Rh7BG068800

Histone deacetylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0015156
Physical Location & Seq
Reverse (-)
4572326 .. 4583766
11441 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG068800.1

Sequence Viewer

Length: 2388 bp
ATGGAGGATTCGGGAGCGATCCTGTGCCAAATCTCATCCTTGAAGGACATGCTTGACCAGGTGAACGAAGAAATTGAAGCGAATATTCAGATAACGCGGGAGATCGAGTCGGAGATCGTGAAATGCTCGGAATTCGAGAGCGCTCTGGCTGCGAAAGAATCAGATCTCACCAAGACGCTCTACGTTTCTCAGTTTGAGCTCATCGGACTGGTCACCGTCACCAATGATTTAAGAAGCTCTGTAGAAAATTTGGGGAAGGAATTAGATGGAATGAGATTGAAGCGGGACCAGACTCTTGAGAGAATCCACGGAAATCGGGAAAGGTTTATGGCATTGTGCATGGAATTCCAGAAGGACATTGATAAGGGTAGTGAGAATGTACTAAGGGCTCTGCTGTCAGAGAAAGAGTACCTTCAAAATGAAATGCTTATGTTGGATGAGAAGAACAATGCTTTGAAGAACTCAATGATGGCGTTTGTTGAGGGGATTCTTGAAGATCTCAACAGTGGAAACTCTGCTTTACAGGTTGAAATACAGAAGGCTAATCAGGAGAACGAGAAATTGCTGGAGGATATTGATAACATGAAAACTTCATTGCTGTCAAATTTTGCATTTGATGATATCAGTGGAGCAGGATCGTGGACTTTACAGCCAATAAAGAATGCGACAGTACAGATGAGAATCAGGGAAGATGTTCACATATTGATCTCTTTTTCTGTGGGTCTGATCACATCTGGCAGGCCCCTCAAACCAGACCTGGTCGCACAGCTCTTCTGCTTTCCCCAGAAATTTTTGGCTCTGCTTTCGCATCTACAGCAGATCATACCCACCCTTTGTCCTCTACCAGGAATGATTGTGGCTGAAAATCTCCATTCAAGCACTGAACAGAACTTGATATTGGAAACACTTCAAATGACTCGTTTAGCTAATGGGGAGGCGGAGATAAGTCATCACAAATCGAACAATGAAGTCTTCGGCAAAGATGCATCGACAGATGATGTGAATGGAAACACGCTGCCTGATGTTTCAAGTAAAAAGGCAGGACAGCAAAAAGAAATGACTTTCCAAGATGTGTACAACCAAGACCTCGATGACGAGGATGATGACAGTGATTGGGAGCCCCTGCAAAAGAATGTTGAACTTGTAAAGTGGTTCTGCACCAACTGCACAATGGTCAACCTTGGGGATGTCAATTGCGATATATGTGGGGAACATAGAGAATCTGGAATTCTTAGGCATGGGTTTTTGGCATCTCCCCTGTTACCGGATTCAGGCCTAACTGAGATTGATTCTGACATTAGAGAAAGACACAAAGACACAGGGTCACAAGATTCAGCGTCTAACAGTTCGACTGCTGTGGGTTTTGATGAGAGAATGTTGCTACATTCAGAAATTCAATTGACGTCGCATCCACACCCAGAAAGACCTGACCGTATTCGAGCTATTGCTGCTAGCCTTGCTACAGCTGGTATCTTTCCAGGACGATGTTATCCAATTCCCGCTAGAGAAATCACGCGTGAAGAACTTCAGATGGTCCATTCTTTGGAGCATGTTGAAGCTGTTGATCTTACAGGTCATATGTTTTCTAGTTATTTCACCCCTGACACATATGCCAATGAACATTCAGCACGCGCTGCTAGGCTTGCAGCAGGTTTATGTGCTGATCTTGCTTCAGCAATTGTTTCTGGACGTACAAAAAATGGTTTTGCTCTGGTTCGTCCTCCTGGTCATCATGCTGGTATAAAGCAGGCTATGGGGTTTTGCCTCCACAATAATGCAGCAGTTGCTGCATTAGCAGCTCAAGTTTCTGGGGCTAAGAAAGTGCTAATTGTTGATTGGGATGTTCATCATGGGAATGGCACCCAGGAAATATTTGAACAGAACAAATCGGTCCTGTATATATCCTTACATAGACATGAGGGGGGAAAGTTCTATCCTGGTACTGGAGCCGCTGATGAGGTTGGTACTATGGGAGCTGAAGGATACTGTGTGAATGTTCCATGGAGTCGTGGTGGAGTGGGTGATAATGACTATGTTTTTGCATTTCAGCATGTTGTGCTTCCTATAGCTTCTGCATTTGCTCCCGATTTCACCATCATATCAGCAGGATTTGATGCAGCGAGGGGTGATCCTCTAGGATGCTGTGATGTTACTCCTGCCGGCTATGCAAAGATGACTGACATGTTGACTGACTTGTGTGGAGGGAAGTTGTTAGTCATTCTTGAGGGCGGGTACAATCTACGTTCAATATCATCTTCTGCTACTTCAGTAATTAAGGTAATCATTTCTTTCATTTATGAAACGATTTTGTTATGTGTGTCTCCATTGGCCACAGCACATGGTCTTAAATCTGAAGAGATGCCGGTGCTTCCCATTTTACTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05034 ko05165 ko05203 map05034 map05165 map05203
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

795

Amino Acids

87.17

Weight (kDa)

4.88

Isoelectric Point (pI)

35.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 472 - 760 1.9e-92 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61415 AT1G61415 AT1G61450
fragaria_vesca FvH4_5g12640 FvH4_5g12640 FvH4_5g12640
malus_domestica MD14G1222400.v1.1
prunus_persica Prupe.5G218000_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0184691
rosa_laevigata RLG00000004959
rosa_multiflora Rmu_ssc0000289.1_g000023
rosa_samantha Rh7AG078500 Rh7BG068800 Rh7CG069600 Rh7DG069000
rosa_wichuraiana Rw7G005690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1406
Acc36I ACCTGC 1 cut(s) 1640
AccB1I GGYRCC 1 cut(s) 1859
AccB7I CCANNNNNTGG 1 cut(s) 1543
AccII CGCG 3 cut(s) 97, 1516, 1632
AciI CCGC 6 cut(s) 97, 283, 938, 1500, 1950, 2229
AclWI GGATC 3 cut(s) 13, 643, 2123
AcoI YGGCCR 1 cut(s) 2328
AcsI RAATTY 7 cut(s) 131, 247, 344, 604, 788, 1227, 1392
AcuI CTGAAG 5 cut(s) 1511, 1656, 1998, 2250, 2373
AcyI GRCGYC 1 cut(s) 1403
AfaI GTAC 8 cut(s) 381, 410, 672, 1076, 1693, 1942, 1966, 2234
AfeI AGCGCT 1 cut(s) 142
AfiI CCNNNNNNNGG 5 cut(s) 845, 1264, 1271, 1543, 1943
AflIII ACRYGT 2 cut(s) 1514, 2181
AhdI GACNNNNNGTC 1 cut(s) 1321
AjnI CCWGG 7 cut(s) 57, 756, 844, 1477, 1723, 1863, 1936
AjuI GAANNNNNNNTTGG 2 cut(s) 881, 913
Alw21I GWGCWC 1 cut(s) 201
Alw26I GTCTC 1 cut(s) 2325
AlwI GGATC 3 cut(s) 13, 643, 2123
AlwNI CAGNNNCTG 1 cut(s) 1787
Aor51HI AGCGCT 1 cut(s) 142
AoxI GGCC 3 cut(s) 740, 1273, 2328
ApeKI GCWGC 9 cut(s) 149, 1015, 1448, 1634, 1646, 1778, 1787, 1796, 2117
ApoI RAATTY 7 cut(s) 131, 247, 344, 604, 788, 1227, 1392
ArsI GACNNNNNNTTYG 2 cut(s) 2021, 2053
Asp700I GAANNNNTTC 3 cut(s) 693, 906, 1524
AspLEI GCGC 2 cut(s) 143, 1634
AspS9I GGNCC 4 cut(s) 286, 741, 1534, 1891
