Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0004423

Physical Location & Seq

Genomic Coordinates Forward (+)

56722429 .. 56733474

Gene Structure 11046 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG422800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2628 bp

ATGTTTTGTGGTATGTGCTTACTGTTTTATTGCAGGGACATGATTCGGGCTATACGTGCTTGCAAAACTGCAGCAGAGGAACGTGGTGTTGTAAGAAAAGAGTGTGCTGCTATTCGTGCTGCCATAAATGAAAATGATAATGACTACAGGCACCGTAACCTGGCTAAGCTCATGTTCATCCACATGCTGGGATACCCTACACATTTTGGTCAAATGGAGTGCCTGAAGTTGATCGCGTCTGCTGGTTTTCCTGAGAAGAGAATAGGGTATCTTGGCCTCATGCTGCTTCTCGATGAAAGACAAGAAGTTCTGATGTTGGTCACAAACTCGTTGAAACAAGATCTGAATCACTCAAACCAGTATATTGTCGGACTTGCTCTTTGTGCTATGGGAAATATTTGTTCAGCAGAGATGGCTCGTGATCTTGCACCAGAAGTAGAGAGATTGCTACAATTTCGAGATCCAAATATCCGGAAAAAGGCAGCATTGTGCTCCATAAGGATTATAAAGAAAGTCCCTGAACTGGCGGAAAATTTTATTAATCCTGCTGCTGCCTTACTTAGAGAAAAGCATCATGGCGTTTTAATCACAGGAGTTCAACTTTGTACAGAGCTTTGTAAAGCCAGTGAAGAAGCGCTCGAATACTTTAGAATGAAGTGCACAGAGGGTTTGGTCAAGACACTAAAGGATCTAGTGAACAGCCCATATGCTCCTGAGTACGACATTGCTGGGATCACGGATCCTTTCCTCCATATTAGATTGCTAAAGCTTTTGCGTGTGTTGGGTCAAGGAGATGAGGATGCTAGTGAATGTATGAATGACATACTTGCCCAGGTGGCTACCAAAACTGAGTCAAACAAAAATGCAGGGAATGCAATTCTATACGAATGTGTAGCAACTATAATGAGCATCGAAGACAATGGTGGCTTACGTGTGCTTGCCATCAATATTTTGGGAAGATTTTTATCGAATCGTGACAATAATATCAGATATGTTGCGTTAAACATGTTGATGAGAGCCATTACAGTTGATGCTCAAGCTGTACAGAGGCATCGGGCAACTATCTTGGAATGTGTAAAGGATTTAGATGCTTCAATTCGTAAAAGGGCCCTTGAACTTGTTTATGTTCTTGTGAATGAAAGTAACGTGAAACCTCTAACAAAAGAGCTCATTGACTATTTGGAAGTAAGTGATCAAGATTTCAAGGGAGATCTTACAGCAAAAATTTGCTCCCTTGTTAAGAAGTTTTCCCCTGAGAAGATTTGGTACATTGATCAGATGCTGAAGGTTCTCTCTGAGGCTGGAAATTTTGTAAAAGATGAAGTATGGCACGCAGTTATTGTTGTGATAACCAATTCACCTGATCTTCATGGGTATGCGGTTAGGGCTTTATACAGAGCACTCCAAACATCAGCTGATCAGGAAACTTTGGTTCGAGTAGCAGTTTGGTGCATCGGAGAATATGGTGACATGTTGGTAAATAATATTGGCATGCTTGATGTAGAGGATCCCATAACGGTAACAGAGAGTGATGCTGTGGATATCATAGAAATTGCCCTTAAGCACCATACCTCGGATCTTACTACCAAAGCTATGGCTTTGATTGCTCTCTTAAAGCTATCTTCACGTTTCCCATCTTGTTCAGAGAGGATCAAAGAAATCGTAGTTCAGTACAAAGGAAGCCTTGTGCTTGAATTGCAGCAAAGATCCATTGAATTAAATTCTATTATTGCGAAGCATCAGAACATTAGATCTACACTGGTTGAGAGGATGCCAACTTTGGATTTGTTAGAGTGGGAGGAAAAGCAGAGTGGTTCTATACCAAATACTACTGGTTCAACTCCTGCTCATGCTTCAATCAACATACCAAATGGAGTTGCCAAACCTTCTTCAGCTCCTCTTGTGGATTTACTTGATCTAAATTCAGATGATGTGCCAGCACCTAGCTCCTCTGGTGGTGATTCTTTTCATGGTCTTCTTGATATTGATTTGTCAGGAGCTCCTAAACAATCGGGTGTAAATCATTCTCCAAACAATGGCACTGATGCTCTAATGGATCTCTTGTCTACTGCTACACCTACACAAAGCAGCTCAGCTATCTCTGATCTGTTAAACTCTGGTCAAGATAACAAAACACCTGTTTCACCATTAGAGGTACTATCATCTCCATCTTCGAACTCCATACAACCCACTTCTTCGGCTGGAGCTATAGATTTGCTGGACAGCTTTGCCACCAACTCACCAATACAAGAAAACAATGGCCCTGCGTATCCATCTGTAGTGGCATTTGAGAGCAGCAATTTAAGGATAGGGTTTAACTTCTCGAAGCTGCCTGGAAATCCACAAACAACAATAATCAAGGCTACATTCACTAATTTGTCACCTAGCGTCTATACAGATTTTATTTTTCAGGCAGCTGTTCCAAAGTTCCTGCAACTGCACTTAGAGCCAGCTAGCGGCAATACTCTTCCGGCAAGTGGTAATGAGTCCATCACACAGACTTTGAGAGTTACCAATAGCCAACATGGAAAGAAAAGTCTTGTCATGCGCATAAGGATAGCTTACAAGATGAACAACAAAGATGTCTTGGAGGAAGGACAAATCAACAATTTTCCCCAGGGTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0006810 GO:0008150 GO:0012505 GO:0012506 GO:0012510 GO:0016020 GO:0016192 GO:0030117 GO:0030118 GO:0030119 GO:0030120 GO:0030121 GO:0030125 GO:0030130 GO:0030131 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0048475 GO:0051179 GO:0051234 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

