MD04G1081900.v1.1
HSP70 Family

hsp70-Hsp90 organizing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0011330
Physical Location & Seq
Reverse (-)
11295989 .. 11299042
3054 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1081900.v1.1.491

Sequence Viewer

Length: 1737 bp
ATGGCCGACGAAGCCAAAGCCAAAGGCAACGCCGCTTTCTCCTCCGGCGACTTCAACGCCGCCGTCACCCACTTCACGGAAGCCATCGACCTCGCTCCCTCCAACCATGTCCTCTACTCCAACCGATCCGCCGCCTATGCCTCTCTCAACAAATACTCTGAAGCCCTAGCCGACGCCAAGAAGACCGTCGAGATTAAGCCTGATTGGTCCAAAGGTTACAGCCGGCTCGGCGCCGCTCACTGCGGATTGGGCCAGTACGACGACGCCGTTTCGGCTTACAAGAAGGGTCTCGAGATCGACCCCAATAACGAGGCTCTGAAGTCTGGTTTAGCCGACGCTCAAGCCGGTGCGACCCGGTCACGGGCTGGACCCCCGCCTATGAACCCGTTTGGGGATGCGTTCTCGGGTCCCGAGATGTGGGCCAAGCTCACTGCCGACCCGTCGACCCGTGCCTTCTTGCAGCAACCCGATTTTGTGAAGATGATGCAGGAGATTCAGAAAAACCCTAGCAATCTCAATTTGTATTTGAAGGACCAGAGGGTTATGCAAGCCCTGGGGGTTTTGCTTAACGTGAAGTTGCGCGGTGGGACGGGGGCGGAGGATGAGGAGGTGCCGGAGTCTCCGCCGGAGCGGAAGCAGCCTGAGCCCTGGAAGGAGGAGAAGAAGCCGGAGCATCAGCCGGAGCCAGAGCCGGAGCCGATGGAGGTGAGTGAGGAGGAGAGTGAGGCGAAGAAGAGGAAGGCCGAGGCAATAAAGGAGAAGGAGGCTGGCAATGCGGCTTATAAGCAGAAGGACTTCGACACAGCGATTCAGCACTACACCAAGGCTATTGAGTTGAATGATGAGGACATTTCATTTATCTTGAATCGTGCAGCGACGTATTTGGAAATGGGTCAGTATGAGGAGTGTATTAAAGACTGTGAGAAGGCTGTGGAAAGGGGAAGAGAGCTAAGGTCAGACTTTAAGATGGTGGCAAAAGCTTTGACTAGGAAGGGAACCGCCTTGGTGAAGATGGCAAAATGCTCGAAGGACTTTGAACCTGCCATTGAGTCGTTCCAGAAAGCTCTCACAGAGCACCGCAACCCAGATACCTTAAGGAAATTGAACGAAGCTGAGAAAGCAAAGAAGGATCTAGAGCAACAAGAGTATTATGATCCAAAGTTAGCCGATGAAGAGCGTGAGAAAGGTAATGAATATTTCAAGCAACAAAAGTACCCAGAGGCTATTAAGCAGTACACTGAAGCTCTCAGAAGGAACCCCAAGGATCCAAAGGCATATAGCAACAGAGCTGCATGCTATACAAAACTCGGGGCAATGCCCGAGGGATTGAAAGATGCAGAGAAGTGCATCGAGCTTGATCCAACCTTTACAAAGGGTTATACCAGAAAAGGTGCCGTCCAGTTTTTCATGAAAGAATATGAGAAAGCTTTGGAAACATACCAGGAGGGTTTGAAACACGATCCTAGCAACCAGGAATTGCTTGATGGTGTGCGAAGATGCGTAGAGCAAATTAACAAAGCTAGCCGTGGGGATTTGACTCCCGAGGAATTGAAGGAGAGACAGGCTAAAGGAATGCAGGACCCAGAAATTCAAAATATTCTCCAAGATCCTGTTATGAGACAGGTGTTAACCGATTTCCAGGAGAATCCCAAGGCTGCTCAGGAACACACGAAGAACCCAATGGTGATGAGCAAGATCCAGAAGCTCGTCAGTGCGGGAATTGTCCAGCTTCGGTAA

Protein Analysis

579

Amino Acids

65.11

Weight (kDa)

5.73

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_BSK1_C PF25575 4 - 71 8.2e-09 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_1 PF00515 71 - 103 2.2e-08 Tetratricopeptide repeat
TPR_2 PF07719 71 - 103 6.8e-07 Tetratricopeptide repeat
