Rh7AG078500

Histone deacetylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0015156
Physical Location & Seq
Forward (+)
5596024 .. 5608130
12107 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG078500.1

Sequence Viewer

Length: 2511 bp
ATGGAGGATTCGGGAGCGATCCTGTGCCAAATCTCATCCTTGAAGGACATGCTTGACCAGGTGAACGAAGAAATTGAAGCGAATATTCAGATAACGCGGGAGATCGAGTCGGAGATCGTGAAATGCTCGGAATTCGAGAGCGCTCTGGCTGCGAAAGAATCCGACCTCACCAAGACGCTCTACGTTTCTCAGTTTGAGCTCATCGGACTGGTCACCGTCACCAATGATTTAAGAAGCTCTGTAGAAAATTTGGGGAAGGAATTAGATGGAATGAGATTGAAGCGGGACGAGACTCTTGGGAGAATCCACGGAAATCGGGAAAGGTTTATGGCATTGTGCATGGAATTCCAGAAGGACATTGATAAGGGTAGTGAGAATGTACTAAGGGCTCTGCTGTCAGAGAAAGAGTACCTTCAAAATGAAATGCTTATGTTGGATGAGAAGAACAATGCTTTGAAGAACTCAATGATGGCGTTTGTTGAGGGGATTCTTGAAGATCTCAACAGTGGAAACTCTGCTTTACAGGTTGAAATACAGAAGGCTAATCAAGAGAACAAGAAATTGCTGGAGGATATTGATAACATGAAAACTTCATTGCTGTCAAATTTTGCATTTGATGATATCAGTGGAGCAGGATCGTGGACTTTACAGCCAATAAAGAATGCGACAGTACAGATGAGAATCAGGGAAGATGTTCGCATATTGATCTCTTTTTCTGTGGGTCTGATCACATCTGGCAGGCCCCTCAAACCAGACCCGATCATACCCACCCTTTGTCCTCTACCAGGAATGATTGTGGCTGAAAATCTCCATGCAAGCACTGAACAGAACTTGATACTGGAAACACTTCAAATGACTCGTTTAGCTAATGGGGAGGCGGAGATAAGTCATCACAAATCAAACAATGAAGTCTTCGGCAAAGATGCATCGACAGATGATGTGAATGGAAACACGCTGCCTGATGTTTCAAGTAAAAAGGCAGGACAGCAAAAAGAAATGACTTTCCAAGATGTGTACAACCAAGACCTCGATGACGAGGATGATGACAGTGATTGGGAGCCCCTGCGAAAGAATGTTGAACTTGTGAAGTGGTTCTGCACCAACTGCACAATGGTCAACCTTGGGGATGTCAATTGTGATATATGTGGGGAACATAGAGAATCTGGAATTCTTAGGCATGGGTTTTTGGCATCTCCCCTGTTACGGGATTCAGGCCTAACTGAAATTGATTCTGACATTAGAGAAAGACACAAAGGGTCACAAGATTCAGCGTCTAACAGTTCTACTGCTGTGGGTTTTGATGAGAGAATGTTGCTACATTCAGAAATTCAATTGACGTCGCATCCACACCCAGAAAGACCTGACCGTATTCGAGCTATTGCTGCTAGCCTTGCTACAGCTGGTATCTTTCCAGGACGATGTTATCCAATTCCCGCTAGAGAAATCACGCGTGAAGAACTTCAGATGGTCCATTCTTTGGAGCATGTTGAAGCTGTTGATCTTACAGGCCATATGTTTTCTAGTTATTTCACCCCTGACACATATGCCAATGAACATTCAGCACGCGCTGCTAGGCTTGCAGCAGGTTTATGTGCTGATCTTGCTTCAGCAATTGTTTCTGGACGTACAAAAAATGGTTTTGCTCTGGTTCGTCCTCCTGGTCATCATGCTGGTATAAAGCAGGCTATGGGGTTTTGCCTCCACAATAATGCAGCAGTTGCTGCATTAGCAGCTCAAGTTTCTGGGGCTAAGAAAGTGCTAATTGTTGATTGGGATGTTCATCATGGGAATGGCACCCAGGAAATATTTGAACAGAACAAATCAGTCCTGTATATATCCTTACATAGACATGAGGGGGGAAAGTTCTATCCTGGTACTGGAGCCGCTGATGAGGTTGGTACCATGGGAGCTGAAGGATACTGTGTGAATGTTCCATGGAGTCGTGGTGGAGTGGGTGATAATGACTATGTTTTCGCATTTCAGCATGTTGTGCTTCCTATAGCTTCTGCATTTGCTCCCGATTTCACCATCATATCAGCAGGATTTGATGCAGCGAGGGGTGATCCTCTAGGATGCTGTGATGTTACTCCTGCCGGCTATGCAAAGATGACTGACATGTTGACTGACTTGTGTGGAGGGAAGTTGTTAGTCATTCTTGAGGGCGGGTACAATCTACGTTCAATATCATCTTCTGCTACTTCAGTAATTAAGGTTTTACTAGGTGAAAGTCCAGGATGTGAATTGGACAACACTTCACCTTCCAGATCTGGACTGCAGACTGTTCTAGAGGTCCTTAAAATTCAAAGTAACTACTGGCCTGTTTTGGCATCCAACTTTACGAAATTGCAGTCACAAGCGAGAATGCACTCTATTGAAAACAAAAGAAAACAAATAGAAAAGAAACGGAGGGCTGTGACTCCAATGTGGTGGAAATGGGGACGGAAGGGTCTATTGTATCATTTTTTAAAGGGGCAAAATCGGCATGCCCATGTGAAGCGAAAGGGTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05034 ko05165 ko05203 map05034 map05165 map05203
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

836

Amino Acids

92.23

Weight (kDa)

5.51

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 450 - 739 1.7e-92 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61415 AT1G61415 AT1G61450
fragaria_vesca FvH4_5g12640 FvH4_5g12640 FvH4_5g12640
malus_domestica MD14G1222400.v1.1
prunus_persica Prupe.5G218000_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0184691
rosa_laevigata RLG00000004959
rosa_multiflora Rmu_ssc0000289.1_g000023
rosa_samantha Rh7AG078500 Rh7BG068800 Rh7CG069600 Rh7DG069000
rosa_wichuraiana Rw7G005690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2445
AatII GACGTC 1 cut(s) 1340
Acc36I ACCTGC 1 cut(s) 1574
Acc65I GGTACC 1 cut(s) 1898
AccB1I GGYRCC 2 cut(s) 1793, 1898
AccB7I CCANNNNNTGG 1 cut(s) 1477
AccII CGCG 3 cut(s) 97, 1450, 1566
AciI CCGC 6 cut(s) 97, 283, 878, 1434, 1884, 2163
AclWI GGATC 3 cut(s) 13, 643, 2057
AcsI RAATTY 7 cut(s) 131, 247, 344, 604, 1167, 1326, 2298
AcuI CTGAAG 4 cut(s) 1445, 1590, 1932, 2184
AcyI GRCGYC 1 cut(s) 1337
AfaI GTAC 8 cut(s) 381, 410, 672, 1016, 1627, 1876, 1900, 2168
AfeI AGCGCT 1 cut(s) 142
AfiI CCNNNNNNNGG 5 cut(s) 785, 1203, 1204, 1477, 1877
AflIII ACRYGT 2 cut(s) 1448, 2115
AjnI CCWGG 7 cut(s) 57, 784, 1411, 1657, 1797, 1870, 2230
AluBI AGCT 9 cut(s) 199, 237, 866, 1376, 1400, 1493, 1733, 1910, 2003
AluI AGCT 9 cut(s) 199, 237, 866, 1376, 1400, 1493, 1733, 1910, 2003
Alw21I GWGCWC 1 cut(s) 201
Alw26I GTCTC 1 cut(s) 284
AlwI GGATC 3 cut(s) 13, 643, 2057
AlwNI CAGNNNCTG 1 cut(s) 1721
Aor51HI AGCGCT 1 cut(s) 142
AoxI GGCC 4 cut(s) 740, 1213, 1507, 2315
ApeKI GCWGC 9 cut(s) 149, 955, 1382, 1568, 1580, 1712, 1721, 1730, 2051
ApoI RAATTY 7 cut(s) 131, 247, 344, 604, 1167, 1326, 2298
ArsI GACNNNNNNTTYG 4 cut(s) 1955, 1987, 2333, 2365