Adaptin_N Alpha_adaptinC2

Protein Analysis

875

Amino Acids

96.27

Weight (kDa)

5.74

Isoelectric Point (pI)

44.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Adaptin_N	PF01602	28 - 580	6.2e-154	Adaptin N terminal region
Alpha_adaptinC2	PF02883	759 - 872	2.2e-33	Adaptin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004423)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23900 AT1G23900 AT1G23900 AT1G60070 AT1G60070
fragaria_vesca	FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830 FvH4_4g34830
malus_domestica	MD13G1089300.v1.1 MD16G1089500.v1.1
prunus_persica	Prupe.1G256500_v2.0.a1
pyrus_communis	pycom13g07770 pycom16g07660
rosa_chinensis	RchiOBHm_Chr4g0444171
rosa_laevigata	RLG00000005850
rosa_multiflora	Rmu_sc0034408.1_g000001 Rmu_ssc0000462.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384760
rosa_rugosa	Rorug04G0350700 Rorug04G0350700
rosa_samantha	Rh4AG411400 Rh4BG422800 Rh4CG154500 Rh4CG437100 Rh4DG418100
rosa_wichuraiana	Rw4G035340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	506
Acc16I	TGCGCA	1 cut(s)	2549
AccB1I	GGYRCC	1 cut(s)	150
AccB7I	CCANNNNNTGG	2 cut(s)	187, 2036
AccI	GTMKAC	1 cut(s)	2066
AccII	CGCG	1 cut(s)	236
AccIII	TCCGGA	1 cut(s)	471
AciI	CCGC	3 cut(s)	527, 1379, 2457
AcsI	RAATTY	5 cut(s)	532, 1224, 1306, 1720, 1921
AcuI	CTGAAG	3 cut(s)	245, 1304, 1875
AfaI	GTAC	6 cut(s)	607, 719, 1044, 1268, 1673, 2157
AfeI	AGCGCT	1 cut(s)	636
AfiI	CCNNNNNNNGG	8 cut(s)	160, 187, 478, 523, 1573, 2036, 2456, 2477
AflII	CTTAAG	1 cut(s)	1559
AflIII	ACRYGT	3 cut(s)	931, 1005, 1470
AgsI	TTSAA	9 cut(s)	334, 599, 1095, 1115, 1204, 1694, 1715, 1839, 1857
AjnI	CCWGG	4 cut(s)	159, 831, 2332, 2616
Alw21I	GWGCWC	5 cut(s)	494, 662, 1170, 1402, 2002
Alw44I	GTGCAC	1 cut(s)	658
AlwNI	CAGNNNCTG	1 cut(s)	1282
Aor13HI	TCCGGA	1 cut(s)	471
Aor51HI	AGCGCT	1 cut(s)	636
AoxI	GGCC	3 cut(s)	274, 1107, 2260
ApaI	GGGCCC	1 cut(s)	1111
ApaLI	GTGCAC	1 cut(s)	658
ApoI	RAATTY	5 cut(s)	532, 1224, 1306, 1720, 1921
ArsI	GACNNNNNNTTYG	2 cut(s)	363, 395
AseI	ATTAAT	1 cut(s)	540
AspLEI	GCGC	2 cut(s)	637, 2550
AspS9I	GGNCC	3 cut(s)	1107, 1108, 2261
AsuHPI	GGTGA	6 cut(s)	1350, 1478, 1970, 2136, 2232, 2373
AsuII	TTCGAA	1 cut(s)	2174
AsuNHI	GCTAGC	1 cut(s)	2453
BaeGI	GKGCMC	2 cut(s)	662, 1111
BamHI	GGATCC	2 cut(s)	739, 1507
