MD06G1065400.v1.1
HSP70 Family

hsp70-Hsp90 organizing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0011330
Physical Location & Seq
Reverse (-)
13526606 .. 13530021
3416 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1065400.v1.1.491

Sequence Viewer

Length: 1737 bp
ATGGCCGACGAAGCCAAAGCCAAAGGGAACGCCGCTTTCTCCTCCGGCGACTTTACCACCGCCGTCAACCACTTCTCTGAAGCCATCGACCTCGCTCCCACCAACCACGTCCTCTACTCCAACCGATCCGCCGCCTACGCCTCTCTCAACAAATACTCCGAAGCCCTAGCCGACGCCAATAAGACTGTCGAGATTAAGCCCGATTGGTCCAAGGGCTACAGCCGGCTCGGCGCCGCTCACTGCGGATTGGGCCAGTACAACGACGCCGTTTCGGCTTATAAGAAGGGTCTCGAGATCGACCCCAATAACGAGGCTCTGAAGTCTGGTTTGGCCGACGCTCAAGCCGGTGCGGCCCGCTCCCGGGCTGGACCTCCGCCTATGAACCCATTTGGGGATGCGTTCTCAGGTCCCGAGATGTGGGCCAAGCTCACTGCGGACCCGTCGACCCGAGCTTTCTCGCAGCAACCTGATTTTGTGAAGATGATGCAGGAGATTCAGAAAAACCCTAGCAATCTCAATTTGTATCTGAAGGACCGGAGGGTTATGCAAGCCCTTGGGGTTTTGCTCAACGTGAAGTTACACGGTGGAGCGGGGGCGGAGGATGAGGAGATGCCTGAGTCTCCGCCGGAGCAGAAGCAACCTGAGCCCCGGAAGGAGGAGAAGAAGCCGGAGCCCCAGCCGGAGCCGGAGCCAGAGCCGATGGAGGTGAACGAGGAAGAGAGGGAGGCGAAGAAGAGGAGGGCCGAGGCAATAAAGGAGAAGGAGGCTGGTAATGCGGCTTATAAGAAGAAGGACTTCGACACAGCGATTCAGTGCTACACCAAGGCCATTGAGTTGGATGGTGAGGACATTTCGTTTATCTTGAATCGCGCTGCGACGTATTTGGAAATGGGTCAGTTTGAGGACTGCATTAAGGACTGTGAGAAGGCGGTGGAAAGAGGAAGAGAGCTAAGGTCTGACTTTAAAATGATAGCAAAAGCTTTGACTAGGAAGGGAACTGCCTACGTGAAGATGGCGAAATGCTCTAAGGACTTTGAACCTGCGATTGAGTCATTCCAGAAAGCTCTCACAGAGCATCGCAACCCAGATACCTTAAAGAAATTGAATGATGCTGAGAAAGCAAAGAAGGATCTAGAGCAACAAGAGTATTATGATCCGAAGTTAGCTGATGAGGAGCGTGAGAAAGGAAATGAATATTTCAAGCAGCAGAAGTACCCAGAGGCTATTAAGCAGTACACCGAAGCTCTGAGAAGGAACCCCAAAGATCCAAAGGCATATAGCAACAGAGCTGCATGTTATACAAAACTCGGGGCAATGCCCGAGGGGCTAAAAGATGCAGAGCAGTGCATTGAGCTTGATCCAACCTTTGCGAAGGGTTACACCAGAAAGGGTGCTGTCCAGTTTTTCATGAAAGAATATGAGAAAGCTTTGGAAACATACCAGGAGGGGTTGAAACACAATCCTAGCAACCAGGAATTGCTTGATGGTGTGCGAAGATGTGTAGAGCAAATTAACAAAGCTAGCCGGGGGGATCTGAGTCCCGAGGAATTGAAGGAAAGACAGGCTAAGGGAATGCAGGACCCAGAAATTCAAAATATTCTCCAAGATCCTGTTATGAGACAGGTGTTAACCGACTTCCAGGAAAACCCCAAGGCTGCTCAGGAACACACAAAAAACCCTATGGTGATGAGCAAGATCCAGAAGCTCGTCAGTGCAGGAATTGTCCAGCTTCGGTAA

Protein Analysis

579

Amino Acids

64.96

Weight (kDa)

5.84

Isoelectric Point (pI)

44.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_BSK1_C PF25575 4 - 71 3.6e-09 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_1 PF00515 71 - 103 8.5e-08 Tetratricopeptide repeat
