Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G66045 AT4G03040 AT5G33330 |
| fragaria_vesca | FvH4_1g08831 FvH4_1g28351 FvH4_6g21511 |
| malus_domestica | MD07G1073700.v1.1 |
| prunus_persica | Prupe.5G022500_v2.0.a1 Prupe.6G105300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0148031 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 270 |
| AccI | GTMKAC | 1 cut(s) | 522 |
| AciI | CCGC | 3 cut(s) | 275, 429, 446 |
| AcsI | RAATTY | 1 cut(s) | 563 |
| AcuI | CTGAAG | 1 cut(s) | 158 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 84 |
| AgsI | TTSAA | 4 cut(s) | 55, 62, 512, 573 |
| AluBI | AGCT | 2 cut(s) | 145, 173 |
| AluI | AGCT | 2 cut(s) | 145, 173 |
| Alw26I | GTCTC | 2 cut(s) | 83, 538 |
| ApeKI | GCWGC | 1 cut(s) | 142 |
| ApoI | RAATTY | 1 cut(s) | 563 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 28 |
| AspLEI | GCGC | 1 cut(s) | 484 |
| AspS9I | GGNCC | 1 cut(s) | 281 |
| AsuHPI | GGTGA | 3 cut(s) | 97, 109, 306 |
| AvaII | GGWCC | 1 cut(s) | 281 |
| BaeGI | GKGCMC | 1 cut(s) | 275 |
| BanI | GGYRCC | 1 cut(s) | 270 |
| BbsI | GAAGAC | 1 cut(s) | 241 |
| BbvI | GCAGC | 1 cut(s) | 154 |
| BceAI | ACGGC | 3 cut(s) | 423, 443, 459 |
| BcoDI | GTCTC | 2 cut(s) | 83, 538 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 446 |
| BisI | GCNGC | 2 cut(s) | 143, 447 |
| BlsI | GCNGC | 2 cut(s) | 144, 448 |
| Bme18I | GGWCC | 1 cut(s) | 281 |
| BmgT120I | GGNCC | 1 cut(s) | 281 |
| BmiI | GGNNCC | 1 cut(s) | 272 |
| BmsI | GCATC | 2 cut(s) | 115, 242 |
| BpiI | GAAGAC | 1 cut(s) | 241 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 62, 94 |
| BpmI | CTGGAG | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 1 cut(s) | 441 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 84 |
| Bse3DI | GCAATG | 1 cut(s) | 292 |
| BseDI | CCNNGG | 1 cut(s) | 441 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 84 |
| BseMI | GCAATG | 1 cut(s) | 292 |
| BseRI | GAGGAG | 2 cut(s) | 227, 313 |
| BseSI | GKGCMC | 1 cut(s) | 275 |
| BseXI | GCAGC | 1 cut(s) | 154 |
| Bsh1285I | CGRYCG | 1 cut(s) | 429 |
| BshNI | GGYRCC | 1 cut(s) | 270 |
| BsiEI | CGRYCG | 1 cut(s) | 429 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 84 |
| BsmAI | GTCTC | 2 cut(s) | 83, 538 |
| Bsp1286I | GDGCHC | 1 cut(s) | 275 |
| BspACI | CCGC | 3 cut(s) | 275, 429, 446 |
| BspLI | GGNNCC | 1 cut(s) | 272 |
| BspQI | GCTCTTC | 1 cut(s) | 30 |
| BspT107I | GGYRCC | 1 cut(s) | 270 |
| BsrDI | GCAATG | 1 cut(s) | 292 |
| BssECI | CCNNGG | 1 cut(s) | 441 |
| Bst4CI | ACNGT | 2 cut(s) | 516, 580 |
| Bst6I | CTCTTC | 2 cut(s) | 30, 541 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 239, 437 |
| BstC8I | GCNNGC | 3 cut(s) | 175, 275, 456 |
| BstDSI | CCRYGG | 1 cut(s) | 441 |
| BstHHI | GCGC | 1 cut(s) | 484 |
| BstMAI | GTCTC | 2 cut(s) | 83, 538 |
| BstMCI | CGRYCG | 1 cut(s) | 429 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 239, 437, 446, 455 |
| BstSLI | GKGCMC | 1 cut(s) | 275 |
| BstV1I | GCAGC | 1 cut(s) | 154 |
| BstV2I | GAAGAC | 1 cut(s) | 241 |
| BtgI | CCRYGG | 1 cut(s) | 441 |
| BtsIMutI | CAGTG | 1 cut(s) | 134 |
| Cac8I | GCNNGC | 3 cut(s) | 175, 275, 456 |
| CfoI | GCGC | 1 cut(s) | 484 |
| Cfr13I | GGNCC | 1 cut(s) | 281 |
| CseI | GACGC | 1 cut(s) | 460 |
