RchiOBHm_Chr7g0202131
HSP70 Family

hsp70-Hsp90 organizing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0011330
Physical Location & Seq
Reverse (-)
19780963 .. 19784345
3383 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18095

Sequence Viewer

Length: 1734 bp
ATGGCCGACGAAGCCAAAGCCAAGGGCAACGCCGCCTACTCGGCCGGCGACTACACCGCCGCCATTACCCACTTCACTGAAGCCATCAACCTCGCTCCCACCAACCACGTCCTCTACTCCAACCGATCCGCCTCCTACGCCAGCCTCCACAAATACTCCGACGCCCTCTCCGACGCCAAGAAGACCGTCGAGCTGAAGCCCGACTGGGTCAAAGGCTACAGCCGCCTCGGCTCCGCCCACCACGGCCTCGGCCACTTCGACGACGCCGTTTCCGCTTACAAGAAGGGCCTCGAGATTGATCCCAACAACGCCGCCCTTAAAGAGGGCTTGGCCGAGAGTCAGTCCGCCGCCGCCCGCGCCGCCCGGGCACGAGCCCCGCCGCCGACGAACCTATTCGGCGACGCGTTCTCGGGTCCTCAGATGTGGGCCAAGCTCACCGCCGACCCGAGTACCCGGGCCTTTATGCAGCAGCCGGATTTCGTGAACATGATGCAGGAGATTCAGAAAAACCCTAGCAATCTCAATCTTTATTTGAAGGACCAGAGGGTTATGCAAGCCCTAGGGGTTTTGCTCAATGTGAAGCTCCAGGGAGGCGCGTCGGAGGACGACGATATGCCGGATTTTCCGTCGGAGAGGACGCGGTCTGCGGAGGCCGCTGCTGAGCCGCAGAAGAAGGAGGAGAAGAAGCCGGAGCCGATGGAAGTGCGGGAGGAGGAGAAGGAGGCCAGGAAGAGGAAAGCTGAGGCTTTAAAGGAGAAGGAGGCTGGCAATGCGGCTTATAAGAAGAAGGATTTCGACACGGCTATTCAGCACTATACCAAGGCAATGGAGATAGATGATGAAGATATTTCGTACTTGTTGAATCGTGCTGCGACTTACTTGGAAATGGGTCAGTATGATGAATGCATTGAAGACTGTGACAAGGCTGTAGAAAAGGGAAGAGAGGTGAGGGCGGACTTTAAGATGATAGCAAAAGCTTTGACTAGGAAGGGAACTGCCATTGTGAAAACAGCAAAAACCTCAAAAGACTATGAGCCTGCTATTGAGATATTCCAGAAAGCTCTCACAGAGCATCGCAACCCTGACACCCTAAAGAAATTGAATGATGCTGAGAAAGCTAAGAAGGACCTAGAGCAACAAGAGTATTTTGATCCAAAGCTAGCAGATGAGGAGCGAGAGAAAGGCAATGAATTCTTCAAGCAGCAGAAGTACCCAGAGGCTATTGGGCATTACACTGAATCTTTGAGAAGGAATCCAAAGGATCCAAAGGCATATAGCAATAGAGCTGCTTGCTATACAAAGTTGGGGGCAATGCCGGAGGGATTGAAGGATGCTGAGAAGTGCATTGAGCTTGACCCAACCTTTTCAAAGGGTTATACCAGAAAAGGTGCGGTCCAGTTTTTCATGAGAGAGTATGACAAAGCTTTGGAAACGTATCAAGAAGGTCTGAAGCATGATCCTGGCAACCAGGACTTGCTTGATGGTGTGAGGAGATGTGTAGAGCAGATCAACAAAGCTAGCCGTGGGGATCTGAGTGCCGATGAATTGAAGGAGAGACAGGCTAAGGGAATGCAAGACCCAGAAATTCAGAATATCCTTTCAGATCCTGTTATGAGACAGGTGTTGGTTGATTTCCAGGAAAATCCCAAAGCTGCTCAGGAACACTCAAAGAACCCGATGGTGATGGCCAAAATCCAGAAGCTAGTGAGTGCTGGAATTGTCCAGATTAAGTGA

Protein Analysis

577

Amino Acids

64.73

Weight (kDa)

6.12

Isoelectric Point (pI)

34.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_BSK1_C PF25575 4 - 70 9.4e-07 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_1 PF00515 71 - 103 2.7e-07 Tetratricopeptide repeat
