AT1G61450

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
22672992 .. 22674109
1118 bp
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UTR
Exon/CDS
Intron
AT1G61450.1

Sequence Viewer

Length: 363 bp
ATGGAGGATTCAGGAGCGATTCTATGTCAGATCTCCATTTTCAAGGACATGCTTGATCAGGTCAATCGGGAAATCGAAGCAAACATTCAGGTGACGCGAGAGATCGAATCACAGATCGGAGCGTGTTCTGAGATTGAATCTTCTCTGTCTCTCAAGGAACCTGAGCTTACTAGATCGTTCCTTGCTTCTCAATTCGAGATCAGCGGTTTGATCTCCGTTACAGCTGATTCAAGAAACTCTCTGAAGCTATTGGAGGATGAGATTTGTTGCTTAAGAAGTGAGCACAGTGAGCTAATTACAAAGACTAACCGAGAAGCGGGAAGGGTTTGTGAAGATGTGTTTTGGATTCCAAAGAGAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

120

Amino Acids

13.55

Weight (kDa)

4.57

Isoelectric Point (pI)

66.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015156)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 97
AciI CCGC 2 cut(s) 204, 317
AcuI CTGAAG 1 cut(s) 263
AfiI CCNNNNNNNGG 1 cut(s) 316
AflII CTTAAG 1 cut(s) 271
AgsI TTSAA 3 cut(s) 43, 137, 231
AluBI AGCT 4 cut(s) 166, 224, 247, 292
AluI AGCT 4 cut(s) 166, 224, 247, 292
Alw21I GWGCWC 1 cut(s) 285
Alw26I GTCTC 1 cut(s) 153
AsuHPI GGTGA 1 cut(s) 103
Bbv12I GWGCWC 1 cut(s) 285
BclI TGATCA 1 cut(s) 55
BcoDI GTCTC 1 cut(s) 153
BfaI CTAG 1 cut(s) 171
BfrI CTTAAG 1 cut(s) 271
BglII AGATCT 1 cut(s) 30
BmiI GGNNCC 1 cut(s) 159
Bpu10I CCTNAGC 1 cut(s) 162
BpuEI CTTGAG 1 cut(s) 137
Bsc4I CCNNNNNNNGG 1 cut(s) 316
BseGI GGATG 1 cut(s) 262
BseLI CCNNNNNNNGG 1 cut(s) 316
BseMII CTCAG 2 cut(s) 120, 153
Bsh1236I CGCG 1 cut(s) 97
BsiHKAI GWGCWC 1 cut(s) 285
BslI CCNNNNNNNGG 1 cut(s) 316
BsmAI GTCTC 1 cut(s) 153
Bsp1286I GDGCHC 1 cut(s) 285
Bsp143I GATC 7 cut(s) 30, 55, 102, 114, 173, 198, 210
BspACI CCGC 2 cut(s) 204, 317
BspCNI CTCAG 2 cut(s) 121, 154
BspFNI CGCG 1 cut(s) 97
BspLI GGNNCC 1 cut(s) 159
BspTI CTTAAG 1 cut(s) 271
BssMI GATC 7 cut(s) 30, 55, 102, 114, 173, 198, 210
Bst4CI ACNGT 1 cut(s) 287
BstAFI CTTAAG 1 cut(s) 271
BstDEI CTNAG 2 cut(s) 129, 162
BstF5I GGATG 1 cut(s) 262
BstFNI CGCG 1 cut(s) 97
BstKTI GATC 7 cut(s) 33, 58, 105, 117, 176, 201, 213
BstMAI GTCTC 1 cut(s) 153
BstMBI GATC 7 cut(s) 30, 55, 102, 114, 173, 198, 210
BstMWI GCNNNNNNNGC 1 cut(s) 289
BstNSI RCATGY 1 cut(s) 52
BstUI CGCG 1 cut(s) 97
BstX2I RGATCY 1 cut(s) 30
BstYI RGATCY 1 cut(s) 30
BtsCI GGATG 1 cut(s) 262
BtsIMutI CAGTG 1 cut(s) 292
CseI GACGC 1 cut(s) 103
CviAII CATG 1 cut(s) 49
CviJI RGCY 4 cut(s) 166, 224, 247, 292
