Rw7G017140
HSP70 Family

hsp70-Hsp90 organizing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0011330
Physical Location & Seq
Reverse (-)
17783642 .. 17786702
3061 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G017140.1

Sequence Viewer

Length: 1746 bp
ATGGCCGACGAAGCCAAAGCCAAGGGCAACGCCGCCTACTCCGCCGGCGACTACACCGCCGCCATTACCCACTTCACCGAAGCTATCAACCTCGCTCCCACCAACCACGTCCTCTACTCCAACCGATCCGCCTCCTACGCCAACCTCCACAAATACTCCGACGCCCTCTCCGACGCCAAGAAGACCGTCGAGCTCAAGCCCGACTGGGTCAAAGGCTACAGCCGCCTCGGCTCCGCCCACCACGGCCTCGGCCACTTCGACGACGCCGTTTCCGCTTACAAGAAGGGCCTCGAGATTGATCCCAACAACGCCGCCCTTAAAGAGGGCTTGGCCGAGAGTCAGTCCGCCGCTTCCCGCGCCTCCCGAGCACGAGCCCCGCCGCCGACGAACCTCTTCGGCGACGCGTTCTCGGGTCCTCAGATGTGGGCCAAGCTCACGGCCGACCCGAGTACCCGGGCCTTTATGCAGCAGCCGGATTTCGTGAACATGATGCAGGAGATTCAGAAAAACCCTAGCAATCTCAATCTTTATTTGAAGGACCAGAGGGTTATGCAAGCCTTAGGGGTTTTGCTCAATGTGAAGCTCCAGGGAGGCGCGTCGGAGGACGACGATATGCCGGATTTTCCGTCGGAGAGGGCGCGGTCTGCGGAGGCCGCTGCTGAGCCGCAGAAGAAGGAGGAGAAGAAGCCGGAACCGGAGCCGGTGCCGATGGAAGTGCCGGAGGAGGAGAAGGAGGCCAGGAAGAGGAAAGCTGAGGCTTTAAAGGAGAAGGAGGCTGGCAATGCGGCTTATAAGAAGAAGGATTTCGACACGGCTATTCAGCACTATACCAAGGCAATGGAGATAGATGATGAAGATATTTCGTACTTGTTGAATCGTGCTGCGACTTACTTGGAAATGGGTCAGTATGATGAATGCATTAAAGACTGTGACAAGGCTGTGGAAAGGGGAAGAGAGGTGAGGGCGGACTTTAAGATGATAGCAAAAGCTTTGACTAGGAAGGGAACTGCCATTGTGAAAACAGCAAAAACCTCGAAAGACTATGAGCCTGCCATTGAGATATTCCAGAAAGCTCTCACAGAGCATCGCAACCCTGACACCCTAAAGAAATTGAATGACGCTGAGAAAGCTAAGAAGGACCTAGAGCAACAAGAGTATTTTGATCCAAAGCTAGCAGAGGAGGAGCGAGAGAAAGGCAATGAATTCTTCAAGCAACAGAAGTACCCAGAGGCTATTACGCATTACTCTGAATCTTTGAGAAGGAATCCAAAGGATCCAAAGGCATATAGCAATAGAGCTGCTTGCTATACAAAGTTGGGGGCAATGCCAGAGGGATTGAAGGATGCTGAGAAGTGCATTGAGCTTGACCCAACCTTTTCAAAGGGTTATACCAGAAAAGGTGCAGTCCAGTTTTTCATGAGAGAGTATGACAAAGCTTTGGAAACGTATCAAGAAGGTCTGAAGCATGATCCTGGCAACCAGGACTTGCTTGATGGTGTGAGGAGATGTGTAGGGCAGATCAACAAAGCTAGCCGTGGGGATCTGAGTGCCGATGAATTGAAGGAGAGACAGGCTAAGGGAATGCAAGACCCAGAAATTCAGAATATCCTTTCAGATCCTGTTATGAGACAGGTGTTGGTTGATTTCCAGGAAAATCCCAAAGCTGCTCAGGAACACTCAAAGAACCCGATGGTGATGGCCAAAATCCAGAAGCTAGTGAGTGCTGGAATTGTCCAGATTAAGTGA

Protein Analysis

581

Amino Acids

65.12

Weight (kDa)

6.22

Isoelectric Point (pI)

35.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_BSK1_C PF25575 4 - 70 1.2e-06 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_1 PF00515 71 - 103 2.8e-07 Tetratricopeptide repeat