TPR_2 PF07719 71 - 103 3.8e-06 Tetratricopeptide repeat
STI1-HOP_DP PF17830 139 - 191 2.8e-22 STI1/HOP, DP domain
TPR_BSK1_C PF25575 245 - 315 3.3e-08 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_11 PF13414 256 - 297 1.7e-06 TPR repeat
TPR_1 PF00515 286 - 311 3.8e-06 Tetratricopeptide repeat
TPR_12 PF13424 286 - 355 3e-06 Tetratricopeptide repeat
TPR_11 PF13414 395 - 436 7e-08 TPR repeat
TPR_1 PF00515 422 - 455 1.2e-06 Tetratricopeptide repeat
TPR_1 PF00515 457 - 489 4.1e-06 Tetratricopeptide repeat
STI1-HOP_DP PF17830 518 - 569 1.6e-15 STI1/HOP, DP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011330)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62740 AT4G12400 AT4G12400
fragaria_vesca FvH4_5g00400 FvH4_5g00400 FvH4_5g00400
malus_domestica MD04G1081900.v1.1 MD06G1065400.v1.1
prunus_persica Prupe.5G076500_v2.0.a1
pyrus_communis pycom04g07380 pycom06g05640
rosa_chinensis RchiOBHm_Chr7g0202131
rosa_laevigata RLG00000003623
rosa_multiflora Rmu_ssc0000228.1_g000003
rosa_roxburghii Rroxscaffold_3G00254830
rosa_rugosa Rorug07G0068200 Rorug07G0068300
rosa_samantha Rh7AG195700 Rh7CG206800
rosa_wichuraiana Rw7G017140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 780
AccII CGCG 4 cut(s) 357, 404, 596, 640
AclWI GGATC 8 cut(s) 120, 293, 1145, 1256, 1269, 1451, 1536, 1598
AcoI YGGCCR 5 cut(s) 3, 42, 250, 330, 1686
AcsI RAATTY 2 cut(s) 1190, 1584
AcuI CTGAAG 3 cut(s) 99, 215, 1469
AcyI GRCGYC 3 cut(s) 162, 174, 264
AfaI GTAC 3 cut(s) 451, 854, 1211
AfiI CCNNNNNNNGG 2 cut(s) 322, 732
AflIII ACRYGT 1 cut(s) 402
AgsI TTSAA 8 cut(s) 535, 862, 911, 1102, 1198, 1327, 1368, 1549
AjiI CACGTC 1 cut(s) 109
AjnI CCWGG 5 cut(s) 585, 725, 1459, 1467, 1635
Alw26I GTCTC 2 cut(s) 1549, 1609
AlwI GGATC 8 cut(s) 120, 293, 1145, 1256, 1269, 1451, 1536, 1598
AlwNI CAGNNNCTG 1 cut(s) 1607
Ama87I CYCGRG 5 cut(s) 290, 363, 409, 445, 453
ApeKI GCWGC 7 cut(s) 466, 469, 656, 869, 1201, 1286, 1652
ApoI RAATTY 2 cut(s) 1190, 1584
Asp700I GAANNNNTTC 2 cut(s) 392, 791
AspA2I CCTAGG 1 cut(s) 559
AspLEI GCGC 2 cut(s) 359, 596
AspS9I GGNCC 7 cut(s) 286, 413, 426, 456, 538, 1126, 1393
AsuC2I CCSGG 4 cut(s) 364, 365, 454, 455
