Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008259

Physical Location & Seq

Genomic Coordinates Forward (+)

13682467 .. 13684545

Gene Structure 2079 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17515

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGGAGGCTTCCCCTGCTCTCTCCCGCATCGGCCTGGCCGGCCTGGCCGTCATGGGCCAGAACCTCGCCCTCAACATCGCCGAGAAAGGCTTCCCCATCTCCGTCTACAACCGCACCACCTCCAAGGTCGACGAGACCGTCGATCGCGCCGTGAACGAAGGCAACCTCCCTCTCTCCGGCCAGTACACCCCCAAAGACTTCGTCCTCTCCCTCCAGCGCCCCAGATCCGTCATCATTCTCGTCAAGGCCGGCGCCCCCGTCGACCAGACCATCGCCGCCCTGTCCGCCTACATGGAGCCCGGCGACGCCATCATCGACGGCGGCAACGAGTGGTACGAGAACACCGAGCGCCGCATCCACGAGGCCTCCGCCAAGGGCCTCCTCTACCTCGGCATGGGAGTCTCCGGCGGCGAGGAGGGCGCCCGCCACGGCCCCAGTCTCATGCCCGGCGGGTCCCACCAGGCGTACTCCAACGTCCAGGATATTCTCCACAAGGTCGCCGCCCAGGTGGAGGACGGGCCGTGCGTGACGTACATCGGCCAAGGCGGGTCCGGTAACTTCGTCAAGATGGTCCACAACGGAATCGAGTACGGCGATATGCAGCTGATTTCCGAGGCCTACGACGTCTTCTTGGTTGAGATTACCGCCGATATTTTCAAGGTGAAAGACGATTTGGCCGATGGGTTTTTGGTGGATAAGTTGCTGGACAAGACGGGGATGAAGGGCACCGGGAAATGGACGGTTCAGCAGGCTGCTGAGCTTTCCGTGGCGGCCCCGACTATTGCGGCGTCGTTGGATTGTAGATACTTGAGTGGATTGAAGGAGGAGAGGGAGAGCGCCGAGGAGGCCTTGAAGCAGGCCGGGTTCAAGGAGGAGATTGGGAATGTGACTAGTGGGATTGATAAGAAGAGGTTGATTGATGATGTGAGGCAGGCTTTGTATGCTTCCAAGATTTGTAGCTATGCTCAGGGGATGAACTTGTTGAGGGCTAAGAGTATGGAGAAGGGTTGGAATTTGAATTTGGGGGAATTGGCTAGGATTTGGAAGGGTGGGTGTATTATTAGGGCCGTGTTCTTGGACAGGATTAAGAATGCGTATCAGAGGAATCAGGGTTTACCTAACTTGGTTGTTGATCCCGACTTTGCTAAGGAAATGGTGCAGAGGCAAGCTGCGTGGAGGAGAGTTGTAGGGTTGGCTGTGGCCGCCGGGATTAGTACTCCGGGAATGTGTGCTAGTTTGTCGTACTTTGATACATACAGGCGTGCTAGGCTTCCGGCTAATCTTGTTCAGGCTCAAAGAGACTTGTTTGGAGCGCATACTTATGAGAGGGTTGATCGCCCTGGCTCATTTCATACAGAGTGGACTAAACTTGCTCAAAAGAGTTCGGGTGTTGGGGTTCTCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005911 GO:0006081 GO:0006098 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006739 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008114 GO:0008150 GO:0008152 GO:0009051 GO:0009117 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016491 GO:0016614 GO:0016616 GO:0019362 GO:0019637 GO:0019682 GO:0019693 GO:0030054 GO:0033993 GO:0034284 GO:0034285 GO:0034641 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046496 GO:0046686 GO:0050896 GO:0051156 GO:0051186 GO:0055044 GO:0055086 GO:0055114 GO:0071704 GO:0072524 GO:0097305 GO:1901135 GO:1901360 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00030 ko00480 ko01100 ko01110 ko01120 ko01130 ko01200 map00030 map00480 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

6PGD NAD_binding_2

Protein Analysis

468

Amino Acids

50.83

Weight (kDa)

6.43

Isoelectric Point (pI)

