
Bpu1102I	GCTNAGC	2 cut(s)	162, 2077
Bpu14I	TTCGAA	2 cut(s)	2159, 2309
BpuEI	CTTGAG	2 cut(s)	1017, 1265
BsaAI	YACGTR	2 cut(s)	53, 929
BsaBI	GATNNNNATC	2 cut(s)	342, 961
BsaJI	CCNNGG	6 cut(s)	828, 1293, 1569, 1584, 2601, 2602
BsaWI	WCCGGW	3 cut(s)	17, 247, 468
Bsc4I	CCNNNNNNNGG	7 cut(s)	157, 184, 475, 1570, 2021, 2441, 2462
Bse118I	RCCGGY	1 cut(s)	1930
Bse1I	ACTGG	3 cut(s)	355, 525, 1761
Bse21I	CCTNAGG	1 cut(s)	29
Bse3DI	GCAATG	1 cut(s)	720
Bse8I	GATNNNNATC	2 cut(s)	342, 961
BseAI	TCCGGA	3 cut(s)	17, 247, 468
BseBI	CCWGG	4 cut(s)	158, 830, 2319, 2603
BseDI	CCNNGG	6 cut(s)	828, 1293, 1569, 1584, 2601, 2602
BseGI	GGATG	3 cut(s)	174, 802, 1773
BseJI	GATNNNNATC	2 cut(s)	342, 961
BseLI	CCNNNNNNNGG	7 cut(s)	157, 184, 475, 1570, 2021, 2441, 2462
BseMI	GCAATG	1 cut(s)	720
BseMII	CTCAG	7 cut(s)	20, 651, 702, 837, 1242, 1679, 2091
BseNI	ACTGG	3 cut(s)	355, 525, 1761
BseRI	GAGGAG	3 cut(s)	4, 1881, 1933
BseSI	GKGCMC	2 cut(s)	659, 1108
BseYI	CCCAGC	2 cut(s)	184, 725
BsgI	GTGCAG	1 cut(s)	2408
Bsh1236I	CGCG	2 cut(s)	25, 81
BshFI	GGCC	4 cut(s)	273, 1106, 1934, 2247
BshNI	GGYRCC	2 cut(s)	147, 2024
BsiHKAI	GWGCWC	3 cut(s)	491, 659, 1167
BsiSI	CCGG	5 cut(s)	18, 248, 469, 1931, 2456
BslFI	GGGAC	1 cut(s)	47
BslI	CCNNNNNNNGG	7 cut(s)	157, 184, 475, 1570, 2021, 2441, 2462
BsmAI	GTCTC	1 cut(s)	2528
BsmFI	GGGAC	1 cut(s)	47
BsmI	GAATGC	1 cut(s)	874
BsnI	GGCC	4 cut(s)	273, 1106, 1934, 2247
Bsp119I	TTCGAA	2 cut(s)	2159, 2309
Bsp120I	GGGCCC	1 cut(s)	1104
Bsp1286I	GDGCHC	4 cut(s)	491, 659, 1108, 1167
Bsp13I	TCCGGA	3 cut(s)	17, 247, 468
Bsp1407I	TGTACA	2 cut(s)	602, 1039
Bsp1720I	GCTNAGC	2 cut(s)	162, 2077
BspACI	CCGC	5 cut(s)	81, 524, 1331, 1412, 2442
BspANI	GGCC	4 cut(s)	273, 1106, 1934, 2247
BspCNI	CTCAG	7 cut(s)	21, 652, 703, 838, 1243, 1678, 2090
BspEI	TCCGGA	3 cut(s)	17, 247, 468
BspFNI	CGCG	2 cut(s)	25, 81
BspHI	TCATGA	2 cut(s)	136, 1963
BspLI	GGNNCC	7 cut(s)	149, 738, 1106, 1506, 1935, 2026, 2433
BspMAI	CTGCAG	2 cut(s)	70, 1698