AsuHPI GGTGA 8 cut(s) 73, 160, 205, 211, 1588, 2033, 2083, 2138
AsuNHI GCTAGC 1 cut(s) 1451
AvaII GGWCC 3 cut(s) 286, 1534, 1891
BalI TGGCCA 1 cut(s) 2330
BanI GGYRCC 1 cut(s) 1859
BanII GRGCYC 3 cut(s) 201, 391, 1122
BbsI GAAGAC 1 cut(s) 964
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 9 cut(s) 136, 1002, 1435, 1621, 1658, 1774, 1790, 1808, 2129
BccI CCATC 4 cut(s) 260, 463, 1525, 2102
BciT130I CCWGG 7 cut(s) 59, 758, 846, 1479, 1725, 1865, 1938
BciVI GTATCC 1 cut(s) 1976
BclI TGATCA 1 cut(s) 726
BcoDI GTCTC 1 cut(s) 2325
BfaI CTAG 5 cut(s) 1452, 1503, 1587, 1638, 2135
BfmI CTRYAG 4 cut(s) 240, 812, 1461, 2064
BfoI RGCGCY 1 cut(s) 144
BfuAI ACCTGC 1 cut(s) 1640
BfuI GTATCC 1 cut(s) 1976
BglII AGATCT 2 cut(s) 163, 496
Bme1390I CCNGG 7 cut(s) 59, 758, 846, 1479, 1725, 1865, 1938
Bme18I GGWCC 3 cut(s) 286, 1534, 1891
BmeRI GACNNNNNGTC 1 cut(s) 1321
BmgT120I GGNCC 4 cut(s) 286, 741, 1534, 1891
BmiI GGNNCC 5 cut(s) 287, 743, 1119, 1861, 1948
BmrFI CCNGG 7 cut(s) 59, 758, 846, 1479, 1725, 1865, 1938
BmsI GCATC 8 cut(s) 817, 973, 995, 1259, 1417, 2104, 2129, 2349
BmtI GCTAGC 1 cut(s) 1455
BpiI GAAGAC 1 cut(s) 964
BpmI CTGGAG 2 cut(s) 587, 1965
BpuEI CTTGAG 3 cut(s) 317, 1785, 2243
BsaBI GATNNNNATC 2 cut(s) 680, 1845
BsaHI GRCGYC 1 cut(s) 1403
BsaJI CCNNGG 4 cut(s) 307, 1180, 1863, 2000
BsaWI WCCGGW 1 cut(s) 1264
BsaXI ACNNNNNCTCC 4 cut(s) 92, 122, 1996, 2026
Bsc4I CCNNNNNNNGG 5 cut(s) 845, 1264, 1271, 1543, 1943
Bse118I RCCGGY 2 cut(s) 2159, 2362
Bse1I ACTGG 2 cut(s) 213, 1948
Bse3DI GCAATG 1 cut(s) 593
Bse8I GATNNNNATC 2 cut(s) 680, 1845
BseBI CCWGG 7 cut(s) 59, 758, 846, 1479, 1725, 1865, 1938
BseDI CCNNGG 4 cut(s) 307, 1180, 1863, 2000
BseGI GGATG 7 cut(s) 35, 442, 1105, 1192, 1408, 1846, 2144
BseJI GATNNNNATC 2 cut(s) 680, 1845
BseLI CCNNNNNNNGG 5 cut(s) 845, 1264, 1271, 1543, 1943
BseMI GCAATG 1 cut(s) 593
BseMII CTCAG 2 cut(s) 203, 1272
BseNI ACTGG 2 cut(s) 213, 1948
BseXI GCAGC 9 cut(s) 136, 1002, 1435, 1621, 1658, 1774, 1790, 1808, 2129
BsgI GTGCAG 2 cut(s) 1141, 1150
Bsh1236I CGCG 3 cut(s) 97, 1516, 1632
BshFI GGCC 3 cut(s) 742, 1275, 2330
BshNI GGYRCC 1 cut(s) 1859
BsiHKAI GWGCWC 1 cut(s) 201
BsiSI CCGG 3 cut(s) 1265, 2160, 2363
BslFI GGGAC 1 cut(s) 299
BslI CCNNNNNNNGG 5 cut(s) 845, 1264, 1271, 1543, 1943
BsmAI GTCTC 1 cut(s) 2325
BsmFI GGGAC 1 cut(s) 299