25.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_2	PF03446	9 - 180	2e-46	NAD binding domain of 6-phosphogluconate dehydrogenase
6PGD	PF00393	185 - 209	8.8e-11	6-phosphogluconate dehydrogenase, C-terminal domain
6PGD	PF00393	209 - 454	3.1e-94	6-phosphogluconate dehydrogenase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008259)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64190 AT5G41670 AT5G41670 AT5G41670 AT5G41670
fragaria_vesca	FvH4_4g04820
malus_domestica	MD06G1098700.v1.1 MD14G1117900.v1.1
prunus_persica	Prupe.5G112300_v2.0.a1 Prupe.5G112300_v2.0.a1
pyrus_communis	pycom06g09400
rosa_chinensis	RchiOBHm_Chr7g0195821
rosa_laevigata	RLG00000004086
rosa_multiflora	Rmu_sc0002445.1_g000011
rosa_roxburghii	Rroxscaffold_3G00260070 Rroxscaffold_4G00304940
rosa_rugosa	Rorug07G0026400
rosa_samantha	Rh1DG221600 Rh7AG154400 Rh7BG156200 Rh7CG159900 Rh7DG155500
rosa_wichuraiana	Rw7G013190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	137
AatII	GACGTC	1 cut(s)	627
AccB1I	GGYRCC	3 cut(s)	251, 419, 725
AccI	GTMKAC	3 cut(s)	105, 129, 261
AccII	CGCG	1 cut(s)	147
AclWI	GGATC	2 cut(s)	219, 1127
AcoI	YGGCCR	6 cut(s)	36, 45, 178, 538, 675, 1200
AcsI	RAATTY	2 cut(s)	1012, 1018
AcyI	GRCGYC	5 cut(s)	252, 306, 420, 624, 788
AfaI	GTAC	7 cut(s)	185, 335, 467, 533, 590, 1216, 1244
AfiI	CCNNNNNNNGG	4 cut(s)	176, 394, 511, 735
AgsI	TTSAA	5 cut(s)	658, 820, 853, 868, 1018
AhlI	ACTAGT	1 cut(s)	890
AjnI	CCWGG	6 cut(s)	33, 42, 459, 477, 504, 1339
AjuI	GAANNNNNNNTTGG	4 cut(s)	656, 688, 1004, 1036
AluBI	AGCT	4 cut(s)	604, 760, 960, 1169
AluI	AGCT	4 cut(s)	604, 760, 960, 1169
Alw26I	GTCTC	4 cut(s)	128, 406, 443, 1293
AlwI	GGATC	2 cut(s)	219, 1127
ApeKI	GCWGC	3 cut(s)	601, 752, 1169
ApoI	RAATTY	2 cut(s)	1012, 1018
ArsI	GACNNNNNNTTYG	2 cut(s)	186, 218
Asp700I	GAANNNNTTC	1 cut(s)	89
AspLEI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 839, 1315
AspS9I	GGNCC	9 cut(s)	55, 376, 431, 453, 518, 549, 571, 772, 1065
AsuC2I	CCSGG	6 cut(s)	300, 447, 730, 862, 1207, 1221
AsuHPI	GGTGA	1 cut(s)	673
AvaII	GGWCC	3 cut(s)	453, 549, 571
BaeGI	GKGCMC	1 cut(s)	728
BaeI	ACNNNNGTAYC	2 cut(s)	796, 829
BanI	GGYRCC	3 cut(s)	251, 419, 725
BanII	GRGCYC	1 cut(s)	300
BauI	CACGAG	1 cut(s)	359
BbsI	GAAGAC	1 cut(s)	619
BbvI	GCAGC	3 cut(s)	613, 739, 1156
BccI	CCATC	5 cut(s)	104, 278, 317, 562, 674
BceAI	ACGGC	7 cut(s)	32, 134, 334, 445, 505, 607, 1052
BciT130I	CCWGG	6 cut(s)	35, 44, 461, 479, 506, 1341
BcnI	CCSGG	6 cut(s)	300, 447, 730, 862, 1207, 1221
