Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008259

Physical Location & Seq

Genomic Coordinates Reverse (-)

56040117 .. 56041601

Gene Structure 1485 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004086

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGGAGGCTTCCCCTGCTCTCTCCCGCATCGGCCTCGCTGGCCTGGCCGTCATGGGCCAGAACCTCGCCCTCAACATCGCCGAGAAAGGCTTCCCCATCTCCGTCTACAACCGCACCACCTCCAAGGTCGACGAGACCGTCGATCGCGCCGTGAACGAAGGCAACCTCCCTCTCTCCGGTCAGTACACCCCCAAAGACTTCGTCCTCTCCCTCCAGCGCCCCAGATCCGTCATCATTCTCGTCAAGGCCGGCGCCCCCGTCGACCAGACCATCGCCGCCCTGTCCGCGTACATGGAGCCCGGCGACGCCATCATCGACGGCGGCAACGAGTGGTACGAGAACACCGAGCGCCGCATCCACGAGGCCTCCGCCAAGGGCCTCCTCTACCTCGGCATGGGAGTCTCCGGCGGCGAGGAGGGCGCCCGCCACGGCCCGAGTCTCATGCCCGGCGGGTCCCACCAGGCGTACTCCAACGTCCAGGATATTCTCCACAAGGTCGCCGCGCAGGTGGAGGACGGGCCGTGCGTGACGTACATCGGCCAAGGCGGGTCGGGTAACTTCGTCAAGATGGTCCACAACGGAATCGAGTACGGCGATATGCAGCTGATTTCCGAGGCCTACGACGTGTTGAAGAACATCGGCGGGCTTTCGAATTCGGAGCTGGCTGAAATCTTTGACGAGTGGAACAGAGGGGAGCTGGAGAGCTTCTTGGTTGAGATTACCGCCGATATTTTCAAGGTGAAAGACGATTTGGCGGATGGGTTTTTGGTGGATAAGTTGCTCGACAAGACGGGGATGAAGGGCACCGGGAAATGGACGGTTCAGCAGGCTGCTGAGCTGTCCGTGGCGGCTCCCACTATTGCCGCGTCGTTGGATTGTAGATACTTGAGTGGATTGAAGGAGGAGAGGGAGAGCGCCGAGGAGGCTTTGAAGCAAGCCGGGTTCAAGGAGGAGATTGGGAATGTGACTAGTGGGATTGATAAGAAGAGGTTGATTGATGATGTGAGGCAGGCTTTGTATGCTTCCAAGATTTGTAGCTATGCTCAGGGGATGAACTTGTTGAGGGCTAAGAGTATGGAGAAGGGTTGGAATTTGAATTTGGGGGAATTGGCTAGGATTTGGAAGGGTGGGTGTATTATTAGAGCCGTGTTCTTGGATAGGATTAAGAATGCGTATCAGAGGAATCAGGGTTTGCCTAACTTGGTTGTTGATCCCGACTTTGCTAAGGAAATGGTCCAGAGGCAAGCTGCGTGGAGGAGAGTTGTGGGGTTGGCTGTGGCAGCCGGGATTAGTACTCCCGGAATGTGTGCTAGTTTGTCGTACTTTGATACATATAGGCGTGCTAGGCTTCCGGCTAATCTTGTTCAGGCTCAAAGAGACTTGTTTGGAGCTCATACTTATGAGAGGGTTGATCGCCCTGGCTCATTTCATACAGAGTGGACGAAACTTGCTCAAAAGAGTTCGGGTGTTGGGGTTCTCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005911 GO:0006081 GO:0006098 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006739 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008114 GO:0008150 GO:0008152 GO:0009051 GO:0009117 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016491 GO:0016614 GO:0016616 GO:0019362 GO:0019637 GO:0019682 GO:0019693 GO:0030054 GO:0033993 GO:0034284 GO:0034285 GO:0034641 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046496 GO:0046686 GO:0050896 GO:0051156 GO:0051186 GO:0055044 GO:0055086 GO:0055114 GO:0071704 GO:0072524 GO:0097305 GO:1901135 GO:1901360 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00030 ko00480 ko01100 ko01110 ko01120 ko01130 ko01200 map00030 map00480 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