Asp700I GAANNNNTTC 4 cut(s) 693, 846, 1091, 1458
Asp718I GGTACC 1 cut(s) 1898
AspLEI GCGC 2 cut(s) 143, 1568
AspS9I GGNCC 3 cut(s) 741, 1468, 2290
AsuNHI GCTAGC 1 cut(s) 1385
AvaII GGWCC 2 cut(s) 1468, 2290
BanI GGYRCC 2 cut(s) 1793, 1898
BanII GRGCYC 3 cut(s) 201, 391, 1062
BbsI GAAGAC 1 cut(s) 904
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 9 cut(s) 136, 942, 1369, 1555, 1592, 1708, 1724, 1742, 2063
BccI CCATC 4 cut(s) 260, 463, 1459, 2036
BciT130I CCWGG 7 cut(s) 59, 786, 1413, 1659, 1799, 1872, 2232
BciVI GTATCC 1 cut(s) 1910
BclI TGATCA 1 cut(s) 726
BcoDI GTCTC 1 cut(s) 284
BfaI CTAG 7 cut(s) 1386, 1437, 1521, 1572, 2069, 2219, 2285
BfmI CTRYAG 4 cut(s) 240, 1395, 1998, 2273
BfoI RGCGCY 1 cut(s) 144
BfuAI ACCTGC 1 cut(s) 1574
BfuI GTATCC 1 cut(s) 1910
BglII AGATCT 2 cut(s) 496, 2264
Bme1390I CCNGG 7 cut(s) 59, 786, 1413, 1659, 1799, 1872, 2232
Bme18I GGWCC 2 cut(s) 1468, 2290
BmgT120I GGNCC 3 cut(s) 741, 1468, 2290
BmiI GGNNCC 5 cut(s) 743, 1059, 1795, 1882, 1900
BmrFI CCNGG 7 cut(s) 59, 786, 1413, 1659, 1799, 1872, 2232
BmsI GCATC 7 cut(s) 913, 935, 1199, 1351, 2038, 2063, 2336
BmtI GCTAGC 1 cut(s) 1389
BpiI GAAGAC 1 cut(s) 904
BpmI CTGGAG 2 cut(s) 587, 1899
BpuEI CTTGAG 2 cut(s) 1719, 2177
BsaBI GATNNNNATC 2 cut(s) 680, 1779
BsaHI GRCGYC 1 cut(s) 1337
BsaJI CCNNGG 5 cut(s) 307, 1120, 1797, 1902, 1934
BsaXI ACNNNNNCTCC 4 cut(s) 92, 122, 1930, 1960
Bsc4I CCNNNNNNNGG 5 cut(s) 785, 1203, 1204, 1477, 1877
Bse118I RCCGGY 1 cut(s) 2093
Bse1I ACTGG 4 cut(s) 213, 843, 1882, 2318
Bse3DI GCAATG 1 cut(s) 593
Bse8I GATNNNNATC 2 cut(s) 680, 1779
BseBI CCWGG 7 cut(s) 59, 786, 1413, 1659, 1799, 1872, 2232
BseDI CCNNGG 5 cut(s) 307, 1120, 1797, 1902, 1934
BseGI GGATG 9 cut(s) 35, 442, 1045, 1132, 1342, 1780, 2078, 2240, 2327
BseJI GATNNNNATC 2 cut(s) 680, 1779
BseLI CCNNNNNNNGG 5 cut(s) 785, 1203, 1204, 1477, 1877
BseMI GCAATG 1 cut(s) 593
BseMII CTCAG 1 cut(s) 203
BseNI ACTGG 4 cut(s) 213, 843, 1882, 2318
BseXI GCAGC 9 cut(s) 136, 942, 1369, 1555, 1592, 1708, 1724, 1742, 2063
BsgI GTGCAG 2 cut(s) 1081, 1090
Bsh1236I CGCG 3 cut(s) 97, 1450, 1566
BshFI GGCC 4 cut(s) 742, 1215, 1509, 2317
BshNI GGYRCC 2 cut(s) 1793, 1898
BsiHKAI GWGCWC 1 cut(s) 201
BsiSI CCGG 1 cut(s) 2094
BslFI GGGAC 2 cut(s) 299, 2451
BslI CCNNNNNNNGG 5 cut(s) 785, 1203, 1204, 1477, 1877
BsmAI GTCTC 1 cut(s) 284