BcoDI	GTCTC	4 cut(s)	128, 406, 443, 1293
BcuI	ACTAGT	1 cut(s)	890
BfaI	CTAG	4 cut(s)	891, 1035, 1233, 1266
BfoI	RGCGCY	5 cut(s)	220, 255, 352, 423, 840
BglI	GCCNNNNNGGC	3 cut(s)	39, 44, 845
BlpI	GCTNAGC	1 cut(s)	756
BmcAI	AGTACT	1 cut(s)	1216
Bme18I	GGWCC	3 cut(s)	453, 549, 571
BmgT120I	GGNCC	9 cut(s)	55, 376, 431, 453, 518, 549, 571, 772, 1065
BmiI	GGNNCC	9 cut(s)	253, 297, 421, 433, 454, 455, 550, 727, 774
BmrI	ACTGGG	1 cut(s)	429
BmsI	GCATC	2 cut(s)	36, 363
BmuI	ACTGGG	1 cut(s)	429
BpiI	GAAGAC	1 cut(s)	619
BpmI	CTGGAG	1 cut(s)	197
Bpu10I	CCTNAGC	2 cut(s)	966, 1146
Bpu1102I	GCTNAGC	1 cut(s)	756
BpuEI	CTTGAG	1 cut(s)	829
BpuMI	CCSGG	6 cut(s)	300, 447, 730, 862, 1207, 1221
BsaHI	GRCGYC	5 cut(s)	252, 306, 420, 624, 788
BsaI	GGTCTC	1 cut(s)	128
BsaWI	WCCGGW	1 cut(s)	551
BsaXI	ACNNNNNCTCC	2 cut(s)	350, 380
Bsc4I	CCNNNNNNNGG	4 cut(s)	176, 394, 511, 735
Bse118I	RCCGGY	2 cut(s)	38, 248
Bse1I	ACTGG	2 cut(s)	181, 435
BseBI	CCWGG	6 cut(s)	35, 44, 461, 479, 506, 1341
BseGI	GGATG	3 cut(s)	354, 723, 978
BseLI	CCNNNNNNNGG	4 cut(s)	176, 394, 511, 735
BseMII	CTCAG	2 cut(s)	747, 980
BseNI	ACTGG	2 cut(s)	181, 435
BseRI	GAGGAG	6 cut(s)	371, 428, 839, 857, 887, 1192
BseSI	GKGCMC	1 cut(s)	728
BseXI	GCAGC	3 cut(s)	613, 739, 1156
BsgI	GTGCAG	1 cut(s)	1178
Bsh1236I	CGCG	1 cut(s)	147
Bsh1285I	CGRYCG	1 cut(s)	145
BshNI	GGYRCC	3 cut(s)	251, 419, 725
BsiEI	CGRYCG	1 cut(s)	145
BslFI	GGGAC	1 cut(s)	439
BslI	CCNNNNNNNGG	4 cut(s)	176, 394, 511, 735
BsmAI	GTCTC	4 cut(s)	128, 406, 443, 1293
BsmFI	GGGAC	1 cut(s)	439
BsmI	GAATGC	1 cut(s)	1096
Bso31I	GGTCTC	1 cut(s)	128
Bsp1286I	GDGCHC	2 cut(s)	300, 728
Bsp143I	GATC	4 cut(s)	142, 224, 1132, 1333
Bsp1720I	GCTNAGC	1 cut(s)	756
BspCNI	CTCAG	2 cut(s)	748, 979
BspFNI	CGCG	1 cut(s)	147
BspLI	GGNNCC	9 cut(s)	253, 297, 421, 433, 454, 455, 550, 727, 774
BspPI	GGATC	2 cut(s)	219, 1127
BspT107I	GGYRCC	3 cut(s)	251, 419, 725
BspTNI	GGTCTC	1 cut(s)	128
BsrFI	RCCGGY	2 cut(s)	38, 248
BsrI	ACTGG	2 cut(s)	181, 435
BssAI	RCCGGY	2 cut(s)	38, 248
BssMI	GATC	4 cut(s)	142, 224, 1132, 1333
BssNI	GRCGYC	5 cut(s)	252, 306, 420, 624, 788
BssSI	CACGAG	1 cut(s)	359
BssT1I	CCWWGG	3 cut(s)	123, 372, 541
Bst2BI	CACGAG	1 cut(s)	359
Bst2UI	CCWGG	6 cut(s)	35, 44, 461, 479, 506, 1341
Bst4CI	ACNGT	2 cut(s)	139, 742
Bst6I	CTCTTC	1 cut(s)	902
BstACI	GRCGYC	5 cut(s)	252, 306, 420, 624, 788
BstC8I	GCNNGC	8 cut(s)	40, 250, 424, 750, 858, 933, 1167, 1263
BstDEI	CTNAG	4 cut(s)	756, 966, 990, 1146