STI1-HOP_DP PF17830 137 - 189 6.5e-23 STI1/HOP, DP domain
TPR_BSK1_C PF25575 245 - 315 1.1e-08 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_1 PF00515 257 - 282 1.6e-06 Tetratricopeptide repeat
TPR_11 PF13414 257 - 298 7.5e-07 TPR repeat
TPR_12 PF13424 287 - 356 5.4e-06 Tetratricopeptide repeat
TPR_1 PF00515 289 - 312 7.8e-06 Tetratricopeptide repeat
TPR_BSK1_C PF25575 369 - 456 9.5e-06 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_1 PF00515 395 - 422 6.6e-07 Tetratricopeptide repeat
TPR_16 PF13432 395 - 446 7.1e-08 Tetratricopeptide repeat
TPR_11 PF13414 396 - 437 3.9e-11 TPR repeat
TPR_1 PF00515 423 - 456 1.2e-06 Tetratricopeptide repeat
TPR_1 PF00515 458 - 490 8.2e-07 Tetratricopeptide repeat
STI1-HOP_DP PF17830 519 - 570 9.6e-16 STI1/HOP, DP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011330)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62740 AT4G12400 AT4G12400
fragaria_vesca FvH4_5g00400 FvH4_5g00400 FvH4_5g00400
malus_domestica MD04G1081900.v1.1 MD06G1065400.v1.1
prunus_persica Prupe.5G076500_v2.0.a1
pyrus_communis pycom04g07380 pycom06g05640
rosa_chinensis RchiOBHm_Chr7g0202131
rosa_laevigata RLG00000003623
rosa_multiflora Rmu_ssc0000228.1_g000003
rosa_roxburghii Rroxscaffold_3G00254830
rosa_rugosa Rorug07G0068200 Rorug07G0068300
rosa_samantha Rh7AG195700 Rh7CG206800
rosa_wichuraiana Rw7G017140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
Acc36I ACCTGC 1 cut(s) 1048
AccB1I GGYRCC 3 cut(s) 230, 610, 1391
AccBSI CCGCTC 2 cut(s) 236, 631
AccI GTMKAC 1 cut(s) 443
AccII CGCG 1 cut(s) 582
AclWI GGATC 9 cut(s) 120, 1137, 1148, 1259, 1272, 1352, 1454, 1601, 1690
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 1587
AcuI CTGAAG 3 cut(s) 180, 338, 1260
AcyI GRCGYC 3 cut(s) 174, 231, 264
AfaI GTAC 3 cut(s) 257, 1214, 1235
AfiI CCNNNNNNNGG 5 cut(s) 76, 360, 361, 391, 417
AflII CTTAAG 1 cut(s) 1093
AjnI CCWGG 5 cut(s) 552, 647, 1440, 1470, 1638
Alw21I GWGCWC 1 cut(s) 1077
Alw26I GTCTC 4 cut(s) 293, 624, 1552, 1612
AlwI GGATC 9 cut(s) 120, 1137, 1148, 1259, 1272, 1352, 1454, 1601, 1690
Ama87I CYCGRG 6 cut(s) 290, 403, 410, 1307, 1319, 1541
AoxI GGCC 4 cut(s) 3, 250, 420, 741
ApeKI GCWGC 5 cut(s) 460, 637, 872, 1289, 1655
ApoI RAATTY 1 cut(s) 1587
Asp700I GAANNNNTTC 1 cut(s) 794
AspLEI GCGC 2 cut(s) 233, 582