BsmFI GGGAC 2 cut(s) 299, 2451
BsmI GAATGC 2 cut(s) 667, 2367
BsnI GGCC 4 cut(s) 742, 1215, 1509, 2317
Bsp1286I GDGCHC 3 cut(s) 201, 391, 1062
Bsp1407I TGTACA 1 cut(s) 1014
Bsp19I CCATGG 2 cut(s) 1902, 1934
BspACI CCGC 6 cut(s) 97, 283, 878, 1434, 1884, 2163
BspANI GGCC 4 cut(s) 742, 1215, 1509, 2317
BspCNI CTCAG 1 cut(s) 202
BspFNI CGCG 3 cut(s) 97, 1450, 1566
BspLI GGNNCC 5 cut(s) 743, 1059, 1795, 1882, 1900
BspMAI CTGCAG 1 cut(s) 2277
BspMI ACCTGC 1 cut(s) 1574
BspOI GCTAGC 1 cut(s) 1389
BspPI GGATC 3 cut(s) 13, 643, 2057
BspT107I GGYRCC 2 cut(s) 1793, 1898
BsrDI GCAATG 1 cut(s) 593
BsrFI RCCGGY 1 cut(s) 2093
BsrGI TGTACA 1 cut(s) 1014
BsrI ACTGG 4 cut(s) 213, 843, 1882, 2318
BssAI RCCGGY 1 cut(s) 2093
BssECI CCNNGG 5 cut(s) 307, 1120, 1797, 1902, 1934
BssNI GRCGYC 1 cut(s) 1337
BssT1I CCWWGG 3 cut(s) 1120, 1902, 1934
Bst2UI CCWGG 7 cut(s) 59, 786, 1413, 1659, 1799, 1872, 2232
Bst4CI ACNGT 8 cut(s) 217, 506, 670, 1049, 1280, 1367, 1922, 2281
BstACI GRCGYC 1 cut(s) 1337
BstAPI GCANNNNNTGC 5 cut(s) 1104, 1568, 1718, 1721, 1990
BstAUI TGTACA 1 cut(s) 1014
BstC8I GCNNGC 8 cut(s) 740, 817, 1387, 1564, 1578, 1683, 2095, 2484
BstDEI CTNAG 4 cut(s) 189, 383, 1172, 1749
BstDSI CCRYGG 3 cut(s) 307, 1902, 1934
BstEII GGTNACC 1 cut(s) 211
BstENI CCTNNNNNAGG 1 cut(s) 783
BstF5I GGATG 9 cut(s) 35, 442, 1045, 1132, 1342, 1780, 2078, 2240, 2327
BstFNI CGCG 3 cut(s) 97, 1450, 1566
BstH2I RGCGCY 1 cut(s) 144
BstHHI GCGC 2 cut(s) 143, 1568
BstMAI GTCTC 1 cut(s) 284
BstNI CCWGG 7 cut(s) 59, 786, 1413, 1659, 1799, 1872, 2232
BstNSI RCATGY 5 cut(s) 52, 1487, 1988, 2119, 2486
BstPI GGTNACC 1 cut(s) 211
BstSCI CCNGG 7 cut(s) 57, 784, 1411, 1657, 1797, 1870, 2230
BstSFI CTRYAG 4 cut(s) 240, 1395, 1998, 2273
BstUI CGCG 3 cut(s) 97, 1450, 1566
BstV1I GCAGC 9 cut(s) 136, 942, 1369, 1555, 1592, 1708, 1724, 1742, 2063
BstV2I GAAGAC 1 cut(s) 904
BstX2I RGATCY 2 cut(s) 496, 2264
BstXI CCANNNNNNTGG 1 cut(s) 2427
BstYI RGATCY 2 cut(s) 496, 2264
BsuI GTATCC 1 cut(s) 1910
BsuRI GGCC 4 cut(s) 742, 1215, 1509, 2317
BtgI CCRYGG 3 cut(s) 307, 1902, 1934
BtsCI GGATG 9 cut(s) 35, 442, 1045, 1132, 1342, 1780, 2078, 2240, 2327
BtsIMutI CAGTG 4 cut(s) 511, 631, 819, 1054
BveI ACCTGC 1 cut(s) 1574
Cac8I GCNNGC 8 cut(s) 740, 817, 1387, 1564, 1578, 1683, 2095, 2484
CaiI CAGNNNCTG 1 cut(s) 1721
CfoI GCGC 2 cut(s) 143, 1568