6PGD NAD_binding_2

Protein Analysis

495

Amino Acids

53.74

Weight (kDa)

5.8

Isoelectric Point (pI)

26.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_2	PF03446	9 - 180	2.2e-46	NAD binding domain of 6-phosphogluconate dehydrogenase
6PGD	PF00393	185 - 480	7.2e-125	6-phosphogluconate dehydrogenase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008259)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64190 AT5G41670 AT5G41670 AT5G41670 AT5G41670
fragaria_vesca	FvH4_4g04820
malus_domestica	MD06G1098700.v1.1 MD14G1117900.v1.1
prunus_persica	Prupe.5G112300_v2.0.a1 Prupe.5G112300_v2.0.a1
pyrus_communis	pycom06g09400
rosa_chinensis	RchiOBHm_Chr7g0195821
rosa_laevigata	RLG00000004086
rosa_multiflora	Rmu_sc0002445.1_g000011
rosa_roxburghii	Rroxscaffold_3G00260070 Rroxscaffold_4G00304940
rosa_rugosa	Rorug07G0026400
rosa_samantha	Rh1DG221600 Rh7AG154400 Rh7BG156200 Rh7CG159900 Rh7DG155500
rosa_wichuraiana	Rw7G013190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	496
AasI	GACNNNNNNGTC	1 cut(s)	137
Acc36I	ACCTGC	1 cut(s)	496
AccB1I	GGYRCC	3 cut(s)	251, 419, 803
AccI	GTMKAC	3 cut(s)	105, 129, 261
AccII	CGCG	4 cut(s)	147, 287, 503, 866
AclWI	GGATC	2 cut(s)	219, 1205
AcoI	YGGCCR	2 cut(s)	45, 538
AcsI	RAATTY	3 cut(s)	652, 1090, 1096
AcyI	GRCGYC	3 cut(s)	252, 306, 420
AfaI	GTAC	8 cut(s)	185, 290, 335, 467, 533, 590, 1294, 1322
AfiI	CCNNNNNNNGG	3 cut(s)	176, 394, 813
AflIII	ACRYGT	1 cut(s)	624
AgsI	TTSAA	6 cut(s)	631, 736, 898, 931, 946, 1096
AhlI	ACTAGT	1 cut(s)	968
AjiI	CACGTC	1 cut(s)	625
AjnI	CCWGG	4 cut(s)	42, 459, 477, 1417
AjuI	GAANNNNNNNTTGG	4 cut(s)	734, 766, 1082, 1114
AluBI	AGCT	8 cut(s)	604, 661, 697, 705, 838, 1038, 1247, 1391
AluI	AGCT	8 cut(s)	604, 661, 697, 705, 838, 1038, 1247, 1391
Alw21I	GWGCWC	1 cut(s)	1393
Alw26I	GTCTC	4 cut(s)	128, 406, 443, 1371
AlwI	GGATC	2 cut(s)	219, 1205
Ama87I	CYCGRG	1 cut(s)	433
ApeKI	GCWGC	4 cut(s)	601, 830, 1247, 1280
ApoI	RAATTY	3 cut(s)	652, 1090, 1096
ArsI	GACNNNNNNTTYG	2 cut(s)	186, 218
Asp700I	GAANNNNTTC	1 cut(s)	89
AspLEI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 505, 917
AspS9I	GGNCC	7 cut(s)	55, 376, 431, 453, 518, 571, 1234