TPR_2 PF07719 71 - 103 2.2e-06 Tetratricopeptide repeat
STI1-HOP_DP PF17830 137 - 189 5.7e-21 STI1/HOP, DP domain
TPR_BSK1_C PF25575 245 - 315 1.8e-08 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_1 PF00515 257 - 281 3e-06 Tetratricopeptide repeat
TPR_11 PF13414 257 - 298 7.7e-07 TPR repeat
TPR_BSK1_C PF25575 369 - 456 2.4e-06 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_1 PF00515 395 - 422 6.6e-07 Tetratricopeptide repeat
TPR_16 PF13432 395 - 446 7e-08 Tetratricopeptide repeat
TPR_11 PF13414 396 - 437 3.9e-11 TPR repeat
TPR_1 PF00515 423 - 456 2.7e-06 Tetratricopeptide repeat
TPR_1 PF00515 457 - 490 1.8e-07 Tetratricopeptide repeat
STI1-HOP_DP PF17830 519 - 570 9.6e-16 STI1/HOP, DP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011330)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62740 AT4G12400 AT4G12400
fragaria_vesca FvH4_5g00400 FvH4_5g00400 FvH4_5g00400
malus_domestica MD04G1081900.v1.1 MD06G1065400.v1.1
prunus_persica Prupe.5G076500_v2.0.a1
pyrus_communis pycom04g07380 pycom06g05640
rosa_chinensis RchiOBHm_Chr7g0202131
rosa_laevigata RLG00000003623
rosa_multiflora Rmu_ssc0000228.1_g000003
rosa_roxburghii Rroxscaffold_3G00254830
rosa_rugosa Rorug07G0068200 Rorug07G0068300
rosa_samantha Rh7AG195700 Rh7CG206800
rosa_wichuraiana Rw7G017140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 279, 783
Acc36I ACCTGC 1 cut(s) 1048
AccB1I GGYRCC 1 cut(s) 230
AccBSI CCGCTC 3 cut(s) 236, 357, 590
AccI GTMKAC 1 cut(s) 443
AccII CGCG 1 cut(s) 870
AclWI GGATC 8 cut(s) 120, 1137, 1148, 1259, 1352, 1539, 1601, 1690
AcoI YGGCCR 2 cut(s) 3, 330
AcsI RAATTY 1 cut(s) 1587
AcuI CTGAAG 3 cut(s) 99, 338, 548
AcyI GRCGYC 3 cut(s) 174, 231, 264
AfaI GTAC 3 cut(s) 257, 1214, 1235
AfiI CCNNNNNNNGG 5 cut(s) 360, 361, 391, 417, 655
AgsI TTSAA 7 cut(s) 865, 1037, 1105, 1201, 1453, 1552, 1592
AjiI CACGTC 1 cut(s) 109
AjnI CCWGG 3 cut(s) 1440, 1470, 1638
AjuI GAANNNNNNNTTGG 2 cut(s) 311, 343
Alw26I GTCTC 3 cut(s) 293, 624, 1612
AlwI GGATC 8 cut(s) 120, 1137, 1148, 1259, 1352, 1539, 1601, 1690
Ama87I CYCGRG 7 cut(s) 290, 360, 410, 447, 1307, 1319, 1541
AoxI GGCC 7 cut(s) 3, 250, 330, 351, 420, 741, 825
