AT1G62740
HSP70 Family

hsp70-Hsp90 organizing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011330
Physical Location & Seq
Forward (+)
23230922 .. 23233543
2622 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G62740.1

Sequence Viewer

Length: 1716 bp
ATGGCGGACGAAGCAAAAGCTAAAGGAAACGCAGCTTTCTCCTCCGGTGACTTCAATTCCGCCGTTAATCACTTCACCGACGCAATCAACCTAACACCAACCAATCACGTTCTCTTCTCAAACCGTTCCGCTGCTCACGCATCGCTTAATCACTACGACGAAGCTCTCTCAGACGCGAAGAAGACTGTTGAACTTAAACCAGATTGGGGAAAAGGTTATAGCCGTCTCGGTGCTGCTCACTTAGGTCTAAATCAGTTCGATGAAGCCGTGGAGGCGTATTCGAAAGGGCTTGAGATTGATCCAAGTAACGAAGGTTTGAAATCAGGTTTAGCTGATGCGAAAGCTTCTGCGTCTAGGTCACGCGCTTCCGCGCCCAATCCGTTTGGTGATGCTTTTCAGGGACCGGAGATGTGGTCGAAATTGACGGCGGATCCTTCTACTAGAGGGTTATTGAAACAGCCTGATTTTGTTAATATGATGAAGGAGATTCAGAGGAACCCTAGTAATCTTAATCTTTATTTGCAAGATCAGAGAGTTATGCAAGCTCTTGGAGTTTTGTTGAATATTCAAATCAGGACTCAACAGGCTGGTGATGATATGGAGATTGGTGAGGAAGAGATGGCTGTGCCTTCTAGGAAGGAGCCTGAGGTAGAGAAGAAACGAAAACCTGAGCCTGAGCCTGAGCCTGAGCCGGAGTTTGGAGAAGAGAAGCAGAAGAAGCTTAAAGCTCAGAAGGAGAAAGAGTTGGGGAATGCTGCGTATAAGAAGAAGGACTTCGAAACTGCAATCCAGCATTACTCTACAGCTATGGAGATTGATGATGAAGATATCTCTTATATCACTAATCGTGCTGCTGTTCATCTAGAGATGGGAAAGTATGATGAGTGTATCAAGGATTGTGATAAGGCTGTTGAAAGGGGTAGAGAGCTTAGGTCTGATTACAAGATGGTGGCTAAAGCTTTGACTAGGAAAGGAACTGCTTTAGGGAAGATGGCTAAAGTCTCGAAAGACTATGAACCTGTGATTCAGACTTACCAGAAAGCTCTTACGGAGCATCGTAACCCTGAAACATTGAAGAGACTGAATGAGGCAGAGAGAGCAAAGAAAGAGTTGGAGCAGCAAGAGTACTATGATCCTAATATCGGTGATGAGGAGCGTGAGAAAGGTAATGACTTTTTTAAGGAGCAAAAGTATCCTGATGCTGTGAGACATTACACTGAAGCGATCAAGAGGAATCCAAAAGACCCGAGAGCATATAGCAACCGGGCTGCATGTTACACTAAACTGGGGGCAATGCCCGAAGGATTAAAAGATGCAGAGAAATGTATCGAGCTCGATCCAACATTCTTAAAGGGATACAGTAGAAAAGGTGCAGTCCAGTTCTTCATGAAGGAGTATGACAATGCAATGGAAACGTACCAGAAGGGTCTCGAACATGATCCTAATAACCAGGAACTTCTTGATGGTGTTAAAAGATGTGTACAACAGATAAACAAGGCAAACCGTGGCGACCTTACTCCTGAGGAATTGAAAGAAAGACAGGCTAAGGGAATGCAAGACCCAGAAATTCAGAACATTCTCACAGATCCTGTAATGAGACAGGTACTGTCTGATCTCCAGGAGAATCCAGCAGCAGCACAAAAGCACATGCAGAACCCAATGATCATGAACAAAATCCAAAAGCTTATCAGCTCAGGAATCGTCCAGATGAAATAA

Protein Analysis

571

Amino Acids

64.52

Weight (kDa)