BsmI GAATGC 1 cut(s) 667
BsnI GGCC 3 cut(s) 742, 1275, 2330
Bsp1286I GDGCHC 3 cut(s) 201, 391, 1122
Bsp1407I TGTACA 1 cut(s) 1074
Bsp19I CCATGG 1 cut(s) 2000
BspACI CCGC 6 cut(s) 97, 283, 938, 1500, 1950, 2229
BspANI GGCC 3 cut(s) 742, 1275, 2330
BspCNI CTCAG 2 cut(s) 202, 1273
BspFNI CGCG 3 cut(s) 97, 1516, 1632
BspLI GGNNCC 5 cut(s) 287, 743, 1119, 1861, 1948
BspMI ACCTGC 1 cut(s) 1640
BspOI GCTAGC 1 cut(s) 1455
BspPI GGATC 3 cut(s) 13, 643, 2123
BspQI GCTCTTC 1 cut(s) 776
BspT107I GGYRCC 1 cut(s) 1859
BsrDI GCAATG 1 cut(s) 593
BsrFI RCCGGY 2 cut(s) 2159, 2362
BsrGI TGTACA 1 cut(s) 1074
BsrI ACTGG 2 cut(s) 213, 1948
BssAI RCCGGY 2 cut(s) 2159, 2362
BssECI CCNNGG 4 cut(s) 307, 1180, 1863, 2000
BssNI GRCGYC 1 cut(s) 1403
BssT1I CCWWGG 2 cut(s) 1180, 2000
Bst2UI CCWGG 7 cut(s) 59, 758, 846, 1479, 1725, 1865, 1938
Bst4CI ACNGT 7 cut(s) 217, 506, 670, 1109, 1346, 1433, 1988
Bst6I CTCTTC 2 cut(s) 776, 2349
BstACI GRCGYC 1 cut(s) 1403
BstAPI GCANNNNNTGC 5 cut(s) 1164, 1634, 1784, 1787, 2056
BstAUI TGTACA 1 cut(s) 1074
BstC8I GCNNGC 6 cut(s) 740, 1453, 1630, 1644, 1749, 2161
BstDEI CTNAG 5 cut(s) 189, 383, 1232, 1281, 1815
BstDSI CCRYGG 2 cut(s) 307, 2000
BstEII GGTNACC 1 cut(s) 211
BstENI CCTNNNNNAGG 1 cut(s) 843
BstF5I GGATG 7 cut(s) 35, 442, 1105, 1192, 1408, 1846, 2144
BstFNI CGCG 3 cut(s) 97, 1516, 1632
BstH2I RGCGCY 1 cut(s) 144
BstHHI GCGC 2 cut(s) 143, 1634
BstMAI GTCTC 1 cut(s) 2325
BstNI CCWGG 7 cut(s) 59, 758, 846, 1479, 1725, 1865, 1938
BstNSI RCATGY 4 cut(s) 52, 1553, 2054, 2185
BstPI GGTNACC 1 cut(s) 211
BstSCI CCNGG 7 cut(s) 57, 756, 844, 1477, 1723, 1863, 1936
BstSFI CTRYAG 4 cut(s) 240, 812, 1461, 2064
BstUI CGCG 3 cut(s) 97, 1516, 1632
BstV1I GCAGC 9 cut(s) 136, 1002, 1435, 1621, 1658, 1774, 1790, 1808, 2129
BstV2I GAAGAC 1 cut(s) 964
BstX2I RGATCY 2 cut(s) 163, 496
BstYI RGATCY 2 cut(s) 163, 496
BsuI GTATCC 1 cut(s) 1976
BsuRI GGCC 3 cut(s) 742, 1275, 2330
BtgI CCRYGG 2 cut(s) 307, 2000
BtsCI GGATG 7 cut(s) 35, 442, 1105, 1192, 1408, 1846, 2144
BtsIMutI CAGTG 4 cut(s) 511, 631, 879, 1114
BveI ACCTGC 1 cut(s) 1640
Cac8I GCNNGC 6 cut(s) 740, 1453, 1630, 1644, 1749, 2161
CaiI CAGNNNCTG 1 cut(s) 1787
CfoI GCGC 2 cut(s) 143, 1634
Cfr10I RCCGGY 2 cut(s) 2159, 2362
Cfr13I GGNCC 4 cut(s) 286, 741, 1534, 1891
CseI GACGC 2 cut(s) 184, 1326
