Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0004423

Physical Location & Seq

Genomic Coordinates Reverse (-)

6260100 .. 6270931

Gene Structure 10832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1089300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2631 bp

ATGAATCCCTTCTCGTCCGGCACGCGCCTGAGGGACATGATTCGGGCTATACGTGCTTGCAAAACTGCAGCGGAGGAACGTGCTGTTGTTAGAAAAGAGTGTGCTGCTATTCGTGCATCCATAAACGAAAATGATCATGACTACAGGCATCGTAACCTTGCTAAGCTCATGTTCATCCACATGCTGGGTTATCCCACACATTTTGGTCAAATGGAGTGCCTGAAATTGATTGCATCTGCTGGTTTTCCTGAGAAGAGAATAGGGTATCTTGGCCTCATGCTGCTTCTTGATGAAAGACAAGAAGTTCTGATGTTGGTCACAAACTCATTGAAACAAGATCTCAATCACACCAACCAATATATTGTGGGACTTGCTCTTTGTGCTCTGGGAAATATTTGTTCAGCTGAAATGGCTCGTGATCTTGCACCAGAAGTGGAAAGGTTGCTGCAATTTCGAGATCCAAATATCCGAAAAAAGGCAGCATTGTGCTCTATAAGGATTATAAGGAAAGTCCCTGAGCTGGCGGAAAATTTCATTAATCCTGCTGCTACGTTACTTAAAGAAAAGCATCATGGTGTTTTAATAACAGGGGTTCAACTTTGTACAGATCTTTGTAAAGTCAGTGAAGAAGCCCTTGAATATTTCAGAAAGAAGTGCACCGAGGGCTTGGTAAAAACACTTAAGGATGTAGTGAATAGTCCATATGCCCCTGAGTATGACATTGCTGGGATCGCAGATCCTTTCCTGCATATTAGATTGCTAAAGCTTTTACGTGTGTTGGGCCAAGGAGATGCGGATGCTAGTGAATGTATGAATGACATACTTGCCCAGGTGGCGACAAAAACCGAGTCAAACAAAAATGCAGGAAATGCAATCCTATATGAATGTGTTGAAACTATCATGAGCATTGAAGATAGTGGTGGCTTACGTGTGCTTGCCATCAATATCTTGGGAAGATTCTTATCAAATCGTGACAACAATATCAGATATGTTGCATTAAACATGCTGATGAAGGCAATTACAGTTGATGCTCAAGCTGTGCAGAGGCATCGGGCAACTATCTTGGAATGTGTAAAGGATTCAGATGCCTCAATTCGGAAGAGGGCCCTTGAGCTTGTTTATGTGCTTGTGAATGAGAGCAATGTGAAACCTCTAACAAAAGAGCTTATTGACTATTTGGAAGTAAGTGATGAAGAATTCAAGGGAGATCTTACTGCAAAAATTTGCTCCATTGTTACAAAGTTTTCCCCCGAGAAGATTTGGTACATTGACCAGATGCTTAAGGTTCTCTCTGAGGCTGGAAATTTTGTAAAAGATGAAGTATGGCACGCACTTATTGTTGTGATTAGCAATGCTTCTGATCTCCATGGATATACAGTTAGGGTGTTATACCGAGCATTCCAATTATCAGCTGAACAGGAAAGTCTTGTTCGAGTAGCAATTTGGTGCATTGGAGAATACGGTGACATGTTGGTTAACAATGTTGGCATGCTCGATATAGAGGACCCAATAACAGTAACAGAGTCTGATGCTGTGGATGTTATAGAGGTTGCAATTAAGCATCATACCTCGGATCTAACTACCAAATCAATGGGTTTGATTGCTCTGTTGAAACTATCTTCGCGTTTCCCATCTTGTTCAGAGAGGATCAAGGATATAGTTGTTCAATACAAAGGAAGCCTTGTCCTTGAATTGCAGCAAAGATCCATTGAATTGAACTCTATTATTGCAAAGCATCAGAACATTAGATCTACACTGGTTGAAAGGATGCCAGTTTTGGATGAGGCAACTTTCATCGGAAAGAAGGCTGGTTCAATGCAATCTACTGTTTCTTCTCCTGTTGGTGCTTCAATCAATCTGCCAAATGGAGTTGCCAAACCTTCTGCAGCTCCTCTTGTGGATCTACTTGATCTAGGTTCAGATGATGTGCCAGCACCTAGCTCCTCTGGTGGTGATTTGCTTCATGATCTTCTTGGTGTTGATTTGGCACCAGCTTCTAAACAATCTGGTGTAAATCATTCTCTAAATAATAATGGCACCGATGTTCTACTGGATCTCTTGTCTATCGGTTCACCTACACAAAGCAGCTCATCTCTACCAGATATGTTATCCTCCAGTCAAGGAAACAAAACACCTGTTTCACCATTAGGACTAGCAGCTCCATCTTCAAATTCAATACAAGCCACTTCTTCTGCGGGAGCTGCCCCTGTGATTGATTTGTTGGATGGCTTTGCTGCTAGCACCCCAAAACATGAAAACAATGGCACAGCTTATCCATCTGTAGTGGCATTTGAAAGCAGCAACTTAAGGATGGTTTTCAACTTCTCAAAGCAGCCTGGAAATCCACAAACAACAGTGATCGAGGCTACATTCACAAATTTGTCCGCTAATGTCTATACAGATTTTATTTTTCAGGCAGCTGTTCCAAAGTTTCTTCAATTGCACTTAGAACCGGCTAGTAGCAATACTTTGCCCGCAAGTGGTAATGGGTCCGTCACACAAACTTTGAGAGTTACCAACAGCCAACTTGGAAAGAAATCGCTTGTCATGCGCATACGGATAGCTTACAAGATGAACAACAAAGATGTCTTGGAGGAAGGACAAATCAGTAAATTTCCGCCGGGTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0006810 GO:0008150 GO:0012505 GO:0012506 GO:0012510 GO:0016020 GO:0016192 GO:0030117 GO:0030118 GO:0030119 GO:0030120 GO:0030121 GO:0030125 GO:0030130 GO:0030131 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0048475 GO:0051179 GO:0051234 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