AspS9I GGNCC 7 cut(s) 207, 250, 368, 407, 420, 532, 1579
AsuC2I CCSGG 1 cut(s) 355
AsuHPI GGTGA 4 cut(s) 58, 718, 1018, 1696
AsuNHI GCTAGC 1 cut(s) 1520
AvaI CYCGRG 6 cut(s) 290, 403, 410, 1307, 1319, 1541
AvaII GGWCC 5 cut(s) 207, 368, 407, 532, 1579
BaeI ACNNNNGTAYC 2 cut(s) 1196, 1229
BamHI GGATCC 1 cut(s) 1264
BanI GGYRCC 3 cut(s) 230, 610, 1391
BanII GRGCYC 1 cut(s) 648
BbsI GAAGAC 1 cut(s) 188
Bbv12I GWGCWC 1 cut(s) 1077
BbvI GCAGC 5 cut(s) 472, 649, 884, 1276, 1642
BccI CCATC 5 cut(s) 92, 694, 961, 1006, 1478
BceAI ACGGC 4 cut(s) 47, 251, 1379, 1509
BcgI CGANNNNNNTGC 2 cut(s) 1005, 1039
BciT130I CCWGG 5 cut(s) 554, 649, 1442, 1472, 1640
BcnI CCSGG 1 cut(s) 355
BcoDI GTCTC 4 cut(s) 293, 624, 1552, 1612
BfaI CTAG 6 cut(s) 167, 507, 987, 1133, 1464, 1521
BfoI RGCGCY 1 cut(s) 234
BfrI CTTAAG 1 cut(s) 1093
BfuAI ACCTGC 1 cut(s) 1048
BglI GCCNNNNNGGC 2 cut(s) 228, 272
Bme1390I CCNGG 6 cut(s) 355, 554, 649, 1442, 1472, 1640
Bme18I GGWCC 5 cut(s) 207, 368, 407, 532, 1579
BmeT110I CYCGRG 6 cut(s) 290, 403, 410, 1307, 1319, 1541
BmgT120I GGNCC 7 cut(s) 207, 250, 368, 407, 420, 532, 1579
BmrFI CCNGG 6 cut(s) 355, 554, 649, 1442, 1472, 1640
BmsI GCATC 6 cut(s) 385, 474, 682, 1324, 1356, 1487
BmtI GCTAGC 1 cut(s) 1524
BpiI GAAGAC 1 cut(s) 188
Bpu10I CCTNAGC 3 cut(s) 642, 950, 1659
BpuEI CTTGAG 1 cut(s) 324
BpuMI CCSGG 1 cut(s) 355
BsaHI GRCGYC 3 cut(s) 174, 231, 264
BsaI GGTCTC 1 cut(s) 293
Bsc4I CCNNNNNNNGG 5 cut(s) 76, 360, 361, 391, 417
Bse118I RCCGGY 2 cut(s) 222, 344
Bse1I ACTGG 2 cut(s) 253, 1399
Bse3DI GCAATG 2 cut(s) 778, 1320
BseBI CCWGG 5 cut(s) 554, 649, 1442, 1472, 1640
BseGI GGATG 2 cut(s) 400, 607
BseLI CCNNNNNNNGG 5 cut(s) 76, 360, 361, 391, 417
BseMI GCAATG 2 cut(s) 778, 1320
BseMII CTCAG 4 cut(s) 633, 1104, 1261, 1673
BseNI ACTGG 2 cut(s) 253, 1399
BseRI GAGGAG 6 cut(s) 31, 620, 671, 728, 731, 917
BseXI GCAGC 5 cut(s) 472, 649, 884, 1276, 1642
BsgI GTGCAG 1 cut(s) 891
Bsh1236I CGCG 1 cut(s) 582
BshFI GGCC 4 cut(s) 5, 252, 422, 743
BshNI GGYRCC 3 cut(s) 230, 610, 1391
BsiHKAI GWGCWC 1 cut(s) 1077
BsiHKCI CYCGRG 6 cut(s) 290, 403, 410, 1307, 1319, 1541
BsiSI CCGG 9 cut(s) 45, 223, 345, 355, 614, 626, 668, 680, 692
BslFI GGGAC 2 cut(s) 393, 601
BslI CCNNNNNNNGG 5 cut(s) 76, 360, 361, 391, 417
BsmAI GTCTC 4 cut(s) 293, 624, 1552, 1612
BsmFI GGGAC 2 cut(s) 393, 601
BsmI GAATGC 1 cut(s) 1578