BstDSI	CCRYGG	2 cut(s)	427, 765
BstF5I	GGATG	3 cut(s)	354, 723, 978
BstFNI	CGCG	1 cut(s)	147
BstH2I	RGCGCY	5 cut(s)	220, 255, 352, 423, 840
BstHHI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 839, 1315
BstKTI	GATC	4 cut(s)	145, 227, 1135, 1336
BstMAI	GTCTC	4 cut(s)	128, 406, 443, 1293
BstMBI	GATC	4 cut(s)	142, 224, 1132, 1333
BstMCI	CGRYCG	1 cut(s)	145
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 39, 44, 284, 417, 845, 941, 1202, 1267
BstNI	CCWGG	6 cut(s)	35, 44, 461, 479, 506, 1341
BstSLI	GKGCMC	1 cut(s)	728
BstUI	CGCG	1 cut(s)	147
BstV1I	GCAGC	3 cut(s)	613, 739, 1156
BstV2I	GAAGAC	1 cut(s)	619
BstX2I	RGATCY	1 cut(s)	224
BstYI	RGATCY	1 cut(s)	224
BtgI	CCRYGG	2 cut(s)	427, 765
BtgZI	GCGATG	2 cut(s)	61, 256
BtsCI	GGATG	3 cut(s)	354, 723, 978
Cac8I	GCNNGC	8 cut(s)	40, 250, 424, 750, 858, 933, 1167, 1263
CfoI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 839, 1315
Cfr10I	RCCGGY	2 cut(s)	38, 248
Cfr13I	GGNCC	9 cut(s)	55, 376, 431, 453, 518, 549, 571, 772, 1065
CseI	GACGC	2 cut(s)	314, 777
Csp6I	GTAC	7 cut(s)	184, 334, 466, 532, 589, 1215, 1243
CspCI	CAANNNNNGTGG	2 cut(s)	1154, 1189
CviAII	CATG	4 cut(s)	52, 292, 394, 442
CviQI	GTAC	7 cut(s)	184, 334, 466, 532, 589, 1215, 1243
DdeI	CTNAG	4 cut(s)	756, 966, 990, 1146
DinI	GGCGCC	2 cut(s)	253, 421
DpnI	GATC	4 cut(s)	144, 226, 1134, 1335
DpnII	GATC	4 cut(s)	142, 224, 1132, 1333
DrdI	GACNNNNNNGTC	1 cut(s)	137
DseDI	GACNNNNNNGTC	1 cut(s)	137
EaeI	YGGCCR	6 cut(s)	36, 45, 178, 538, 675, 1200
Eam1104I	CTCTTC	1 cut(s)	902
EarI	CTCTTC	1 cut(s)	902
EciI	GGCGGA	2 cut(s)	274, 358
Eco130I	CCWWGG	3 cut(s)	123, 372, 541
Eco147I	AGGCCT	3 cut(s)	365, 617, 848
Eco24I	GRGCYC	1 cut(s)	300
Eco31I	GGTCTC	1 cut(s)	128
Eco47I	GGWCC	3 cut(s)	453, 549, 571
EcoO109I	RGGNCCY	2 cut(s)	376, 453
EcoRII	CCWGG	6 cut(s)	33, 42, 459, 477, 504, 1339
EcoT14I	CCWWGG	3 cut(s)	123, 372, 541
EcoT38I	GRGCYC	1 cut(s)	300
EgeI	GGCGCC	2 cut(s)	253, 421
EheI	GGCGCC	2 cut(s)	253, 421
ErhI	CCWWGG	3 cut(s)	123, 372, 541
FaeI	CATG	4 cut(s)	55, 295, 397, 445
FaqI	GGGAC	1 cut(s)	439
FatI	CATG	4 cut(s)	51, 291, 393, 441
FauI	CCCGC	4 cut(s)	32, 431, 443, 539
FblI	GTMKAC	3 cut(s)	105, 129, 261
FokI	GGATG	3 cut(s)	341, 730, 985
FriOI	GRGCYC	1 cut(s)	300
FseI	GGCCGGCC	1 cut(s)	42
FspBI	CTAG	4 cut(s)	891, 1035, 1233, 1266
GlaI	GCGC	7 cut(s)	148, 218, 253, 350, 421, 838, 1314
GsuI	CTGGAG	1 cut(s)	197
HaeII	RGCGCY	5 cut(s)	220, 255, 352, 423, 840
HgaI	GACGC	2 cut(s)	314, 777