Adaptin_N Alpha_adaptinC2

Protein Analysis

877

Amino Acids

95.71

Weight (kDa)

6.11

Isoelectric Point (pI)

42.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Adaptin_N	PF01602	26 - 579	4.1e-151	Adaptin N terminal region
Alpha_adaptinC2	PF02883	760 - 873	1.7e-31	Adaptin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004423)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23900 AT1G23900 AT1G23900 AT1G60070 AT1G60070
fragaria_vesca	FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830
malus_domestica	MD13G1089300.v1.1 MD16G1089500.v1.1
prunus_persica	Prupe.1G256500_v2.0.a1
pyrus_communis	pycom13g07770 pycom16g07660
rosa_chinensis	RchiOBHm_Chr4g0444171
rosa_laevigata	RLG00000005850
rosa_multiflora	Rmu_sc0034408.1_g000001 Rmu_ssc0000462.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384760
rosa_rugosa	Rorug04G0350700 Rorug04G0350700
rosa_samantha	Rh4AG411400 Rh4BG422800 Rh4CG154500 Rh4CG437100 Rh4DG418100
rosa_wichuraiana	Rw4G035340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	503
Acc16I	TGCGCA	1 cut(s)	2552
AccB1I	GGYRCC	2 cut(s)	1987, 2036
AccB7I	CCANNNNNTGG	1 cut(s)	184
AccII	CGCG	2 cut(s)	25, 1624
AciI	CCGC	7 cut(s)	71, 524, 794, 2195, 2385, 2475, 2618
AclWI	GGATC	8 cut(s)	452, 731, 737, 1581, 1655, 1698, 1908, 2061
AcsI	RAATTY	7 cut(s)	529, 1196, 1221, 1303, 2170, 2377, 2612
AfaI	GTAC	2 cut(s)	604, 1265
AfiI	CCNNNNNNNGG	5 cut(s)	184, 475, 520, 1095, 2480
AflII	CTTAAG	3 cut(s)	680, 1280, 2305
AflIII	ACRYGT	3 cut(s)	772, 928, 1467
AjnI	CCWGG	2 cut(s)	828, 2335
Alw21I	GWGCWC	3 cut(s)	385, 491, 659
Alw44I	GTGCAC	1 cut(s)	655
AlwI	GGATC	8 cut(s)	452, 731, 737, 1581, 1655, 1698, 1908, 2061
AlwNI	CAGNNNCTG	1 cut(s)	1526
Ama87I	CYCGRG	1 cut(s)	1250
AoxI	GGCC	3 cut(s)	271, 781, 1104
ApaI	GGGCCC	1 cut(s)	1108
ApaLI	GTGCAC	1 cut(s)	655
ApoI	RAATTY	7 cut(s)	529, 1196, 1221, 1303, 2170, 2377, 2612
ArsI	GACNNNNNNTTYG	4 cut(s)	360, 392, 833, 865
AseI	ATTAAT	1 cut(s)	537
Asp700I	GAANNNNTTC	1 cut(s)	8
AspLEI	GCGC	2 cut(s)	27, 2553
AspS9I	GGNCC	5 cut(s)	781, 1104, 1105, 1504, 2490