| CviAII | CATG | 2 cut(s) | 289, 298 |
| CviJI | RGCY | 2 cut(s) | 145, 173 |
| CviKI_1 | RGCY | 2 cut(s) | 145, 173 |
| Eam1104I | CTCTTC | 2 cut(s) | 30, 541 |
| EarI | CTCTTC | 2 cut(s) | 30, 541 |
| Eco47I | GGWCC | 1 cut(s) | 281 |
| Eco57I | CTGAAG | 1 cut(s) | 158 |
| EcoT22I | ATGCAT | 1 cut(s) | 294 |
| FaeI | CATG | 2 cut(s) | 292, 301 |
| FaiI | YATR | 6 cut(s) | 36, 186, 290, 299, 366, 368 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 222, 254, 295, 327 |
| FatI | CATG | 2 cut(s) | 288, 297 |
| FauI | CCCGC | 1 cut(s) | 282 |
| FblI | GTMKAC | 1 cut(s) | 522 |
| Fnu4HI | GCNGC | 2 cut(s) | 143, 447 |
| Fsp4HI | GCNGC | 2 cut(s) | 143, 447 |
| GlaI | GCGC | 1 cut(s) | 483 |
| GluI | GCNGC | 2 cut(s) | 143, 447 |
| GsuI | CTGGAG | 1 cut(s) | 210 |
| HgaI | GACGC | 1 cut(s) | 460 |
| HhaI | GCGC | 1 cut(s) | 484 |
| Hin1II | CATG | 2 cut(s) | 292, 301 |
| Hin6I | GCGC | 1 cut(s) | 482 |
| HinP1I | GCGC | 1 cut(s) | 482 |
| HinfI | GANTC | 3 cut(s) | 62, 338, 356 |
| HphI | GGTGA | 3 cut(s) | 97, 109, 306 |
| Hpy166II | GTNNAC | 2 cut(s) | 262, 523 |
| Hpy188III | TCNNGA | 3 cut(s) | 55, 227, 421 |
| Hpy8I | GTNNAC | 2 cut(s) | 262, 523 |
| Hpy99I | CGWCG | 2 cut(s) | 454, 496 |
| HpyCH4III | ACNGT | 2 cut(s) | 516, 580 |
| HpyCH4IV | ACGT | 1 cut(s) | 494 |
| HpyCH4V | TGCA | 4 cut(s) | 34, 128, 292, 297 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 239, 437, 446, 455 |
| HpySE526I | ACGT | 1 cut(s) | 494 |
| Hsp92II | CATG | 2 cut(s) | 292, 301 |
| HspAI | GCGC | 1 cut(s) | 482 |
| LguI | GCTCTTC | 1 cut(s) | 30 |
| LpnPI | CCDG | 5 cut(s) | 193, 240, 252, 417, 434 |
| Lsp1109I | GCAGC | 1 cut(s) | 154 |
| LweI | GCATC | 2 cut(s) | 115, 242 |
| MaeII | ACGT | 1 cut(s) | 494 |
| MaeIII | GTNAC | 1 cut(s) | 403 |
| MboII | GAAGA | 6 cut(s) | 17, 241, 464, 491, 500, 528 |
| MhlI | GDGCHC | 1 cut(s) | 275 |
| MluCI | AATT | 3 cut(s) | 153, 196, 563 |
| MmeI | TCCRAC | 1 cut(s) | 332 |
| Mph1103I | ATGCAT | 1 cut(s) | 294 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 239, 437, 446, 455 |
| NlaIII | CATG | 2 cut(s) | 292, 301 |
| NlaIV | GGNNCC | 1 cut(s) | 272 |
| NsiI | ATGCAT | 1 cut(s) | 294 |
| PciSI | GCTCTTC | 1 cut(s) | 30 |
| PfeI | GAWTC | 3 cut(s) | 62, 338, 356 |
| PkrI | GCNGC | 2 cut(s) | 144, 448 |
| PspN4I | GGNNCC | 1 cut(s) | 272 |
| PspPI | GGNCC | 1 cut(s) | 281 |
| SapI | GCTCTTC | 1 cut(s) | 30 |
| SatI | GCNGC | 2 cut(s) | 143, 447 |
| Sau96I | GGNCC | 1 cut(s) | 281 |
| SduI | GDGCHC | 1 cut(s) | 275 |
| SetI | ASST | 5 cut(s) | 80, 147, 175, 283, 497 |
| SfaNI | GCATC | 2 cut(s) | 115, 242 |
| SinI | GGWCC | 1 cut(s) | 281 |
| Sse9I | AATT | 3 cut(s) | 153, 196, 563 |
| SsiI | CCGC | 3 cut(s) | 275, 429, 446 |
| TaaI | ACNGT | 2 cut(s) | 516, 580 |
| TaiI | ACGT | 1 cut(s) | 497 |
| TaqI | TCGA | 2 cut(s) | 252, 491 |
| TasI | AATT | 3 cut(s) | 153, 196, 563 |
| TauI | GCSGC | 1 cut(s) | 449 |
| TfiI | GAWTC | 3 cut(s) | 62, 338, 356 |
| TscAI | CASTG | 1 cut(s) | 141 |
| TseI | GCWGC | 1 cut(s) | 142 |
| TspDTI | ATGAA | 2 cut(s) | 277, 314 |
| TspRI | CASTG | 1 cut(s) | 141 |
| VpaK11BI | GGWCC | 1 cut(s) | 281 |
| XapI | RAATTY | 1 cut(s) | 563 |
| XmiI | GTMKAC | 1 cut(s) | 522 |
| Zsp2I | ATGCAT | 1 cut(s) | 294 |