BsnI GGCC 4 cut(s) 5, 252, 422, 743
Bso31I GGTCTC 1 cut(s) 293
BsoBI CYCGRG 6 cut(s) 290, 403, 410, 1307, 1319, 1541
Bsp1286I GDGCHC 2 cut(s) 648, 1077
Bsp143I GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1459, 1606, 1695
BspANI GGCC 4 cut(s) 5, 252, 422, 743
BspCNI CTCAG 4 cut(s) 634, 1105, 1260, 1672
BspFNI CGCG 1 cut(s) 582
BspHI TCATGA 1 cut(s) 1407
BspMI ACCTGC 1 cut(s) 1048
BspOI GCTAGC 1 cut(s) 1524
BspPI GGATC 9 cut(s) 120, 1137, 1148, 1259, 1272, 1352, 1454, 1601, 1690
BspQI GCTCTTC 1 cut(s) 1167
BspT107I GGYRCC 3 cut(s) 230, 610, 1391
BspTI CTTAAG 1 cut(s) 1093
BspTNI GGTCTC 1 cut(s) 293
BsrBI CCGCTC 2 cut(s) 236, 631
BsrDI GCAATG 2 cut(s) 778, 1320
BsrFI RCCGGY 2 cut(s) 222, 344
BsrI ACTGG 2 cut(s) 253, 1399
BssAI RCCGGY 2 cut(s) 222, 344
BssMI GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1459, 1606, 1695
BssNI GRCGYC 3 cut(s) 174, 231, 264
BssT1I CCWWGG 4 cut(s) 822, 1002, 1260, 1650
Bst2UI CCWGG 5 cut(s) 554, 649, 1442, 1472, 1640
Bst4CI ACNGT 2 cut(s) 187, 920
Bst6I CTCTTC 3 cut(s) 728, 937, 1167
BstACI GRCGYC 3 cut(s) 174, 231, 264
BstAFI CTTAAG 1 cut(s) 1093
BstC8I GCNNGC 5 cut(s) 224, 549, 769, 1294, 1522
BstDEI CTNAG 5 cut(s) 642, 950, 1113, 1247, 1659
BstDSI CCRYGG 1 cut(s) 1525
BstF5I GGATG 2 cut(s) 400, 607
BstFNI CGCG 1 cut(s) 582
BstH2I RGCGCY 1 cut(s) 234
BstHHI GCGC 2 cut(s) 233, 582
BstKTI GATC 9 cut(s) 128, 297, 1132, 1156, 1267, 1360, 1462, 1609, 1698
BstMAI GTCTC 4 cut(s) 293, 624, 1552, 1612
BstMBI GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1459, 1606, 1695
BstMWI GCNNNNNNNGC 9 cut(s) 11, 137, 228, 249, 272, 637, 643, 773, 1118
BstNI CCWGG 5 cut(s) 554, 649, 1442, 1472, 1640
BstNSI RCATGY 1 cut(s) 1296
BstSCI CCNGG 6 cut(s) 353, 552, 647, 1440, 1470, 1638
BstUI CGCG 1 cut(s) 582
BstV1I GCAGC 5 cut(s) 472, 649, 884, 1276, 1642
BstV2I GAAGAC 1 cut(s) 188
BstX2I RGATCY 4 cut(s) 1129, 1264, 1606, 1695
BstYI RGATCY 4 cut(s) 1129, 1264, 1606, 1695
BsuRI GGCC 4 cut(s) 5, 252, 422, 743
BtgI CCRYGG 1 cut(s) 1525
BtsCI GGATG 2 cut(s) 400, 607
BtsI GCAGTG 2 cut(s) 238, 429
BtsIMutI CAGTG 4 cut(s) 238, 429, 1236, 1717
BveI ACCTGC 1 cut(s) 1048
Cac8I GCNNGC 5 cut(s) 224, 549, 769, 1294, 1522
CciI TCATGA 1 cut(s) 1407
CfoI GCGC 2 cut(s) 233, 582
Cfr10I RCCGGY 2 cut(s) 222, 344
Cfr13I GGNCC 7 cut(s) 207, 250, 368, 407, 420, 532, 1579
