AT1G64190

Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
23825328 .. 23827136
1809 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G64190.1

Sequence Viewer

Length: 1464 bp
ATGGAGTCCGCCGCACTATCCCGAATCGGTCTCGCCGGACTCGCCGTGATGGGCCAAAACCTCGCCTTAAACATCGCCGAGAAAGGTTTCCCAATCTCAGTCTACAATCGAACCACTTCCAAAGTCGACGAAACCCTAGATCGAGCCGCCGTCGAAGGAAACCTCCCAGTCTCCGGCCAATACTCTCCCCGCGATTTCGTCCTCTCGATCCAACGGCCTAGATCTCTCATCATCCTCGTCAAAGCTGGAGCTCCCGTTGACCAAACAATCGACGCCTTCTCCGAATACATGGAGCCAGGAGATTGCATCATCGACGGTGGAAACGAATGGTATCAGAACACAGAGCGACGGATCTCCGAAGCTGAGCAAAAAGGATTGCTCTATTTAGGTATGGGAGTCTCCGGCGGCGAAGAAGGAGCTCGTAACGGTCCTTCGTTAATGCCTGGTGGATCATTTCAAGCTTATGATAACATCAAAGATATTTTGGAGAAAGTCGCAGCTCAAGTTGAAGATGGACCTTGTGTTACTTACATCGGAGAAGGTGGATCTGGAAATTTCGTGAAGATGGTTCATAATGGGATTGAGTATGGAGATATGCAATTGATCTCTGAAGCTTATGATGTGTTGAAGAACGTTGGTGGATTAAGCAACGAGGAGCTTGCTGAGATTTTCACTGAGTGGAATTCAGGTGAGCTTGAGAGTTTCTTGGTTGAGATAACTTCTGATATATTTAGGGTTAAGGATGAGTTTGGTGATGGAGAGTTAGTTGATAAGATTTTGGATAAGACTGGTATGAAAGGTACTGGGAAATGGACGGTGCAGCAAGCGGCGGAGCTGTCTGTTGCAGCTCCGACGATTGCTGCTTCGTTGGATTGTAGGTATTTGAGTGGGTTGAAAGATGAGAGGGAGAATGCAGCGAAAGTGTTGAGGGAAGCTGGATTGAAAGAAGAGATTGGTTCTGCGTCGAGTGGAATCGATAAGAAGAGATTGGTTGATGATGTTAGGCAAGCTTTGTATGCTTCCAAGATTTGTAGTTATGCTCAAGGGATGAATTTGCTTAGAGCTAAGAGTTTAGAGAAGAGTTGGAACTTGAATTTTGGTGAATTGGCTAGGATTTGGAAAGGTGGTTGTATTATAAGAGCGGTTTTCTTGGATAGGATCAAGAAAGCTTACCAGAGGAACCCGGACTTGGCTAGTCTTGTGGTTGATCCTGAGTTTGCTAAAGAGATGGTTCAGAGACAAGCTGCTTGGAGAAGAGTTGTTGGTTTGGCTGTTTCTGCTGGGATTAGCACGCCTGGAATGTGTGCTAGTCTTGCGTATTTCGATACTTATAGACGTGCTAGATTGCCGGCGAATCTGGTTCAGGCGCAGAGAGATCTCTTTGGAGCTCACACTTATGAGAGAACCGATCGTCCTGGTGCGTACCATACTGAATGGACTAAGCTTGCCAGGAAGAACCATTGA

Protein Analysis

487

Amino Acids

53.38

Weight (kDa)

5.34

Isoelectric Point (pI)