AsuHPI GGTGA 3 cut(s) 427, 958, 1693
AsuNHI GCTAGC 2 cut(s) 1159, 1517
AvaI CYCGRG 5 cut(s) 290, 363, 409, 445, 453
AvaII GGWCC 4 cut(s) 413, 538, 1126, 1393
AvrII CCTAGG 1 cut(s) 559
BaeGI GKGCMC 1 cut(s) 370
BaeI ACNNNNGTAYC 2 cut(s) 433, 466
BalI TGGCCA 1 cut(s) 1688
BamHI GGATCC 1 cut(s) 1261
BanII GRGCYC 1 cut(s) 376
BauI CACGAG 1 cut(s) 369
BbsI GAAGAC 2 cut(s) 188, 918
BbvCI CCTCAGC 1 cut(s) 741
BbvI GCAGC 7 cut(s) 478, 481, 643, 856, 1213, 1273, 1639
BccI CCATC 5 cut(s) 92, 691, 1475, 1672, 1678
BceAI ACGGC 4 cut(s) 251, 259, 816, 1506
BcgI CGANNNNNNTGC 2 cut(s) 685, 719
BciT130I CCWGG 5 cut(s) 587, 727, 1461, 1469, 1637
BcnI CCSGG 4 cut(s) 364, 365, 454, 455
BcoDI GTCTC 2 cut(s) 1549, 1609
BfaI CTAG 7 cut(s) 513, 560, 984, 1130, 1160, 1518, 1703
BfmI CTRYAG 2 cut(s) 217, 927
BglI GCCNNNNNGGC 3 cut(s) 41, 228, 365
BlnI CCTAGG 1 cut(s) 559
BlpI GCTNAGC 1 cut(s) 660
Bme1390I CCNGG 9 cut(s) 364, 365, 454, 455, 587, 727, 1461, 1469, 1637
Bme18I GGWCC 4 cut(s) 413, 538, 1126, 1393
BmeT110I CYCGRG 5 cut(s) 290, 363, 409, 445, 453
BmgBI CACGTC 1 cut(s) 109
BmgT120I GGNCC 7 cut(s) 286, 413, 426, 456, 538, 1126, 1393
BmiI GGNNCC 4 cut(s) 232, 414, 693, 1263
BmrFI CCNGG 9 cut(s) 364, 365, 454, 455, 587, 727, 1461, 1469, 1637
BmrI ACTGGG 1 cut(s) 214
BmsI GCATC 4 cut(s) 480, 1081, 1096, 1321
BmtI GCTAGC 2 cut(s) 1163, 1521
BmuI ACTGGG 1 cut(s) 214
BpiI GAAGAC 2 cut(s) 188, 918
BpmI CTGGAG 1 cut(s) 569
Bpu10I CCTNAGC 3 cut(s) 741, 1563, 1656
Bpu1102I GCTNAGC 1 cut(s) 660
BpuMI CCSGG 4 cut(s) 364, 365, 454, 455
BsaHI GRCGYC 3 cut(s) 162, 174, 264
BsaXI ACNNNNNCTCC 4 cut(s) 140, 152, 170, 182
Bsc4I CCNNNNNNNGG 2 cut(s) 322, 732
Bse118I RCCGGY 1 cut(s) 44
Bse1I ACTGG 2 cut(s) 209, 1396
Bse3DI GCAATG 4 cut(s) 775, 831, 1192, 1317
BseBI CCWGG 5 cut(s) 587, 727, 1461, 1469, 1637
BseGI GGATG 1 cut(s) 1336
BseLI CCNNNNNNNGG 2 cut(s) 322, 732
BseMI GCAATG 4 cut(s) 775, 831, 1192, 1317
BseMII CTCAG 7 cut(s) 431, 651, 732, 1101, 1326, 1523, 1670
BseNI ACTGG 2 cut(s) 209, 1396
BseRI GAGGAG 5 cut(s) 692, 725, 728, 1184, 1504
BseSI GKGCMC 1 cut(s) 370
BseX3I CGGCCG 1 cut(s) 42
BseXI GCAGC 7 cut(s) 478, 481, 643, 856, 1213, 1273, 1639
Bsh1236I CGCG 4 cut(s) 357, 404, 596, 640
Bsh1285I CGRYCG 1 cut(s) 45