BanI	GGYRCC	1 cut(s)	150
BanII	GRGCYC	3 cut(s)	1111, 1170, 2002
BarI	GAAGNNNNNNTAC	2 cut(s)	1250, 1282
BauI	CACGAG	1 cut(s)	417
BbsI	GAAGAC	2 cut(s)	921, 1967
Bbv12I	GWGCWC	5 cut(s)	494, 662, 1170, 1402, 2002
BccI	CCATC	6 cut(s)	406, 950, 1642, 2176, 2281, 2498
BciT130I	CCWGG	4 cut(s)	161, 833, 2334, 2618
BciVI	GTATCC	2 cut(s)	185, 2280
BclI	TGATCA	3 cut(s)	1192, 1273, 1417
BfaI	CTAG	5 cut(s)	692, 804, 1944, 2385, 2454
BfmI	CTRYAG	4 cut(s)	69, 145, 2208, 2277
BfoI	RGCGCY	1 cut(s)	638
BfrI	CTTAAG	1 cut(s)	1559
BfuI	GTATCC	2 cut(s)	185, 2280
BglI	GCCNNNNNGGC	1 cut(s)	836
BglII	AGATCT	3 cut(s)	340, 1210, 1751
BlpI	GCTNAGC	2 cut(s)	165, 2092
Bme1390I	CCNGG	4 cut(s)	161, 833, 2334, 2618
BmgT120I	GGNCC	3 cut(s)	1107, 1108, 2261
BmiI	GGNNCC	4 cut(s)	152, 741, 1109, 1509
BmrFI	CCNGG	4 cut(s)	161, 833, 2334, 2618
BmtI	GCTAGC	1 cut(s)	2457
BpiI	GAAGAC	2 cut(s)	921, 1967
BpmI	CTGGAG	1 cut(s)	2223
Bpu1102I	GCTNAGC	2 cut(s)	165, 2092
Bpu14I	TTCGAA	1 cut(s)	2174
BpuEI	CTTGAG	1 cut(s)	1020
BsaAI	YACGTR	2 cut(s)	56, 932
BsaBI	GATNNNNATC	2 cut(s)	345, 964
BsaJI	CCNNGG	4 cut(s)	831, 1572, 2616, 2617
BsaWI	WCCGGW	1 cut(s)	471
Bsc4I	CCNNNNNNNGG	8 cut(s)	160, 187, 478, 523, 1573, 2036, 2456, 2477
Bse1I	ACTGG	5 cut(s)	358, 528, 624, 1764, 1837
Bse3DI	GCAATG	1 cut(s)	723
Bse8I	GATNNNNATC	2 cut(s)	345, 964
BseAI	TCCGGA	1 cut(s)	471
BseBI	CCWGG	4 cut(s)	161, 833, 2334, 2618
BseDI	CCNNGG	4 cut(s)	831, 1572, 2616, 2617
BseGI	GGATG	3 cut(s)	177, 805, 1776
BseJI	GATNNNNATC	2 cut(s)	345, 964
BseLI	CCNNNNNNNGG	8 cut(s)	160, 187, 478, 523, 1573, 2036, 2456, 2477
BseMI	GCAATG	1 cut(s)	723
BseMII	CTCAG	6 cut(s)	243, 705, 840, 1245, 1287, 2106
BseNI	ACTGG	5 cut(s)	358, 528, 624, 1764, 1837
BseRI	GAGGAG	2 cut(s)	1887, 1939
BseSI	GKGCMC	2 cut(s)	662, 1111
BseYI	CCCAGC	2 cut(s)	187, 728
BsgI	GTGCAG	1 cut(s)	2423
Bsh1236I	CGCG	1 cut(s)	236
BshFI	GGCC	3 cut(s)	276, 1109, 2262
BshNI	GGYRCC	1 cut(s)	150
BsiHKAI	GWGCWC	5 cut(s)	494, 662, 1170, 1402, 2002
BsiSI	CCGG	2 cut(s)	472, 2471
BslFI	GGGAC	2 cut(s)	50, 500
BslI	CCNNNNNNNGG	8 cut(s)	160, 187, 478, 523, 1573, 2036, 2456, 2477
BsmFI	GGGAC	2 cut(s)	50, 500
BsmI	GAATGC	1 cut(s)	877
BsnI	GGCC	3 cut(s)	276, 1109, 2262
Bsp119I	TTCGAA	1 cut(s)	2174
Bsp120I	GGGCCC	1 cut(s)	1107
Bsp1286I	GDGCHC	6 cut(s)	494, 662, 1111, 1170, 1402, 2002