ApeKI GCWGC 5 cut(s) 460, 872, 1204, 1289, 1655
ApoI RAATTY 1 cut(s) 1587
Asp700I GAANNNNTTC 1 cut(s) 794
AspLEI GCGC 2 cut(s) 233, 872
AsuC2I CCSGG 4 cut(s) 361, 362, 649, 1526
AsuHPI GGTGA 3 cut(s) 718, 854, 1696
AsuNHI GCTAGC 1 cut(s) 1520
AvaI CYCGRG 7 cut(s) 290, 360, 410, 447, 1307, 1319, 1541
AvaII GGWCC 6 cut(s) 207, 368, 407, 436, 532, 1579
BanI GGYRCC 1 cut(s) 230
BanII GRGCYC 2 cut(s) 648, 675
BbvI GCAGC 5 cut(s) 472, 859, 1216, 1276, 1642
BccI CCATC 5 cut(s) 92, 694, 833, 1006, 1478
BceAI ACGGC 2 cut(s) 47, 251
BciT130I CCWGG 3 cut(s) 1442, 1472, 1640
BcnI CCSGG 4 cut(s) 361, 362, 649, 1526
BcoDI GTCTC 3 cut(s) 293, 624, 1612
BfaI CTAG 6 cut(s) 167, 507, 987, 1133, 1464, 1521
BfmI CTRYAG 1 cut(s) 217
BfoI RGCGCY 1 cut(s) 234
BfuAI ACCTGC 1 cut(s) 1048
BglI GCCNNNNNGGC 4 cut(s) 228, 272, 350, 1324
Bme1390I CCNGG 7 cut(s) 361, 362, 649, 1442, 1472, 1526, 1640
Bme18I GGWCC 6 cut(s) 207, 368, 407, 436, 532, 1579
BmeT110I CYCGRG 7 cut(s) 290, 360, 410, 447, 1307, 1319, 1541
BmgBI CACGTC 1 cut(s) 109
BmiI GGNNCC 8 cut(s) 232, 409, 438, 672, 684, 690, 1256, 1581
BmrFI CCNGG 7 cut(s) 361, 362, 649, 1442, 1472, 1526, 1640
BmsI GCATC 6 cut(s) 385, 474, 600, 1084, 1099, 1324
BmtI GCTAGC 1 cut(s) 1524
Bpu10I CCTNAGC 4 cut(s) 642, 950, 1566, 1659
BpuEI CTTGAG 1 cut(s) 324
BpuMI CCSGG 4 cut(s) 361, 362, 649, 1526
BsaAI YACGTR 1 cut(s) 1006
BsaHI GRCGYC 3 cut(s) 174, 231, 264
BsaI GGTCTC 1 cut(s) 293
BsaWI WCCGGW 1 cut(s) 534
BsaXI ACNNNNNCTCC 2 cut(s) 140, 170
Bsc4I CCNNNNNNNGG 5 cut(s) 360, 361, 391, 417, 655
Bse118I RCCGGY 2 cut(s) 222, 344
Bse1I ACTGG 2 cut(s) 253, 1399
Bse3DI GCAATG 1 cut(s) 1320
BseBI CCWGG 3 cut(s) 1442, 1472, 1640
BseGI GGATG 3 cut(s) 400, 607, 844
BseLI CCNNNNNNNGG 5 cut(s) 360, 361, 391, 417, 655
BseMI GCAATG 1 cut(s) 1320
BseMII CTCAG 7 cut(s) 417, 606, 633, 1104, 1238, 1526, 1673
BseNI ACTGG 2 cut(s) 253, 1399
BseRI GAGGAG 5 cut(s) 31, 620, 671, 751, 1187
BseXI GCAGC 5 cut(s) 472, 859, 1216, 1276, 1642
BseYI CCCAGC 1 cut(s) 675
BsgI GTGCAG 1 cut(s) 1734
Bsh1236I CGCG 1 cut(s) 870
BshFI GGCC 7 cut(s) 5, 252, 332, 353, 422, 743, 827
BshNI GGYRCC 1 cut(s) 230
BsiHKCI CYCGRG 7 cut(s) 290, 360, 410, 447, 1307, 1319, 1541