BsiEI CGRYCG 1 cut(s) 45
BsiHKCI CYCGRG 5 cut(s) 290, 363, 409, 445, 453
BsiSI CCGG 7 cut(s) 45, 364, 454, 473, 617, 689, 1316
BslI CCNNNNNNNGG 2 cut(s) 322, 732
BsmAI GTCTC 2 cut(s) 1549, 1609
BsmI GAATGC 2 cut(s) 908, 1575
BsoBI CYCGRG 5 cut(s) 290, 363, 409, 445, 453
Bsp1286I GDGCHC 2 cut(s) 370, 376
Bsp143I GATC 8 cut(s) 125, 298, 1150, 1261, 1456, 1506, 1528, 1603
Bsp1720I GCTNAGC 1 cut(s) 660
BspCNI CTCAG 7 cut(s) 430, 652, 733, 1102, 1327, 1524, 1669
BspFNI CGCG 4 cut(s) 357, 404, 596, 640
BspHI TCATGA 1 cut(s) 1404
BspLI GGNNCC 4 cut(s) 232, 414, 693, 1263
BspOI GCTAGC 2 cut(s) 1163, 1521
BspPI GGATC 8 cut(s) 120, 293, 1145, 1256, 1269, 1451, 1536, 1598
BsrDI GCAATG 4 cut(s) 775, 831, 1192, 1317
BsrFI RCCGGY 1 cut(s) 44
BsrI ACTGG 2 cut(s) 209, 1396
BssAI RCCGGY 1 cut(s) 44
BssMI GATC 8 cut(s) 125, 298, 1150, 1261, 1456, 1506, 1528, 1603
BssNI GRCGYC 3 cut(s) 162, 174, 264
BssSI CACGAG 1 cut(s) 369
BssT1I CCWWGG 3 cut(s) 21, 559, 819
Bst2BI CACGAG 1 cut(s) 369
Bst2UI CCWGG 5 cut(s) 587, 727, 1461, 1469, 1637
Bst4CI ACNGT 2 cut(s) 187, 917
Bst6I CTCTTC 2 cut(s) 725, 934
BstACI GRCGYC 3 cut(s) 162, 174, 264
BstC8I GCNNGC 9 cut(s) 46, 142, 355, 555, 766, 1038, 1161, 1291, 1519
BstDEI CTNAG 9 cut(s) 417, 660, 741, 1110, 1119, 1335, 1532, 1563, 1656
BstDSI CCRYGG 2 cut(s) 241, 1522
BstENI CCTNNNNNAGG 1 cut(s) 320
BstF5I GGATG 1 cut(s) 1336
BstFNI CGCG 4 cut(s) 357, 404, 596, 640
BstHHI GCGC 2 cut(s) 359, 596
BstKTI GATC 8 cut(s) 128, 301, 1153, 1264, 1459, 1509, 1531, 1606
BstMAI GTCTC 2 cut(s) 1549, 1609
BstMBI GATC 8 cut(s) 125, 298, 1150, 1261, 1456, 1506, 1528, 1603
BstMCI CGRYCG 1 cut(s) 45
BstNI CCWGG 5 cut(s) 587, 727, 1461, 1469, 1637
BstSCI CCNGG 9 cut(s) 362, 363, 452, 453, 585, 725, 1459, 1467, 1635
BstSFI CTRYAG 2 cut(s) 217, 927
BstSLI GKGCMC 1 cut(s) 370
BstUI CGCG 4 cut(s) 357, 404, 596, 640
BstV1I GCAGC 7 cut(s) 478, 481, 643, 856, 1213, 1273, 1639
BstV2I GAAGAC 2 cut(s) 188, 918
BstX2I RGATCY 3 cut(s) 1261, 1528, 1603
BstXI CCANNNNNNTGG 1 cut(s) 826
BstYI RGATCY 3 cut(s) 1261, 1528, 1603
BstZI CGGCCG 1 cut(s) 42
BtgI CCRYGG 2 cut(s) 241, 1522
BtgZI GCGATG 1 cut(s) 1058
BtrI CACGTC 1 cut(s) 109
BtsCI GGATG 1 cut(s) 1336
BtsIMutI CAGTG 2 cut(s) 75, 1233