TPR_2 PF07719 71 - 103 3.8e-06 Tetratricopeptide repeat
STI1-HOP_DP PF17830 139 - 191 2.8e-22 STI1/HOP, DP domain
TPR_BSK1_C PF25575 250 - 319 5.1e-08 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_11 PF13414 260 - 301 1.9e-06 TPR repeat
TPR_1 PF00515 290 - 315 4e-06 Tetratricopeptide repeat
TPR_12 PF13424 290 - 359 5e-07 Tetratricopeptide repeat
TPR_BSK1_C PF25575 372 - 459 9.8e-06 Serine/threonine-protein kinase BSK1-like, TPR repeats
TPR_16 PF13432 398 - 449 7.5e-06 Tetratricopeptide repeat
TPR_11 PF13414 399 - 440 7e-10 TPR repeat
TPR_1 PF00515 426 - 459 1.2e-06 Tetratricopeptide repeat
TPR_1 PF00515 461 - 493 4.1e-06 Tetratricopeptide repeat
STI1-HOP_DP PF17830 522 - 573 1.6e-15 STI1/HOP, DP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011330)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62740 AT4G12400 AT4G12400
fragaria_vesca FvH4_5g00400 FvH4_5g00400 FvH4_5g00400
malus_domestica MD04G1081900.v1.1 MD06G1065400.v1.1
prunus_persica Prupe.5G076500_v2.0.a1
pyrus_communis pycom04g07380 pycom06g05640
rosa_chinensis RchiOBHm_Chr7g0202131
rosa_laevigata RLG00000003623
rosa_multiflora Rmu_ssc0000228.1_g000003
rosa_roxburghii Rroxscaffold_3G00254830
rosa_rugosa Rorug07G0068200 Rorug07G0068300
rosa_samantha Rh7AG195700 Rh7CG206800
rosa_wichuraiana Rw7G017140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 792
AccB1I GGYRCC 1 cut(s) 703
AccII CGCG 4 cut(s) 357, 404, 596, 640
AclWI GGATC 8 cut(s) 120, 293, 1157, 1268, 1281, 1463, 1548, 1610
AcoI YGGCCR 5 cut(s) 3, 250, 330, 438, 1698
AcsI RAATTY 2 cut(s) 1202, 1596
AcuI CTGAAG 1 cut(s) 1481
AcyI GRCGYC 3 cut(s) 162, 174, 264
AfaI GTAC 3 cut(s) 451, 866, 1223
AfiI CCNNNNNNNGG 2 cut(s) 322, 744
AflIII ACRYGT 1 cut(s) 402
AgsI TTSAA 7 cut(s) 535, 874, 1114, 1210, 1339, 1380, 1561
AjiI CACGTC 1 cut(s) 109
AjnI CCWGG 5 cut(s) 585, 737, 1471, 1479, 1647
Alw21I GWGCWC 2 cut(s) 195, 370
Alw26I GTCTC 2 cut(s) 1561, 1621
AlwI GGATC 8 cut(s) 120, 293, 1157, 1268, 1281, 1463, 1548, 1610
AlwNI CAGNNNCTG 1 cut(s) 1619
Ama87I CYCGRG 5 cut(s) 290, 363, 409, 445, 453
ApeKI GCWGC 6 cut(s) 466, 469, 656, 881, 1298, 1664
ApoI RAATTY 2 cut(s) 1202, 1596
Asp700I GAANNNNTTC 2 cut(s) 392, 803
AspLEI GCGC 3 cut(s) 359, 596, 640
AspS9I GGNCC 6 cut(s) 286, 413, 426, 456, 538, 1138