27.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_2 PF03446 8 - 179 1.3e-45 NAD binding domain of 6-phosphogluconate dehydrogenase
6PGD PF00393 184 - 479 5.5e-126 6-phosphogluconate dehydrogenase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1136
AccBSI CCGCTC 1 cut(s) 1142
AccI GTMKAC 2 cut(s) 102, 126
AccII CGCG 1 cut(s) 192
AciI CCGC 8 cut(s) 9, 12, 147, 190, 405, 827, 830, 1142
AclI AACGTT 1 cut(s) 633
AclWI GGATC 6 cut(s) 202, 359, 457, 553, 1166, 1202
AcoI YGGCCR 1 cut(s) 175
AcsI RAATTY 4 cut(s) 553, 682, 1051, 1093
AcuI CTGAAG 1 cut(s) 630
AcyI GRCGYC 1 cut(s) 273
AdeI CACNNNGTG 1 cut(s) 678
AfaI GTAC 2 cut(s) 802, 1424
AfiI CCNNNNNNNGG 2 cut(s) 173, 1189
AgsI TTSAA 6 cut(s) 458, 509, 628, 895, 943, 1093
AjiI CACGTC 1 cut(s) 1337
AjnI CCWGG 5 cut(s) 295, 442, 1294, 1414, 1448
AjuI GAANNNNNNNTTGG 2 cut(s) 1172, 1204
AloI GAACNNNNNNTCC 2 cut(s) 1396, 1428
Alw21I GWGCWC 3 cut(s) 253, 421, 1390
Alw26I GTCTC 4 cut(s) 35, 175, 403, 1231
AlwI GGATC 6 cut(s) 202, 359, 457, 553, 1166, 1202
AoxI GGCC 3 cut(s) 52, 175, 215
ApeKI GCWGC 6 cut(s) 497, 820, 845, 860, 914, 1244
ApoI RAATTY 4 cut(s) 553, 682, 1051, 1093
Asp700I GAANNNNTTC 2 cut(s) 86, 115
AspLEI GCGC 1 cut(s) 1369
AspS9I GGNCC 3 cut(s) 52, 428, 515
AsuC2I CCSGG 1 cut(s) 1184
AsuHPI GGTGA 3 cut(s) 701, 764, 1112
AvaII GGWCC 2 cut(s) 428, 515
BanII GRGCYC 3 cut(s) 253, 421, 1390
BarI GAAGNNNNNNTAC 2 cut(s) 415, 447
Bbv12I GWGCWC 3 cut(s) 253, 421, 1390
BbvI GCAGC 6 cut(s) 509, 832, 847, 857, 926, 1231
BccI CCATC 5 cut(s) 43, 506, 559, 749, 1222
BceAI ACGGC 3 cut(s) 29, 134, 230
BcgI CGANNNNNNTGC 2 cut(s) 641, 675
BciT130I CCWGG 5 cut(s) 297, 444, 1296, 1416, 1450
BcnI CCSGG 1 cut(s) 1184
BcoDI GTCTC 4 cut(s) 35, 175, 403, 1231
BfaI CTAG 6 cut(s) 137, 219, 1110, 1194, 1308, 1341
BglII AGATCT 2 cut(s) 221, 1375
BlpI GCTNAGC 1 cut(s) 363
Bme1390I CCNGG 6 cut(s) 297, 444, 1184, 1296, 1416, 1450
Bme18I GGWCC 2 cut(s) 428, 515
BmgBI CACGTC 1 cut(s) 1337
BmgT120I GGNCC 3 cut(s) 52, 428, 515
BmiI GGNNCC 2 cut(s) 294, 1181
BmrFI CCNGG 6 cut(s) 297, 444, 1184, 1296, 1416, 1450
BmrI ACTGGG 2 cut(s) 161, 813
BmsI GCATC 1 cut(s) 315
BmuI ACTGGG 2 cut(s) 161, 813
BpmI CTGGAG 1 cut(s) 267
Bpu1102I GCTNAGC 1 cut(s) 363
BpuEI CTTGAG 3 cut(s) 486, 716, 1026
BpuMI CCSGG 1 cut(s) 1184
Bsa29I ATCGAT 1 cut(s) 975
BsaHI GRCGYC 1 cut(s) 273
BsaI GGTCTC 1 cut(s) 35
BsaXI ACNNNNNCTCC 6 cut(s) 240, 263, 270, 293, 750, 780
Bsc4I CCNNNNNNNGG 2 cut(s) 173, 1189
Bse118I RCCGGY 1 cut(s) 1348
Bse1I ACTGG 3 cut(s) 167, 793, 808
BseBI CCWGG 5 cut(s) 297, 444, 1296, 1416, 1450