5.85

Isoelectric Point (pI)

39.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_BSK1_C PF25575 4 - 70 3.6e-07 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_1 PF00515 71 - 103 2e-08 Tetratricopeptide repeat
TPR_2 PF07719 71 - 103 2.9e-06 Tetratricopeptide repeat
STI1-HOP_DP PF17830 135 - 187 1.2e-20 STI1/HOP, DP domain
TPR_BSK1_C PF25575 232 - 305 2.8e-06 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_16 PF13432 388 - 439 4.5e-07 Tetratricopeptide repeat
TPR_11 PF13414 389 - 430 1.3e-08 TPR repeat
TPR_1 PF00515 416 - 449 1.7e-06 Tetratricopeptide repeat
TPR_1 PF00515 451 - 483 6.5e-07 Tetratricopeptide repeat
STI1-HOP_DP PF17830 512 - 564 7.4e-17 STI1/HOP, DP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011330)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62740 AT4G12400 AT4G12400
fragaria_vesca FvH4_5g00400 FvH4_5g00400 FvH4_5g00400
malus_domestica MD04G1081900.v1.1 MD06G1065400.v1.1
prunus_persica Prupe.5G076500_v2.0.a1
pyrus_communis pycom04g07380 pycom06g05640
rosa_chinensis RchiOBHm_Chr7g0202131
rosa_laevigata RLG00000003623
rosa_multiflora Rmu_ssc0000228.1_g000003
rosa_roxburghii Rroxscaffold_3G00254830
rosa_rugosa Rorug07G0068200 Rorug07G0068300
rosa_samantha Rh7AG195700 Rh7CG206800
rosa_wichuraiana Rw7G017140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 176, 363, 371
AciI CCGC 5 cut(s) 5, 60, 129, 369, 428
AclWI GGATC 7 cut(s) 293, 425, 438, 1127, 1331, 1433, 1580
AcsI RAATTY 1 cut(s) 1566
AcuI CTGAAG 1 cut(s) 1239
AfaI GTAC 4 cut(s) 1127, 1418, 1482, 1605
AfiI CCNNNNNNNGG 3 cut(s) 206, 698, 1142
AgsI TTSAA 9 cut(s) 55, 191, 319, 454, 562, 569, 914, 1075, 1531
AjnI CCWGG 2 cut(s) 1449, 1617
Alw21I GWGCWC 1 cut(s) 1335
Alw26I GTCTC 6 cut(s) 230, 1006, 1072, 1201, 1433, 1591
AlwI GGATC 7 cut(s) 293, 425, 438, 1127, 1331, 1433, 1580
AlwNI CAGNNNCTG 2 cut(s) 1589, 1606
Ama87I CYCGRG 1 cut(s) 1246
ApeKI GCWGC 9 cut(s) 32, 131, 233, 755, 851, 1117, 1268, 1631, 1634
ApoI RAATTY 1 cut(s) 1566
Asp700I GAANNNNTTC 1 cut(s) 773
AspLEI GCGC 2 cut(s) 365, 373
AspS9I GGNCC 1 cut(s) 401
AsuC2I CCSGG 1 cut(s) 1265
AsuHPI GGTGA 6 cut(s) 59, 67, 398, 602, 620, 1157
AsuII TTCGAA 2 cut(s) 281, 777
AvaI CYCGRG 1 cut(s) 1246
AvaII GGWCC 1 cut(s) 401
AxyI CCTNAGG 2 cut(s) 645, 1521