CviKI_1 RGCY 4 cut(s) 166, 224, 247, 292
DdeI CTNAG 2 cut(s) 129, 162
DpnI GATC 7 cut(s) 32, 57, 104, 116, 175, 200, 212
DpnII GATC 7 cut(s) 30, 55, 102, 114, 173, 198, 210
Eco57I CTGAAG 1 cut(s) 263
FaeI CATG 1 cut(s) 52
FaiI YATR 2 cut(s) 25, 50
FatI CATG 1 cut(s) 48
FauI CCCGC 1 cut(s) 310
FbaI TGATCA 1 cut(s) 55
FokI GGATG 1 cut(s) 269
FspBI CTAG 1 cut(s) 171
HgaI GACGC 1 cut(s) 103
Hin1II CATG 1 cut(s) 52
HinfI GANTC 6 cut(s) 8, 19, 107, 137, 227, 346
HphI GGTGA 1 cut(s) 103
Hpy188I TCNGA 4 cut(s) 30, 119, 130, 243
Hpy188III TCNNGA 4 cut(s) 12, 68, 196, 231
HpyAV CCTTC 1 cut(s) 315
HpyCH4III ACNGT 1 cut(s) 287
HpyF10VI GCNNNNNNNGC 1 cut(s) 289
HpyF3I CTNAG 2 cut(s) 129, 162
Hsp92II CATG 1 cut(s) 52
Ksp22I TGATCA 1 cut(s) 55
Kzo9I GATC 7 cut(s) 30, 55, 102, 114, 173, 198, 210
LmnI GCTCC 2 cut(s) 14, 119
LpnPI CCDG 3 cut(s) 44, 74, 174
MaeI CTAG 1 cut(s) 171
MaeIII GTNAC 2 cut(s) 91, 217
MalI GATC 7 cut(s) 32, 57, 104, 116, 175, 200, 212
MboI GATC 7 cut(s) 30, 55, 102, 114, 173, 198, 210
MboII GAAGA 2 cut(s) 132, 344
MflI RGATCY 1 cut(s) 30
MhlI GDGCHC 1 cut(s) 285
MluCI AATT 2 cut(s) 191, 294
MnlI CCTC 1 cut(s) 247
MseI TTAA 1 cut(s) 272
MslI CAYNNNNRTG 1 cut(s) 89
MspA1I CMGCKG 2 cut(s) 204, 224
MspCI CTTAAG 1 cut(s) 271
MvnI CGCG 1 cut(s) 97
MwoI GCNNNNNNNGC 1 cut(s) 289
NdeII GATC 7 cut(s) 30, 55, 102, 114, 173, 198, 210
NlaIII CATG 1 cut(s) 52
NlaIV GGNNCC 1 cut(s) 159
NmuCI GTSAC 1 cut(s) 91
NspI RCATGY 1 cut(s) 52
PfeI GAWTC 6 cut(s) 8, 19, 107, 137, 227, 346
PspN4I GGNNCC 1 cut(s) 159
PsuI RGATCY 1 cut(s) 30
PvuII CAGCTG 1 cut(s) 224
RseI CAYNNNNRTG 1 cut(s) 89
SaqAI TTAA 1 cut(s) 272
Sau3AI GATC 7 cut(s) 30, 55, 102, 114, 173, 198, 210
SduI GDGCHC 1 cut(s) 285
SetI ASST 7 cut(s) 63, 93, 163, 168, 226, 249, 294
SmiMI CAYNNNNRTG 1 cut(s) 89
SmlI CTYRAG 2 cut(s) 152, 271
SmoI CTYRAG 2 cut(s) 152, 271
Sse9I AATT 2 cut(s) 191, 294
SsiI CCGC 2 cut(s) 204, 317
SspMI CTAG 1 cut(s) 171
TaaI ACNGT 1 cut(s) 287
TaqI TCGA 3 cut(s) 75, 105, 195
TasI AATT 2 cut(s) 191, 294
TfiI GAWTC 6 cut(s) 8, 19, 107, 137, 227, 346
Tru1I TTAA 1 cut(s) 272
Tru9I TTAA 1 cut(s) 272
TscAI CASTG 1 cut(s) 292
TseFI GTSAC 1 cut(s) 91
Tsp45I GTSAC 1 cut(s) 91
TspGWI ACGGA 1 cut(s) 205
TspRI CASTG 1 cut(s) 292
Vha464I CTTAAG 1 cut(s) 271
XceI RCATGY 1 cut(s) 52
XspI CTAG 1 cut(s) 171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.