AsuC2I	CCSGG	1 cut(s)	2622
AsuHPI	GGTGA	4 cut(s)	1475, 1964, 2064, 2133
AsuNHI	GCTAGC	1 cut(s)	2237
AvaI	CYCGRG	1 cut(s)	1250
AvaII	GGWCC	2 cut(s)	1504, 2490
AxyI	CCTNAGG	1 cut(s)	29
BaeGI	GKGCMC	2 cut(s)	659, 1108
BanI	GGYRCC	2 cut(s)	1987, 2036
BanII	GRGCYC	1 cut(s)	1108
BarI	GAAGNNNNNNTAC	2 cut(s)	1247, 1279
BauI	CACGAG	1 cut(s)	414
Bbv12I	GWGCWC	3 cut(s)	385, 491, 659
BccI	CCATC	6 cut(s)	947, 1639, 2170, 2219, 2284, 2305
BcgI	CGANNNNNNTGC	2 cut(s)	1031, 1065
BciT130I	CCWGG	2 cut(s)	830, 2337
BclI	TGATCA	1 cut(s)	133
BcnI	CCSGG	1 cut(s)	2622
BfaI	CTAG	6 cut(s)	801, 1913, 1938, 2153, 2238, 2457
BfmI	CTRYAG	4 cut(s)	66, 142, 1884, 2280
BfrI	CTTAAG	3 cut(s)	680, 1280, 2305
BglI	GCCNNNNNGGC	1 cut(s)	833
BglII	AGATCT	4 cut(s)	337, 607, 1207, 1748
BlpI	GCTNAGC	1 cut(s)	162
Bme1390I	CCNGG	3 cut(s)	830, 2337, 2622
Bme18I	GGWCC	2 cut(s)	1504, 2490
BmeT110I	CYCGRG	1 cut(s)	1250
BmgT120I	GGNCC	5 cut(s)	781, 1104, 1105, 1504, 2490
BmiI	GGNNCC	5 cut(s)	1106, 1506, 1989, 2038, 2491
BmrFI	CCNGG	3 cut(s)	830, 2337, 2622
BmtI	GCTAGC	1 cut(s)	2241
BpmI	CTGGAG	1 cut(s)	2098
Bpu10I	CCTNAGC	1 cut(s)	516
Bpu1102I	GCTNAGC	1 cut(s)	162
BpuEI	CTTGAG	2 cut(s)	1017, 1130
BpuMI	CCSGG	1 cut(s)	2622
BsaAI	YACGTR	3 cut(s)	53, 773, 929
BsaBI	GATNNNNATC	2 cut(s)	342, 961
BsaJI	CCNNGG	5 cut(s)	660, 784, 828, 1366, 1569
Bsc4I	CCNNNNNNNGG	5 cut(s)	184, 475, 520, 1095, 2480
Bse118I	RCCGGY	1 cut(s)	2452
Bse1I	ACTGG	4 cut(s)	1761, 1772, 2055, 2115
Bse21I	CCTNAGG	1 cut(s)	29
Bse3DI	GCAATG	3 cut(s)	720, 1147, 1357
Bse8I	GATNNNNATC	2 cut(s)	342, 961
BseBI	CCWGG	2 cut(s)	830, 2337
BseDI	CCNNGG	5 cut(s)	660, 784, 828, 1366, 1569
BseGI	GGATG	9 cut(s)	116, 174, 691, 802, 1543, 1773, 1786, 2230, 2316
BseJI	GATNNNNATC	2 cut(s)	342, 961
BseLI	CCNNNNNNNGG	5 cut(s)	184, 475, 520, 1095, 2480
BseMI	GCAATG	3 cut(s)	720, 1147, 1357
BseMII	CTCAG	5 cut(s)	20, 240, 507, 702, 1284
BseNI	ACTGG	4 cut(s)	1761, 1772, 2055, 2115
BseRI	GAGGAG	2 cut(s)	1881, 1933
BseSI	GKGCMC	2 cut(s)	659, 1108
BseYI	CCCAGC	2 cut(s)	184, 725