BamHI GGATCC 1 cut(s) 430
BanII GRGCYC 1 cut(s) 1335
BbsI GAAGAC 1 cut(s) 188
Bbv12I GWGCWC 1 cut(s) 1335
BbvI GCAGC 9 cut(s) 44, 118, 220, 742, 838, 1129, 1255, 1643, 1646
BccI CCATC 5 cut(s) 613, 862, 940, 985, 1457
BceAI ACGGC 4 cut(s) 47, 207, 251, 441
BciT130I CCWGG 2 cut(s) 1451, 1619
BciVI GTATCC 2 cut(s) 1203, 1349
BclI TGATCA 1 cut(s) 1662
BcnI CCSGG 1 cut(s) 1265
BcoDI GTCTC 6 cut(s) 230, 1006, 1072, 1201, 1433, 1591
BfaI CTAG 6 cut(s) 354, 441, 501, 633, 863, 966
BfmI CTRYAG 1 cut(s) 801
BfuI GTATCC 2 cut(s) 1203, 1349
BglI GCCNNNNNGGC 1 cut(s) 272
BisI GCNGC 9 cut(s) 33, 132, 234, 756, 852, 1118, 1269, 1632, 1635
BlsI GCNGC 9 cut(s) 34, 133, 235, 757, 853, 1119, 1270, 1633, 1636
BmcAI AGTACT 1 cut(s) 1127
Bme1390I CCNGG 3 cut(s) 1265, 1451, 1619
Bme18I GGWCC 1 cut(s) 401
BmeT110I CYCGRG 1 cut(s) 1246
BmgT120I GGNCC 1 cut(s) 401
BmiI GGNNCC 4 cut(s) 402, 432, 497, 642
BmrFI CCNGG 3 cut(s) 1265, 1451, 1619
BmrI ACTGGG 1 cut(s) 1295
BmsI GCATC 6 cut(s) 149, 325, 379, 1063, 1189, 1303
BmuI ACTGGG 1 cut(s) 1295
BpiI GAAGAC 1 cut(s) 188
BpmI CTGGAG 1 cut(s) 1601
Bpu10I CCTNAGC 7 cut(s) 669, 675, 681, 687, 929, 1545, 1693
Bpu14I TTCGAA 2 cut(s) 281, 777
BpuEI CTTGAG 1 cut(s) 311
BpuMI CCSGG 1 cut(s) 1265
BsaI GGTCTC 1 cut(s) 1433
BsaJI CCNNGG 2 cut(s) 267, 1504
BsaWI WCCGGW 2 cut(s) 44, 403
BsaXI ACNNNNNCTCC 6 cut(s) 398, 428, 728, 758, 1175, 1205
Bsc4I CCNNNNNNNGG 3 cut(s) 206, 698, 1142
Bse1I ACTGG 2 cut(s) 1290, 1378
Bse21I CCTNAGG 2 cut(s) 645, 1521
Bse3DI GCAATG 2 cut(s) 1299, 1413
BseBI CCWGG 2 cut(s) 1451, 1619
BseDI CCNNGG 2 cut(s) 267, 1504
BseLI CCNNNNNNNGG 3 cut(s) 206, 698, 1142
BseMI GCAATG 2 cut(s) 1299, 1413
BseMII CTCAG 9 cut(s) 183, 636, 660, 666, 672, 678, 743, 1512, 1707
BseNI ACTGG 2 cut(s) 1290, 1378
BseRI GAGGAG 2 cut(s) 31, 1166
BseXI GCAGC 9 cut(s) 44, 118, 220, 742, 838, 1129, 1255, 1643, 1646
BsgI GTGCAG 1 cut(s) 1392
Bsh1236I CGCG 3 cut(s) 176, 363, 371
BsiHKAI GWGCWC 1 cut(s) 1335
BsiHKCI CYCGRG 1 cut(s) 1246
BsiSI CCGG 4 cut(s) 45, 404, 692, 1264
BslFI GGGAC 1 cut(s) 414
BslI CCNNNNNNNGG 3 cut(s) 206, 698, 1142
BsmAI GTCTC 6 cut(s) 230, 1006, 1072, 1201, 1433, 1591
BsmBI CGTCTC 1 cut(s) 230
BsmFI GGGAC 1 cut(s) 414
BsmI GAATGC 2 cut(s) 757, 1557
Bso31I GGTCTC 1 cut(s) 1433
