Nuclear matrix constituent protein 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67230 |
| fragaria_vesca | FvH4_6g45461 FvH4_6g45461 FvH4_6g45461 FvH4_6g45461 FvH4_6g45461 |
| malus_domestica | MD09G1082900.v1.1 |
| prunus_persica | Prupe.3G240800_v2.0.a1 |
| pyrus_communis | pycom09g00940 |
| rosa_chinensis | RchiOBHm_Chr2g0163401 |
| rosa_laevigata | RLG00000021390 |
| rosa_roxburghii | Rroxscaffold_2G00087370 |
| rosa_rugosa | Rorug02G0502200 Rorug02G0502300 |
| rosa_samantha | Rh2AG569300 Rh2BG581400 Rh2CG551200 Rh2DG591300 |
| rosa_wichuraiana | Rw2G047110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 312 |
| Acc36I | ACCTGC | 1 cut(s) | 1491 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2354 |
| AccBSI | CCGCTC | 1 cut(s) | 631 |
| AccI | GTMKAC | 1 cut(s) | 35 |
| AccII | CGCG | 2 cut(s) | 423, 961 |
| AccIII | TCCGGA | 2 cut(s) | 2079, 2376 |
| AciI | CCGC | 7 cut(s) | 343, 631, 2131, 2202, 2977, 2986, 3072 |
| AclI | AACGTT | 1 cut(s) | 28 |
| AclWI | GGATC | 2 cut(s) | 124, 1545 |
| AcoI | YGGCCR | 2 cut(s) | 2271, 2671 |
| AcsI | RAATTY | 3 cut(s) | 165, 443, 2443 |
| AcuI | CTGAAG | 5 cut(s) | 431, 573, 1505, 1562, 2141 |
| AdeI | CACNNNGTG | 1 cut(s) | 1061 |
| AfaI | GTAC | 4 cut(s) | 2226, 2386, 2911, 3133 |
| AfeI | AGCGCT | 1 cut(s) | 258 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 112, 113, 2354 |
| AflII | CTTAAG | 1 cut(s) | 2399 |
| AflIII | ACRYGT | 1 cut(s) | 2259 |
| AgeI | ACCGGT | 1 cut(s) | 86 |
| AhlI | ACTAGT | 1 cut(s) | 1021 |
| AjnI | CCWGG | 1 cut(s) | 2244 |
| AleI | CACNNNNGTG | 1 cut(s) | 3194 |
| Alw21I | GWGCWC | 3 cut(s) | 391, 2223, 2971 |
| Alw26I | GTCTC | 5 cut(s) | 944, 1509, 1645, 1754, 3364 |
| Alw44I | GTGCAC | 1 cut(s) | 387 |
| AlwI | GGATC | 2 cut(s) | 124, 1545 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2354, 3224, 3239 |
| Ama87I | CYCGRG | 4 cut(s) | 606, 1325, 1853, 3350 |
| Aor13HI | TCCGGA | 2 cut(s) | 2079, 2376 |
| Aor51HI | AGCGCT | 1 cut(s) | 258 |
| AoxI | GGCC | 5 cut(s) | 1545, 2271, 2492, 2544, 2671 |
| ApaLI | GTGCAC | 1 cut(s) | 387 |
| ApeKI | GCWGC | 8 cut(s) | 526, 848, 1697, 2065, 2330, 2513, 2639, 3202 |
| ApoI | RAATTY | 3 cut(s) | 165, 443, 2443 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 94, 126 |
| AseI | ATTAAT | 1 cut(s) | 1953 |
| AsiGI | ACCGGT | 1 cut(s) | 86 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 258, 568 |
| AspLEI | GCGC | 4 cut(s) | 259, 313, 425, 961 |
| AspS9I | GGNCC | 2 cut(s) | 1546, 2492 |
| AsuC2I | CCSGG | 2 cut(s) | 3351, 3352 |
| AsuHPI | GGTGA | 9 cut(s) | 112, 292, 1391, 2216, 2572, 2612, 2846, 2950, 3332 |
| AsuII | TTCGAA | 3 cut(s) | 65, 192, 2864 |
| AvaI | CYCGRG | 4 cut(s) | 606, 1325, 1853, 3350 |
| AxyI | CCTNAGG | 1 cut(s) | 3302 |
| BaeGI | GKGCMC | 1 cut(s) | 391 |
| BalI | TGGCCA | 2 cut(s) | 2273, 2673 |
| BanII | GRGCYC | 1 cut(s) | 2223 |
| BbsI | GAAGAC | 2 cut(s) | 206, 882 |
| Bbv12I | GWGCWC | 3 cut(s) | 391, 2223, 2971 |
| BbvCI | CCTCAGC | 1 cut(s) | 1533 |
| BbvI | GCAGC | 8 cut(s) | 513, 835, 1709, 2077, 2317, 2525, 2626, 3214 |
| BccI | CCATC | 7 cut(s) | 1000, 1981, 2503, 2663, 2918, 2933, 3311 |
| BceAI | ACGGC | 1 cut(s) | 3231 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3181, 3215 |