Cfr10I RCCGGY 1 cut(s) 2093
Cfr13I GGNCC 3 cut(s) 741, 1468, 2290
CseI GACGC 2 cut(s) 184, 1260
CsiI ACCWGGT 1 cut(s) 57
Csp6I GTAC 8 cut(s) 380, 409, 671, 1015, 1626, 1875, 1899, 2167
CviQI GTAC 8 cut(s) 380, 409, 671, 1015, 1626, 1875, 1899, 2167
DdeI CTNAG 4 cut(s) 189, 383, 1172, 1749
DraI TTTAAA 1 cut(s) 2466
DrdI GACNNNNNNGTC 1 cut(s) 2445
DseDI GACNNNNNNGTC 1 cut(s) 2445
EciI GGCGGA 1 cut(s) 893
Ecl136II GAGCTC 1 cut(s) 199
Eco130I CCWWGG 3 cut(s) 1120, 1902, 1934
Eco147I AGGCCT 1 cut(s) 1215
Eco24I GRGCYC 3 cut(s) 201, 391, 1062
Eco32I GATATC 1 cut(s) 622
Eco47I GGWCC 2 cut(s) 1468, 2290
Eco47III AGCGCT 1 cut(s) 142
Eco53kI GAGCTC 1 cut(s) 199
Eco57I CTGAAG 4 cut(s) 1445, 1590, 1932, 2184
Eco91I GGTNACC 1 cut(s) 211
EcoICRI GAGCTC 1 cut(s) 199
EcoNI CCTNNNNNAGG 1 cut(s) 783
EcoO109I RGGNCCY 2 cut(s) 741, 2290
EcoO65I GGTNACC 1 cut(s) 211
EcoRI GAATTC 3 cut(s) 131, 344, 1167
EcoRII CCWGG 7 cut(s) 57, 784, 1411, 1657, 1797, 1870, 2230
EcoRV GATATC 1 cut(s) 622
EcoT14I CCWWGG 3 cut(s) 1120, 1902, 1934
EcoT22I ATGCAT 1 cut(s) 928
EcoT38I GRGCYC 3 cut(s) 201, 391, 1062
ErhI CCWWGG 3 cut(s) 1120, 1902, 1934
FalI AAGNNNNNCTT 2 cut(s) 396, 428
FaqI GGGAC 2 cut(s) 299, 2451
FauI CCCGC 4 cut(s) 90, 276, 1441, 2156
FauNDI CATATG 2 cut(s) 1512, 1543
FbaI TGATCA 1 cut(s) 726
FokI GGATG 9 cut(s) 22, 449, 1052, 1139, 1329, 1787, 2085, 2247, 2314
FriOI GRGCYC 3 cut(s) 201, 391, 1062
FspBI CTAG 7 cut(s) 1386, 1437, 1521, 1572, 2069, 2219, 2285
GlaI GCGC 2 cut(s) 142, 1567
GsuI CTGGAG 2 cut(s) 587, 1899
HaeII RGCGCY 1 cut(s) 144
HaeIII GGCC 4 cut(s) 742, 1215, 1509, 2317
HapII CCGG 1 cut(s) 2094
HgaI GACGC 2 cut(s) 184, 1260
HhaI GCGC 2 cut(s) 143, 1568
Hin1I GRCGYC 1 cut(s) 1337
Hin6I GCGC 2 cut(s) 141, 1566
HinP1I GCGC 2 cut(s) 141, 1566
HincII GTYRAC 2 cut(s) 1117, 2121
HindII GTYRAC 2 cut(s) 1117, 2121
HpaII CCGG 1 cut(s) 2094
Hpy166II GTNNAC 5 cut(s) 64, 642, 1015, 1117, 2121
Hpy8I GTNNAC 5 cut(s) 64, 642, 1015, 1117, 2121
Hpy99I CGWCG 1 cut(s) 1342
HpyAV CCTTC 8 cut(s) 37, 250, 346, 422, 532, 1907, 2268, 2437
HpyCH4III ACNGT 8 cut(s) 217, 506, 670, 1049, 1280, 1367, 1922, 2281
HpyCH4IV ACGT 4 cut(s) 183, 1337, 1624, 2176
HpyF3I CTNAG 4 cut(s) 189, 383, 1172, 1749
HpySE526I ACGT 4 cut(s) 183, 1337, 1624, 2176
Hsp92I GRCGYC 1 cut(s) 1337
HspAI GCGC 2 cut(s) 141, 1566
KpnI GGTACC 1 cut(s) 1902