AsuC2I CCSGG 2 cut(s) 454, 455
AsuHPI GGTGA 3 cut(s) 67, 970, 1705
AsuNHI GCTAGC 2 cut(s) 1171, 1529
AvaI CYCGRG 5 cut(s) 290, 363, 409, 445, 453
AvaII GGWCC 3 cut(s) 413, 538, 1138
AxyI CCTNAGG 1 cut(s) 559
BaeI ACNNNNGTAYC 4 cut(s) 433, 466, 1205, 1238
BalI TGGCCA 1 cut(s) 1700
BamHI GGATCC 1 cut(s) 1273
BanI GGYRCC 1 cut(s) 703
BanII GRGCYC 2 cut(s) 195, 376
BauI CACGAG 1 cut(s) 369
BbsI GAAGAC 1 cut(s) 188
Bbv12I GWGCWC 2 cut(s) 195, 370
BbvCI CCTCAGC 1 cut(s) 753
BbvI GCAGC 6 cut(s) 478, 481, 643, 868, 1285, 1651
BccI CCATC 4 cut(s) 703, 1487, 1684, 1690
BceAI ACGGC 5 cut(s) 251, 259, 453, 828, 1518
BcgI CGANNNNNNTGC 4 cut(s) 697, 731, 1014, 1048
BciT130I CCWGG 5 cut(s) 587, 739, 1473, 1481, 1649
BcnI CCSGG 2 cut(s) 454, 455
BcoDI GTCTC 2 cut(s) 1561, 1621
BfaI CTAG 6 cut(s) 513, 996, 1142, 1172, 1530, 1715
BfmI CTRYAG 1 cut(s) 217
BglI GCCNNNNNGGC 1 cut(s) 228
BlpI GCTNAGC 1 cut(s) 660
Bme1390I CCNGG 7 cut(s) 454, 455, 587, 739, 1473, 1481, 1649
Bme18I GGWCC 3 cut(s) 413, 538, 1138
BmeT110I CYCGRG 5 cut(s) 290, 363, 409, 445, 453
BmgBI CACGTC 1 cut(s) 109
BmgT120I GGNCC 6 cut(s) 286, 413, 426, 456, 538, 1138
BmiI GGNNCC 6 cut(s) 232, 414, 693, 699, 705, 1275
BmrFI CCNGG 7 cut(s) 454, 455, 587, 739, 1473, 1481, 1649
BmrI ACTGGG 1 cut(s) 214
BmsI GCATC 3 cut(s) 480, 1093, 1333
BmtI GCTAGC 2 cut(s) 1175, 1533
BmuI ACTGGG 1 cut(s) 214
BpiI GAAGAC 1 cut(s) 188
BpmI CTGGAG 1 cut(s) 569
Bpu10I CCTNAGC 3 cut(s) 753, 1575, 1668
Bpu1102I GCTNAGC 1 cut(s) 660
BpuEI CTTGAG 1 cut(s) 179
BpuMI CCSGG 2 cut(s) 454, 455
BsaHI GRCGYC 3 cut(s) 162, 174, 264
BsaJI CCNNGG 8 cut(s) 21, 226, 241, 247, 453, 586, 831, 1534
BsaWI WCCGGW 1 cut(s) 694
BsaXI ACNNNNNCTCC 4 cut(s) 140, 152, 170, 182
Bsc4I CCNNNNNNNGG 2 cut(s) 322, 744
Bse118I RCCGGY 2 cut(s) 44, 700
Bse1I ACTGG 2 cut(s) 209, 1408
Bse21I CCTNAGG 1 cut(s) 559
Bse3DI GCAATG 4 cut(s) 787, 843, 1204, 1329
BseBI CCWGG 5 cut(s) 587, 739, 1473, 1481, 1649
BseDI CCNNGG 8 cut(s) 21, 226, 241, 247, 453, 586, 831, 1534
BseGI GGATG 1 cut(s) 1348
BseLI CCNNNNNNNGG 2 cut(s) 322, 744
BseMI GCAATG 4 cut(s) 787, 843, 1204, 1329
BseMII CTCAG 7 cut(s) 431, 651, 744, 1113, 1338, 1535, 1682
BseNI ACTGG 2 cut(s) 209, 1408
BseRI GAGGAG 6 cut(s) 692, 737, 740, 1193, 1196, 1516
BseX3I CGGCCG 1 cut(s) 438