BseCI ATCGAT 1 cut(s) 975
BseGI GGATG 3 cut(s) 231, 748, 1053
BseLI CCNNNNNNNGG 2 cut(s) 173, 1189
BseMII CTCAG 5 cut(s) 111, 354, 654, 666, 1203
BseNI ACTGG 3 cut(s) 167, 793, 808
BseRI GAGGAG 1 cut(s) 668
BseXI GCAGC 6 cut(s) 509, 832, 847, 857, 926, 1231
BseYI CCCAGC 1 cut(s) 1280
BsgI GTGCAG 1 cut(s) 839
Bsh1236I CGCG 1 cut(s) 192
Bsh1285I CGRYCG 1 cut(s) 1411
BshFI GGCC 3 cut(s) 54, 177, 217
BshVI ATCGAT 1 cut(s) 975
BsiEI CGRYCG 1 cut(s) 1411
BsiHKAI GWGCWC 3 cut(s) 253, 421, 1390
BsiSI CCGG 5 cut(s) 36, 174, 402, 1184, 1349
BslI CCNNNNNNNGG 2 cut(s) 173, 1189
BsmAI GTCTC 4 cut(s) 35, 175, 403, 1231
BsmI GAATGC 1 cut(s) 916
BsnI GGCC 3 cut(s) 54, 177, 217
Bso31I GGTCTC 1 cut(s) 35
Bsp1286I GDGCHC 3 cut(s) 253, 421, 1390
Bsp1720I GCTNAGC 1 cut(s) 363
BspACI CCGC 8 cut(s) 9, 12, 147, 190, 405, 827, 830, 1142
BspANI GGCC 3 cut(s) 54, 177, 217
BspCNI CTCAG 5 cut(s) 110, 355, 655, 667, 1204
BspDI ATCGAT 1 cut(s) 975
BspFNI CGCG 1 cut(s) 192
BspLI GGNNCC 2 cut(s) 294, 1181
BspPI GGATC 6 cut(s) 202, 359, 457, 553, 1166, 1202
BspTNI GGTCTC 1 cut(s) 35
BsrBI CCGCTC 1 cut(s) 1142
BsrFI RCCGGY 1 cut(s) 1348
BsrI ACTGG 3 cut(s) 167, 793, 808
BssAI RCCGGY 1 cut(s) 1348
BssNI GRCGYC 1 cut(s) 273
Bst2UI CCWGG 5 cut(s) 297, 444, 1296, 1416, 1450
Bst4CI ACNGT 3 cut(s) 317, 428, 817
Bst6I CTCTTC 4 cut(s) 942, 977, 1073, 1249
BstACI GRCGYC 1 cut(s) 273
BstC8I GCNNGC 6 cut(s) 660, 825, 1008, 1292, 1350, 1446
BstDEI CTNAG 8 cut(s) 97, 363, 663, 675, 1058, 1065, 1212, 1440
BstF5I GGATG 3 cut(s) 231, 748, 1053
BstFNI CGCG 1 cut(s) 192
BstHHI GCGC 1 cut(s) 1369
BstMAI GTCTC 4 cut(s) 35, 175, 403, 1231
BstMCI CGRYCG 1 cut(s) 1411
BstMWI GCNNNNNNNGC 4 cut(s) 41, 1016, 1277, 1313
BstNI CCWGG 5 cut(s) 297, 444, 1296, 1416, 1450
BstSCI CCNGG 6 cut(s) 295, 442, 1182, 1294, 1414, 1448
BstUI CGCG 1 cut(s) 192
BstV1I GCAGC 6 cut(s) 509, 832, 847, 857, 926, 1231
BstX2I RGATCY 4 cut(s) 221, 351, 545, 1375
BstYI RGATCY 4 cut(s) 221, 351, 545, 1375
Bsu15I ATCGAT 1 cut(s) 975
BsuRI GGCC 3 cut(s) 54, 177, 217
BsuTUI ATCGAT 1 cut(s) 975
BtgZI GCGATG 1 cut(s) 58
BtrI CACGTC 1 cut(s) 1337
BtsCI GGATG 3 cut(s) 231, 748, 1053
BtsIMutI CAGTG 1 cut(s) 672
Cac8I GCNNGC 6 cut(s) 660, 825, 1008, 1292, 1350, 1446
CfoI GCGC 1 cut(s) 1369
Cfr10I RCCGGY 1 cut(s) 1348
Cfr13I GGNCC 3 cut(s) 52, 428, 515
ClaI ATCGAT 1 cut(s) 975
CseI GACGC 2 cut(s) 281, 951
Csp6I GTAC 2 cut(s) 801, 1423
CviAII CATG 1 cut(s) 289
CviQI GTAC 2 cut(s) 801, 1423
DdeI CTNAG 8 cut(s) 97, 363, 663, 675, 1058, 1065, 1212, 1440
DraIII CACNNNGTG 1 cut(s) 678
EaeI YGGCCR 1 cut(s) 175
Eam1104I CTCTTC 4 cut(s) 942, 977, 1073, 1249