HhaI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 839, 1315
Hin1I	GRCGYC	5 cut(s)	252, 306, 420, 624, 788
Hin1II	CATG	4 cut(s)	55, 295, 397, 445
Hin6I	GCGC	7 cut(s)	147, 217, 252, 349, 420, 837, 1313
HinP1I	GCGC	7 cut(s)	147, 217, 252, 349, 420, 837, 1313
HincII	GTYRAC	2 cut(s)	130, 262
HindII	GTYRAC	2 cut(s)	130, 262
HinfI	GANTC	3 cut(s)	399, 582, 1105
HphI	GGTGA	1 cut(s)	673
Hpy166II	GTNNAC	8 cut(s)	106, 130, 154, 186, 262, 574, 1115, 1362
Hpy188I	TCNGA	2 cut(s)	613, 1101
Hpy188III	TCNNGA	2 cut(s)	565, 1136
Hpy8I	GTNNAC	8 cut(s)	106, 130, 154, 186, 262, 574, 1115, 1362
Hpy99I	CGWCG	7 cut(s)	134, 143, 263, 308, 320, 626, 793
HpyAV	CCTTC	5 cut(s)	152, 715, 814, 997, 1039
HpyCH4III	ACNGT	2 cut(s)	139, 742
HpyCH4IV	ACGT	3 cut(s)	474, 530, 624
HpyCH4V	TGCA	2 cut(s)	601, 1159
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 39, 44, 284, 417, 845, 941, 1202, 1267
HpyF3I	CTNAG	4 cut(s)	756, 966, 990, 1146
HpySE526I	ACGT	3 cut(s)	474, 530, 624
Hsp92I	GRCGYC	5 cut(s)	252, 306, 420, 624, 788
Hsp92II	CATG	4 cut(s)	55, 295, 397, 445
HspAI	GCGC	7 cut(s)	147, 217, 252, 349, 420, 837, 1313
KasI	GGCGCC	2 cut(s)	251, 419
KflI	GGGWCCC	1 cut(s)	453
KroI	GCCGGC	2 cut(s)	38, 248
KroNI	GCCGGC	2 cut(s)	40, 250
Kzo9I	GATC	4 cut(s)	142, 224, 1132, 1333
LmnI	GCTCC	2 cut(s)	295, 1310
Lsp1109I	GCAGC	3 cut(s)	613, 739, 1156
LweI	GCATC	2 cut(s)	36, 363
MaeI	CTAG	4 cut(s)	891, 1035, 1233, 1266
MaeII	ACGT	3 cut(s)	474, 530, 624
MaeIII	GTNAC	3 cut(s)	526, 554, 886
MalI	GATC	4 cut(s)	144, 226, 1134, 1335
MboI	GATC	4 cut(s)	142, 224, 1132, 1333
MboII	GAAGA	2 cut(s)	619, 919
MfeI	CAATTG	1 cut(s)	1402
MflI	RGATCY	1 cut(s)	224
MhlI	GDGCHC	2 cut(s)	300, 728
MluCI	AATT	4 cut(s)	1012, 1018, 1028, 1402
Mly113I	GGCGCC	2 cut(s)	252, 420
MlyI	GAGTC	1 cut(s)	408
MmeI	TCCRAC	3 cut(s)	495, 774, 989
MroNI	GCCGGC	2 cut(s)	38, 248
MroXI	GAANNNNTTC	1 cut(s)	89
MseI	TTAA	1 cut(s)	1086
MslI	CAYNNNNRTG	1 cut(s)	1320
MspA1I	CMGCKG	1 cut(s)	604
MunI	CAATTG	1 cut(s)	1402
Mva1269I	GAATGC	1 cut(s)	1096
MvaI	CCWGG	6 cut(s)	35, 44, 461, 479, 506, 1341
MvnI	CGCG	1 cut(s)	147
MwoI	GCNNNNNNNGC	9 cut(s)	14, 39, 44, 284, 417, 845, 941, 1202, 1267
NaeI	GCCGGC	2 cut(s)	40, 250
NarI	GGCGCC	2 cut(s)	252, 420
NciI	CCSGG	6 cut(s)	300, 447, 730, 862, 1207, 1221
NdeII	GATC	4 cut(s)	142, 224, 1132, 1333
NgoMIV	GCCGGC	2 cut(s)	38, 248
NlaIII	CATG	4 cut(s)	55, 295, 397, 445
NlaIV	GGNNCC	9 cut(s)	253, 297, 421, 433, 454, 455, 550, 727, 774
NmeAIII	GCCGAG	3 cut(s)	106, 369, 865