BsgI	GTGCAG	1 cut(s)	1061
Bsh1236I	CGCG	2 cut(s)	25, 1624
BshFI	GGCC	3 cut(s)	273, 783, 1106
BshNI	GGYRCC	2 cut(s)	1987, 2036
BsiHKAI	GWGCWC	3 cut(s)	385, 491, 659
BsiHKCI	CYCGRG	1 cut(s)	1250
BsiSI	CCGG	3 cut(s)	18, 2453, 2621
BslFI	GGGAC	3 cut(s)	47, 381, 497
BslI	CCNNNNNNNGG	5 cut(s)	184, 475, 520, 1095, 2480
BsmFI	GGGAC	3 cut(s)	47, 381, 497
BsmI	GAATGC	1 cut(s)	1397
BsnI	GGCC	3 cut(s)	273, 783, 1106
BsoBI	CYCGRG	1 cut(s)	1250
Bsp120I	GGGCCC	1 cut(s)	1104
Bsp1286I	GDGCHC	4 cut(s)	385, 491, 659, 1108
Bsp1407I	TGTACA	1 cut(s)	602
Bsp1720I	GCTNAGC	1 cut(s)	162
Bsp19I	CCATGG	1 cut(s)	1366
BspACI	CCGC	7 cut(s)	71, 524, 794, 2195, 2385, 2475, 2618
BspANI	GGCC	3 cut(s)	273, 783, 1106
BspCNI	CTCAG	5 cut(s)	21, 241, 508, 703, 1285
BspFNI	CGCG	2 cut(s)	25, 1624
BspHI	TCATGA	3 cut(s)	136, 900, 1963
BspLI	GGNNCC	5 cut(s)	1106, 1506, 1989, 2038, 2491
BspMAI	CTGCAG	2 cut(s)	70, 1888
BspOI	GCTAGC	1 cut(s)	2241
BspPI	GGATC	8 cut(s)	452, 731, 737, 1581, 1655, 1698, 1908, 2061
BspT107I	GGYRCC	2 cut(s)	1987, 2036
BspTI	CTTAAG	3 cut(s)	680, 1280, 2305
BsrDI	GCAATG	3 cut(s)	720, 1147, 1357
BsrFI	RCCGGY	1 cut(s)	2452
BsrGI	TGTACA	1 cut(s)	602
BsrI	ACTGG	4 cut(s)	1761, 1772, 2055, 2115
BssAI	RCCGGY	1 cut(s)	2452
BssECI	CCNNGG	5 cut(s)	660, 784, 828, 1366, 1569
BssSI	CACGAG	1 cut(s)	414
BssT1I	CCWWGG	2 cut(s)	784, 1366
Bst2BI	CACGAG	1 cut(s)	414
Bst2UI	CCWGG	2 cut(s)	830, 2337
Bst4CI	ACNGT	6 cut(s)	1024, 1378, 1463, 1516, 1828, 2356
Bst6I	CTCTTC	2 cut(s)	248, 1094
BstAFI	CTTAAG	3 cut(s)	680, 1280, 2305
BstAPI	GCANNNNNTGC	1 cut(s)	869
BstAUI	TGTACA	1 cut(s)	602
BstBAI	YACGTR	3 cut(s)	53, 773, 929
BstC8I	GCNNGC	9 cut(s)	23, 58, 522, 936, 1329, 1490, 1932, 2239, 2475
BstDEI	CTNAG	7 cut(s)	29, 162, 249, 516, 711, 1293, 2446
BstDSI	CCRYGG	1 cut(s)	1366
BstF5I	GGATG	9 cut(s)	116, 174, 691, 802, 1543, 1773, 1786, 2230, 2316
BstFNI	CGCG	2 cut(s)	25, 1624
BstHHI	GCGC	2 cut(s)	27, 2553
BstNI	CCWGG	2 cut(s)	830, 2337
BstNSI	RCATGY	4 cut(s)	184, 1006, 1471, 1492
BstSCI	CCNGG	3 cut(s)	828, 2335, 2620