BslFI GGGAC 2 cut(s) 393, 1524
BslI CCNNNNNNNGG 5 cut(s) 360, 361, 391, 417, 655
BsmAI GTCTC 3 cut(s) 293, 624, 1612
BsmFI GGGAC 2 cut(s) 393, 1524
BsmI GAATGC 1 cut(s) 1578
BsnI GGCC 7 cut(s) 5, 252, 332, 353, 422, 743, 827
Bso31I GGTCTC 1 cut(s) 293
BsoBI CYCGRG 7 cut(s) 290, 360, 410, 447, 1307, 1319, 1541
Bsp1286I GDGCHC 2 cut(s) 648, 675
Bsp143I GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1531, 1606, 1695
BspANI GGCC 7 cut(s) 5, 252, 332, 353, 422, 743, 827
BspCNI CTCAG 7 cut(s) 416, 607, 634, 1105, 1239, 1527, 1672
BspFNI CGCG 1 cut(s) 870
BspHI TCATGA 1 cut(s) 1407
BspLI GGNNCC 8 cut(s) 232, 409, 438, 672, 684, 690, 1256, 1581
BspMI ACCTGC 1 cut(s) 1048
BspOI GCTAGC 1 cut(s) 1524
BspPI GGATC 8 cut(s) 120, 1137, 1148, 1259, 1352, 1539, 1601, 1690
BspT107I GGYRCC 1 cut(s) 230
BspTNI GGTCTC 1 cut(s) 293
BsrBI CCGCTC 3 cut(s) 236, 357, 590
BsrDI GCAATG 1 cut(s) 1320
BsrFI RCCGGY 2 cut(s) 222, 344
BsrI ACTGG 2 cut(s) 253, 1399
BssAI RCCGGY 2 cut(s) 222, 344
BssMI GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1531, 1606, 1695
BssNI GRCGYC 3 cut(s) 174, 231, 264
BssT1I CCWWGG 4 cut(s) 210, 553, 822, 1650
Bst2UI CCWGG 3 cut(s) 1442, 1472, 1640
Bst4CI ACNGT 3 cut(s) 187, 584, 920
Bst6I CTCTTC 3 cut(s) 711, 728, 937
BstACI GRCGYC 3 cut(s) 174, 231, 264
BstBAI YACGTR 1 cut(s) 1006
BstC8I GCNNGC 4 cut(s) 224, 355, 549, 1522
BstF5I GGATG 3 cut(s) 400, 607, 844
BstFNI CGCG 1 cut(s) 870
BstH2I RGCGCY 1 cut(s) 234
BstHHI GCGC 2 cut(s) 233, 872
BstKTI GATC 9 cut(s) 128, 297, 1132, 1156, 1267, 1360, 1534, 1609, 1698
BstMAI GTCTC 3 cut(s) 293, 624, 1612
BstMBI GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1531, 1606, 1695
BstNI CCWGG 3 cut(s) 1442, 1472, 1640
BstNSI RCATGY 1 cut(s) 1296
BstSCI CCNGG 7 cut(s) 359, 360, 647, 1440, 1470, 1524, 1638
BstSFI CTRYAG 1 cut(s) 217
BstUI CGCG 1 cut(s) 870
BstV1I GCAGC 5 cut(s) 472, 859, 1216, 1276, 1642
BstX2I RGATCY 5 cut(s) 1129, 1264, 1531, 1606, 1695
BstXI CCANNNNNNTGG 1 cut(s) 835
BstYI RGATCY 5 cut(s) 1129, 1264, 1531, 1606, 1695
BsuRI GGCC 7 cut(s) 5, 252, 332, 353, 422, 743, 827
BtgZI GCGATG 1 cut(s) 1061
BtrI CACGTC 1 cut(s) 109
BtsCI GGATG 3 cut(s) 400, 607, 844
BtsI GCAGTG 3 cut(s) 238, 429, 1349
BtsIMutI CAGTG 5 cut(s) 238, 429, 818, 1349, 1717