Bsp13I	TCCGGA	1 cut(s)	471
Bsp1407I	TGTACA	2 cut(s)	605, 1042
Bsp1720I	GCTNAGC	2 cut(s)	165, 2092
BspACI	CCGC	3 cut(s)	527, 1379, 2457
BspANI	GGCC	3 cut(s)	276, 1109, 2262
BspCNI	CTCAG	6 cut(s)	244, 706, 841, 1246, 1288, 2105
BspEI	TCCGGA	1 cut(s)	471
BspFNI	CGCG	1 cut(s)	236
BspLI	GGNNCC	4 cut(s)	152, 741, 1109, 1509
BspMAI	CTGCAG	1 cut(s)	73
BspOI	GCTAGC	1 cut(s)	2457
BspT104I	TTCGAA	1 cut(s)	2174
BspT107I	GGYRCC	1 cut(s)	150
BspTI	CTTAAG	1 cut(s)	1559
BsrDI	GCAATG	1 cut(s)	723
BsrGI	TGTACA	2 cut(s)	605, 1042
BsrI	ACTGG	5 cut(s)	358, 528, 624, 1764, 1837
BssECI	CCNNGG	4 cut(s)	831, 1572, 2616, 2617
BssSI	CACGAG	1 cut(s)	417
Bst2BI	CACGAG	1 cut(s)	417
Bst2UI	CCWGG	4 cut(s)	161, 833, 2334, 2618
Bst4CI	ACNGT	4 cut(s)	24, 155, 1027, 1519
Bst6I	CTCTTC	2 cut(s)	251, 2472
BstAFI	CTTAAG	1 cut(s)	1559
BstAPI	GCANNNNNTGC	1 cut(s)	872
BstAUI	TGTACA	2 cut(s)	605, 1042
BstBAI	YACGTR	2 cut(s)	56, 932
BstBI	TTCGAA	1 cut(s)	2174
BstC8I	GCNNGC	7 cut(s)	61, 939, 1332, 1493, 1938, 2451, 2455
BstDEI	CTNAG	9 cut(s)	165, 252, 560, 714, 849, 1254, 1296, 2092, 2443
BstF5I	GGATG	3 cut(s)	177, 805, 1776
BstFNI	CGCG	1 cut(s)	236
BstH2I	RGCGCY	1 cut(s)	638
BstHHI	GCGC	2 cut(s)	637, 2550
BstNI	CCWGG	4 cut(s)	161, 833, 2334, 2618
BstNSI	RCATGY	4 cut(s)	187, 1009, 1474, 1495
BstSCI	CCNGG	4 cut(s)	159, 831, 2332, 2616
BstSFI	CTRYAG	4 cut(s)	69, 145, 2208, 2277
BstSLI	GKGCMC	2 cut(s)	662, 1111
BstUI	CGCG	1 cut(s)	236
BstV2I	GAAGAC	2 cut(s)	921, 1967
BstXI	CCANNNNNNTGG	1 cut(s)	1594
BsuI	GTATCC	2 cut(s)	185, 2280
BsuRI	GGCC	3 cut(s)	276, 1109, 2262
BtsCI	GGATG	3 cut(s)	177, 805, 1776
BtsIMutI	CAGTG	3 cut(s)	631, 1757, 2040
Cac8I	GCNNGC	7 cut(s)	61, 939, 1332, 1493, 1938, 2451, 2455
CaiI	CAGNNNCTG	1 cut(s)	1282
CfoI	GCGC	2 cut(s)	637, 2550
Cfr13I	GGNCC	3 cut(s)	1107, 1108, 2261
CseI	GACGC	2 cut(s)	225, 2377
Csp6I	GTAC	6 cut(s)	606, 718, 1043, 1267, 1672, 2156
CviQI	GTAC	6 cut(s)	606, 718, 1043, 1267, 1672, 2156
DdeI	CTNAG	9 cut(s)	165, 252, 560, 714, 849, 1254, 1296, 2092, 2443
Eam1104I	CTCTTC	2 cut(s)	251, 2472
EarI	CTCTTC	2 cut(s)	251, 2472
EciI	GGCGGA	1 cut(s)	542
Ecl136II	GAGCTC	2 cut(s)	1168, 2000
Eco24I	GRGCYC	3 cut(s)	1111, 1170, 2002
Eco32I	GATATC	1 cut(s)	1543
Eco47III	AGCGCT	1 cut(s)	636
Eco53kI	GAGCTC	2 cut(s)	1168, 2000
Eco57I	CTGAAG	3 cut(s)	245, 1304, 1875
