Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G66045 AT4G03040 AT5G33330 |
| fragaria_vesca | FvH4_1g08831 FvH4_1g28351 FvH4_6g21511 |
| malus_domestica | MD07G1073700.v1.1 |
| prunus_persica | Prupe.5G022500_v2.0.a1 Prupe.6G105300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0148031 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 109 |
| AclWI | GGATC | 1 cut(s) | 125 |
| AcsI | RAATTY | 1 cut(s) | 242 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 109, 182 |
| AgsI | TTSAA | 1 cut(s) | 172 |
| AjnI | CCWGG | 2 cut(s) | 102, 179 |
| Alw26I | GTCTC | 1 cut(s) | 246 |
| AlwI | GGATC | 1 cut(s) | 125 |
| AoxI | GGCC | 1 cut(s) | 27 |
| ApoI | RAATTY | 1 cut(s) | 242 |
| AspLEI | GCGC | 1 cut(s) | 102 |
| AspS9I | GGNCC | 1 cut(s) | 257 |
| AvaII | GGWCC | 1 cut(s) | 257 |
| BanII | GRGCYC | 1 cut(s) | 9 |
| BccI | CCATC | 1 cut(s) | 279 |
| BceAI | ACGGC | 1 cut(s) | 345 |
| BciT130I | CCWGG | 2 cut(s) | 104, 181 |
| BciVI | GTATCC | 1 cut(s) | 191 |
| BcoDI | GTCTC | 1 cut(s) | 246 |
| BfuI | GTATCC | 1 cut(s) | 191 |
| Bme1390I | CCNGG | 2 cut(s) | 104, 181 |
| Bme18I | GGWCC | 1 cut(s) | 257 |
| BmgT120I | GGNCC | 1 cut(s) | 257 |
| BmrFI | CCNGG | 2 cut(s) | 104, 181 |
| BmsI | GCATC | 1 cut(s) | 356 |
| BsaJI | CCNNGG | 1 cut(s) | 180 |
| BsaWI | WCCGGW | 1 cut(s) | 129 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 109, 182 |
| BseBI | CCWGG | 2 cut(s) | 104, 181 |
| BseDI | CCNNGG | 1 cut(s) | 180 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 109, 182 |
| BshFI | GGCC | 1 cut(s) | 29 |
| BsiSI | CCGG | 1 cut(s) | 130 |
| BslFI | GGGAC | 1 cut(s) | 371 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 109, 182 |
| BsmAI | GTCTC | 1 cut(s) | 246 |
| BsmBI | CGTCTC | 1 cut(s) | 246 |
| BsmFI | GGGAC | 1 cut(s) | 371 |
| BsnI | GGCC | 1 cut(s) | 29 |
| Bsp1286I | GDGCHC | 1 cut(s) | 9 |
| Bsp143I | GATC | 2 cut(s) | 85, 117 |
| BspANI | GGCC | 1 cut(s) | 29 |
| BspPI | GGATC | 1 cut(s) | 125 |
| BssECI | CCNNGG | 1 cut(s) | 180 |
| BssMI | GATC | 2 cut(s) | 85, 117 |
| Bst2UI | CCWGG | 2 cut(s) | 104, 181 |
| Bst4CI | ACNGT | 2 cut(s) | 257, 334 |
| BstDEI | CTNAG | 1 cut(s) | 315 |
| BstHHI | GCGC | 1 cut(s) | 102 |
| BstKTI | GATC | 2 cut(s) | 88, 120 |
| BstMAI | GTCTC | 1 cut(s) | 246 |
| BstMBI | GATC | 2 cut(s) | 85, 117 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 366 |
| BstNI | CCWGG | 2 cut(s) | 104, 181 |
| BstSCI | CCNGG | 2 cut(s) | 102, 179 |
| BsuI | GTATCC | 1 cut(s) | 191 |
| BsuRI | GGCC | 1 cut(s) | 29 |
| BtsIMutI | CAGTG | 1 cut(s) | 253 |
| CfoI | GCGC | 1 cut(s) | 102 |
| Cfr13I | GGNCC | 1 cut(s) | 257 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 229, 264 |
| CviAII | CATG | 2 cut(s) | 212, 372 |
| CviJI | RGCY | 4 cut(s) | 7, 29, 175, 311 |
| CviKI_1 | RGCY | 4 cut(s) | 7, 29, 175, 311 |
| DdeI | CTNAG | 1 cut(s) | 315 |
| DpnI | GATC | 2 cut(s) | 87, 119 |
| DpnII | GATC | 2 cut(s) | 85, 117 |
