AT1G61415

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
22659661 .. 22660967
1307 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61415.1

Sequence Viewer

Length: 504 bp
ATGGAGGATTCAGGTGCGATTCTATGTCAAATCTCCATTTTCAAGGACATGCTTGATCAGGTCAATCGGGAAATCGAAGCAAACATTCAGGTCACGCGAGAGATCGAATCACAGATCGGAAATTGTTCTGAGACGGAATCGGCTCTGTCTGTCAAAGAAGCTGAGCTTACTAAATCGTTCCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAGCTGATTCAAGAAACTCTCTGAAGCTATTGGAGGATGAGATTTGTCGTTTGAGAAATGAGCATAGTGAGCTAATTACAAGACTAACCGAGAAGCGGGAAGGTTTTGTGAAGATGTGTTTTGGGTTTCAAAGGGAGATTGAAGACAGTGAATTCAGGAATTTATTGTTGGAAAGAGAGTTTCTCGACAACGAAGTTCGGATGTTGGAGGAGAAGAACTTAGATGTGAAGAACTCTATTTTGGCTTACATGGAAGATGAAATGATGAATCTATTATCTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

167

Amino Acids

19.34

Weight (kDa)

4.47

Isoelectric Point (pI)

51.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015156)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 97
AciI CCGC 1 cut(s) 316
AcsI RAATTY 2 cut(s) 371, 379
AcuI CTGAAG 1 cut(s) 263
AfiI CCNNNNNNNGG 1 cut(s) 315
AgsI TTSAA 4 cut(s) 43, 231, 350, 362
AjuI GAANNNNNNNTTGG 4 cut(s) 371, 403, 443, 475
AluBI AGCT 5 cut(s) 161, 166, 224, 247, 292
AluI AGCT 5 cut(s) 161, 166, 224, 247, 292
Alw26I GTCTC 1 cut(s) 125
ApoI RAATTY 2 cut(s) 371, 379
Asp700I GAANNNNTTC 1 cut(s) 124
BbsI GAAGAC 1 cut(s) 369
BclI TGATCA 1 cut(s) 55
BcoDI GTCTC 1 cut(s) 125
BlpI GCTNAGC 1 cut(s) 162
BpiI GAAGAC 1 cut(s) 369
BplI GAGNNNNNCTC 2 cut(s) 387, 419
Bpu1102I GCTNAGC 1 cut(s) 162
Bsc4I CCNNNNNNNGG 1 cut(s) 315
BseGI GGATG 2 cut(s) 262, 426
BseLI CCNNNNNNNGG 1 cut(s) 315
BseMII CTCAG 3 cut(s) 120, 153, 203
BseRI GAGGAG 1 cut(s) 443
Bsh1236I CGCG 1 cut(s) 97
BslI CCNNNNNNNGG 1 cut(s) 315
BsmAI GTCTC 1 cut(s) 125
BsmBI CGTCTC 1 cut(s) 125
Bsp143I GATC 5 cut(s) 55, 102, 114, 198, 210
Bsp1720I GCTNAGC 1 cut(s) 162
BspACI CCGC 1 cut(s) 316
BspCNI CTCAG 3 cut(s) 121, 154, 202
BspFNI CGCG 1 cut(s) 97
BssMI GATC 5 cut(s) 55, 102, 114, 198, 210
Bst4CI ACNGT 1 cut(s) 368
BstDEI CTNAG 4 cut(s) 129, 162, 189, 439
BstF5I GGATG 2 cut(s) 262, 426
BstFNI CGCG 1 cut(s) 97
BstKTI GATC 5 cut(s) 58, 105, 117, 201, 213
BstMAI GTCTC 1 cut(s) 125
BstMBI GATC 5 cut(s) 55, 102, 114, 198, 210
BstMWI GCNNNNNNNGC 1 cut(s) 289
BstNSI RCATGY 1 cut(s) 52