BveI ACCTGC 1 cut(s) 1048
Cac8I GCNNGC 4 cut(s) 224, 355, 549, 1522
CciI TCATGA 1 cut(s) 1407
CfoI GCGC 2 cut(s) 233, 872
Cfr10I RCCGGY 2 cut(s) 222, 344
Cfr9I CCCGGG 1 cut(s) 360
CseI GACGC 3 cut(s) 182, 272, 344
Csp6I GTAC 3 cut(s) 256, 1213, 1234
CviAII CATG 2 cut(s) 1293, 1408
CviQI GTAC 3 cut(s) 256, 1213, 1234
DinI GGCGCC 1 cut(s) 232
DpnI GATC 9 cut(s) 127, 296, 1131, 1155, 1266, 1359, 1533, 1608, 1697
DpnII GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1531, 1606, 1695
DraI TTTAAA 1 cut(s) 964
EaeI YGGCCR 2 cut(s) 3, 330
Eam1104I CTCTTC 3 cut(s) 711, 728, 937
EarI CTCTTC 3 cut(s) 711, 728, 937
EciI GGCGGA 4 cut(s) 118, 363, 611, 612
Eco130I CCWWGG 4 cut(s) 210, 553, 822, 1650
Eco24I GRGCYC 2 cut(s) 648, 675
Eco31I GGTCTC 1 cut(s) 293
Eco47I GGWCC 6 cut(s) 207, 368, 407, 436, 532, 1579
Eco57I CTGAAG 3 cut(s) 99, 338, 548
Eco88I CYCGRG 7 cut(s) 290, 360, 410, 447, 1307, 1319, 1541
EcoO109I RGGNCCY 2 cut(s) 407, 1579
EcoRII CCWGG 3 cut(s) 1440, 1470, 1638
EcoT14I CCWWGG 4 cut(s) 210, 553, 822, 1650
EcoT38I GRGCYC 2 cut(s) 648, 675
EgeI GGCGCC 1 cut(s) 232
EheI GGCGCC 1 cut(s) 232
ErhI CCWWGG 4 cut(s) 210, 553, 822, 1650
FaeI CATG 2 cut(s) 1296, 1411
FalI AAGNNNNNCTT 2 cut(s) 779, 811
FaqI GGGAC 2 cut(s) 393, 1524
FatI CATG 2 cut(s) 1292, 1407
FauI CCCGC 2 cut(s) 362, 583
FblI GTMKAC 1 cut(s) 443
FokI GGATG 3 cut(s) 407, 614, 851
FriOI GRGCYC 2 cut(s) 648, 675
FspBI CTAG 6 cut(s) 167, 507, 987, 1133, 1464, 1521
GlaI GCGC 2 cut(s) 232, 871
GsaI CCCAGC 1 cut(s) 679
HaeII RGCGCY 1 cut(s) 234
HaeIII GGCC 7 cut(s) 5, 252, 332, 353, 422, 743, 827
HgaI GACGC 3 cut(s) 182, 272, 344
HhaI GCGC 2 cut(s) 233, 872
Hin1I GRCGYC 3 cut(s) 174, 231, 264
Hin1II CATG 2 cut(s) 1296, 1411
Hin6I GCGC 2 cut(s) 231, 870
HinP1I GCGC 2 cut(s) 231, 870
HincII GTYRAC 3 cut(s) 67, 444, 1629
HindII GTYRAC 3 cut(s) 67, 444, 1629
HindIII AAGCTT 2 cut(s) 978, 1425
HinfI GANTC 6 cut(s) 493, 617, 808, 865, 1049, 1537
HpaI GTTAAC 1 cut(s) 1629
HphI GGTGA 3 cut(s) 718, 854, 1696
Hpy166II GTNNAC 5 cut(s) 67, 444, 709, 1236, 1629
Hpy188I TCNGA 9 cut(s) 79, 160, 318, 498, 528, 958, 1158, 1248, 1536
Hpy8I GTNNAC 5 cut(s) 67, 444, 709, 1236, 1629
Hpy99I CGWCG 6 cut(s) 11, 176, 266, 338, 445, 880