BstSFI	CTRYAG	4 cut(s)	66, 142, 1884, 2280
BstSLI	GKGCMC	2 cut(s)	659, 1108
BstUI	CGCG	2 cut(s)	25, 1624
BstXI	CCANNNNNNTGG	1 cut(s)	1591
Bsu36I	CCTNAGG	1 cut(s)	29
BsuRI	GGCC	3 cut(s)	273, 783, 1106
BtgI	CCRYGG	1 cut(s)	1366
BtsCI	GGATG	9 cut(s)	116, 174, 691, 802, 1543, 1773, 1786, 2230, 2316
BtsIMutI	CAGTG	3 cut(s)	628, 1754, 2361
Cac8I	GCNNGC	9 cut(s)	23, 58, 522, 936, 1329, 1490, 1932, 2239, 2475
CaiI	CAGNNNCTG	1 cut(s)	1526
CciI	TCATGA	3 cut(s)	136, 900, 1963
CfoI	GCGC	2 cut(s)	27, 2553
Cfr10I	RCCGGY	1 cut(s)	2452
Cfr13I	GGNCC	5 cut(s)	781, 1104, 1105, 1504, 2490
Csp6I	GTAC	2 cut(s)	603, 1264
CspCI	CAANNNNNGTGG	2 cut(s)	184, 219
CviQI	GTAC	2 cut(s)	603, 1264
DdeI	CTNAG	7 cut(s)	29, 162, 249, 516, 711, 1293, 2446
Eam1104I	CTCTTC	2 cut(s)	248, 1094
EarI	CTCTTC	2 cut(s)	248, 1094
EciI	GGCGGA	2 cut(s)	539, 2607
Eco130I	CCWWGG	2 cut(s)	784, 1366
Eco24I	GRGCYC	1 cut(s)	1108
Eco47I	GGWCC	2 cut(s)	1504, 2490
Eco81I	CCTNAGG	1 cut(s)	29
Eco88I	CYCGRG	1 cut(s)	1250
EcoO109I	RGGNCCY	3 cut(s)	1104, 1105, 1504
EcoRI	GAATTC	1 cut(s)	1196
EcoRII	CCWGG	2 cut(s)	828, 2335
EcoT14I	CCWWGG	2 cut(s)	784, 1366
EcoT38I	GRGCYC	1 cut(s)	1108
ErhI	CCWWGG	2 cut(s)	784, 1366
FalI	AAGNNNNNCTT	4 cut(s)	618, 650, 1665, 1697
FaqI	GGGAC	3 cut(s)	47, 381, 497
FauI	CCCGC	2 cut(s)	2188, 2482
FauNDI	CATATG	1 cut(s)	703
FbaI	TGATCA	1 cut(s)	133
FokI	GGATG	9 cut(s)	103, 161, 698, 809, 1550, 1780, 1793, 2237, 2323
FriOI	GRGCYC	1 cut(s)	1108
FspAI	RTGCGCAY	1 cut(s)	2552
FspBI	CTAG	6 cut(s)	801, 1913, 1938, 2153, 2238, 2457
FspI	TGCGCA	1 cut(s)	2552
GlaI	GCGC	2 cut(s)	26, 2552
GsaI	CCCAGC	2 cut(s)	188, 729
GsuI	CTGGAG	1 cut(s)	2098
HaeIII	GGCC	3 cut(s)	273, 783, 1106
HapII	CCGG	3 cut(s)	18, 2453, 2621
HhaI	GCGC	2 cut(s)	27, 2553
Hin6I	GCGC	2 cut(s)	25, 2551
HinP1I	GCGC	2 cut(s)	25, 2551
HincII	GTYRAC	1 cut(s)	1477
HindII	GTYRAC	1 cut(s)	1477
HindIII	AAGCTT	1 cut(s)	764
HinfI	GANTC	6 cut(s)	4, 40, 848, 957, 1079, 1523
HpaI	GTTAAC	1 cut(s)	1477
HpaII	CCGG	3 cut(s)	18, 2453, 2621
HphI	GGTGA	4 cut(s)	1475, 1964, 2064, 2133