CsiI ACCWGGT 2 cut(s) 57, 756
Csp6I GTAC 8 cut(s) 380, 409, 671, 1075, 1692, 1941, 1965, 2233
CviQI GTAC 8 cut(s) 380, 409, 671, 1075, 1692, 1941, 1965, 2233
DdeI CTNAG 5 cut(s) 189, 383, 1232, 1281, 1815
DriI GACNNNNNGTC 1 cut(s) 1321
EaeI YGGCCR 1 cut(s) 2328
Eam1104I CTCTTC 2 cut(s) 776, 2349
Eam1105I GACNNNNNGTC 1 cut(s) 1321
EarI CTCTTC 2 cut(s) 776, 2349
EciI GGCGGA 1 cut(s) 953
Ecl136II GAGCTC 1 cut(s) 199
Eco130I CCWWGG 2 cut(s) 1180, 2000
Eco147I AGGCCT 1 cut(s) 1275
Eco24I GRGCYC 3 cut(s) 201, 391, 1122
Eco32I GATATC 1 cut(s) 622
Eco47I GGWCC 3 cut(s) 286, 1534, 1891
Eco47III AGCGCT 1 cut(s) 142
Eco53kI GAGCTC 1 cut(s) 199
Eco57I CTGAAG 5 cut(s) 1511, 1656, 1998, 2250, 2373
Eco91I GGTNACC 1 cut(s) 211
EcoICRI GAGCTC 1 cut(s) 199
EcoNI CCTNNNNNAGG 1 cut(s) 843
EcoO109I RGGNCCY 1 cut(s) 741
EcoO65I GGTNACC 1 cut(s) 211
EcoRI GAATTC 3 cut(s) 131, 344, 1227
EcoRII CCWGG 7 cut(s) 57, 756, 844, 1477, 1723, 1863, 1936
EcoRV GATATC 1 cut(s) 622
EcoT14I CCWWGG 2 cut(s) 1180, 2000
EcoT22I ATGCAT 1 cut(s) 988
EcoT38I GRGCYC 3 cut(s) 201, 391, 1122
ErhI CCWWGG 2 cut(s) 1180, 2000
FalI AAGNNNNNCTT 2 cut(s) 396, 428
FaqI GGGAC 1 cut(s) 299
FauI CCCGC 4 cut(s) 90, 276, 1507, 2222
FauNDI CATATG 2 cut(s) 1578, 1609
FbaI TGATCA 1 cut(s) 726
FokI GGATG 7 cut(s) 22, 449, 1112, 1199, 1395, 1853, 2151
FriOI GRGCYC 3 cut(s) 201, 391, 1122
FspBI CTAG 5 cut(s) 1452, 1503, 1587, 1638, 2135
GlaI GCGC 2 cut(s) 142, 1633
GsuI CTGGAG 2 cut(s) 587, 1965
HaeII RGCGCY 1 cut(s) 144
HaeIII GGCC 3 cut(s) 742, 1275, 2330
HapII CCGG 3 cut(s) 1265, 2160, 2363
HgaI GACGC 2 cut(s) 184, 1326
HhaI GCGC 2 cut(s) 143, 1634
Hin1I GRCGYC 1 cut(s) 1403
Hin6I GCGC 2 cut(s) 141, 1632
HinP1I GCGC 2 cut(s) 141, 1632
HincII GTYRAC 2 cut(s) 1177, 2187
HindII GTYRAC 2 cut(s) 1177, 2187
HpaII CCGG 3 cut(s) 1265, 2160, 2363
HphI GGTGA 8 cut(s) 73, 160, 205, 211, 1588, 2033, 2083, 2138
Hpy166II GTNNAC 6 cut(s) 64, 642, 697, 1075, 1177, 2187
Hpy8I GTNNAC 6 cut(s) 64, 642, 697, 1075, 1177, 2187
Hpy99I CGWCG 1 cut(s) 1408
HpyAV CCTTC 6 cut(s) 37, 250, 346, 422, 532, 1973
HpyCH4III ACNGT 7 cut(s) 217, 506, 670, 1109, 1346, 1433, 1988
HpyCH4IV ACGT 4 cut(s) 183, 1403, 1690, 2242
HpyF3I CTNAG 5 cut(s) 189, 383, 1232, 1281, 1815
HpySE526I ACGT 4 cut(s) 183, 1403, 1690, 2242
Hsp92I GRCGYC 1 cut(s) 1403