BsoBI CYCGRG 1 cut(s) 1246
Bsp119I TTCGAA 2 cut(s) 281, 777
Bsp1286I GDGCHC 1 cut(s) 1335
Bsp1407I TGTACA 1 cut(s) 1480
BspACI CCGC 5 cut(s) 5, 60, 129, 369, 428
BspCNI CTCAG 9 cut(s) 182, 637, 661, 667, 673, 679, 742, 1513, 1706
BspFNI CGCG 3 cut(s) 176, 363, 371
BspHI TCATGA 2 cut(s) 1386, 1665
BspLI GGNNCC 4 cut(s) 402, 432, 497, 642
BspPI GGATC 7 cut(s) 293, 425, 438, 1127, 1331, 1433, 1580
BspT104I TTCGAA 2 cut(s) 281, 777
BspTNI GGTCTC 1 cut(s) 1433
BsrDI GCAATG 2 cut(s) 1299, 1413
BsrGI TGTACA 1 cut(s) 1480
BsrI ACTGG 2 cut(s) 1290, 1378
BssECI CCNNGG 2 cut(s) 267, 1504
Bst2UI CCWGG 2 cut(s) 1451, 1619
Bst4CI ACNGT 5 cut(s) 125, 187, 1361, 1505, 1608
Bst6I CTCTTC 4 cut(s) 119, 609, 699, 1070
BstAUI TGTACA 1 cut(s) 1480
BstBI TTCGAA 2 cut(s) 281, 777
BstC8I GCNNGC 1 cut(s) 543
BstDSI CCRYGG 2 cut(s) 267, 1504
BstFNI CGCG 3 cut(s) 176, 363, 371
BstHHI GCGC 2 cut(s) 365, 373
BstMAI GTCTC 6 cut(s) 230, 1006, 1072, 1201, 1433, 1591
BstMWI GCNNNNNNNGC 5 cut(s) 11, 137, 272, 718, 1097
BstNI CCWGG 2 cut(s) 1451, 1619
BstNSI RCATGY 2 cut(s) 1275, 1651
BstSCI CCNGG 3 cut(s) 1263, 1449, 1617
BstSFI CTRYAG 1 cut(s) 801
BstUI CGCG 3 cut(s) 176, 363, 371
BstV1I GCAGC 9 cut(s) 44, 118, 220, 742, 838, 1129, 1255, 1643, 1646
BstV2I GAAGAC 1 cut(s) 188
BstX2I RGATCY 2 cut(s) 430, 1585
BstYI RGATCY 2 cut(s) 430, 1585
Bsu36I CCTNAGG 2 cut(s) 645, 1521
BsuI GTATCC 2 cut(s) 1203, 1349
BtgI CCRYGG 2 cut(s) 267, 1504
BtgZI GCGATG 1 cut(s) 126
BtsIMutI CAGTG 1 cut(s) 1215
Cac8I GCNNGC 1 cut(s) 543
CaiI CAGNNNCTG 2 cut(s) 1589, 1606
CciI TCATGA 2 cut(s) 1386, 1665
CfoI GCGC 2 cut(s) 365, 373
Cfr13I GGNCC 1 cut(s) 401
CseI GACGC 3 cut(s) 89, 182, 339
Csp6I GTAC 4 cut(s) 1126, 1417, 1481, 1604
CviAII CATG 5 cut(s) 1272, 1387, 1436, 1648, 1666
CviQI GTAC 4 cut(s) 1126, 1417, 1481, 1604
Eam1104I CTCTTC 4 cut(s) 119, 609, 699, 1070
EarI CTCTTC 4 cut(s) 119, 609, 699, 1070
EciI GGCGGA 3 cut(s) 20, 49, 443
Ecl136II GAGCTC 1 cut(s) 1333
Eco24I GRGCYC 1 cut(s) 1335
Eco31I GGTCTC 1 cut(s) 1433
Eco32I GATATC 1 cut(s) 829
Eco47I GGWCC 1 cut(s) 401
Eco53kI GAGCTC 1 cut(s) 1333
Eco57I CTGAAG 1 cut(s) 1239
Eco81I CCTNAGG 2 cut(s) 645, 1521
Eco88I CYCGRG 1 cut(s) 1246
EcoICRI GAGCTC 1 cut(s) 1333
EcoRII CCWGG 2 cut(s) 1449, 1617
EcoRV GATATC 1 cut(s) 829