BseXI GCAGC 6 cut(s) 478, 481, 643, 868, 1285, 1651
BsgI GTGCAG 1 cut(s) 1422
Bsh1236I CGCG 4 cut(s) 357, 404, 596, 640
Bsh1285I CGRYCG 1 cut(s) 441
BshNI GGYRCC 1 cut(s) 703
BsiEI CGRYCG 1 cut(s) 441
BsiHKAI GWGCWC 2 cut(s) 195, 370
BsiHKCI CYCGRG 5 cut(s) 290, 363, 409, 445, 453
BsiSI CCGG 8 cut(s) 45, 454, 473, 617, 689, 695, 701, 719
BslI CCNNNNNNNGG 2 cut(s) 322, 744
BsmAI GTCTC 2 cut(s) 1561, 1621
BsmI GAATGC 2 cut(s) 920, 1587
BsoBI CYCGRG 5 cut(s) 290, 363, 409, 445, 453
Bsp1286I GDGCHC 3 cut(s) 195, 370, 376
Bsp143I GATC 8 cut(s) 125, 298, 1162, 1273, 1468, 1518, 1540, 1615
Bsp1720I GCTNAGC 1 cut(s) 660
BspCNI CTCAG 7 cut(s) 430, 652, 745, 1114, 1339, 1536, 1681
BspFNI CGCG 4 cut(s) 357, 404, 596, 640
BspHI TCATGA 1 cut(s) 1416
BspLI GGNNCC 6 cut(s) 232, 414, 693, 699, 705, 1275
BspOI GCTAGC 2 cut(s) 1175, 1533
BspPI GGATC 8 cut(s) 120, 293, 1157, 1268, 1281, 1463, 1548, 1610
BspT107I GGYRCC 1 cut(s) 703
BsrDI GCAATG 4 cut(s) 787, 843, 1204, 1329
BsrFI RCCGGY 2 cut(s) 44, 700
BsrI ACTGG 2 cut(s) 209, 1408
BssAI RCCGGY 2 cut(s) 44, 700
BssECI CCNNGG 8 cut(s) 21, 226, 241, 247, 453, 586, 831, 1534
BssMI GATC 8 cut(s) 125, 298, 1162, 1273, 1468, 1518, 1540, 1615
BssNI GRCGYC 3 cut(s) 162, 174, 264
BssSI CACGAG 1 cut(s) 369
BssT1I CCWWGG 2 cut(s) 21, 831
Bst2BI CACGAG 1 cut(s) 369
Bst2UI CCWGG 5 cut(s) 587, 739, 1473, 1481, 1649
Bst4CI ACNGT 2 cut(s) 187, 929
Bst6I CTCTTC 3 cut(s) 398, 737, 946
BstACI GRCGYC 3 cut(s) 162, 174, 264
BstC8I GCNNGC 7 cut(s) 46, 555, 778, 1050, 1173, 1303, 1531
BstDSI CCRYGG 2 cut(s) 241, 1534
BstENI CCTNNNNNAGG 1 cut(s) 320
BstF5I GGATG 1 cut(s) 1348
BstFNI CGCG 4 cut(s) 357, 404, 596, 640
BstHHI GCGC 3 cut(s) 359, 596, 640
BstKTI GATC 8 cut(s) 128, 301, 1165, 1276, 1471, 1521, 1543, 1618
BstMAI GTCTC 2 cut(s) 1561, 1621
BstMBI GATC 8 cut(s) 125, 298, 1162, 1273, 1468, 1518, 1540, 1615
BstMCI CGRYCG 1 cut(s) 441
BstNI CCWGG 5 cut(s) 587, 739, 1473, 1481, 1649
BstSCI CCNGG 7 cut(s) 452, 453, 585, 737, 1471, 1479, 1647
BstSFI CTRYAG 1 cut(s) 217
BstUI CGCG 4 cut(s) 357, 404, 596, 640
BstV1I GCAGC 6 cut(s) 478, 481, 643, 868, 1285, 1651
BstV2I GAAGAC 1 cut(s) 188
BstX2I RGATCY 3 cut(s) 1273, 1540, 1615
BstXI CCANNNNNNTGG 1 cut(s) 838
BstYI RGATCY 3 cut(s) 1273, 1540, 1615
BstZI CGGCCG 1 cut(s) 438