HpyCH4III ACNGT 3 cut(s) 187, 584, 920
HpyCH4IV ACGT 4 cut(s) 108, 570, 878, 1005
HpyCH4V TGCA 8 cut(s) 487, 547, 909, 1292, 1337, 1347, 1576, 1715
HpySE526I ACGT 4 cut(s) 108, 570, 878, 1005
Hsp92I GRCGYC 3 cut(s) 174, 231, 264
Hsp92II CATG 2 cut(s) 1296, 1411
HspAI GCGC 2 cut(s) 231, 870
KasI GGCGCC 1 cut(s) 230
KroI GCCGGC 1 cut(s) 222
KroNI GCCGGC 1 cut(s) 224
KspAI GTTAAC 1 cut(s) 1629
Kzo9I GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1531, 1606, 1695
LmnI GCTCC 8 cut(s) 100, 362, 587, 628, 670, 682, 688, 1174
Lsp1109I GCAGC 5 cut(s) 472, 859, 1216, 1276, 1642
LweI GCATC 6 cut(s) 385, 474, 600, 1084, 1099, 1324
MaeI CTAG 6 cut(s) 167, 507, 987, 1133, 1464, 1521
MaeII ACGT 4 cut(s) 108, 570, 878, 1005
MaeIII GTNAC 2 cut(s) 576, 1376
MalI GATC 9 cut(s) 127, 296, 1131, 1155, 1266, 1359, 1533, 1608, 1697
MbiI CCGCTC 3 cut(s) 236, 357, 590
MboI GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1531, 1606, 1695
MboII GAAGA 9 cut(s) 490, 673, 728, 742, 745, 799, 954, 1021, 1506
MflI RGATCY 5 cut(s) 1129, 1264, 1531, 1606, 1695
MhlI GDGCHC 2 cut(s) 648, 675
MluCI AATT 7 cut(s) 517, 1100, 1475, 1509, 1547, 1587, 1719
Mly113I GGCGCC 1 cut(s) 231
MlyI GAGTC 3 cut(s) 626, 1058, 1546
MmeI TCCRAC 3 cut(s) 144, 816, 1385
MroNI GCCGGC 1 cut(s) 222
MroXI GAANNNNTTC 1 cut(s) 794
MseI TTAA 7 cut(s) 195, 912, 963, 1094, 1227, 1512, 1628
MspR9I CCNGG 7 cut(s) 361, 362, 649, 1442, 1472, 1526, 1640
Mva1269I GAATGC 1 cut(s) 1578
MvaI CCWGG 3 cut(s) 1442, 1472, 1640
MvnI CGCG 1 cut(s) 870
NaeI GCCGGC 1 cut(s) 224
NarI GGCGCC 1 cut(s) 231
NciI CCSGG 4 cut(s) 361, 362, 649, 1526
NdeII GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1531, 1606, 1695
NgoMIV GCCGGC 1 cut(s) 222
NheI GCTAGC 1 cut(s) 1520
NlaIII CATG 2 cut(s) 1296, 1411
NlaIV GGNNCC 8 cut(s) 232, 409, 438, 672, 684, 690, 1256, 1581
NmeAIII GCCGAG 2 cut(s) 207, 769
NspI RCATGY 1 cut(s) 1296
PaeR7I CTCGAG 1 cut(s) 290
PagI TCATGA 1 cut(s) 1407
PctI GAATGC 1 cut(s) 1578
PdiI GCCGGC 1 cut(s) 224
PdmI GAANNNNTTC 1 cut(s) 794
PfeI GAWTC 3 cut(s) 493, 808, 865
PfoI TCCNGGA 1 cut(s) 1638
PleI GAGTC 3 cut(s) 625, 1057, 1545
PluTI GGCGCC 1 cut(s) 234
PpsI GAGTC 3 cut(s) 625, 1057, 1545
Ppu21I YACGTR 1 cut(s) 1006