EcoICRI	GAGCTC	2 cut(s)	1168, 2000
EcoO109I	RGGNCCY	2 cut(s)	1107, 1108
EcoRII	CCWGG	4 cut(s)	159, 831, 2332, 2616
EcoRV	GATATC	1 cut(s)	1543
EcoT38I	GRGCYC	3 cut(s)	1111, 1170, 2002
FalI	AAGNNNNNCTT	4 cut(s)	1668, 1700, 2545, 2577
FaqI	GGGAC	2 cut(s)	50, 500
FauNDI	CATATG	1 cut(s)	706
FbaI	TGATCA	3 cut(s)	1192, 1273, 1417
FblI	GTMKAC	1 cut(s)	2066
FokI	GGATG	3 cut(s)	164, 812, 1783
FriOI	GRGCYC	3 cut(s)	1111, 1170, 2002
FspAI	RTGCGCAY	1 cut(s)	2549
FspBI	CTAG	5 cut(s)	692, 804, 1944, 2385, 2454
FspI	TGCGCA	1 cut(s)	2549
GlaI	GCGC	2 cut(s)	636, 2549
GsaI	CCCAGC	2 cut(s)	191, 732
GsuI	CTGGAG	1 cut(s)	2223
HaeII	RGCGCY	1 cut(s)	638
HaeIII	GGCC	3 cut(s)	276, 1109, 2262
HapII	CCGG	2 cut(s)	472, 2471
HgaI	GACGC	2 cut(s)	225, 2377
HhaI	GCGC	2 cut(s)	637, 2550
Hin6I	GCGC	2 cut(s)	635, 2548
HinP1I	GCGC	2 cut(s)	635, 2548
HindIII	AAGCTT	1 cut(s)	767
HinfI	GANTC	6 cut(s)	43, 346, 851, 970, 1961, 2486
HpaII	CCGG	2 cut(s)	472, 2471
HphI	GGTGA	6 cut(s)	1350, 1478, 1970, 2136, 2232, 2373
Hpy166II	GTNNAC	3 cut(s)	660, 697, 2067
Hpy8I	GTNNAC	3 cut(s)	660, 697, 2067
HpyAV	CCTTC	3 cut(s)	1279, 1896, 2588
HpyCH4III	ACNGT	4 cut(s)	24, 155, 1027, 1519
HpyCH4IV	ACGT	5 cut(s)	55, 82, 931, 1146, 1627
HpyF3I	CTNAG	9 cut(s)	165, 252, 560, 714, 849, 1254, 1296, 2092, 2443
HpySE526I	ACGT	5 cut(s)	55, 82, 931, 1146, 1627
HspAI	GCGC	2 cut(s)	635, 2548
Kpn2I	TCCGGA	1 cut(s)	471
Ksp22I	TGATCA	3 cut(s)	1192, 1273, 1417
LmnI	GCTCC	8 cut(s)	497, 715, 1235, 1900, 1952, 1997, 2005, 2204
MaeI	CTAG	5 cut(s)	692, 804, 1944, 2385, 2454
MaeII	ACGT	5 cut(s)	55, 82, 931, 1146, 1627
MaeIII	GTNAC	8 cut(s)	155, 319, 974, 1142, 1466, 1519, 2379, 2509
MhlI	GDGCHC	6 cut(s)	494, 662, 1111, 1170, 1402, 2002
MlyI	GAGTC	2 cut(s)	860, 2495
MmeI	TCCRAC	1 cut(s)	349
MroI	TCCGGA	1 cut(s)	471
MslI	CAYNNNNRTG	3 cut(s)	182, 1010, 1374
MspA1I	CMGCKG	2 cut(s)	1415, 2417
MspCI	CTTAAG	1 cut(s)	1559
MspI	CCGG	2 cut(s)	472, 2471
MspR9I	CCNGG	4 cut(s)	161, 833, 2334, 2618
Mva1269I	GAATGC	1 cut(s)	877
MvaI	CCWGG	4 cut(s)	161, 833, 2334, 2618
MvnI	CGCG	1 cut(s)	236
NdeI	CATATG	1 cut(s)	706
NheI	GCTAGC	1 cut(s)	2453
NlaIV	GGNNCC	4 cut(s)	152, 741, 1109, 1509
NmuCI	GTSAC	4 cut(s)	319, 974, 1466, 2379
NsbI	TGCGCA	1 cut(s)	2549
NspI	RCATGY	4 cut(s)	187, 1009, 1474, 1495
NspV	TTCGAA	1 cut(s)	2174