CseI GACGC 3 cut(s) 182, 272, 344
Csp6I GTAC 3 cut(s) 256, 1213, 1234
CviAII CATG 3 cut(s) 107, 1293, 1408
CviQI GTAC 3 cut(s) 256, 1213, 1234
DdeI CTNAG 5 cut(s) 642, 950, 1113, 1247, 1659
DinI GGCGCC 1 cut(s) 232
DpnI GATC 9 cut(s) 127, 296, 1131, 1155, 1266, 1359, 1461, 1608, 1697
DpnII GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1459, 1606, 1695
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 728, 937, 1167
EarI CTCTTC 3 cut(s) 728, 937, 1167
EciI GGCGGA 3 cut(s) 118, 611, 612
Eco130I CCWWGG 4 cut(s) 822, 1002, 1260, 1650
Eco24I GRGCYC 1 cut(s) 648
Eco31I GGTCTC 1 cut(s) 293
Eco47I GGWCC 5 cut(s) 207, 368, 407, 532, 1579
Eco57I CTGAAG 3 cut(s) 180, 338, 1260
Eco88I CYCGRG 6 cut(s) 290, 403, 410, 1307, 1319, 1541
EcoO109I RGGNCCY 2 cut(s) 407, 1579
EcoRII CCWGG 5 cut(s) 552, 647, 1440, 1470, 1638
EcoT14I CCWWGG 4 cut(s) 822, 1002, 1260, 1650
EcoT38I GRGCYC 1 cut(s) 648
EgeI GGCGCC 1 cut(s) 232
EheI GGCGCC 1 cut(s) 232
ErhI CCWWGG 4 cut(s) 822, 1002, 1260, 1650
FaeI CATG 3 cut(s) 110, 1296, 1411
FaqI GGGAC 2 cut(s) 393, 601
FatI CATG 3 cut(s) 106, 1292, 1407
FauI CCCGC 2 cut(s) 381, 1708
FblI GTMKAC 1 cut(s) 443
FokI GGATG 2 cut(s) 407, 614
FriOI GRGCYC 1 cut(s) 648
FspBI CTAG 6 cut(s) 167, 507, 987, 1133, 1464, 1521
GlaI GCGC 2 cut(s) 232, 581
HaeII RGCGCY 1 cut(s) 234
HaeIII GGCC 4 cut(s) 5, 252, 422, 743
HapII CCGG 9 cut(s) 45, 223, 345, 355, 614, 626, 668, 680, 692
HgaI GACGC 3 cut(s) 182, 272, 344
HhaI GCGC 2 cut(s) 233, 582
Hin1I GRCGYC 3 cut(s) 174, 231, 264
Hin1II CATG 3 cut(s) 110, 1296, 1411
Hin6I GCGC 2 cut(s) 231, 580
HinP1I GCGC 2 cut(s) 231, 580
HincII GTYRAC 2 cut(s) 444, 1629
HindII GTYRAC 2 cut(s) 444, 1629
HindIII AAGCTT 2 cut(s) 978, 1425
HinfI GANTC 7 cut(s) 493, 617, 808, 865, 1049, 1537, 1645
HpaI GTTAAC 1 cut(s) 1629
HpaII CCGG 9 cut(s) 45, 223, 345, 355, 614, 626, 668, 680, 692
HphI GGTGA 4 cut(s) 58, 718, 1018, 1696
Hpy166II GTNNAC 3 cut(s) 444, 1236, 1629
Hpy188I TCNGA 5 cut(s) 160, 318, 498, 958, 1250
Hpy8I GTNNAC 3 cut(s) 444, 1236, 1629
Hpy99I CGWCG 8 cut(s) 11, 176, 191, 263, 266, 338, 445, 880
HpyCH4III ACNGT 2 cut(s) 187, 920
HpyCH4IV ACGT 2 cut(s) 570, 878
HpyCH4V TGCA 8 cut(s) 460, 487, 547, 872, 1292, 1337, 1347, 1576
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 137, 228, 249, 272, 637, 643, 773, 1118
HpyF3I CTNAG 5 cut(s) 642, 950, 1113, 1247, 1659