Cac8I GCNNGC 9 cut(s) 46, 142, 355, 555, 766, 1038, 1161, 1291, 1519
CaiI CAGNNNCTG 1 cut(s) 1607
CciI TCATGA 1 cut(s) 1404
CfoI GCGC 2 cut(s) 359, 596
Cfr10I RCCGGY 1 cut(s) 44
Cfr13I GGNCC 7 cut(s) 286, 413, 426, 456, 538, 1126, 1393
Cfr9I CCCGGG 2 cut(s) 363, 453
CseI GACGC 6 cut(s) 170, 182, 272, 410, 585, 646
Csp6I GTAC 3 cut(s) 450, 853, 1210
CviAII CATG 3 cut(s) 487, 1405, 1454
CviQI GTAC 3 cut(s) 450, 853, 1210
DdeI CTNAG 9 cut(s) 417, 660, 741, 1110, 1119, 1335, 1532, 1563, 1656
DpnI GATC 8 cut(s) 127, 300, 1152, 1263, 1458, 1508, 1530, 1605
DpnII GATC 8 cut(s) 125, 298, 1150, 1261, 1456, 1506, 1528, 1603
DraI TTTAAA 1 cut(s) 750
EaeI YGGCCR 5 cut(s) 3, 42, 250, 330, 1686
EagI CGGCCG 1 cut(s) 42
Eam1104I CTCTTC 2 cut(s) 725, 934
EarI CTCTTC 2 cut(s) 725, 934
EciI GGCGGA 4 cut(s) 118, 223, 334, 968
EclXI CGGCCG 1 cut(s) 42
Eco130I CCWWGG 3 cut(s) 21, 559, 819
Eco24I GRGCYC 1 cut(s) 376
Eco47I GGWCC 4 cut(s) 413, 538, 1126, 1393
Eco52I CGGCCG 1 cut(s) 42
Eco57I CTGAAG 3 cut(s) 99, 215, 1469
Eco88I CYCGRG 5 cut(s) 290, 363, 409, 445, 453
EcoNI CCTNNNNNAGG 1 cut(s) 320
EcoO109I RGGNCCY 3 cut(s) 286, 413, 1126
EcoRI GAATTC 1 cut(s) 1190
EcoRII CCWGG 5 cut(s) 585, 725, 1459, 1467, 1635
EcoT14I CCWWGG 3 cut(s) 21, 559, 819
EcoT22I ATGCAT 1 cut(s) 908
EcoT38I GRGCYC 1 cut(s) 376
ErhI CCWWGG 3 cut(s) 21, 559, 819
FaeI CATG 3 cut(s) 490, 1408, 1457
FatI CATG 3 cut(s) 486, 1404, 1453
FauI CCCGC 3 cut(s) 362, 384, 699
FokI GGATG 1 cut(s) 1343
FriOI GRGCYC 1 cut(s) 376
FspBI CTAG 7 cut(s) 513, 560, 984, 1130, 1160, 1518, 1703
GlaI GCGC 2 cut(s) 358, 595
GsuI CTGGAG 1 cut(s) 569
HapII CCGG 7 cut(s) 45, 364, 454, 473, 617, 689, 1316
HgaI GACGC 6 cut(s) 170, 182, 272, 410, 585, 646
HhaI GCGC 2 cut(s) 359, 596
Hin1I GRCGYC 3 cut(s) 162, 174, 264
Hin1II CATG 3 cut(s) 490, 1408, 1457
Hin6I GCGC 2 cut(s) 357, 594
HinP1I GCGC 2 cut(s) 357, 594
HindIII AAGCTT 2 cut(s) 975, 1422
HinfI GANTC 5 cut(s) 337, 499, 862, 1238, 1252
HpaII CCGG 7 cut(s) 45, 364, 454, 473, 617, 689, 1316
HphI GGTGA 3 cut(s) 427, 958, 1693
Hpy166II GTNNAC 1 cut(s) 484
Hpy188III TCNNGA 8 cut(s) 292, 481, 1054, 1405, 1439, 1658, 1696, 1723
Hpy8I GTNNAC 1 cut(s) 484
HpyCH4III ACNGT 2 cut(s) 187, 917
HpyCH4IV ACGT 2 cut(s) 108, 1433