AsuC2I	CCSGG	6 cut(s)	300, 447, 808, 940, 1285, 1299
AsuHPI	GGTGA	1 cut(s)	751
AsuII	TTCGAA	1 cut(s)	650
AvaI	CYCGRG	1 cut(s)	433
AvaII	GGWCC	3 cut(s)	453, 571, 1234
BaeGI	GKGCMC	1 cut(s)	806
BaeI	ACNNNNGTAYC	2 cut(s)	874, 907
BanI	GGYRCC	3 cut(s)	251, 419, 803
BanII	GRGCYC	2 cut(s)	300, 1393
BauI	CACGAG	1 cut(s)	359
Bbv12I	GWGCWC	1 cut(s)	1393
BbvI	GCAGC	4 cut(s)	613, 817, 1234, 1292
BccI	CCATC	5 cut(s)	104, 278, 317, 562, 752
BceAI	ACGGC	7 cut(s)	32, 134, 334, 445, 505, 607, 1130
BcgI	CGANNNNNNTGC	4 cut(s)	16, 50, 424, 458
BciT130I	CCWGG	4 cut(s)	44, 461, 479, 1419
BcnI	CCSGG	6 cut(s)	300, 447, 808, 940, 1285, 1299
BcoDI	GTCTC	4 cut(s)	128, 406, 443, 1371
BcuI	ACTAGT	1 cut(s)	968
BfaI	CTAG	4 cut(s)	969, 1113, 1311, 1344
BfoI	RGCGCY	5 cut(s)	220, 255, 352, 423, 918
BfuAI	ACCTGC	1 cut(s)	496
BglI	GCCNNNNNGGC	2 cut(s)	39, 923
BlpI	GCTNAGC	1 cut(s)	834
BmcAI	AGTACT	1 cut(s)	1294
Bme18I	GGWCC	3 cut(s)	453, 571, 1234
BmeT110I	CYCGRG	1 cut(s)	433
BmgBI	CACGTC	1 cut(s)	625
BmgT120I	GGNCC	7 cut(s)	55, 376, 431, 453, 518, 571, 1234
BmiI	GGNNCC	7 cut(s)	253, 297, 421, 454, 455, 805, 852
BmsI	GCATC	2 cut(s)	36, 363
BpmI	CTGGAG	2 cut(s)	197, 719
Bpu10I	CCTNAGC	2 cut(s)	1044, 1224
Bpu1102I	GCTNAGC	1 cut(s)	834
Bpu14I	TTCGAA	1 cut(s)	650
BpuEI	CTTGAG	1 cut(s)	907
BpuMI	CCSGG	6 cut(s)	300, 447, 808, 940, 1285, 1299
BsaHI	GRCGYC	3 cut(s)	252, 306, 420
BsaI	GGTCTC	1 cut(s)	128
BsaJI	CCNNGG	9 cut(s)	123, 372, 388, 427, 541, 612, 843, 918, 1417
BsaWI	WCCGGW	1 cut(s)	176
BsaXI	ACNNNNNCTCC	2 cut(s)	350, 380
Bsc4I	CCNNNNNNNGG	3 cut(s)	176, 394, 813
Bse118I	RCCGGY	1 cut(s)	248
BseBI	CCWGG	4 cut(s)	44, 461, 479, 1419
BseDI	CCNNGG	9 cut(s)	123, 372, 388, 427, 541, 612, 843, 918, 1417
BseGI	GGATG	4 cut(s)	354, 763, 801, 1056
BseLI	CCNNNNNNNGG	3 cut(s)	176, 394, 813
BseMII	CTCAG	2 cut(s)	825, 1058
BseRI	GAGGAG	6 cut(s)	371, 428, 917, 935, 965, 1270
BseSI	GKGCMC	1 cut(s)	806
BseXI	GCAGC	4 cut(s)	613, 817, 1234, 1292
Bsh1236I	CGCG	4 cut(s)	147, 287, 503, 866
Bsh1285I	CGRYCG	1 cut(s)	145
BshNI	GGYRCC	3 cut(s)	251, 419, 803
BsiEI	CGRYCG	1 cut(s)	145
BsiHKAI	GWGCWC	1 cut(s)	1393
BsiHKCI	CYCGRG	1 cut(s)	433
BslFI	GGGAC	1 cut(s)	439
BslI	CCNNNNNNNGG	3 cut(s)	176, 394, 813