HspAI GCGC 2 cut(s) 141, 1632
KroI GCCGGC 1 cut(s) 2159
KroNI GCCGGC 1 cut(s) 2161
Ksp22I TGATCA 1 cut(s) 726
LguI GCTCTTC 1 cut(s) 776
LmnI GCTCC 7 cut(s) 14, 629, 1117, 1546, 1946, 1973, 2086
Lsp1109I GCAGC 9 cut(s) 136, 1002, 1435, 1621, 1658, 1774, 1790, 1808, 2129
LweI GCATC 8 cut(s) 817, 973, 995, 1259, 1417, 2104, 2129, 2349
MabI ACCWGGT 2 cut(s) 57, 756
MaeI CTAG 5 cut(s) 1452, 1503, 1587, 1638, 2135
MaeII ACGT 4 cut(s) 183, 1403, 1690, 2242
MaeIII GTNAC 5 cut(s) 211, 217, 1260, 1323, 2149
MfeI CAATTG 3 cut(s) 1192, 1397, 1677
MflI RGATCY 2 cut(s) 163, 496
MhlI GDGCHC 3 cut(s) 201, 391, 1122
MlsI TGGCCA 1 cut(s) 2330
MluI ACGCGT 1 cut(s) 1514
MluNI TGGCCA 1 cut(s) 2330
MlyI GAGTC 4 cut(s) 116, 286, 910, 2014
MmeI TCCRAC 2 cut(s) 90, 414
Mox20I TGGCCA 1 cut(s) 2330
Mph1103I ATGCAT 1 cut(s) 988
MroNI GCCGGC 1 cut(s) 2159
MroXI GAANNNNTTC 3 cut(s) 693, 906, 1524
MscI TGGCCA 1 cut(s) 2330
MseI TTAA 3 cut(s) 230, 2274, 2346
MslI CAYNNNNRTG 3 cut(s) 1773, 1854, 1914
Msp20I TGGCCA 1 cut(s) 2330
MspA1I CMGCKG 2 cut(s) 1466, 1952
MspI CCGG 3 cut(s) 1265, 2160, 2363
MspR9I CCNGG 7 cut(s) 59, 758, 846, 1479, 1725, 1865, 1938
MunI CAATTG 3 cut(s) 1192, 1397, 1677
Mva1269I GAATGC 1 cut(s) 667
MvaI CCWGG 7 cut(s) 59, 758, 846, 1479, 1725, 1865, 1938
MvnI CGCG 3 cut(s) 97, 1516, 1632
NaeI GCCGGC 1 cut(s) 2161
NcoI CCATGG 1 cut(s) 2000
NdeI CATATG 2 cut(s) 1578, 1609
NgoMIV GCCGGC 1 cut(s) 2159
NheI GCTAGC 1 cut(s) 1451
NlaIV GGNNCC 5 cut(s) 287, 743, 1119, 1861, 1948
NmuCI GTSAC 3 cut(s) 211, 217, 1323
NsiI ATGCAT 1 cut(s) 988
NspI RCATGY 4 cut(s) 52, 1553, 2054, 2185
PceI AGGCCT 1 cut(s) 1275
PciI ACATGT 1 cut(s) 2181
PciSI GCTCTTC 1 cut(s) 776
PctI GAATGC 1 cut(s) 667
PdiI GCCGGC 1 cut(s) 2161
PdmI GAANNNNTTC 3 cut(s) 693, 906, 1524
PfeI GAWTC 9 cut(s) 8, 158, 303, 487, 681, 1220, 1268, 1289, 1331
PflFI GACNNNGTC 1 cut(s) 758
PflMI CCANNNNNTGG 1 cut(s) 1543
PfoI TCCNGGA 1 cut(s) 1477
PleI GAGTC 4 cut(s) 115, 286, 910, 2013
PpsI GAGTC 4 cut(s) 115, 286, 910, 2013
PscI ACATGT 1 cut(s) 2181
Psp124BI GAGCTC 1 cut(s) 201
Psp6I CCWGG 7 cut(s) 57, 756, 844, 1477, 1723, 1863, 1936
PspEI GGTNACC 1 cut(s) 211
PspGI CCWGG 7 cut(s) 57, 756, 844, 1477, 1723, 1863, 1936
PspN4I GGNNCC 5 cut(s) 287, 743, 1119, 1861, 1948
PspPI GGNCC 4 cut(s) 286, 741, 1534, 1891