HpyCH4V TGCA 6 cut(s) 466, 493, 553, 906, 1344, 1573
HpyF3I CTNAG 9 cut(s) 417, 660, 741, 1110, 1119, 1335, 1532, 1563, 1656
HpySE526I ACGT 2 cut(s) 108, 1433
Hsp92I GRCGYC 3 cut(s) 162, 174, 264
Hsp92II CATG 3 cut(s) 490, 1408, 1457
HspAI GCGC 2 cut(s) 357, 594
KroI GCCGGC 1 cut(s) 44
KroNI GCCGGC 1 cut(s) 46
Kzo9I GATC 8 cut(s) 125, 298, 1150, 1261, 1456, 1506, 1528, 1603
LmnI GCTCC 5 cut(s) 100, 236, 588, 691, 1171
Lsp1109I GCAGC 7 cut(s) 478, 481, 643, 856, 1213, 1273, 1639
LweI GCATC 4 cut(s) 480, 1081, 1096, 1321
MaeI CTAG 7 cut(s) 513, 560, 984, 1130, 1160, 1518, 1703
MaeII ACGT 2 cut(s) 108, 1433
MaeIII GTNAC 1 cut(s) 917
MalI GATC 8 cut(s) 127, 300, 1152, 1263, 1458, 1508, 1530, 1605
MboI GATC 8 cut(s) 125, 298, 1150, 1261, 1456, 1506, 1528, 1603
MboII GAAGA 9 cut(s) 193, 682, 694, 742, 796, 854, 923, 951, 1186
MflI RGATCY 3 cut(s) 1261, 1528, 1603
MhlI GDGCHC 2 cut(s) 370, 376
MlsI TGGCCA 1 cut(s) 1688
MluCI AATT 5 cut(s) 1097, 1190, 1544, 1584, 1716
MluI ACGCGT 1 cut(s) 402
MluNI TGGCCA 1 cut(s) 1688
MlyI GAGTC 1 cut(s) 346
MmeI TCCRAC 5 cut(s) 144, 183, 195, 579, 609
Mox20I TGGCCA 1 cut(s) 1688
Mph1103I ATGCAT 1 cut(s) 908
MroNI GCCGGC 1 cut(s) 44
MroXI GAANNNNTTC 2 cut(s) 392, 791
MscI TGGCCA 1 cut(s) 1688
MseI TTAA 4 cut(s) 318, 749, 960, 1728
Msp20I TGGCCA 1 cut(s) 1688
MspA1I CMGCKG 1 cut(s) 656
MspI CCGG 7 cut(s) 45, 364, 454, 473, 617, 689, 1316
MspR9I CCNGG 9 cut(s) 364, 365, 454, 455, 587, 727, 1461, 1469, 1637
Mva1269I GAATGC 2 cut(s) 908, 1575
MvaI CCWGG 5 cut(s) 587, 727, 1461, 1469, 1637
MvnI CGCG 4 cut(s) 357, 404, 596, 640
NaeI GCCGGC 1 cut(s) 46
NciI CCSGG 4 cut(s) 364, 365, 454, 455
NdeII GATC 8 cut(s) 125, 298, 1150, 1261, 1456, 1506, 1528, 1603
NgoMIV GCCGGC 1 cut(s) 44
NheI GCTAGC 2 cut(s) 1159, 1517
NlaIII CATG 3 cut(s) 490, 1408, 1457
NlaIV GGNNCC 4 cut(s) 232, 414, 693, 1263
NmeAIII GCCGAG 4 cut(s) 20, 207, 228, 358
NmuCI GTSAC 1 cut(s) 917
NsiI ATGCAT 1 cut(s) 908
PaeR7I CTCGAG 1 cut(s) 290
PagI TCATGA 1 cut(s) 1404
PcsI WCGNNNNNNNCGW 3 cut(s) 168, 255, 264
PctI GAATGC 2 cut(s) 908, 1575
PdiI GCCGGC 1 cut(s) 46
PdmI GAANNNNTTC 2 cut(s) 392, 791
PfeI GAWTC 4 cut(s) 499, 862, 1238, 1252
PflFI GACNNNGTC 2 cut(s) 206, 640
PfoI TCCNGGA 1 cut(s) 1635
PleI GAGTC 1 cut(s) 345