BspOI	GCTAGC	1 cut(s)	2442
BspT104I	TTCGAA	2 cut(s)	2159, 2309
BspT107I	GGYRCC	2 cut(s)	147, 2024
BspTI	CTTAAG	1 cut(s)	1556
BsrDI	GCAATG	1 cut(s)	720
BsrFI	RCCGGY	1 cut(s)	1930
BsrGI	TGTACA	2 cut(s)	602, 1039
BsrI	ACTGG	3 cut(s)	355, 525, 1761
BssAI	RCCGGY	1 cut(s)	1930
BssECI	CCNNGG	6 cut(s)	828, 1293, 1569, 1584, 2601, 2602
BssNAI	GTATAC	1 cut(s)	1374
BssSI	CACGAG	1 cut(s)	414
BssT1I	CCWWGG	1 cut(s)	1584
Bst1107I	GTATAC	1 cut(s)	1374
Bst2BI	CACGAG	1 cut(s)	414
Bst2UI	CCWGG	4 cut(s)	158, 830, 2319, 2603
Bst4CI	ACNGT	6 cut(s)	152, 1024, 1378, 1463, 1516, 1791
Bst6I	CTCTTC	2 cut(s)	248, 2457
BstAFI	CTTAAG	1 cut(s)	1556
BstAPI	GCANNNNNTGC	2 cut(s)	53, 869
BstAUI	TGTACA	2 cut(s)	602, 1039
BstBAI	YACGTR	2 cut(s)	53, 929
BstBI	TTCGAA	2 cut(s)	2159, 2309
BstC8I	GCNNGC	7 cut(s)	58, 936, 1329, 1490, 1932, 2436, 2440
BstDEI	CTNAG	8 cut(s)	29, 162, 660, 711, 846, 1251, 1665, 2077
BstEII	GGTNACC	1 cut(s)	188
BstF5I	GGATG	3 cut(s)	174, 802, 1773
BstFNI	CGCG	2 cut(s)	25, 81
BstHHI	GCGC	2 cut(s)	27, 2535
BstMAI	GTCTC	1 cut(s)	2528
BstMWI	GCNNNNNNNGC	9 cut(s)	53, 113, 380, 410, 833, 869, 1601, 1693, 2431
BstNI	CCWGG	4 cut(s)	158, 830, 2319, 2603
BstNSI	RCATGY	5 cut(s)	184, 1006, 1331, 1471, 1492
BstPI	GGTNACC	1 cut(s)	188
BstSCI	CCNGG	4 cut(s)	156, 828, 2317, 2601
BstSFI	CTRYAG	4 cut(s)	66, 142, 1694, 2262
BstSLI	GKGCMC	2 cut(s)	659, 1108
BstUI	CGCG	2 cut(s)	25, 81
BstXI	CCANNNNNNTGG	1 cut(s)	1591
BstZ17I	GTATAC	1 cut(s)	1374
Bsu36I	CCTNAGG	1 cut(s)	29
BsuRI	GGCC	4 cut(s)	273, 1106, 1934, 2247
BtsCI	GGATG	3 cut(s)	174, 802, 1773
BtsIMutI	CAGTG	4 cut(s)	628, 657, 1754, 1796
Cac8I	GCNNGC	7 cut(s)	58, 936, 1329, 1490, 1932, 2436, 2440
CaiI	CAGNNNCTG	1 cut(s)	1526
CciI	TCATGA	2 cut(s)	136, 1963
CfoI	GCGC	2 cut(s)	27, 2535
Cfr10I	RCCGGY	1 cut(s)	1930
Cfr13I	GGNCC	5 cut(s)	1104, 1105, 1429, 1933, 2246
Csp6I	GTAC	8 cut(s)	512, 603, 715, 1040, 1264, 2058, 2141, 2168
CviQI	GTAC	8 cut(s)	512, 603, 715, 1040, 1264, 2058, 2141, 2168