PpuMI RGGWCCY 2 cut(s) 407, 1579
PsiI TTATAA 2 cut(s) 279, 783
Psp5II RGGWCCY 2 cut(s) 407, 1579
Psp6I CCWGG 3 cut(s) 1440, 1470, 1638
PspFI CCCAGC 1 cut(s) 675
PspGI CCWGG 3 cut(s) 1440, 1470, 1638
PspN4I GGNNCC 8 cut(s) 232, 409, 438, 672, 684, 690, 1256, 1581
PspPPI RGGWCCY 2 cut(s) 407, 1579
PsuI RGATCY 5 cut(s) 1129, 1264, 1531, 1606, 1695
RsaI GTAC 3 cut(s) 257, 1214, 1235
RsaNI GTAC 3 cut(s) 256, 1213, 1234
SalI GTCGAC 1 cut(s) 442
SaqAI TTAA 7 cut(s) 195, 912, 963, 1094, 1227, 1512, 1628
Sau3AI GATC 9 cut(s) 125, 294, 1129, 1153, 1264, 1357, 1531, 1606, 1695
SchI GAGTC 3 cut(s) 626, 1058, 1546
ScrFI CCNGG 7 cut(s) 361, 362, 649, 1442, 1472, 1526, 1640
SduI GDGCHC 2 cut(s) 648, 675
SfaNI GCATC 6 cut(s) 385, 474, 600, 1084, 1099, 1324
SfcI CTRYAG 1 cut(s) 217
SfoI GGCGCC 1 cut(s) 232
Sfr274I CTCGAG 1 cut(s) 290
SinI GGWCC 6 cut(s) 207, 368, 407, 436, 532, 1579
SlaI CTCGAG 1 cut(s) 290
SmaI CCCGGG 1 cut(s) 362
SmlI CTYRAG 2 cut(s) 290, 339
SmoI CTYRAG 2 cut(s) 290, 339
Sse9I AATT 7 cut(s) 517, 1100, 1475, 1509, 1547, 1587, 1719
SspDI GGCGCC 1 cut(s) 230
SspI AATATT 2 cut(s) 1196, 1597
SspMI CTAG 6 cut(s) 167, 507, 987, 1133, 1464, 1521
StyD4I CCNGG 7 cut(s) 359, 360, 647, 1440, 1470, 1524, 1638
StyI CCWWGG 4 cut(s) 210, 553, 822, 1650
TaaI ACNGT 3 cut(s) 187, 584, 920
TaiI ACGT 4 cut(s) 111, 573, 881, 1008
TaqI TCGA 6 cut(s) 87, 189, 291, 297, 443, 798
TasI AATT 7 cut(s) 517, 1100, 1475, 1509, 1547, 1587, 1719
TatI WGTACW 2 cut(s) 255, 1233
TauI GCSGC 5 cut(s) 35, 134, 236, 353, 779
TfiI GAWTC 3 cut(s) 493, 808, 865
Tru1I TTAA 7 cut(s) 195, 912, 963, 1094, 1227, 1512, 1628
Tru9I TTAA 7 cut(s) 195, 912, 963, 1094, 1227, 1512, 1628
TscAI CASTG 5 cut(s) 245, 436, 818, 1349, 1717
TseI GCWGC 5 cut(s) 460, 872, 1204, 1289, 1655
TspDTI ATGAA 4 cut(s) 395, 1206, 1396, 1424
TspMI CCCGGG 1 cut(s) 360
TspRI CASTG 5 cut(s) 245, 436, 818, 1349, 1717
VpaK11BI GGWCC 6 cut(s) 207, 368, 407, 436, 532, 1579
XapI RAATTY 1 cut(s) 1587
XbaI TCTAGA 1 cut(s) 1132
XceI RCATGY 1 cut(s) 1296
XhoI CTCGAG 1 cut(s) 290
XmaI CCCGGG 1 cut(s) 360
XmiI GTMKAC 1 cut(s) 443
XmnI GAANNNNTTC 1 cut(s) 794
XspI CTAG 6 cut(s) 167, 507, 987, 1133, 1464, 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.