Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G66045 AT4G03040 AT5G33330 |
| fragaria_vesca | FvH4_1g08831 FvH4_1g28351 FvH4_6g21511 |
| malus_domestica | MD07G1073700.v1.1 |
| prunus_persica | Prupe.5G022500_v2.0.a1 Prupe.6G105300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0148031 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 17 |
| AciI | CCGC | 1 cut(s) | 149 |
| AcoI | YGGCCR | 1 cut(s) | 181 |
| AcsI | RAATTY | 1 cut(s) | 350 |
| AcuI | CTGAAG | 2 cut(s) | 192, 237 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 394 |
| AgsI | TTSAA | 4 cut(s) | 236, 260, 299, 349 |
| AluBI | AGCT | 8 cut(s) | 90, 251, 263, 303, 329, 336, 380, 401 |
| AluI | AGCT | 8 cut(s) | 90, 251, 263, 303, 329, 336, 380, 401 |
| AoxI | GGCC | 1 cut(s) | 181 |
| ApoI | RAATTY | 1 cut(s) | 350 |
| AsuHPI | GGTGA | 1 cut(s) | 24 |
| BbsI | GAAGAC | 2 cut(s) | 182, 318 |
| BclI | TGATCA | 1 cut(s) | 21 |
| BfaI | CTAG | 2 cut(s) | 87, 402 |
| BfmI | CTRYAG | 1 cut(s) | 264 |
| BmiI | GGNNCC | 1 cut(s) | 57 |
| BmsI | GCATC | 2 cut(s) | 109, 373 |
| BpiI | GAAGAC | 2 cut(s) | 182, 318 |
| BpuEI | CTTGAG | 1 cut(s) | 179 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 394 |
| Bse1I | ACTGG | 1 cut(s) | 59 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 394 |
| BseMII | CTCAG | 1 cut(s) | 240 |
| BseNI | ACTGG | 1 cut(s) | 59 |
| BshFI | GGCC | 1 cut(s) | 183 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 394 |
| BsmI | GAATGC | 1 cut(s) | 370 |
| BsnI | GGCC | 1 cut(s) | 183 |
| Bsp143I | GATC | 1 cut(s) | 21 |
| BspACI | CCGC | 1 cut(s) | 149 |
| BspANI | GGCC | 1 cut(s) | 183 |
| BspCNI | CTCAG | 1 cut(s) | 239 |
| BspLI | GGNNCC | 1 cut(s) | 57 |
| BsrI | ACTGG | 1 cut(s) | 59 |
| BssMI | GATC | 1 cut(s) | 21 |
| BstDEI | CTNAG | 2 cut(s) | 226, 307 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 392 |
| BstKTI | GATC | 1 cut(s) | 24 |
| BstMBI | GATC | 1 cut(s) | 21 |
| BstSFI | CTRYAG | 1 cut(s) | 264 |
| BstV2I | GAAGAC | 2 cut(s) | 182, 318 |
| BsuRI | GGCC | 1 cut(s) | 183 |
| CviAII | CATG | 2 cut(s) | 126, 179 |
| CviJI | RGCY | 9 cut(s) | 90, 183, 251, 263, 303, 329, 336, 380, 401 |
| CviKI_1 | RGCY | 9 cut(s) | 90, 183, 251, 263, 303, 329, 336, 380, 401 |
| DdeI | CTNAG | 2 cut(s) | 226, 307 |
| DpnI | GATC | 1 cut(s) | 23 |
| DpnII | GATC | 1 cut(s) | 21 |
| EaeI | YGGCCR | 1 cut(s) | 181 |
| Eco57I | CTGAAG | 2 cut(s) | 192, 237 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 392 |
| FaeI | CATG | 2 cut(s) | 129, 182 |