| Eco147I | AGGCCT | 1 cut(s) | 29 |
| Eco24I | GRGCYC | 1 cut(s) | 9 |
| Eco47I | GGWCC | 1 cut(s) | 257 |
| EcoRII | CCWGG | 2 cut(s) | 102, 179 |
| EcoT38I | GRGCYC | 1 cut(s) | 9 |
| Esp3I | CGTCTC | 1 cut(s) | 246 |
| FaeI | CATG | 2 cut(s) | 215, 375 |
| FaiI | YATR | 7 cut(s) | 20, 33, 110, 137, 213, 299, 373 |
| FaqI | GGGAC | 1 cut(s) | 371 |
| FatI | CATG | 2 cut(s) | 211, 371 |
| FriOI | GRGCYC | 1 cut(s) | 9 |
| GlaI | GCGC | 1 cut(s) | 101 |
| HaeIII | GGCC | 1 cut(s) | 29 |
| HapII | CCGG | 1 cut(s) | 130 |
| HhaI | GCGC | 1 cut(s) | 102 |
| Hin1II | CATG | 2 cut(s) | 215, 375 |
| Hin6I | GCGC | 1 cut(s) | 100 |
| HinP1I | GCGC | 1 cut(s) | 100 |
| HinfI | GANTC | 2 cut(s) | 237, 290 |
| HpaII | CCGG | 1 cut(s) | 130 |
| HpyAV | CCTTC | 1 cut(s) | 186 |
| HpyCH4III | ACNGT | 2 cut(s) | 257, 334 |
| HpyCH4V | TGCA | 3 cut(s) | 232, 284, 327 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 366 |
| HpyF3I | CTNAG | 1 cut(s) | 315 |
| Hsp92II | CATG | 2 cut(s) | 215, 375 |
| HspAI | GCGC | 1 cut(s) | 100 |
| Kzo9I | GATC | 2 cut(s) | 85, 117 |
| LpnPI | CCDG | 6 cut(s) | 89, 116, 143, 144, 166, 193 |
| LweI | GCATC | 1 cut(s) | 356 |
| MalI | GATC | 2 cut(s) | 87, 119 |
| MboI | GATC | 2 cut(s) | 85, 117 |
| MhlI | GDGCHC | 1 cut(s) | 9 |
| MluCI | AATT | 5 cut(s) | 39, 74, 242, 322, 406 |
| MnlI | CCTC | 1 cut(s) | 213 |
| MseI | TTAA | 3 cut(s) | 146, 189, 305 |
| MspI | CCGG | 1 cut(s) | 130 |
| MspR9I | CCNGG | 2 cut(s) | 104, 181 |
| MvaI | CCWGG | 2 cut(s) | 104, 181 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 366 |
| NdeII | GATC | 2 cut(s) | 85, 117 |
| NlaIII | CATG | 2 cut(s) | 215, 375 |
| PceI | AGGCCT | 1 cut(s) | 29 |
| PfeI | GAWTC | 2 cut(s) | 237, 290 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 109 |
| Psp6I | CCWGG | 2 cut(s) | 102, 179 |
| PspGI | CCWGG | 2 cut(s) | 102, 179 |
| PspPI | GGNCC | 1 cut(s) | 257 |
| SaqAI | TTAA | 3 cut(s) | 146, 189, 305 |
| Sau3AI | GATC | 2 cut(s) | 85, 117 |
| Sau96I | GGNCC | 1 cut(s) | 257 |
| ScrFI | CCNGG | 2 cut(s) | 104, 181 |
| SduI | GDGCHC | 1 cut(s) | 9 |
| SetI | ASST | 4 cut(s) | 108, 204, 266, 381 |
| SfaNI | GCATC | 1 cut(s) | 356 |
| SinI | GGWCC | 1 cut(s) | 257 |
| SmlI | CTYRAG | 1 cut(s) | 8 |
| SmoI | CTYRAG | 1 cut(s) | 8 |
| Sse9I | AATT | 5 cut(s) | 39, 74, 242, 322, 406 |
| SseBI | AGGCCT | 1 cut(s) | 29 |
| StuI | AGGCCT | 1 cut(s) | 29 |
| StyD4I | CCNGG | 2 cut(s) | 102, 179 |
| TaaI | ACNGT | 2 cut(s) | 257, 334 |
| TaqI | TCGA | 1 cut(s) | 88 |
| TasI | AATT | 5 cut(s) | 39, 74, 242, 322, 406 |
| TfiI | GAWTC | 2 cut(s) | 237, 290 |
| Tru1I | TTAA | 3 cut(s) | 146, 189, 305 |
| Tru9I | TTAA | 3 cut(s) | 146, 189, 305 |
| TscAI | CASTG | 1 cut(s) | 253 |
| TspDTI | ATGAA | 2 cut(s) | 35, 124 |
| TspRI | CASTG | 1 cut(s) | 253 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 109 |
| VpaK11BI | GGWCC | 1 cut(s) | 257 |
| XapI | RAATTY | 1 cut(s) | 242 |