Bsu36I CCTNAGG 1 cut(s) 559
BtgI CCRYGG 2 cut(s) 241, 1534
BtgZI GCGATG 1 cut(s) 1070
BtrI CACGTC 1 cut(s) 109
BtsCI GGATG 1 cut(s) 1348
Cac8I GCNNGC 7 cut(s) 46, 555, 778, 1050, 1173, 1303, 1531
CaiI CAGNNNCTG 1 cut(s) 1619
CciI TCATGA 1 cut(s) 1416
CfoI GCGC 3 cut(s) 359, 596, 640
Cfr10I RCCGGY 2 cut(s) 44, 700
Cfr13I GGNCC 6 cut(s) 286, 413, 426, 456, 538, 1138
Cfr9I CCCGGG 1 cut(s) 453
CseI GACGC 6 cut(s) 170, 182, 272, 410, 585, 1127
Csp6I GTAC 3 cut(s) 450, 865, 1222
CviAII CATG 3 cut(s) 487, 1417, 1466
CviQI GTAC 3 cut(s) 450, 865, 1222
DpnI GATC 8 cut(s) 127, 300, 1164, 1275, 1470, 1520, 1542, 1617
DpnII GATC 8 cut(s) 125, 298, 1162, 1273, 1468, 1518, 1540, 1615
DraI TTTAAA 1 cut(s) 762
EaeI YGGCCR 5 cut(s) 3, 250, 330, 438, 1698
EagI CGGCCG 1 cut(s) 438
Eam1104I CTCTTC 3 cut(s) 398, 737, 946
EarI CTCTTC 3 cut(s) 398, 737, 946
EciI GGCGGA 5 cut(s) 31, 118, 223, 334, 980
Ecl136II GAGCTC 1 cut(s) 193
EclXI CGGCCG 1 cut(s) 438
Eco130I CCWWGG 2 cut(s) 21, 831
Eco24I GRGCYC 2 cut(s) 195, 376
Eco47I GGWCC 3 cut(s) 413, 538, 1138
Eco52I CGGCCG 1 cut(s) 438
Eco53kI GAGCTC 1 cut(s) 193
Eco57I CTGAAG 1 cut(s) 1481
Eco81I CCTNAGG 1 cut(s) 559
Eco88I CYCGRG 5 cut(s) 290, 363, 409, 445, 453
EcoICRI GAGCTC 1 cut(s) 193
EcoNI CCTNNNNNAGG 1 cut(s) 320
EcoO109I RGGNCCY 3 cut(s) 286, 413, 1138
EcoRI GAATTC 1 cut(s) 1202
EcoRII CCWGG 5 cut(s) 585, 737, 1471, 1479, 1647
EcoT14I CCWWGG 2 cut(s) 21, 831
EcoT22I ATGCAT 1 cut(s) 920
EcoT38I GRGCYC 2 cut(s) 195, 376
ErhI CCWWGG 2 cut(s) 21, 831
FaeI CATG 3 cut(s) 490, 1420, 1469
FatI CATG 3 cut(s) 486, 1416, 1465
FauI CCCGC 2 cut(s) 362, 384
FokI GGATG 1 cut(s) 1355
FriOI GRGCYC 2 cut(s) 195, 376
FspBI CTAG 6 cut(s) 513, 996, 1142, 1172, 1530, 1715
GlaI GCGC 3 cut(s) 358, 595, 639
GsuI CTGGAG 1 cut(s) 569
HapII CCGG 8 cut(s) 45, 454, 473, 617, 689, 695, 701, 719
HgaI GACGC 6 cut(s) 170, 182, 272, 410, 585, 1127
HhaI GCGC 3 cut(s) 359, 596, 640
Hin1I GRCGYC 3 cut(s) 162, 174, 264
Hin1II CATG 3 cut(s) 490, 1420, 1469
Hin6I GCGC 3 cut(s) 357, 594, 638
HinP1I GCGC 3 cut(s) 357, 594, 638
HindIII AAGCTT 2 cut(s) 987, 1434
HinfI GANTC 5 cut(s) 337, 499, 874, 1250, 1264
HpaII CCGG 8 cut(s) 45, 454, 473, 617, 689, 695, 701, 719
HphI GGTGA 3 cut(s) 67, 970, 1705
Hpy166II GTNNAC 1 cut(s) 484