DdeI	CTNAG	8 cut(s)	29, 162, 660, 711, 846, 1251, 1665, 2077
DraIII	CACNNNGTG	1 cut(s)	2372
Eam1104I	CTCTTC	2 cut(s)	248, 2457
EarI	CTCTTC	2 cut(s)	248, 2457
EciI	GGCGGA	1 cut(s)	539
Ecl136II	GAGCTC	1 cut(s)	1165
Eco130I	CCWWGG	1 cut(s)	1584
Eco24I	GRGCYC	2 cut(s)	1108, 1167
Eco32I	GATATC	1 cut(s)	1540
Eco47I	GGWCC	1 cut(s)	1429
Eco53kI	GAGCTC	1 cut(s)	1165
Eco57I	CTGAAG	2 cut(s)	782, 1869
Eco81I	CCTNAGG	1 cut(s)	29
Eco91I	GGTNACC	1 cut(s)	188
EcoICRI	GAGCTC	1 cut(s)	1165
EcoO109I	RGGNCCY	2 cut(s)	1104, 1105
EcoO65I	GGTNACC	1 cut(s)	188
EcoRI	GAATTC	1 cut(s)	1717
EcoRII	CCWGG	4 cut(s)	156, 828, 2317, 2601
EcoRV	GATATC	1 cut(s)	1540
EcoT14I	CCWWGG	1 cut(s)	1584
EcoT38I	GRGCYC	2 cut(s)	1108, 1167
ErhI	CCWWGG	1 cut(s)	1584
FalI	AAGNNNNNCTT	4 cut(s)	1665, 1697, 2530, 2562
FaqI	GGGAC	1 cut(s)	47
FauNDI	CATATG	1 cut(s)	703
FbaI	TGATCA	2 cut(s)	133, 1270
FblI	GTMKAC	1 cut(s)	1373
FokI	GGATG	3 cut(s)	161, 809, 1780
FriOI	GRGCYC	2 cut(s)	1108, 1167
FspAI	RTGCGCAY	1 cut(s)	2534
FspBI	CTAG	3 cut(s)	689, 1938, 2439
FspI	TGCGCA	1 cut(s)	2534
GlaI	GCGC	2 cut(s)	26, 2534
GsaI	CCCAGC	2 cut(s)	188, 729
GsuI	CTGGAG	1 cut(s)	2208
HaeIII	GGCC	4 cut(s)	273, 1106, 1934, 2247
HapII	CCGG	5 cut(s)	18, 248, 469, 1931, 2456
HhaI	GCGC	2 cut(s)	27, 2535
Hin6I	GCGC	2 cut(s)	25, 2533
HinP1I	GCGC	2 cut(s)	25, 2533
HindIII	AAGCTT	2 cut(s)	764, 1423
HinfI	GANTC	9 cut(s)	4, 40, 343, 848, 957, 967, 1523, 2005, 2471
HpaII	CCGG	5 cut(s)	18, 248, 469, 1931, 2456
HphI	GGTGA	5 cut(s)	1347, 1475, 1964, 2121, 2358
Hpy166II	GTNNAC	3 cut(s)	657, 694, 1374
Hpy8I	GTNNAC	3 cut(s)	657, 694, 1374
HpyAV	CCTTC	4 cut(s)	19, 751, 1890, 2573
HpyCH4III	ACNGT	6 cut(s)	152, 1024, 1378, 1463, 1516, 1791
HpyCH4IV	ACGT	4 cut(s)	52, 928, 1143, 1624
HpyF10VI	GCNNNNNNNGC	9 cut(s)	53, 113, 380, 410, 833, 869, 1601, 1693, 2431
HpyF3I	CTNAG	8 cut(s)	29, 162, 660, 711, 846, 1251, 1665, 2077
HpySE526I	ACGT	4 cut(s)	52, 928, 1143, 1624
HspAI	GCGC	2 cut(s)	25, 2533
Kpn2I	TCCGGA	3 cut(s)	17, 247, 468