PpsI GAGTC 1 cut(s) 345
PpuMI RGGWCCY 2 cut(s) 413, 1126
PsiI TTATAA 1 cut(s) 780
Psp5II RGGWCCY 2 cut(s) 413, 1126
Psp6I CCWGG 5 cut(s) 585, 725, 1459, 1467, 1635
PspGI CCWGG 5 cut(s) 585, 725, 1459, 1467, 1635
PspN4I GGNNCC 4 cut(s) 232, 414, 693, 1263
PspPI GGNCC 7 cut(s) 286, 413, 426, 456, 538, 1126, 1393
PspPPI RGGWCCY 2 cut(s) 413, 1126
PstNI CAGNNNCTG 1 cut(s) 1607
PsuI RGATCY 3 cut(s) 1261, 1528, 1603
PsyI GACNNNGTC 2 cut(s) 206, 640
RsaI GTAC 3 cut(s) 451, 854, 1211
RsaNI GTAC 3 cut(s) 450, 853, 1210
SaqAI TTAA 4 cut(s) 318, 749, 960, 1728
Sau3AI GATC 8 cut(s) 125, 298, 1150, 1261, 1456, 1506, 1528, 1603
Sau96I GGNCC 7 cut(s) 286, 413, 426, 456, 538, 1126, 1393
SchI GAGTC 1 cut(s) 346
ScrFI CCNGG 9 cut(s) 364, 365, 454, 455, 587, 727, 1461, 1469, 1637
SduI GDGCHC 2 cut(s) 370, 376
SfaNI GCATC 4 cut(s) 480, 1081, 1096, 1321
SfcI CTRYAG 2 cut(s) 217, 927
Sfr274I CTCGAG 1 cut(s) 290
SinI GGWCC 4 cut(s) 413, 538, 1126, 1393
SlaI CTCGAG 1 cut(s) 290
SmaI CCCGGG 2 cut(s) 365, 455
SmlI CTYRAG 1 cut(s) 290
SmoI CTYRAG 1 cut(s) 290
SrfI GCCCGGGC 1 cut(s) 365
Sse9I AATT 5 cut(s) 1097, 1190, 1544, 1584, 1716
SspMI CTAG 7 cut(s) 513, 560, 984, 1130, 1160, 1518, 1703
StyD4I CCNGG 9 cut(s) 362, 363, 452, 453, 585, 725, 1459, 1467, 1635
StyI CCWWGG 3 cut(s) 21, 559, 819
TaaI ACNGT 2 cut(s) 187, 917
TaiI ACGT 2 cut(s) 111, 1436
TaqI TCGA 4 cut(s) 189, 258, 291, 795
TasI AATT 5 cut(s) 1097, 1190, 1544, 1584, 1716
TfiI GAWTC 4 cut(s) 499, 862, 1238, 1252
Tru1I TTAA 4 cut(s) 318, 749, 960, 1728
Tru9I TTAA 4 cut(s) 318, 749, 960, 1728
TscAI CASTG 2 cut(s) 82, 1240
TseFI GTSAC 1 cut(s) 917
TseI GCWGC 7 cut(s) 466, 469, 656, 869, 1201, 1286, 1652
Tsp45I GTSAC 1 cut(s) 917
TspDTI ATGAA 5 cut(s) 855, 915, 1203, 1393, 1557
TspGWI ACGGA 1 cut(s) 615
TspMI CCCGGG 2 cut(s) 363, 453
TspRI CASTG 2 cut(s) 82, 1240
Tth111I GACNNNGTC 2 cut(s) 206, 640
VpaK11BI GGWCC 4 cut(s) 413, 538, 1126, 1393
XagI CCTNNNNNAGG 1 cut(s) 320
XapI RAATTY 2 cut(s) 1190, 1584
XhoI CTCGAG 1 cut(s) 290
XmaI CCCGGG 2 cut(s) 363, 453
XmaJI CCTAGG 1 cut(s) 559
XmnI GAANNNNTTC 2 cut(s) 392, 791
XspI CTAG 7 cut(s) 513, 560, 984, 1130, 1160, 1518, 1703
Zsp2I ATGCAT 1 cut(s) 908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.