| FaiI | YATR | 7 cut(s) | 17, 114, 127, 180, 212, 219, 423 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 402, 434 |
| FatI | CATG | 2 cut(s) | 125, 178 |
| FauI | CCCGC | 1 cut(s) | 142 |
| FbaI | TGATCA | 1 cut(s) | 21 |
| FspBI | CTAG | 2 cut(s) | 87, 402 |
| HaeIII | GGCC | 1 cut(s) | 183 |
| Hin1II | CATG | 2 cut(s) | 129, 182 |
| HindIII | AAGCTT | 1 cut(s) | 249 |
| HinfI | GANTC | 4 cut(s) | 163, 224, 295, 413 |
| HphI | GGTGA | 1 cut(s) | 24 |
| Hpy188I | TCNGA | 1 cut(s) | 363 |
| Hpy188III | TCNNGA | 2 cut(s) | 196, 432 |
| Hpy99I | CGWCG | 1 cut(s) | 363 |
| HpyAV | CCTTC | 2 cut(s) | 46, 388 |
| HpyCH4V | TGCA | 3 cut(s) | 178, 368, 428 |
| HpyF3I | CTNAG | 2 cut(s) | 226, 307 |
| Hsp92II | CATG | 2 cut(s) | 129, 182 |
| Ksp22I | TGATCA | 1 cut(s) | 21 |
| Kzo9I | GATC | 1 cut(s) | 21 |
| LmnI | GCTCC | 2 cut(s) | 95, 334 |
| LpnPI | CCDG | 1 cut(s) | 72 |
| LweI | GCATC | 2 cut(s) | 109, 373 |
| MaeI | CTAG | 2 cut(s) | 87, 402 |
| MaeIII | GTNAC | 2 cut(s) | 30, 269 |
| MalI | GATC | 1 cut(s) | 23 |
| MboI | GATC | 1 cut(s) | 21 |
| MboII | GAAGA | 4 cut(s) | 182, 195, 254, 323 |
| MluCI | AATT | 1 cut(s) | 350 |
| MlyI | GAGTC | 1 cut(s) | 218 |
| MmeI | TCCRAC | 3 cut(s) | 117, 140, 341 |
| MnlI | CCTC | 3 cut(s) | 82, 133, 217 |
| MseI | TTAA | 2 cut(s) | 63, 407 |
| Mva1269I | GAATGC | 1 cut(s) | 370 |
| NdeII | GATC | 1 cut(s) | 21 |
| NlaIII | CATG | 2 cut(s) | 129, 182 |
| NlaIV | GGNNCC | 1 cut(s) | 57 |
| NmuCI | GTSAC | 2 cut(s) | 30, 269 |
| PctI | GAATGC | 1 cut(s) | 370 |
| PfeI | GAWTC | 3 cut(s) | 163, 295, 413 |
| PleI | GAGTC | 1 cut(s) | 218 |
| PpsI | GAGTC | 1 cut(s) | 218 |
| PsiI | TTATAA | 1 cut(s) | 17 |
| PspN4I | GGNNCC | 1 cut(s) | 57 |
| SaqAI | TTAA | 2 cut(s) | 63, 407 |
| Sau3AI | GATC | 1 cut(s) | 21 |
| SchI | GAGTC | 1 cut(s) | 218 |
| SfaNI | GCATC | 2 cut(s) | 109, 373 |
| SfcI | CTRYAG | 1 cut(s) | 264 |
| SmlI | CTYRAG | 1 cut(s) | 194 |
| SmoI | CTYRAG | 1 cut(s) | 194 |
| Sse9I | AATT | 1 cut(s) | 350 |
| SsiI | CCGC | 1 cut(s) | 149 |
| SspMI | CTAG | 2 cut(s) | 87, 402 |
| TaqI | TCGA | 2 cut(s) | 222, 392 |
| TasI | AATT | 1 cut(s) | 350 |
| TfiI | GAWTC | 3 cut(s) | 163, 295, 413 |
| Tru1I | TTAA | 2 cut(s) | 63, 407 |
| Tru9I | TTAA | 2 cut(s) | 63, 407 |
| TseFI | GTSAC | 2 cut(s) | 30, 269 |
| Tsp45I | GTSAC | 2 cut(s) | 30, 269 |
| TspDTI | ATGAA | 1 cut(s) | 343 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 392 |
| XapI | RAATTY | 1 cut(s) | 350 |
| XspI | CTAG | 2 cut(s) | 87, 402 |