HpySE526I ACGT 2 cut(s) 570, 878
Hsp92I GRCGYC 3 cut(s) 174, 231, 264
Hsp92II CATG 3 cut(s) 110, 1296, 1411
HspAI GCGC 2 cut(s) 231, 580
KasI GGCGCC 1 cut(s) 230
KflI GGGWCCC 1 cut(s) 407
KroI GCCGGC 1 cut(s) 222
KroNI GCCGGC 1 cut(s) 224
KspAI GTTAAC 1 cut(s) 1629
Kzo9I GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1459, 1606, 1695
LguI GCTCTTC 1 cut(s) 1167
LmnI GCTCC 5 cut(s) 100, 628, 670, 682, 694
Lsp1109I GCAGC 5 cut(s) 472, 649, 884, 1276, 1642
LweI GCATC 6 cut(s) 385, 474, 682, 1324, 1356, 1487
MaeI CTAG 6 cut(s) 167, 507, 987, 1133, 1464, 1521
MaeII ACGT 2 cut(s) 570, 878
MaeIII GTNAC 3 cut(s) 64, 215, 357
MalI GATC 9 cut(s) 127, 296, 1131, 1155, 1266, 1359, 1461, 1608, 1697
MbiI CCGCTC 2 cut(s) 236, 631
MboI GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1459, 1606, 1695
MflI RGATCY 4 cut(s) 1129, 1264, 1606, 1695
MhlI GDGCHC 2 cut(s) 648, 1077
MluCI AATT 7 cut(s) 517, 1100, 1475, 1509, 1547, 1587, 1719
Mly113I GGCGCC 1 cut(s) 231
MlyI GAGTC 3 cut(s) 626, 1058, 1531
MmeI TCCRAC 3 cut(s) 126, 144, 1385
MroNI GCCGGC 1 cut(s) 222
MroXI GAANNNNTTC 1 cut(s) 794
MseI TTAA 8 cut(s) 195, 567, 912, 963, 1094, 1227, 1512, 1628
MspCI CTTAAG 1 cut(s) 1093
MspI CCGG 9 cut(s) 45, 223, 345, 355, 614, 626, 668, 680, 692
MspR9I CCNGG 6 cut(s) 355, 554, 649, 1442, 1472, 1640
Mva1269I GAATGC 1 cut(s) 1578
MvaI CCWGG 5 cut(s) 554, 649, 1442, 1472, 1640
MvnI CGCG 1 cut(s) 582
MwoI GCNNNNNNNGC 9 cut(s) 11, 137, 228, 249, 272, 637, 643, 773, 1118
NaeI GCCGGC 1 cut(s) 224
NarI GGCGCC 1 cut(s) 231
NciI CCSGG 1 cut(s) 355
NdeII GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1459, 1606, 1695
NgoMIV GCCGGC 1 cut(s) 222
NheI GCTAGC 1 cut(s) 1520
NlaIII CATG 3 cut(s) 110, 1296, 1411
NmeAIII GCCGAG 2 cut(s) 207, 769
NmuCI GTSAC 2 cut(s) 64, 357
NspI RCATGY 1 cut(s) 1296
PaeI GCATGC 1 cut(s) 1296
PaeR7I CTCGAG 1 cut(s) 290
PagI TCATGA 1 cut(s) 1407
PasI CCCWGGG 1 cut(s) 553
PciSI GCTCTTC 1 cut(s) 1167
PcsI WCGNNNNNNNCGW 1 cut(s) 264
PctI GAATGC 1 cut(s) 1578
PdiI GCCGGC 1 cut(s) 224
PdmI GAANNNNTTC 1 cut(s) 794
PfeI GAWTC 4 cut(s) 493, 808, 865, 1645
PflFI GACNNNGTC 1 cut(s) 355
PfoI TCCNGGA 1 cut(s) 1638
PleI GAGTC 3 cut(s) 625, 1057, 1531
PluTI GGCGCC 1 cut(s) 234
PpsI GAGTC 3 cut(s) 625, 1057, 1531
PpuMI RGGWCCY 2 cut(s) 407, 1579
PsiI TTATAA 1 cut(s) 783