KroI	GCCGGC	1 cut(s)	1930
KroNI	GCCGGC	1 cut(s)	1932
Ksp22I	TGATCA	2 cut(s)	133, 1270
LmnI	GCTCC	5 cut(s)	712, 1894, 1946, 2189, 2431
MaeI	CTAG	3 cut(s)	689, 1938, 2439
MaeII	ACGT	4 cut(s)	52, 928, 1143, 1624
MhlI	GDGCHC	4 cut(s)	491, 659, 1108, 1167
MlyI	GAGTC	3 cut(s)	857, 1532, 2480
MmeI	TCCRAC	2 cut(s)	346, 2184
MroI	TCCGGA	3 cut(s)	17, 247, 468
MroNI	GCCGGC	1 cut(s)	1930
MroXI	GAANNNNTTC	1 cut(s)	8
MseI	TTAA	9 cut(s)	537, 558, 581, 998, 1557, 1610, 2036, 2096, 2301
MslI	CAYNNNNRTG	3 cut(s)	179, 1007, 1712
MspA1I	CMGCKG	2 cut(s)	1412, 2402
MspCI	CTTAAG	1 cut(s)	1556
MspI	CCGG	5 cut(s)	18, 248, 469, 1931, 2456
MspR9I	CCNGG	4 cut(s)	158, 830, 2319, 2603
Mva1269I	GAATGC	1 cut(s)	874
MvaI	CCWGG	4 cut(s)	158, 830, 2319, 2603
MvnI	CGCG	2 cut(s)	25, 81
MwoI	GCNNNNNNNGC	9 cut(s)	53, 113, 380, 410, 833, 869, 1601, 1693, 2431
NaeI	GCCGGC	1 cut(s)	1932
NdeI	CATATG	1 cut(s)	703
NgoMIV	GCCGGC	1 cut(s)	1930
NheI	GCTAGC	1 cut(s)	2438
NlaIV	GGNNCC	7 cut(s)	149, 738, 1106, 1506, 1935, 2026, 2433
NmuCI	GTSAC	4 cut(s)	316, 971, 1463, 2364
NsbI	TGCGCA	1 cut(s)	2534
NspI	RCATGY	5 cut(s)	184, 1006, 1331, 1471, 1492
NspV	TTCGAA	2 cut(s)	2159, 2309
PaeI	GCATGC	2 cut(s)	1331, 1492
PagI	TCATGA	2 cut(s)	136, 1963
PasI	CCCWGGG	1 cut(s)	2602
PciI	ACATGT	1 cut(s)	1467
PcsI	WCGNNNNNNNCGW	1 cut(s)	49
PctI	GAATGC	1 cut(s)	874
PdiI	GCCGGC	1 cut(s)	1932
PdmI	GAANNNNTTC	1 cut(s)	8
PfeI	GAWTC	6 cut(s)	4, 40, 343, 957, 967, 2005
PflMI	CCANNNNNTGG	2 cut(s)	184, 2021
PleI	GAGTC	3 cut(s)	856, 1531, 2479
PpsI	GAGTC	3 cut(s)	856, 1531, 2479
Ppu21I	YACGTR	2 cut(s)	53, 929
PscI	ACATGT	1 cut(s)	1467
PshBI	ATTAAT	1 cut(s)	537
PsiI	TTATAA	1 cut(s)	503
Psp124BI	GAGCTC	1 cut(s)	1167
Psp6I	CCWGG	4 cut(s)	156, 828, 2317, 2601
PspEI	GGTNACC	1 cut(s)	188
PspFI	CCCAGC	2 cut(s)	184, 725
PspGI	CCWGG	4 cut(s)	156, 828, 2317, 2601
PspN4I	GGNNCC	7 cut(s)	149, 738, 1106, 1506, 1935, 2026, 2433
PspOMI	GGGCCC	1 cut(s)	1104
PspPI	GGNCC	5 cut(s)	1104, 1105, 1429, 1933, 2246