PstNI CAGNNNCTG 1 cut(s) 1787
PsuI RGATCY 2 cut(s) 163, 496
PsyI GACNNNGTC 1 cut(s) 758
PvuII CAGCTG 1 cut(s) 1466
RsaI GTAC 8 cut(s) 381, 410, 672, 1076, 1693, 1942, 1966, 2234
RsaNI GTAC 8 cut(s) 380, 409, 671, 1075, 1692, 1941, 1965, 2233
RseI CAYNNNNRTG 3 cut(s) 1773, 1854, 1914
SacI GAGCTC 1 cut(s) 201
SapI GCTCTTC 1 cut(s) 776
SaqAI TTAA 3 cut(s) 230, 2274, 2346
Sau96I GGNCC 4 cut(s) 286, 741, 1534, 1891
SchI GAGTC 4 cut(s) 116, 286, 910, 2014
ScrFI CCNGG 7 cut(s) 59, 758, 846, 1479, 1725, 1865, 1938
SduI GDGCHC 3 cut(s) 201, 391, 1122
SexAI ACCWGGT 2 cut(s) 57, 756
SfaNI GCATC 8 cut(s) 817, 973, 995, 1259, 1417, 2104, 2129, 2349
SfcI CTRYAG 4 cut(s) 240, 812, 1461, 2064
SinI GGWCC 3 cut(s) 286, 1534, 1891
SmiMI CAYNNNNRTG 3 cut(s) 1773, 1854, 1914
SmlI CTYRAG 3 cut(s) 296, 1800, 2222
SmoI CTYRAG 3 cut(s) 296, 1800, 2222
SseBI AGGCCT 1 cut(s) 1275
SsiI CCGC 6 cut(s) 97, 283, 938, 1500, 1950, 2229
SspI AATATT 2 cut(s) 85, 1872
SspMI CTAG 5 cut(s) 1452, 1503, 1587, 1638, 2135
SstI GAGCTC 1 cut(s) 201
StuI AGGCCT 1 cut(s) 1275
StyD4I CCNGG 7 cut(s) 57, 756, 844, 1477, 1723, 1863, 1936
StyI CCWWGG 2 cut(s) 1180, 2000
TaaI ACNGT 7 cut(s) 217, 506, 670, 1109, 1346, 1433, 1988
TaiI ACGT 4 cut(s) 186, 1406, 1693, 2245
TaqI TCGA 7 cut(s) 105, 135, 959, 989, 1089, 1349, 1438
TaqII GACCGA 1 cut(s) 1879
TatI WGTACW 3 cut(s) 379, 670, 1074
TauI GCSGC 1 cut(s) 1952
TfiI GAWTC 9 cut(s) 8, 158, 303, 487, 681, 1220, 1268, 1289, 1331
Tru1I TTAA 3 cut(s) 230, 2274, 2346
Tru9I TTAA 3 cut(s) 230, 2274, 2346
TscAI CASTG 4 cut(s) 511, 631, 886, 1114
TseFI GTSAC 3 cut(s) 211, 217, 1323
TseI GCWGC 9 cut(s) 149, 1015, 1448, 1634, 1646, 1778, 1787, 1796, 2117
Tsp45I GTSAC 3 cut(s) 211, 217, 1323
TspDTI ATGAA 8 cut(s) 435, 582, 599, 981, 1632, 1835, 2281, 2313
TspGWI ACGGA 1 cut(s) 324
TspRI CASTG 4 cut(s) 511, 631, 886, 1114
Tth111I GACNNNGTC 1 cut(s) 758
Van91I CCANNNNNTGG 1 cut(s) 1543
VpaK11BI GGWCC 3 cut(s) 286, 1534, 1891
XagI CCTNNNNNAGG 1 cut(s) 843
XapI RAATTY 7 cut(s) 131, 247, 344, 604, 788, 1227, 1392
XceI RCATGY 4 cut(s) 52, 1553, 2054, 2185
XcmI CCANNNNNNNNNTGG 1 cut(s) 1168
XmnI GAANNNNTTC 3 cut(s) 693, 906, 1524
XspI CTAG 5 cut(s) 1452, 1503, 1587, 1638, 2135
ZraI GACGTC 1 cut(s) 1404
Zsp2I ATGCAT 1 cut(s) 988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.