Hpy166II	GTNNAC	3 cut(s)	657, 1477, 2072
Hpy188III	TCNNGA	8 cut(s)	137, 248, 287, 416, 455, 901, 971, 1964
Hpy8I	GTNNAC	3 cut(s)	657, 1477, 2072
HpyAV	CCTTC	5 cut(s)	19, 1006, 1798, 1890, 2591
HpyCH4III	ACNGT	6 cut(s)	1024, 1378, 1463, 1516, 1828, 2356
HpyCH4IV	ACGT	5 cut(s)	52, 79, 551, 772, 928
HpyF3I	CTNAG	7 cut(s)	29, 162, 249, 516, 711, 1293, 2446
HpySE526I	ACGT	5 cut(s)	52, 79, 551, 772, 928
HspAI	GCGC	2 cut(s)	25, 2551
Ksp22I	TGATCA	1 cut(s)	133
KspAI	GTTAAC	1 cut(s)	1477
LmnI	GCTCC	5 cut(s)	1232, 1894, 1946, 2164, 2198
MaeI	CTAG	6 cut(s)	801, 1913, 1938, 2153, 2238, 2457
MaeII	ACGT	5 cut(s)	52, 79, 551, 772, 928
MaeIII	GTNAC	9 cut(s)	152, 316, 552, 971, 1234, 1463, 1516, 2494, 2512
MfeI	CAATTG	1 cut(s)	2438
MhlI	GDGCHC	4 cut(s)	385, 491, 659, 1108
MlyI	GAGTC	2 cut(s)	857, 1532
MmeI	TCCRAC	1 cut(s)	2202
MroXI	GAANNNNTTC	1 cut(s)	8
MseI	TTAA	9 cut(s)	537, 558, 581, 681, 998, 1281, 1476, 1557, 2306
MslI	CAYNNNNRTG	3 cut(s)	179, 573, 1007
MspA1I	CMGCKG	4 cut(s)	71, 404, 1412, 2420
MspCI	CTTAAG	3 cut(s)	680, 1280, 2305
MspI	CCGG	3 cut(s)	18, 2453, 2621
MspR9I	CCNGG	3 cut(s)	830, 2337, 2622
MunI	CAATTG	1 cut(s)	2438
Mva1269I	GAATGC	1 cut(s)	1397
MvaI	CCWGG	2 cut(s)	830, 2337
MvnI	CGCG	2 cut(s)	25, 1624
NciI	CCSGG	1 cut(s)	2622
NcoI	CCATGG	1 cut(s)	1366
NdeI	CATATG	1 cut(s)	703
NheI	GCTAGC	1 cut(s)	2237
NlaIV	GGNNCC	5 cut(s)	1106, 1506, 1989, 2038, 2491
NmuCI	GTSAC	4 cut(s)	316, 971, 1463, 2494
NsbI	TGCGCA	1 cut(s)	2552
NspI	RCATGY	4 cut(s)	184, 1006, 1471, 1492
PaeI	GCATGC	1 cut(s)	1492
PagI	TCATGA	3 cut(s)	136, 900, 1963
PciI	ACATGT	1 cut(s)	1467
PcsI	WCGNNNNNNNCGW	1 cut(s)	49
PctI	GAATGC	1 cut(s)	1397
PdmI	GAANNNNTTC	1 cut(s)	8
PfeI	GAWTC	4 cut(s)	4, 40, 957, 1079
PflMI	CCANNNNNTGG	1 cut(s)	184
PleI	GAGTC	2 cut(s)	856, 1531
PpsI	GAGTC	2 cut(s)	856, 1531
Ppu21I	YACGTR	3 cut(s)	53, 773, 929
PpuMI	RGGWCCY	1 cut(s)	1504
PscI	ACATGT	1 cut(s)	1467
PshBI	ATTAAT	1 cut(s)	537
PsiI	TTATAA	1 cut(s)	503
Psp5II	RGGWCCY	1 cut(s)	1504
Psp6I	CCWGG	2 cut(s)	828, 2335
PspFI	CCCAGC	2 cut(s)	184, 725