Psp5II RGGWCCY 2 cut(s) 407, 1579
Psp6I CCWGG 5 cut(s) 552, 647, 1440, 1470, 1638
PspGI CCWGG 5 cut(s) 552, 647, 1440, 1470, 1638
PspPI GGNCC 7 cut(s) 207, 250, 368, 407, 420, 532, 1579
PspPPI RGGWCCY 2 cut(s) 407, 1579
PsuI RGATCY 4 cut(s) 1129, 1264, 1606, 1695
PsyI GACNNNGTC 1 cut(s) 355
RsaI GTAC 3 cut(s) 257, 1214, 1235
RsaNI GTAC 3 cut(s) 256, 1213, 1234
SalI GTCGAC 1 cut(s) 442
SapI GCTCTTC 1 cut(s) 1167
SaqAI TTAA 8 cut(s) 195, 567, 912, 963, 1094, 1227, 1512, 1628
Sau3AI GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1459, 1606, 1695
Sau96I GGNCC 7 cut(s) 207, 250, 368, 407, 420, 532, 1579
SchI GAGTC 3 cut(s) 626, 1058, 1531
ScrFI CCNGG 6 cut(s) 355, 554, 649, 1442, 1472, 1640
SduI GDGCHC 2 cut(s) 648, 1077
SfaNI GCATC 6 cut(s) 385, 474, 682, 1324, 1356, 1487
SfoI GGCGCC 1 cut(s) 232
Sfr274I CTCGAG 1 cut(s) 290
SinI GGWCC 5 cut(s) 207, 368, 407, 532, 1579
SlaI CTCGAG 1 cut(s) 290
SmlI CTYRAG 3 cut(s) 290, 339, 1093
SmoI CTYRAG 3 cut(s) 290, 339, 1093
SphI GCATGC 1 cut(s) 1296
Sse9I AATT 7 cut(s) 517, 1100, 1475, 1509, 1547, 1587, 1719
SspDI GGCGCC 1 cut(s) 230
SspI AATATT 2 cut(s) 1196, 1597
SspMI CTAG 6 cut(s) 167, 507, 987, 1133, 1464, 1521
StyD4I CCNGG 6 cut(s) 353, 552, 647, 1440, 1470, 1638
StyI CCWWGG 4 cut(s) 822, 1002, 1260, 1650
TaaI ACNGT 2 cut(s) 187, 920
TaiI ACGT 2 cut(s) 573, 881
TaqI TCGA 8 cut(s) 87, 189, 291, 297, 443, 798, 1025, 1350
TasI AATT 7 cut(s) 517, 1100, 1475, 1509, 1547, 1587, 1719
TatI WGTACW 1 cut(s) 1233
TauI GCSGC 5 cut(s) 35, 62, 134, 236, 779
TfiI GAWTC 4 cut(s) 493, 808, 865, 1645
Tru1I TTAA 8 cut(s) 195, 567, 912, 963, 1094, 1227, 1512, 1628
Tru9I TTAA 8 cut(s) 195, 567, 912, 963, 1094, 1227, 1512, 1628
TscAI CASTG 4 cut(s) 245, 436, 1243, 1717
TseFI GTSAC 2 cut(s) 64, 357
TseI GCWGC 5 cut(s) 460, 637, 872, 1289, 1655
Tsp45I GTSAC 2 cut(s) 64, 357
TspDTI ATGAA 6 cut(s) 395, 843, 1185, 1206, 1396, 1424
TspGWI ACGGA 1 cut(s) 92
TspRI CASTG 4 cut(s) 245, 436, 1243, 1717
Tth111I GACNNNGTC 1 cut(s) 355
Vha464I CTTAAG 1 cut(s) 1093
VpaK11BI GGWCC 5 cut(s) 207, 368, 407, 532, 1579
XapI RAATTY 1 cut(s) 1587
XbaI TCTAGA 1 cut(s) 1132
XceI RCATGY 1 cut(s) 1296
XhoI CTCGAG 1 cut(s) 290
XmiI GTMKAC 1 cut(s) 443
XmnI GAANNNNTTC 1 cut(s) 794
XspI CTAG 6 cut(s) 167, 507, 987, 1133, 1464, 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.