KroI GCCGGC 1 cut(s) 2093
KroNI GCCGGC 1 cut(s) 2095
Ksp22I TGATCA 1 cut(s) 726
LmnI GCTCC 7 cut(s) 14, 629, 1057, 1480, 1880, 1907, 2020
Lsp1109I GCAGC 9 cut(s) 136, 942, 1369, 1555, 1592, 1708, 1724, 1742, 2063
LweI GCATC 7 cut(s) 913, 935, 1199, 1351, 2038, 2063, 2336
MabI ACCWGGT 1 cut(s) 57
MaeI CTAG 7 cut(s) 1386, 1437, 1521, 1572, 2069, 2219, 2285
MaeII ACGT 4 cut(s) 183, 1337, 1624, 2176
MaeIII GTNAC 8 cut(s) 211, 217, 1200, 1257, 2083, 2306, 2349, 2413
MboII GAAGA 8 cut(s) 80, 454, 469, 506, 701, 904, 1466, 2181
MfeI CAATTG 3 cut(s) 1132, 1331, 1611
MflI RGATCY 2 cut(s) 496, 2264
MhlI GDGCHC 3 cut(s) 201, 391, 1062
MluI ACGCGT 1 cut(s) 1448
MlyI GAGTC 5 cut(s) 116, 286, 850, 1948, 2410
MmeI TCCRAC 4 cut(s) 90, 186, 414, 2355
Mph1103I ATGCAT 1 cut(s) 928
MroNI GCCGGC 1 cut(s) 2093
MroXI GAANNNNTTC 4 cut(s) 693, 846, 1091, 1458
MseI TTAA 4 cut(s) 230, 2208, 2295, 2465
MslI CAYNNNNRTG 4 cut(s) 1707, 1788, 1848, 2487
MspA1I CMGCKG 2 cut(s) 1400, 1886
MspI CCGG 1 cut(s) 2094
MspR9I CCNGG 7 cut(s) 59, 786, 1413, 1659, 1799, 1872, 2232
MunI CAATTG 3 cut(s) 1132, 1331, 1611
Mva1269I GAATGC 2 cut(s) 667, 2367
MvaI CCWGG 7 cut(s) 59, 786, 1413, 1659, 1799, 1872, 2232
MvnI CGCG 3 cut(s) 97, 1450, 1566
NaeI GCCGGC 1 cut(s) 2095
NcoI CCATGG 2 cut(s) 1902, 1934
NdeI CATATG 2 cut(s) 1512, 1543
NgoMIV GCCGGC 1 cut(s) 2093
NheI GCTAGC 1 cut(s) 1385
NlaIV GGNNCC 5 cut(s) 743, 1059, 1795, 1882, 1900
NmuCI GTSAC 5 cut(s) 211, 217, 1257, 2349, 2413
NsiI ATGCAT 1 cut(s) 928
NspI RCATGY 5 cut(s) 52, 1487, 1988, 2119, 2486
PaeI GCATGC 1 cut(s) 2486
PceI AGGCCT 1 cut(s) 1215
PciI ACATGT 1 cut(s) 2115
PctI GAATGC 2 cut(s) 667, 2367
PdiI GCCGGC 1 cut(s) 2095
PdmI GAANNNNTTC 4 cut(s) 693, 846, 1091, 1458
PfeI GAWTC 9 cut(s) 8, 158, 303, 487, 681, 1160, 1208, 1229, 1265
PflMI CCANNNNNTGG 1 cut(s) 1477
PfoI TCCNGGA 2 cut(s) 1411, 2230
PleI GAGTC 5 cut(s) 115, 286, 850, 1947, 2410
PpsI GAGTC 5 cut(s) 115, 286, 850, 1947, 2410
PpuMI RGGWCCY 1 cut(s) 2290
PscI ACATGT 1 cut(s) 2115
Psp124BI GAGCTC 1 cut(s) 201
Psp5II RGGWCCY 1 cut(s) 2290
Psp6I CCWGG 7 cut(s) 57, 784, 1411, 1657, 1797, 1870, 2230
PspEI GGTNACC 1 cut(s) 211
PspGI CCWGG 7 cut(s) 57, 784, 1411, 1657, 1797, 1870, 2230
PspN4I GGNNCC 5 cut(s) 743, 1059, 1795, 1882, 1900
PspPI GGNCC 3 cut(s) 741, 1468, 2290
PspPPI RGGWCCY 1 cut(s) 2290