EcoT38I GRGCYC 1 cut(s) 1335
Esp3I CGTCTC 1 cut(s) 230
FaeI CATG 5 cut(s) 1275, 1390, 1439, 1651, 1669
FalI AAGNNNNNCTT 2 cut(s) 758, 790
FaqI GGGAC 1 cut(s) 414
FatI CATG 5 cut(s) 1271, 1386, 1435, 1647, 1665
FbaI TGATCA 1 cut(s) 1662
Fnu4HI GCNGC 9 cut(s) 33, 132, 234, 756, 852, 1118, 1269, 1632, 1635
FriOI GRGCYC 1 cut(s) 1335
Fsp4HI GCNGC 9 cut(s) 33, 132, 234, 756, 852, 1118, 1269, 1632, 1635
FspBI CTAG 6 cut(s) 354, 441, 501, 633, 863, 966
GlaI GCGC 2 cut(s) 364, 372
GluI GCNGC 9 cut(s) 33, 132, 234, 756, 852, 1118, 1269, 1632, 1635
GsuI CTGGAG 1 cut(s) 1601
HapII CCGG 4 cut(s) 45, 404, 692, 1264
HgaI GACGC 3 cut(s) 89, 182, 339
HhaI GCGC 2 cut(s) 365, 373
Hin1II CATG 5 cut(s) 1275, 1390, 1439, 1651, 1669
Hin6I GCGC 2 cut(s) 363, 371
HinP1I GCGC 2 cut(s) 363, 371
HindIII AAGCTT 4 cut(s) 342, 719, 957, 1682
HinfI GANTC 6 cut(s) 487, 577, 1024, 1234, 1624, 1698
HpaII CCGG 4 cut(s) 45, 404, 692, 1264
HphI GGTGA 6 cut(s) 59, 67, 398, 602, 620, 1157
Hpy166II GTNNAC 1 cut(s) 1481
Hpy188I TCNGA 8 cut(s) 172, 492, 531, 732, 937, 1029, 1572, 1612
Hpy8I GTNNAC 1 cut(s) 1481
Hpy99I CGWCG 2 cut(s) 83, 161
HpyCH4III ACNGT 5 cut(s) 125, 187, 1361, 1505, 1608
HpyCH4IV ACGT 2 cut(s) 108, 1415
HpyCH4V TGCA 9 cut(s) 523, 541, 785, 1271, 1316, 1373, 1406, 1555, 1651
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 137, 272, 718, 1097
HpySE526I ACGT 2 cut(s) 108, 1415
Hsp92II CATG 5 cut(s) 1275, 1390, 1439, 1651, 1669
HspAI GCGC 2 cut(s) 363, 371
Ksp22I TGATCA 1 cut(s) 1662
LmnI GCTCC 5 cut(s) 640, 1051, 1114, 1153, 1183
Lsp1109I GCAGC 9 cut(s) 44, 118, 220, 742, 838, 1129, 1255, 1643, 1646
LweI GCATC 6 cut(s) 149, 325, 379, 1063, 1189, 1303
MaeI CTAG 6 cut(s) 354, 441, 501, 633, 863, 966
MaeII ACGT 2 cut(s) 108, 1415
MaeIII GTNAC 5 cut(s) 47, 305, 357, 1058, 1274
MflI RGATCY 2 cut(s) 430, 1585
MhlI GDGCHC 1 cut(s) 1335
MluCI AATT 4 cut(s) 55, 419, 1526, 1566
MlyI GAGTC 1 cut(s) 571
MmeI TCCRAC 2 cut(s) 1092, 1364
MroXI GAANNNNTTC 1 cut(s) 773
MspA1I CMGCKG 1 cut(s) 131
MspI CCGG 4 cut(s) 45, 404, 692, 1264
MspR9I CCNGG 3 cut(s) 1265, 1451, 1619
Mva1269I GAATGC 2 cut(s) 757, 1557
MvaI CCWGG 2 cut(s) 1451, 1619
MvnI CGCG 3 cut(s) 176, 363, 371
MwoI GCNNNNNNNGC 5 cut(s) 11, 137, 272, 718, 1097
NciI CCSGG 1 cut(s) 1265