BsmAI	GTCTC	4 cut(s)	128, 406, 443, 1371
BsmFI	GGGAC	1 cut(s)	439
BsmI	GAATGC	1 cut(s)	1174
Bso31I	GGTCTC	1 cut(s)	128
BsoBI	CYCGRG	1 cut(s)	433
Bsp119I	TTCGAA	1 cut(s)	650
Bsp1286I	GDGCHC	3 cut(s)	300, 806, 1393
Bsp143I	GATC	4 cut(s)	142, 224, 1210, 1411
Bsp1720I	GCTNAGC	1 cut(s)	834
BspCNI	CTCAG	2 cut(s)	826, 1057
BspFNI	CGCG	4 cut(s)	147, 287, 503, 866
BspLI	GGNNCC	7 cut(s)	253, 297, 421, 454, 455, 805, 852
BspMI	ACCTGC	1 cut(s)	496
BspPI	GGATC	2 cut(s)	219, 1205
BspT104I	TTCGAA	1 cut(s)	650
BspT107I	GGYRCC	3 cut(s)	251, 419, 803
BspTNI	GGTCTC	1 cut(s)	128
BsrFI	RCCGGY	1 cut(s)	248
BssAI	RCCGGY	1 cut(s)	248
BssECI	CCNNGG	9 cut(s)	123, 372, 388, 427, 541, 612, 843, 918, 1417
BssMI	GATC	4 cut(s)	142, 224, 1210, 1411
BssNI	GRCGYC	3 cut(s)	252, 306, 420
BssSI	CACGAG	1 cut(s)	359
BssT1I	CCWWGG	3 cut(s)	123, 372, 541
Bst2BI	CACGAG	1 cut(s)	359
Bst2UI	CCWGG	4 cut(s)	44, 461, 479, 1419
Bst4CI	ACNGT	2 cut(s)	139, 820
Bst6I	CTCTTC	1 cut(s)	980
BstACI	GRCGYC	3 cut(s)	252, 306, 420
BstBI	TTCGAA	1 cut(s)	650
BstDEI	CTNAG	4 cut(s)	834, 1044, 1068, 1224
BstDSI	CCRYGG	2 cut(s)	427, 843
BstF5I	GGATG	4 cut(s)	354, 763, 801, 1056
BstFNI	CGCG	4 cut(s)	147, 287, 503, 866
BstH2I	RGCGCY	5 cut(s)	220, 255, 352, 423, 918
BstHHI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 505, 917
BstKTI	GATC	4 cut(s)	145, 227, 1213, 1414
BstMAI	GTCTC	4 cut(s)	128, 406, 443, 1371
BstMBI	GATC	4 cut(s)	142, 224, 1210, 1411
BstMCI	CGRYCG	1 cut(s)	145
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 39, 44, 284, 417, 923, 1019, 1280, 1345
BstNI	CCWGG	4 cut(s)	44, 461, 479, 1419
BstSLI	GKGCMC	1 cut(s)	806
BstUI	CGCG	4 cut(s)	147, 287, 503, 866
BstV1I	GCAGC	4 cut(s)	613, 817, 1234, 1292
BstX2I	RGATCY	1 cut(s)	224
BstYI	RGATCY	1 cut(s)	224
BtgI	CCRYGG	2 cut(s)	427, 843
BtgZI	GCGATG	2 cut(s)	61, 256
BtrI	CACGTC	1 cut(s)	625
BtsCI	GGATG	4 cut(s)	354, 763, 801, 1056
BveI	ACCTGC	1 cut(s)	496
CfoI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 505, 917
Cfr10I	RCCGGY	1 cut(s)	248
Cfr13I	GGNCC	7 cut(s)	55, 376, 431, 453, 518, 571, 1234
CseI	GACGC	2 cut(s)	314, 855
Csp6I	GTAC	8 cut(s)	184, 289, 334, 466, 532, 589, 1293, 1321
CspCI	CAANNNNNGTGG	2 cut(s)	1232, 1267