PspGI	CCWGG	2 cut(s)	828, 2335
PspN4I	GGNNCC	5 cut(s)	1106, 1506, 1989, 2038, 2491
PspOMI	GGGCCC	1 cut(s)	1104
PspPI	GGNCC	5 cut(s)	781, 1104, 1105, 1504, 2490
PspPPI	RGGWCCY	1 cut(s)	1504
PstI	CTGCAG	2 cut(s)	70, 1888
PstNI	CAGNNNCTG	1 cut(s)	1526
PvuII	CAGCTG	3 cut(s)	404, 1412, 2420
RsaI	GTAC	2 cut(s)	604, 1265
RsaNI	GTAC	2 cut(s)	603, 1264
RseI	CAYNNNNRTG	3 cut(s)	179, 573, 1007
SaqAI	TTAA	9 cut(s)	537, 558, 581, 681, 998, 1281, 1476, 1557, 2306
Sau96I	GGNCC	5 cut(s)	781, 1104, 1105, 1504, 2490
SchI	GAGTC	2 cut(s)	857, 1532
ScrFI	CCNGG	3 cut(s)	830, 2337, 2622
SduI	GDGCHC	4 cut(s)	385, 491, 659, 1108
SfcI	CTRYAG	4 cut(s)	66, 142, 1884, 2280
SinI	GGWCC	2 cut(s)	1504, 2490
SmiMI	CAYNNNNRTG	3 cut(s)	179, 573, 1007
SmlI	CTYRAG	5 cut(s)	680, 1032, 1109, 1280, 2305
SmoI	CTYRAG	5 cut(s)	680, 1032, 1109, 1280, 2305
SphI	GCATGC	1 cut(s)	1492
SsiI	CCGC	7 cut(s)	71, 524, 794, 2195, 2385, 2475, 2618
SspI	AATATT	2 cut(s)	394, 641
SspMI	CTAG	6 cut(s)	801, 1913, 1938, 2153, 2238, 2457
StyD4I	CCNGG	3 cut(s)	828, 2335, 2620
StyI	CCWWGG	2 cut(s)	784, 1366
TaaI	ACNGT	6 cut(s)	1024, 1378, 1463, 1516, 1828, 2356
TaiI	ACGT	5 cut(s)	55, 82, 554, 775, 931
TaqI	TCGA	4 cut(s)	454, 1432, 1494, 2361
TatI	WGTACW	1 cut(s)	602
TfiI	GAWTC	4 cut(s)	4, 40, 957, 1079
Tru1I	TTAA	9 cut(s)	537, 558, 581, 681, 998, 1281, 1476, 1557, 2306
Tru9I	TTAA	9 cut(s)	537, 558, 581, 681, 998, 1281, 1476, 1557, 2306
TscAI	CASTG	3 cut(s)	628, 1761, 2361
TseFI	GTSAC	4 cut(s)	316, 971, 1463, 2494
Tsp45I	GTSAC	4 cut(s)	316, 971, 1463, 2494
TspGWI	ACGGA	2 cut(s)	2482, 2572
TspRI	CASTG	3 cut(s)	628, 1761, 2361
Van91I	CCANNNNNTGG	1 cut(s)	184
Vha464I	CTTAAG	3 cut(s)	680, 1280, 2305
VneI	GTGCAC	1 cut(s)	655
VpaK11BI	GGWCC	2 cut(s)	1504, 2490
VspI	ATTAAT	1 cut(s)	537
XapI	RAATTY	7 cut(s)	529, 1196, 1221, 1303, 2170, 2377, 2612
XceI	RCATGY	4 cut(s)	184, 1006, 1471, 1492
XcmI	CCANNNNNNNNNTGG	1 cut(s)	946
XmnI	GAANNNNTTC	1 cut(s)	8
XspI	CTAG	6 cut(s)	801, 1913, 1938, 2153, 2238, 2457

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.