PstI CTGCAG 1 cut(s) 2277
PstNI CAGNNNCTG 1 cut(s) 1721
PsuI RGATCY 2 cut(s) 496, 2264
PvuII CAGCTG 1 cut(s) 1400
RsaI GTAC 8 cut(s) 381, 410, 672, 1016, 1627, 1876, 1900, 2168
RsaNI GTAC 8 cut(s) 380, 409, 671, 1015, 1626, 1875, 1899, 2167
RseI CAYNNNNRTG 4 cut(s) 1707, 1788, 1848, 2487
SacI GAGCTC 1 cut(s) 201
SaqAI TTAA 4 cut(s) 230, 2208, 2295, 2465
Sau96I GGNCC 3 cut(s) 741, 1468, 2290
SchI GAGTC 5 cut(s) 116, 286, 850, 1948, 2410
ScrFI CCNGG 7 cut(s) 59, 786, 1413, 1659, 1799, 1872, 2232
SduI GDGCHC 3 cut(s) 201, 391, 1062
SexAI ACCWGGT 1 cut(s) 57
SfaNI GCATC 7 cut(s) 913, 935, 1199, 1351, 2038, 2063, 2336
SfcI CTRYAG 4 cut(s) 240, 1395, 1998, 2273
SinI GGWCC 2 cut(s) 1468, 2290
SmiMI CAYNNNNRTG 4 cut(s) 1707, 1788, 1848, 2487
SmlI CTYRAG 2 cut(s) 1734, 2156
SmoI CTYRAG 2 cut(s) 1734, 2156
SphI GCATGC 1 cut(s) 2486
SseBI AGGCCT 1 cut(s) 1215
SsiI CCGC 6 cut(s) 97, 283, 878, 1434, 1884, 2163
SspI AATATT 2 cut(s) 85, 1806
SspMI CTAG 7 cut(s) 1386, 1437, 1521, 1572, 2069, 2219, 2285
SstI GAGCTC 1 cut(s) 201
StuI AGGCCT 1 cut(s) 1215
StyD4I CCNGG 7 cut(s) 57, 784, 1411, 1657, 1797, 1870, 2230
StyI CCWWGG 3 cut(s) 1120, 1902, 1934
TaaI ACNGT 8 cut(s) 217, 506, 670, 1049, 1280, 1367, 1922, 2281
TaiI ACGT 4 cut(s) 186, 1340, 1627, 2179
TaqI TCGA 5 cut(s) 105, 135, 929, 1029, 1372
TatI WGTACW 3 cut(s) 379, 670, 1014
TauI GCSGC 1 cut(s) 1886
TfiI GAWTC 9 cut(s) 8, 158, 303, 487, 681, 1160, 1208, 1229, 1265
Tru1I TTAA 4 cut(s) 230, 2208, 2295, 2465
Tru9I TTAA 4 cut(s) 230, 2208, 2295, 2465
TscAI CASTG 4 cut(s) 511, 631, 826, 1054
TseFI GTSAC 5 cut(s) 211, 217, 1257, 2349, 2413
TseI GCWGC 9 cut(s) 149, 955, 1382, 1568, 1580, 1712, 1721, 1730, 2051
Tsp45I GTSAC 5 cut(s) 211, 217, 1257, 2349, 2413
TspDTI ATGAA 6 cut(s) 435, 582, 599, 921, 1566, 1769
TspGWI ACGGA 3 cut(s) 324, 2419, 2455
TspRI CASTG 4 cut(s) 511, 631, 826, 1054
Van91I CCANNNNNTGG 1 cut(s) 1477
VpaK11BI GGWCC 2 cut(s) 1468, 2290
XagI CCTNNNNNAGG 1 cut(s) 783
XapI RAATTY 7 cut(s) 131, 247, 344, 604, 1167, 1326, 2298
XbaI TCTAGA 1 cut(s) 2284
XceI RCATGY 5 cut(s) 52, 1487, 1988, 2119, 2486
XcmI CCANNNNNNNNNTGG 1 cut(s) 1108
XmnI GAANNNNTTC 4 cut(s) 693, 846, 1091, 1458
XspI CTAG 7 cut(s) 1386, 1437, 1521, 1572, 2069, 2219, 2285
ZraI GACGTC 1 cut(s) 1338
Zsp2I ATGCAT 1 cut(s) 928
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.