Hpy188III TCNNGA 9 cut(s) 292, 363, 481, 1066, 1417, 1451, 1670, 1708, 1735
Hpy8I GTNNAC 1 cut(s) 484
HpyCH4III ACNGT 2 cut(s) 187, 929
HpyCH4IV ACGT 2 cut(s) 108, 1445
HpyCH4V TGCA 7 cut(s) 466, 493, 553, 918, 1356, 1403, 1585
HpySE526I ACGT 2 cut(s) 108, 1445
Hsp92I GRCGYC 3 cut(s) 162, 174, 264
Hsp92II CATG 3 cut(s) 490, 1420, 1469
HspAI GCGC 3 cut(s) 357, 594, 638
KroI GCCGGC 1 cut(s) 44
KroNI GCCGGC 1 cut(s) 46
Kzo9I GATC 8 cut(s) 125, 298, 1162, 1273, 1468, 1518, 1540, 1615
LmnI GCTCC 5 cut(s) 100, 236, 588, 697, 1183
Lsp1109I GCAGC 6 cut(s) 478, 481, 643, 868, 1285, 1651
LweI GCATC 3 cut(s) 480, 1093, 1333
MaeI CTAG 6 cut(s) 513, 996, 1142, 1172, 1530, 1715
MaeII ACGT 2 cut(s) 108, 1445
MaeIII GTNAC 1 cut(s) 929
MalI GATC 8 cut(s) 127, 300, 1164, 1275, 1470, 1520, 1542, 1617
MboI GATC 8 cut(s) 125, 298, 1162, 1273, 1468, 1518, 1540, 1615
MboII GAAGA 9 cut(s) 193, 385, 682, 694, 754, 808, 866, 963, 1198
MflI RGATCY 3 cut(s) 1273, 1540, 1615
MhlI GDGCHC 3 cut(s) 195, 370, 376
MlsI TGGCCA 1 cut(s) 1700
MluCI AATT 5 cut(s) 1109, 1202, 1556, 1596, 1728
MluI ACGCGT 1 cut(s) 402
MluNI TGGCCA 1 cut(s) 1700
MlyI GAGTC 1 cut(s) 346
MmeI TCCRAC 5 cut(s) 144, 183, 195, 579, 609
Mox20I TGGCCA 1 cut(s) 1700
Mph1103I ATGCAT 1 cut(s) 920
MreI CGCCGGCG 1 cut(s) 44
MroNI GCCGGC 1 cut(s) 44
MroXI GAANNNNTTC 2 cut(s) 392, 803
MscI TGGCCA 1 cut(s) 1700
MseI TTAA 5 cut(s) 318, 761, 921, 972, 1740
Msp20I TGGCCA 1 cut(s) 1700
MspA1I CMGCKG 1 cut(s) 656
MspI CCGG 8 cut(s) 45, 454, 473, 617, 689, 695, 701, 719
MspR9I CCNGG 7 cut(s) 454, 455, 587, 739, 1473, 1481, 1649
Mva1269I GAATGC 2 cut(s) 920, 1587
MvaI CCWGG 5 cut(s) 587, 739, 1473, 1481, 1649
MvnI CGCG 4 cut(s) 357, 404, 596, 640
NaeI GCCGGC 1 cut(s) 46
NciI CCSGG 2 cut(s) 454, 455
NdeII GATC 8 cut(s) 125, 298, 1162, 1273, 1468, 1518, 1540, 1615
NgoMIV GCCGGC 1 cut(s) 44
NheI GCTAGC 2 cut(s) 1171, 1529
NlaIII CATG 3 cut(s) 490, 1420, 1469
NlaIV GGNNCC 6 cut(s) 232, 414, 693, 699, 705, 1275
NmeAIII GCCGAG 3 cut(s) 207, 228, 358
NmuCI GTSAC 1 cut(s) 929
NsiI ATGCAT 1 cut(s) 920
PaeR7I CTCGAG 1 cut(s) 290
PagI TCATGA 1 cut(s) 1416
PcsI WCGNNNNNNNCGW 4 cut(s) 168, 255, 264, 443
PctI GAATGC 2 cut(s) 920, 1587
PdiI GCCGGC 1 cut(s) 46
PdmI GAANNNNTTC 2 cut(s) 392, 803
PfeI GAWTC 4 cut(s) 499, 874, 1250, 1264
PflFI GACNNNGTC 1 cut(s) 206