EarI CTCTTC 4 cut(s) 942, 977, 1073, 1249
EciI GGCGGA 1 cut(s) 845
Ecl136II GAGCTC 3 cut(s) 251, 419, 1388
Eco24I GRGCYC 3 cut(s) 253, 421, 1390
Eco31I GGTCTC 1 cut(s) 35
Eco47I GGWCC 2 cut(s) 428, 515
Eco53kI GAGCTC 3 cut(s) 251, 419, 1388
Eco57I CTGAAG 1 cut(s) 630
EcoICRI GAGCTC 3 cut(s) 251, 419, 1388
EcoRI GAATTC 1 cut(s) 682
EcoRII CCWGG 5 cut(s) 295, 442, 1294, 1414, 1448
EcoT38I GRGCYC 3 cut(s) 253, 421, 1390
FaeI CATG 1 cut(s) 292
FatI CATG 1 cut(s) 288
FauI CCCGC 1 cut(s) 197
FblI GTMKAC 2 cut(s) 102, 126
FokI GGATG 3 cut(s) 218, 755, 1060
FriOI GRGCYC 3 cut(s) 253, 421, 1390
FspBI CTAG 6 cut(s) 137, 219, 1110, 1194, 1308, 1341
GlaI GCGC 1 cut(s) 1368
GsaI CCCAGC 1 cut(s) 1284
GsuI CTGGAG 1 cut(s) 267
HaeIII GGCC 3 cut(s) 54, 177, 217
HapII CCGG 5 cut(s) 36, 174, 402, 1184, 1349
HgaI GACGC 2 cut(s) 281, 951
HhaI GCGC 1 cut(s) 1369
Hin1I GRCGYC 1 cut(s) 273
Hin1II CATG 1 cut(s) 292
Hin6I GCGC 1 cut(s) 1367
HinP1I GCGC 1 cut(s) 1367
HincII GTYRAC 2 cut(s) 127, 259
HindII GTYRAC 2 cut(s) 127, 259
HindIII AAGCTT 5 cut(s) 459, 612, 1008, 1167, 1442
HinfI GANTC 6 cut(s) 5, 24, 39, 396, 972, 1354
HpaII CCGG 5 cut(s) 36, 174, 402, 1184, 1349
HphI GGTGA 3 cut(s) 701, 764, 1112
Hpy166II GTNNAC 3 cut(s) 103, 127, 259
Hpy188I TCNGA 8 cut(s) 283, 336, 358, 536, 610, 724, 852, 1236
Hpy188III TCNNGA 6 cut(s) 21, 205, 549, 559, 1162, 1211
Hpy8I GTNNAC 3 cut(s) 103, 127, 259
Hpy99I CGWCG 7 cut(s) 131, 155, 275, 317, 351, 856, 967
HpyAV CCTTC 5 cut(s) 149, 286, 407, 441, 533
HpyCH4III ACNGT 3 cut(s) 317, 428, 817
HpyCH4IV ACGT 2 cut(s) 633, 1336
HpyCH4V TGCA 5 cut(s) 306, 598, 820, 845, 914
HpyF10VI GCNNNNNNNGC 4 cut(s) 41, 1016, 1277, 1313
HpyF3I CTNAG 8 cut(s) 97, 363, 663, 675, 1058, 1065, 1212, 1440
HpySE526I ACGT 2 cut(s) 633, 1336
Hsp92I GRCGYC 1 cut(s) 273
Hsp92II CATG 1 cut(s) 292
HspAI GCGC 1 cut(s) 1367
KroI GCCGGC 1 cut(s) 1348
KroNI GCCGGC 1 cut(s) 1350
LmnI GCTCC 8 cut(s) 248, 256, 292, 416, 655, 832, 853, 1385
Lsp1109I GCAGC 6 cut(s) 509, 832, 847, 857, 926, 1231
LweI GCATC 1 cut(s) 315
MaeI CTAG 6 cut(s) 137, 219, 1110, 1194, 1308, 1341
MaeII ACGT 2 cut(s) 633, 1336
MaeIII GTNAC 2 cut(s) 422, 523
MbiI CCGCTC 1 cut(s) 1142
MboII GAAGA 8 cut(s) 422, 521, 574, 640, 959, 994, 1090, 1266
MfeI CAATTG 1 cut(s) 599
MflI RGATCY 4 cut(s) 221, 351, 545, 1375
MhlI GDGCHC 3 cut(s) 253, 421, 1390
MluCI AATT 6 cut(s) 553, 599, 682, 1051, 1093, 1103
MlyI GAGTC 3 cut(s) 14, 33, 405
MmeI TCCRAC 4 cut(s) 235, 849, 875, 1064
MnlI CCTC 8 cut(s) 71, 173, 212, 245, 646, 897, 921, 1170
MroNI GCCGGC 1 cut(s) 1348