CviAII	CATG	4 cut(s)	52, 292, 394, 442
CviQI	GTAC	8 cut(s)	184, 289, 334, 466, 532, 589, 1293, 1321
DdeI	CTNAG	4 cut(s)	834, 1044, 1068, 1224
DinI	GGCGCC	2 cut(s)	253, 421
DpnI	GATC	4 cut(s)	144, 226, 1212, 1413
DpnII	GATC	4 cut(s)	142, 224, 1210, 1411
DrdI	GACNNNNNNGTC	1 cut(s)	137
DseDI	GACNNNNNNGTC	1 cut(s)	137
EaeI	YGGCCR	2 cut(s)	45, 538
Eam1104I	CTCTTC	1 cut(s)	980
EarI	CTCTTC	1 cut(s)	980
EciI	GGCGGA	2 cut(s)	358, 770
Ecl136II	GAGCTC	1 cut(s)	1391
Eco130I	CCWWGG	3 cut(s)	123, 372, 541
Eco147I	AGGCCT	2 cut(s)	365, 617
Eco24I	GRGCYC	2 cut(s)	300, 1393
Eco31I	GGTCTC	1 cut(s)	128
Eco47I	GGWCC	3 cut(s)	453, 571, 1234
Eco53kI	GAGCTC	1 cut(s)	1391
Eco88I	CYCGRG	1 cut(s)	433
EcoICRI	GAGCTC	1 cut(s)	1391
EcoO109I	RGGNCCY	2 cut(s)	376, 453
EcoRI	GAATTC	1 cut(s)	652
EcoRII	CCWGG	4 cut(s)	42, 459, 477, 1417
EcoT14I	CCWWGG	3 cut(s)	123, 372, 541
EcoT38I	GRGCYC	2 cut(s)	300, 1393
EgeI	GGCGCC	2 cut(s)	253, 421
EheI	GGCGCC	2 cut(s)	253, 421
ErhI	CCWWGG	3 cut(s)	123, 372, 541
FaeI	CATG	4 cut(s)	55, 295, 397, 445
FaqI	GGGAC	1 cut(s)	439
FatI	CATG	4 cut(s)	51, 291, 393, 441
FauI	CCCGC	5 cut(s)	32, 431, 443, 539, 635
FblI	GTMKAC	3 cut(s)	105, 129, 261
FokI	GGATG	4 cut(s)	341, 770, 808, 1063
FriOI	GRGCYC	2 cut(s)	300, 1393
FspBI	CTAG	4 cut(s)	969, 1113, 1311, 1344
GlaI	GCGC	7 cut(s)	148, 218, 253, 350, 421, 504, 916
GsuI	CTGGAG	2 cut(s)	197, 719
HaeII	RGCGCY	5 cut(s)	220, 255, 352, 423, 918
HgaI	GACGC	2 cut(s)	314, 855
HhaI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 505, 917
Hin1I	GRCGYC	3 cut(s)	252, 306, 420
Hin1II	CATG	4 cut(s)	55, 295, 397, 445
Hin6I	GCGC	7 cut(s)	147, 217, 252, 349, 420, 503, 915
HinP1I	GCGC	7 cut(s)	147, 217, 252, 349, 420, 503, 915
HincII	GTYRAC	2 cut(s)	130, 262
HindII	GTYRAC	2 cut(s)	130, 262
HinfI	GANTC	4 cut(s)	399, 436, 582, 1183
HphI	GGTGA	1 cut(s)	751
Hpy166II	GTNNAC	7 cut(s)	106, 130, 154, 186, 262, 574, 1440
Hpy188I	TCNGA	3 cut(s)	613, 658, 1179
Hpy188III	TCNNGA	3 cut(s)	565, 1214, 1237
Hpy8I	GTNNAC	7 cut(s)	106, 130, 154, 186, 262, 574, 1440
Hpy99I	CGWCG	7 cut(s)	134, 143, 263, 308, 320, 626, 871
HpyAV	CCTTC	5 cut(s)	152, 793, 892, 1075, 1117
HpyCH4III	ACNGT	2 cut(s)	139, 820