PstI	CTGCAG	2 cut(s)	70, 1698
PstNI	CAGNNNCTG	1 cut(s)	1526
PvuII	CAGCTG	1 cut(s)	2402
RsaI	GTAC	8 cut(s)	513, 604, 716, 1041, 1265, 2059, 2142, 2169
RsaNI	GTAC	8 cut(s)	512, 603, 715, 1040, 1264, 2058, 2141, 2168
RseI	CAYNNNNRTG	3 cut(s)	179, 1007, 1712
SacI	GAGCTC	1 cut(s)	1167
SaqAI	TTAA	9 cut(s)	537, 558, 581, 998, 1557, 1610, 2036, 2096, 2301
Sau96I	GGNCC	5 cut(s)	1104, 1105, 1429, 1933, 2246
SchI	GAGTC	3 cut(s)	857, 1532, 2480
ScrFI	CCNGG	4 cut(s)	158, 830, 2319, 2603
SduI	GDGCHC	4 cut(s)	491, 659, 1108, 1167
SfcI	CTRYAG	4 cut(s)	66, 142, 1694, 2262
SfuI	TTCGAA	2 cut(s)	2159, 2309
SinI	GGWCC	1 cut(s)	1429
SmiMI	CAYNNNNRTG	3 cut(s)	179, 1007, 1712
SmlI	CTYRAG	3 cut(s)	1032, 1280, 1556
SmoI	CTYRAG	3 cut(s)	1032, 1280, 1556
SphI	GCATGC	2 cut(s)	1331, 1492
SsiI	CCGC	5 cut(s)	81, 524, 1331, 1412, 2442
SspI	AATATT	3 cut(s)	394, 946, 1483
SspMI	CTAG	3 cut(s)	689, 1938, 2439
SstI	GAGCTC	1 cut(s)	1167
StyD4I	CCNGG	4 cut(s)	156, 828, 2317, 2601
StyI	CCWWGG	1 cut(s)	1584
TaaI	ACNGT	6 cut(s)	152, 1024, 1378, 1463, 1516, 1791
TaiI	ACGT	4 cut(s)	55, 931, 1146, 1627
TatI	WGTACW	3 cut(s)	602, 1039, 2140
TauI	GCSGC	1 cut(s)	2445
TfiI	GAWTC	6 cut(s)	4, 40, 343, 957, 967, 2005
Tru1I	TTAA	9 cut(s)	537, 558, 581, 998, 1557, 1610, 2036, 2096, 2301
Tru9I	TTAA	9 cut(s)	537, 558, 581, 998, 1557, 1610, 2036, 2096, 2301
TscAI	CASTG	4 cut(s)	628, 664, 1761, 1796
TseFI	GTSAC	4 cut(s)	316, 971, 1463, 2364
Tsp45I	GTSAC	4 cut(s)	316, 971, 1463, 2364
TspGWI	ACGGA	2 cut(s)	749, 2155
TspRI	CASTG	4 cut(s)	628, 664, 1761, 1796
Van91I	CCANNNNNTGG	2 cut(s)	184, 2021
Vha464I	CTTAAG	1 cut(s)	1556
VneI	GTGCAC	1 cut(s)	655
VpaK11BI	GGWCC	1 cut(s)	1429
VspI	ATTAAT	1 cut(s)	537
XapI	RAATTY	6 cut(s)	1221, 1303, 1351, 1717, 1915, 2098
XceI	RCATGY	5 cut(s)	184, 1006, 1331, 1471, 1492
XcmI	CCANNNNNNNNNTGG	3 cut(s)	362, 946, 2035
XmiI	GTMKAC	1 cut(s)	1373
XmnI	GAANNNNTTC	1 cut(s)	8
XspI	CTAG	3 cut(s)	689, 1938, 2439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.