NlaIII CATG 5 cut(s) 1275, 1390, 1439, 1651, 1669
NlaIV GGNNCC 4 cut(s) 402, 432, 497, 642
NmuCI GTSAC 2 cut(s) 47, 357
NspI RCATGY 2 cut(s) 1275, 1651
NspV TTCGAA 2 cut(s) 281, 777
PagI TCATGA 2 cut(s) 1386, 1665
PcsI WCGNNNNNNNCGW 1 cut(s) 264
PctI GAATGC 2 cut(s) 757, 1557
PdmI GAANNNNTTC 1 cut(s) 773
PfeI GAWTC 5 cut(s) 487, 1024, 1234, 1624, 1698
PfoI TCCNGGA 1 cut(s) 1617
PkrI GCNGC 9 cut(s) 34, 133, 235, 757, 853, 1119, 1270, 1633, 1636
PleI GAGTC 1 cut(s) 571
PpsI GAGTC 1 cut(s) 571
Psp124BI GAGCTC 1 cut(s) 1335
Psp6I CCWGG 2 cut(s) 1449, 1617
PspGI CCWGG 2 cut(s) 1449, 1617
PspN4I GGNNCC 4 cut(s) 402, 432, 497, 642
PspPI GGNCC 1 cut(s) 401
PstNI CAGNNNCTG 2 cut(s) 1589, 1606
PsuI RGATCY 2 cut(s) 430, 1585
RsaI GTAC 4 cut(s) 1127, 1418, 1482, 1605
RsaNI GTAC 4 cut(s) 1126, 1417, 1481, 1604
SacI GAGCTC 1 cut(s) 1335
SatI GCNGC 9 cut(s) 33, 132, 234, 756, 852, 1118, 1269, 1632, 1635
Sau96I GGNCC 1 cut(s) 401
ScaI AGTACT 1 cut(s) 1127
SchI GAGTC 1 cut(s) 571
ScrFI CCNGG 3 cut(s) 1265, 1451, 1619
SduI GDGCHC 1 cut(s) 1335
SfaNI GCATC 6 cut(s) 149, 325, 379, 1063, 1189, 1303
SfcI CTRYAG 1 cut(s) 801
SfuI TTCGAA 2 cut(s) 281, 777
SinI GGWCC 1 cut(s) 401
SmlI CTYRAG 1 cut(s) 290
SmoI CTYRAG 1 cut(s) 290
Sse9I AATT 4 cut(s) 55, 419, 1526, 1566
SsiI CCGC 5 cut(s) 5, 60, 129, 369, 428
SspI AATATT 1 cut(s) 565
SspMI CTAG 6 cut(s) 354, 441, 501, 633, 863, 966
SstI GAGCTC 1 cut(s) 1335
StyD4I CCNGG 3 cut(s) 1263, 1449, 1617
TaaI ACNGT 5 cut(s) 125, 187, 1361, 1505, 1608
TaiI ACGT 2 cut(s) 111, 1418
TaqI TCGA 8 cut(s) 258, 281, 416, 777, 1004, 1329, 1335, 1431
TasI AATT 4 cut(s) 55, 419, 1526, 1566
TatI WGTACW 2 cut(s) 1125, 1480
TfiI GAWTC 5 cut(s) 487, 1024, 1234, 1624, 1698
TscAI CASTG 1 cut(s) 1222
TseFI GTSAC 2 cut(s) 47, 357
TseI GCWGC 9 cut(s) 32, 131, 233, 755, 851, 1117, 1268, 1631, 1634
Tsp45I GTSAC 2 cut(s) 47, 357
TspDTI ATGAA 8 cut(s) 276, 494, 837, 848, 1029, 1375, 1403, 1682
TspGWI ACGGA 2 cut(s) 369, 1064
TspRI CASTG 1 cut(s) 1222
VpaK11BI GGWCC 1 cut(s) 401
XapI RAATTY 1 cut(s) 1566
XbaI TCTAGA 1 cut(s) 862
XceI RCATGY 2 cut(s) 1275, 1651
XmnI GAANNNNTTC 1 cut(s) 773
XspI CTAG 6 cut(s) 354, 441, 501, 633, 863, 966
ZrmI AGTACT 1 cut(s) 1127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.