HpyCH4IV	ACGT	3 cut(s)	474, 530, 624
HpyCH4V	TGCA	1 cut(s)	601
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 39, 44, 284, 417, 923, 1019, 1280, 1345
HpyF3I	CTNAG	4 cut(s)	834, 1044, 1068, 1224
HpySE526I	ACGT	3 cut(s)	474, 530, 624
Hsp92I	GRCGYC	3 cut(s)	252, 306, 420
Hsp92II	CATG	4 cut(s)	55, 295, 397, 445
HspAI	GCGC	7 cut(s)	147, 217, 252, 349, 420, 503, 915
KasI	GGCGCC	2 cut(s)	251, 419
KflI	GGGWCCC	1 cut(s)	453
KroI	GCCGGC	1 cut(s)	248
KroNI	GCCGGC	1 cut(s)	250
Kzo9I	GATC	4 cut(s)	142, 224, 1210, 1411
LmnI	GCTCC	5 cut(s)	295, 658, 694, 856, 1388
Lsp1109I	GCAGC	4 cut(s)	613, 817, 1234, 1292
LweI	GCATC	2 cut(s)	36, 363
MaeI	CTAG	4 cut(s)	969, 1113, 1311, 1344
MaeII	ACGT	3 cut(s)	474, 530, 624
MaeIII	GTNAC	3 cut(s)	526, 554, 964
MalI	GATC	4 cut(s)	144, 226, 1212, 1413
MboI	GATC	4 cut(s)	142, 224, 1210, 1411
MboII	GAAGA	2 cut(s)	643, 997
MfeI	CAATTG	1 cut(s)	1480
MflI	RGATCY	1 cut(s)	224
MhlI	GDGCHC	3 cut(s)	300, 806, 1393
MluCI	AATT	5 cut(s)	652, 1090, 1096, 1106, 1480
Mly113I	GGCGCC	2 cut(s)	252, 420
MlyI	GAGTC	2 cut(s)	408, 445
MmeI	TCCRAC	3 cut(s)	495, 852, 1067
MroNI	GCCGGC	1 cut(s)	248
MroXI	GAANNNNTTC	1 cut(s)	89
MseI	TTAA	1 cut(s)	1164
MslI	CAYNNNNRTG	1 cut(s)	1398
MspA1I	CMGCKG	1 cut(s)	604
MunI	CAATTG	1 cut(s)	1480
Mva1269I	GAATGC	1 cut(s)	1174
MvaI	CCWGG	4 cut(s)	44, 461, 479, 1419
MvnI	CGCG	4 cut(s)	147, 287, 503, 866
MwoI	GCNNNNNNNGC	9 cut(s)	14, 39, 44, 284, 417, 923, 1019, 1280, 1345
NaeI	GCCGGC	1 cut(s)	250
NarI	GGCGCC	2 cut(s)	252, 420
NciI	CCSGG	6 cut(s)	300, 447, 808, 940, 1285, 1299
NdeII	GATC	4 cut(s)	142, 224, 1210, 1411
NgoMIV	GCCGGC	1 cut(s)	248
NlaIII	CATG	4 cut(s)	55, 295, 397, 445
NlaIV	GGNNCC	7 cut(s)	253, 297, 421, 454, 455, 805, 852
NmeAIII	GCCGAG	3 cut(s)	106, 369, 943
NmuCI	GTSAC	2 cut(s)	526, 964
NspV	TTCGAA	1 cut(s)	650
PaqCI	CACCTGC	1 cut(s)	496
PceI	AGGCCT	2 cut(s)	365, 617
PcsI	WCGNNNNNNNCGW	9 cut(s)	135, 138, 147, 312, 324, 333, 342, 522, 591
PctI	GAATGC	1 cut(s)	1174
PdiI	GCCGGC	1 cut(s)	250
PdmI	GAANNNNTTC	1 cut(s)	89
PfeI	GAWTC	2 cut(s)	582, 1183
PflFI	GACNNNGTC	1 cut(s)	200
PfoI	TCCNGGA	2 cut(s)	477, 1297
Ple19I	CGATCG	1 cut(s)	145
PleI	GAGTC	2 cut(s)	407, 444
PluTI	GGCGCC	2 cut(s)	255, 423