PaeI	GCATGC	1 cut(s)	1495
PasI	CCCWGGG	1 cut(s)	2617
PciI	ACATGT	2 cut(s)	1005, 1470
PcsI	WCGNNNNNNNCGW	1 cut(s)	52
PctI	GAATGC	1 cut(s)	877
PfeI	GAWTC	4 cut(s)	43, 346, 970, 1961
PflMI	CCANNNNNTGG	2 cut(s)	187, 2036
PleI	GAGTC	2 cut(s)	859, 2494
PpsI	GAGTC	2 cut(s)	859, 2494
Ppu21I	YACGTR	2 cut(s)	56, 932
PscI	ACATGT	2 cut(s)	1005, 1470
PshBI	ATTAAT	1 cut(s)	540
PsiI	TTATAA	1 cut(s)	506
Psp124BI	GAGCTC	2 cut(s)	1170, 2002
Psp6I	CCWGG	4 cut(s)	159, 831, 2332, 2616
PspFI	CCCAGC	2 cut(s)	187, 728
PspGI	CCWGG	4 cut(s)	159, 831, 2332, 2616
PspN4I	GGNNCC	4 cut(s)	152, 741, 1109, 1509
PspOMI	GGGCCC	1 cut(s)	1107
PspPI	GGNCC	3 cut(s)	1107, 1108, 2261
PstI	CTGCAG	1 cut(s)	73
PstNI	CAGNNNCTG	1 cut(s)	1282
PvuII	CAGCTG	2 cut(s)	1415, 2417
RsaI	GTAC	6 cut(s)	607, 719, 1044, 1268, 1673, 2157
RsaNI	GTAC	6 cut(s)	606, 718, 1043, 1267, 1672, 2156
RseI	CAYNNNNRTG	3 cut(s)	182, 1010, 1374
SacI	GAGCTC	2 cut(s)	1170, 2002
Sau96I	GGNCC	3 cut(s)	1107, 1108, 2261
SchI	GAGTC	2 cut(s)	860, 2495
ScrFI	CCNGG	4 cut(s)	161, 833, 2334, 2618
SduI	GDGCHC	6 cut(s)	494, 662, 1111, 1170, 1402, 2002
SfcI	CTRYAG	4 cut(s)	69, 145, 2208, 2277
SfuI	TTCGAA	1 cut(s)	2174
SmiMI	CAYNNNNRTG	3 cut(s)	182, 1010, 1374
SmlI	CTYRAG	2 cut(s)	1035, 1559
SmoI	CTYRAG	2 cut(s)	1035, 1559
SphI	GCATGC	1 cut(s)	1495
SsiI	CCGC	3 cut(s)	527, 1379, 2457
SspI	AATATT	3 cut(s)	397, 949, 1486
SspMI	CTAG	5 cut(s)	692, 804, 1944, 2385, 2454
SstI	GAGCTC	2 cut(s)	1170, 2002
StyD4I	CCNGG	4 cut(s)	159, 831, 2332, 2616
TaaI	ACNGT	4 cut(s)	24, 155, 1027, 1519
TaiI	ACGT	5 cut(s)	58, 85, 934, 1149, 1630
TaqI	TCGA	8 cut(s)	291, 457, 639, 912, 968, 1435, 2174, 2324
TatI	WGTACW	3 cut(s)	605, 1042, 1671
TauI	GCSGC	1 cut(s)	2460
TfiI	GAWTC	4 cut(s)	43, 346, 970, 1961
TscAI	CASTG	3 cut(s)	631, 1764, 2047
TseFI	GTSAC	4 cut(s)	319, 974, 1466, 2379
Tsp45I	GTSAC	4 cut(s)	319, 974, 1466, 2379
TspGWI	ACGGA	1 cut(s)	752
TspRI	CASTG	3 cut(s)	631, 1764, 2047
Van91I	CCANNNNNTGG	2 cut(s)	187, 2036
Vha464I	CTTAAG	1 cut(s)	1559
VneI	GTGCAC	1 cut(s)	658
VspI	ATTAAT	1 cut(s)	540
XapI	RAATTY	5 cut(s)	532, 1224, 1306, 1720, 1921
XceI	RCATGY	4 cut(s)	187, 1009, 1474, 1495
XcmI	CCANNNNNNNNNTGG	1 cut(s)	949
XmiI	GTMKAC	1 cut(s)	2066
XspI	CTAG	5 cut(s)	692, 804, 1944, 2385, 2454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.