MroXI GAANNNNTTC 2 cut(s) 86, 115
MseI TTAA 4 cut(s) 68, 437, 644, 738
MslI CAYNNNNRTG 1 cut(s) 1395
MspI CCGG 5 cut(s) 36, 174, 402, 1184, 1349
MspR9I CCNGG 6 cut(s) 297, 444, 1184, 1296, 1416, 1450
MunI CAATTG 1 cut(s) 599
Mva1269I GAATGC 1 cut(s) 916
MvaI CCWGG 5 cut(s) 297, 444, 1296, 1416, 1450
MvnI CGCG 1 cut(s) 192
MwoI GCNNNNNNNGC 4 cut(s) 41, 1016, 1277, 1313
NaeI GCCGGC 1 cut(s) 1350
NciI CCSGG 1 cut(s) 1184
NgoMIV GCCGGC 1 cut(s) 1348
NlaIII CATG 1 cut(s) 292
NlaIV GGNNCC 2 cut(s) 294, 1181
NmeAIII GCCGAG 1 cut(s) 103
PcsI WCGNNNNNNNCGW 2 cut(s) 279, 321
PctI GAATGC 1 cut(s) 916
PdiI GCCGGC 1 cut(s) 1350
PdmI GAANNNNTTC 2 cut(s) 86, 115
PfeI GAWTC 3 cut(s) 24, 972, 1354
Ple19I CGATCG 1 cut(s) 1411
PleI GAGTC 3 cut(s) 13, 33, 404
PpsI GAGTC 3 cut(s) 13, 33, 404
PsiI TTATAA 1 cut(s) 1136
Psp124BI GAGCTC 3 cut(s) 253, 421, 1390
Psp1406I AACGTT 1 cut(s) 633
Psp6I CCWGG 5 cut(s) 295, 442, 1294, 1414, 1448
PspFI CCCAGC 1 cut(s) 1280
PspGI CCWGG 5 cut(s) 295, 442, 1294, 1414, 1448
PspN4I GGNNCC 2 cut(s) 294, 1181
PspPI GGNCC 3 cut(s) 52, 428, 515
PsuI RGATCY 4 cut(s) 221, 351, 545, 1375
PvuI CGATCG 1 cut(s) 1411
RsaI GTAC 2 cut(s) 802, 1424
RsaNI GTAC 2 cut(s) 801, 1423
RseI CAYNNNNRTG 1 cut(s) 1395
SacI GAGCTC 3 cut(s) 253, 421, 1390
SalI GTCGAC 1 cut(s) 125
SaqAI TTAA 4 cut(s) 68, 437, 644, 738
Sau96I GGNCC 3 cut(s) 52, 428, 515
SchI GAGTC 3 cut(s) 14, 33, 405
ScrFI CCNGG 6 cut(s) 297, 444, 1184, 1296, 1416, 1450
SduI GDGCHC 3 cut(s) 253, 421, 1390
SfaNI GCATC 1 cut(s) 315
SinI GGWCC 2 cut(s) 428, 515
SmiMI CAYNNNNRTG 1 cut(s) 1395
SmlI CTYRAG 3 cut(s) 501, 695, 1041
SmoI CTYRAG 3 cut(s) 501, 695, 1041
Sse9I AATT 6 cut(s) 553, 599, 682, 1051, 1093, 1103
SsiI CCGC 8 cut(s) 9, 12, 147, 190, 405, 827, 830, 1142
SspMI CTAG 6 cut(s) 137, 219, 1110, 1194, 1308, 1341
SstI GAGCTC 3 cut(s) 253, 421, 1390
StyD4I CCNGG 6 cut(s) 295, 442, 1182, 1294, 1414, 1448
TaaI ACNGT 3 cut(s) 317, 428, 817
TaiI ACGT 2 cut(s) 636, 1339
TaqII GACCGA 1 cut(s) 17
TasI AATT 6 cut(s) 553, 599, 682, 1051, 1093, 1103
TauI GCSGC 4 cut(s) 14, 149, 408, 830
TfiI GAWTC 3 cut(s) 24, 972, 1354
Tru1I TTAA 4 cut(s) 68, 437, 644, 738
Tru9I TTAA 4 cut(s) 68, 437, 644, 738
TscAI CASTG 1 cut(s) 679
TseI GCWGC 6 cut(s) 497, 820, 845, 860, 914, 1244
TspDTI ATGAA 3 cut(s) 560, 809, 1064
TspGWI ACGGA 1 cut(s) 364
TspRI CASTG 1 cut(s) 679
VpaK11BI GGWCC 2 cut(s) 428, 515
XapI RAATTY 4 cut(s) 553, 682, 1051, 1093
XmiI GTMKAC 2 cut(s) 102, 126
XmnI GAANNNNTTC 2 cut(s) 86, 115
XspI CTAG 6 cut(s) 137, 219, 1110, 1194, 1308, 1341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.