BstUI CGCG 1 cut(s) 97
BstV2I GAAGAC 1 cut(s) 369
BtsCI GGATG 2 cut(s) 262, 426
BtsIMutI CAGTG 1 cut(s) 373
CviAII CATG 2 cut(s) 49, 469
CviJI RGCY 7 cut(s) 143, 161, 166, 224, 247, 292, 464
CviKI_1 RGCY 7 cut(s) 143, 161, 166, 224, 247, 292, 464
DdeI CTNAG 4 cut(s) 129, 162, 189, 439
DpnI GATC 5 cut(s) 57, 104, 116, 200, 212
DpnII GATC 5 cut(s) 55, 102, 114, 198, 210
Eco57I CTGAAG 1 cut(s) 263
EcoRI GAATTC 1 cut(s) 371
Esp3I CGTCTC 1 cut(s) 125
FaeI CATG 2 cut(s) 52, 472
FaiI YATR 4 cut(s) 25, 50, 285, 470
FalI AAGNNNNNCTT 2 cut(s) 150, 182
FatI CATG 2 cut(s) 48, 468
FauI CCCGC 1 cut(s) 309
FbaI TGATCA 1 cut(s) 55
FokI GGATG 2 cut(s) 269, 433
Hin1II CATG 2 cut(s) 52, 472
HinfI GANTC 6 cut(s) 8, 19, 107, 137, 227, 487
Hpy188I TCNGA 5 cut(s) 119, 130, 243, 420, 499
Hpy188III TCNNGA 5 cut(s) 68, 196, 231, 376, 404
HpyAV CCTTC 1 cut(s) 314
HpyCH4III ACNGT 1 cut(s) 368
HpyF10VI GCNNNNNNNGC 1 cut(s) 289
HpyF3I CTNAG 4 cut(s) 129, 162, 189, 439
Hsp92II CATG 2 cut(s) 52, 472
Ksp22I TGATCA 1 cut(s) 55
Kzo9I GATC 5 cut(s) 55, 102, 114, 198, 210
LpnPI CCDG 3 cut(s) 44, 74, 361
MaeIII GTNAC 2 cut(s) 91, 217
MalI GATC 5 cut(s) 57, 104, 116, 200, 212
MboI GATC 5 cut(s) 55, 102, 114, 198, 210
MboII GAAGA 5 cut(s) 343, 374, 445, 460, 485
MluCI AATT 4 cut(s) 121, 294, 371, 379
MmeI TCCRAC 2 cut(s) 369, 405
MnlI CCTC 2 cut(s) 247, 421
MroXI GAANNNNTTC 1 cut(s) 124
MspA1I CMGCKG 1 cut(s) 224
MvnI CGCG 1 cut(s) 97
MwoI GCNNNNNNNGC 1 cut(s) 289
NdeII GATC 5 cut(s) 55, 102, 114, 198, 210
NlaIII CATG 2 cut(s) 52, 472
NmuCI GTSAC 1 cut(s) 91
NspI RCATGY 1 cut(s) 52
PdmI GAANNNNTTC 1 cut(s) 124
PfeI GAWTC 6 cut(s) 8, 19, 107, 137, 227, 487
PvuII CAGCTG 1 cut(s) 224
Sau3AI GATC 5 cut(s) 55, 102, 114, 198, 210
SetI ASST 9 cut(s) 16, 63, 93, 163, 168, 226, 249, 294, 325
Sse9I AATT 4 cut(s) 121, 294, 371, 379
SsiI CCGC 1 cut(s) 316
TaaI ACNGT 1 cut(s) 368
TaqI TCGA 4 cut(s) 75, 105, 195, 405
TasI AATT 4 cut(s) 121, 294, 371, 379
TfiI GAWTC 6 cut(s) 8, 19, 107, 137, 227, 487
TscAI CASTG 1 cut(s) 373
TseFI GTSAC 1 cut(s) 91
Tsp45I GTSAC 1 cut(s) 91
TspDTI ATGAA 2 cut(s) 492, 500
TspGWI ACGGA 2 cut(s) 149, 205
TspRI CASTG 1 cut(s) 373
XapI RAATTY 2 cut(s) 371, 379
XceI RCATGY 1 cut(s) 52
XmnI GAANNNNTTC 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.