NmuCI	GTSAC	2 cut(s)	526, 886
PceI	AGGCCT	3 cut(s)	365, 617, 848
PctI	GAATGC	1 cut(s)	1096
PdiI	GCCGGC	2 cut(s)	40, 250
PdmI	GAANNNNTTC	1 cut(s)	89
PfeI	GAWTC	2 cut(s)	582, 1105
PflFI	GACNNNGTC	1 cut(s)	200
PfoI	TCCNGGA	2 cut(s)	477, 1219
Ple19I	CGATCG	1 cut(s)	145
PleI	GAGTC	1 cut(s)	407
PluTI	GGCGCC	2 cut(s)	255, 423
PpsI	GAGTC	1 cut(s)	407
PpuMI	RGGWCCY	1 cut(s)	453
Psp5II	RGGWCCY	1 cut(s)	453
Psp6I	CCWGG	6 cut(s)	33, 42, 459, 477, 504, 1339
PspGI	CCWGG	6 cut(s)	33, 42, 459, 477, 504, 1339
PspN4I	GGNNCC	9 cut(s)	253, 297, 421, 433, 454, 455, 550, 727, 774
PspPI	GGNCC	9 cut(s)	55, 376, 431, 453, 518, 549, 571, 772, 1065
PspPPI	RGGWCCY	1 cut(s)	453
PsuI	RGATCY	1 cut(s)	224
PsyI	GACNNNGTC	1 cut(s)	200
PvuI	CGATCG	1 cut(s)	145
PvuII	CAGCTG	1 cut(s)	604
RigI	GGCCGGCC	1 cut(s)	42
RsaI	GTAC	7 cut(s)	185, 335, 467, 533, 590, 1216, 1244
RsaNI	GTAC	7 cut(s)	184, 334, 466, 532, 589, 1215, 1243
RseI	CAYNNNNRTG	1 cut(s)	1320
SalI	GTCGAC	2 cut(s)	128, 260
SaqAI	TTAA	1 cut(s)	1086
Sau3AI	GATC	4 cut(s)	142, 224, 1132, 1333
Sau96I	GGNCC	9 cut(s)	55, 376, 431, 453, 518, 549, 571, 772, 1065
ScaI	AGTACT	1 cut(s)	1216
SchI	GAGTC	1 cut(s)	408
SduI	GDGCHC	2 cut(s)	300, 728
SfaNI	GCATC	2 cut(s)	36, 363
SfiI	GGCCNNNNNGGCC	2 cut(s)	39, 44
SfoI	GGCGCC	2 cut(s)	253, 421
SinI	GGWCC	3 cut(s)	453, 549, 571
SmiMI	CAYNNNNRTG	1 cut(s)	1320
SmlI	CTYRAG	1 cut(s)	808
SmoI	CTYRAG	1 cut(s)	808
SpeI	ACTAGT	1 cut(s)	890
Sse9I	AATT	4 cut(s)	1012, 1018, 1028, 1402
SseBI	AGGCCT	3 cut(s)	365, 617, 848
SspDI	GGCGCC	2 cut(s)	251, 419
SspMI	CTAG	4 cut(s)	891, 1035, 1233, 1266
StuI	AGGCCT	3 cut(s)	365, 617, 848
StyI	CCWWGG	3 cut(s)	123, 372, 541
TaaI	ACNGT	2 cut(s)	139, 742
TaiI	ACGT	3 cut(s)	477, 533, 627
TaqI	TCGA	5 cut(s)	129, 141, 261, 315, 585
TasI	AATT	4 cut(s)	1012, 1018, 1028, 1402
TatI	WGTACW	2 cut(s)	183, 1214
TauI	GCSGC	8 cut(s)	278, 324, 354, 411, 503, 773, 788, 1205
TfiI	GAWTC	2 cut(s)	582, 1105
Tru1I	TTAA	1 cut(s)	1086
Tru9I	TTAA	1 cut(s)	1086
TseFI	GTSAC	2 cut(s)	526, 886
TseI	GCWGC	3 cut(s)	601, 752, 1169
Tsp45I	GTSAC	2 cut(s)	526, 886
TspDTI	ATGAA	3 cut(s)	734, 989, 1340
TspGWI	ACGGA	4 cut(s)	91, 217, 594, 754
Tth111I	GACNNNGTC	1 cut(s)	200
VpaK11BI	GGWCC	3 cut(s)	453, 549, 571
XapI	RAATTY	2 cut(s)	1012, 1018
XmiI	GTMKAC	3 cut(s)	105, 129, 261
XmnI	GAANNNNTTC	1 cut(s)	89
XspI	CTAG	4 cut(s)	891, 1035, 1233, 1266
ZraI	GACGTC	1 cut(s)	625
ZrmI	AGTACT	1 cut(s)	1216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.