PfoI TCCNGGA 1 cut(s) 1647
PleI GAGTC 1 cut(s) 345
PpsI GAGTC 1 cut(s) 345
PpuMI RGGWCCY 2 cut(s) 413, 1138
PsiI TTATAA 1 cut(s) 792
Psp124BI GAGCTC 1 cut(s) 195
Psp5II RGGWCCY 2 cut(s) 413, 1138
Psp6I CCWGG 5 cut(s) 585, 737, 1471, 1479, 1647
PspGI CCWGG 5 cut(s) 585, 737, 1471, 1479, 1647
PspN4I GGNNCC 6 cut(s) 232, 414, 693, 699, 705, 1275
PspPI GGNCC 6 cut(s) 286, 413, 426, 456, 538, 1138
PspPPI RGGWCCY 2 cut(s) 413, 1138
PstNI CAGNNNCTG 1 cut(s) 1619
PsuI RGATCY 3 cut(s) 1273, 1540, 1615
PsyI GACNNNGTC 1 cut(s) 206
RsaI GTAC 3 cut(s) 451, 866, 1223
RsaNI GTAC 3 cut(s) 450, 865, 1222
SacI GAGCTC 1 cut(s) 195
SaqAI TTAA 5 cut(s) 318, 761, 921, 972, 1740
Sau3AI GATC 8 cut(s) 125, 298, 1162, 1273, 1468, 1518, 1540, 1615
Sau96I GGNCC 6 cut(s) 286, 413, 426, 456, 538, 1138
SchI GAGTC 1 cut(s) 346
ScrFI CCNGG 7 cut(s) 454, 455, 587, 739, 1473, 1481, 1649
SduI GDGCHC 3 cut(s) 195, 370, 376
SfaNI GCATC 3 cut(s) 480, 1093, 1333
SfcI CTRYAG 1 cut(s) 217
Sfr274I CTCGAG 1 cut(s) 290
SgrAI CRCCGGYG 1 cut(s) 44
SinI GGWCC 3 cut(s) 413, 538, 1138
SlaI CTCGAG 1 cut(s) 290
SmaI CCCGGG 1 cut(s) 455
SmlI CTYRAG 2 cut(s) 194, 290
SmoI CTYRAG 2 cut(s) 194, 290
Sse9I AATT 5 cut(s) 1109, 1202, 1556, 1596, 1728
SspMI CTAG 6 cut(s) 513, 996, 1142, 1172, 1530, 1715
SstI GAGCTC 1 cut(s) 195
StyD4I CCNGG 7 cut(s) 452, 453, 585, 737, 1471, 1479, 1647
StyI CCWWGG 2 cut(s) 21, 831
TaaI ACNGT 2 cut(s) 187, 929
TaiI ACGT 2 cut(s) 111, 1448
TaqI TCGA 5 cut(s) 189, 258, 291, 807, 1034
TasI AATT 5 cut(s) 1109, 1202, 1556, 1596, 1728
TauI GCSGC 9 cut(s) 35, 62, 225, 314, 350, 382, 656, 667, 788
TfiI GAWTC 4 cut(s) 499, 874, 1250, 1264
Tru1I TTAA 5 cut(s) 318, 761, 921, 972, 1740
Tru9I TTAA 5 cut(s) 318, 761, 921, 972, 1740
TseFI GTSAC 1 cut(s) 929
TseI GCWGC 6 cut(s) 466, 469, 656, 881, 1298, 1664
Tsp45I GTSAC 1 cut(s) 929
TspDTI ATGAA 5 cut(s) 867, 927, 1215, 1405, 1569
TspGWI ACGGA 1 cut(s) 615
TspMI CCCGGG 1 cut(s) 453
Tth111I GACNNNGTC 1 cut(s) 206
VpaK11BI GGWCC 3 cut(s) 413, 538, 1138
XagI CCTNNNNNAGG 1 cut(s) 320
XapI RAATTY 2 cut(s) 1202, 1596
XhoI CTCGAG 1 cut(s) 290
XmaI CCCGGG 1 cut(s) 453
XmnI GAANNNNTTC 2 cut(s) 392, 803
XspI CTAG 6 cut(s) 513, 996, 1142, 1172, 1530, 1715
Zsp2I ATGCAT 1 cut(s) 920
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.