PpsI	GAGTC	2 cut(s)	407, 444
PpuMI	RGGWCCY	1 cut(s)	453
Psp124BI	GAGCTC	1 cut(s)	1393
Psp5II	RGGWCCY	1 cut(s)	453
Psp6I	CCWGG	4 cut(s)	42, 459, 477, 1417
PspGI	CCWGG	4 cut(s)	42, 459, 477, 1417
PspN4I	GGNNCC	7 cut(s)	253, 297, 421, 454, 455, 805, 852
PspPI	GGNCC	7 cut(s)	55, 376, 431, 453, 518, 571, 1234
PspPPI	RGGWCCY	1 cut(s)	453
PsuI	RGATCY	1 cut(s)	224
PsyI	GACNNNGTC	1 cut(s)	200
PvuI	CGATCG	1 cut(s)	145
PvuII	CAGCTG	1 cut(s)	604
RsaI	GTAC	8 cut(s)	185, 290, 335, 467, 533, 590, 1294, 1322
RsaNI	GTAC	8 cut(s)	184, 289, 334, 466, 532, 589, 1293, 1321
RseI	CAYNNNNRTG	1 cut(s)	1398
SacI	GAGCTC	1 cut(s)	1393
SalI	GTCGAC	2 cut(s)	128, 260
SaqAI	TTAA	1 cut(s)	1164
Sau3AI	GATC	4 cut(s)	142, 224, 1210, 1411
Sau96I	GGNCC	7 cut(s)	55, 376, 431, 453, 518, 571, 1234
ScaI	AGTACT	1 cut(s)	1294
SchI	GAGTC	2 cut(s)	408, 445
SduI	GDGCHC	3 cut(s)	300, 806, 1393
SfaNI	GCATC	2 cut(s)	36, 363
SfiI	GGCCNNNNNGGCC	1 cut(s)	39
SfoI	GGCGCC	2 cut(s)	253, 421
SfuI	TTCGAA	1 cut(s)	650
SinI	GGWCC	3 cut(s)	453, 571, 1234
SmiMI	CAYNNNNRTG	1 cut(s)	1398
SmlI	CTYRAG	1 cut(s)	886
SmoI	CTYRAG	1 cut(s)	886
SpeI	ACTAGT	1 cut(s)	968
Sse9I	AATT	5 cut(s)	652, 1090, 1096, 1106, 1480
SseBI	AGGCCT	2 cut(s)	365, 617
SspDI	GGCGCC	2 cut(s)	251, 419
SspMI	CTAG	4 cut(s)	969, 1113, 1311, 1344
SstI	GAGCTC	1 cut(s)	1393
StuI	AGGCCT	2 cut(s)	365, 617
StyI	CCWWGG	3 cut(s)	123, 372, 541
TaaI	ACNGT	2 cut(s)	139, 820
TaiI	ACGT	3 cut(s)	477, 533, 627
TaqI	TCGA	7 cut(s)	129, 141, 261, 315, 585, 650, 783
TasI	AATT	5 cut(s)	652, 1090, 1096, 1106, 1480
TatI	WGTACW	2 cut(s)	183, 1292
TauI	GCSGC	7 cut(s)	278, 324, 354, 411, 503, 851, 866
TfiI	GAWTC	2 cut(s)	582, 1183
Tru1I	TTAA	1 cut(s)	1164
Tru9I	TTAA	1 cut(s)	1164
TseFI	GTSAC	2 cut(s)	526, 964
TseI	GCWGC	4 cut(s)	601, 830, 1247, 1280
Tsp45I	GTSAC	2 cut(s)	526, 964
TspDTI	ATGAA	3 cut(s)	812, 1067, 1418
TspGWI	ACGGA	4 cut(s)	91, 217, 594, 832
Tth111I	GACNNNGTC	1 cut(s)	200
VpaK11BI	GGWCC	3 cut(s)	453, 571, 1234
XapI	RAATTY	3 cut(s)	652, 1090, 1096
XmiI	GTMKAC	3 cut(s)	105, 129, 261
XmnI	GAANNNNTTC	1 cut(s)	89
XspI	CTAG	4 cut(s)	969, 1113, 1311, 1344
ZrmI	AGTACT	1 cut(s)	1294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.