| BciT130I | CCWGG | 1 cut(s) | 2246 |
| BciVI | GTATCC | 1 cut(s) | 3223 |
| BclI | TGATCA | 3 cut(s) | 1630, 2452, 2602 |
| BcnI | CCSGG | 2 cut(s) | 3351, 3352 |
| BcoDI | GTCTC | 5 cut(s) | 944, 1509, 1645, 1754, 3364 |
| BcuI | ACTAGT | 1 cut(s) | 1021 |
| BfaI | CTAG | 9 cut(s) | 75, 872, 1022, 1646, 1724, 2030, 2043, 2660, 3051 |
| BfmI | CTRYAG | 3 cut(s) | 324, 2191, 2640 |
| BfoI | RGCGCY | 1 cut(s) | 260 |
| BfrI | CTTAAG | 1 cut(s) | 2399 |
| BfuAI | ACCTGC | 1 cut(s) | 1491 |
| BfuI | GTATCC | 1 cut(s) | 3223 |
| BglII | AGATCT | 1 cut(s) | 901 |
| BisI | GCNGC | 9 cut(s) | 527, 849, 1698, 2066, 2331, 2514, 2640, 2987, 3203 |
| BlsI | GCNGC | 9 cut(s) | 528, 850, 1699, 2067, 2332, 2515, 2641, 2988, 3204 |
| Bme1390I | CCNGG | 3 cut(s) | 2246, 3351, 3352 |
| BmeT110I | CYCGRG | 4 cut(s) | 606, 1325, 1853, 3350 |
| BmgT120I | GGNCC | 2 cut(s) | 1546, 2492 |
| BmiI | GGNNCC | 2 cut(s) | 85, 2375 |
| BmrFI | CCNGG | 3 cut(s) | 2246, 3351, 3352 |
| BmrI | ACTGGG | 2 cut(s) | 101, 241 |
| BmsI | GCATC | 9 cut(s) | 322, 529, 835, 2385, 2734, 3008, 3161, 3226, 3328 |
| BmuI | ACTGGG | 2 cut(s) | 101, 241 |
| BpiI | GAAGAC | 2 cut(s) | 206, 882 |
| BpmI | CTGGAG | 3 cut(s) | 419, 1229, 3084 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1533, 2338 |
| Bpu14I | TTCGAA | 3 cut(s) | 65, 192, 2864 |
| BpuEI | CTTGAG | 2 cut(s) | 2613, 3120 |
| BpuMI | CCSGG | 2 cut(s) | 3351, 3352 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1239 |
| BsaI | GGTCTC | 1 cut(s) | 1509 |
| BsaJI | CCNNGG | 3 cut(s) | 2172, 2297, 3350 |
| BsaWI | WCCGGW | 4 cut(s) | 86, 2079, 2376, 2960 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1136, 1166, 1433, 1463, 3006, 3036 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 112, 113, 2354 |
| Bse118I | RCCGGY | 1 cut(s) | 86 |
| Bse21I | CCTNAGG | 1 cut(s) | 3302 |
| Bse3DI | GCAATG | 3 cut(s) | 389, 642, 3279 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1239 |
| BseAI | TCCGGA | 2 cut(s) | 2079, 2376 |
| BseBI | CCWGG | 1 cut(s) | 2246 |
| BseDI | CCNNGG | 3 cut(s) | 2172, 2297, 3350 |
| BseGI | GGATG | 4 cut(s) | 1426, 2929, 3322, 3346 |
| BseJI | GATNNNNATC | 1 cut(s) | 1239 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 112, 113, 2354 |
| BseMI | GCAATG | 3 cut(s) | 389, 642, 3279 |
| BseRI | GAGGAG | 6 cut(s) | 1181, 1304, 1454, 1457, 2979, 3131 |
| BseSI | GKGCMC | 1 cut(s) | 391 |
| BseXI | GCAGC | 8 cut(s) | 513, 835, 1709, 2077, 2317, 2525, 2626, 3214 |
| BsgI | GTGCAG | 2 cut(s) | 1519, 3221 |
| Bsh1236I | CGCG | 2 cut(s) | 423, 961 |
| BshFI | GGCC | 5 cut(s) | 1547, 2273, 2494, 2546, 2673 |
| BshTI | ACCGGT | 1 cut(s) | 86 |
| BsiHKAI | GWGCWC | 3 cut(s) | 391, 2223, 2971 |
| BsiHKCI | CYCGRG | 4 cut(s) | 606, 1325, 1853, 3350 |
| BsiSI | CCGG | 5 cut(s) | 87, 2080, 2377, 2961, 3351 |
| BslFI | GGGAC | 2 cut(s) | 2392, 3039 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 112, 113, 2354 |
| BsmAI | GTCTC | 5 cut(s) | 944, 1509, 1645, 1754, 3364 |
| BsmFI | GGGAC | 2 cut(s) | 2392, 3039 |
| BsnI | GGCC | 5 cut(s) | 1547, 2273, 2494, 2546, 2673 |
| Bso31I | GGTCTC | 1 cut(s) | 1509 |
| BsoBI | CYCGRG | 4 cut(s) | 606, 1325, 1853, 3350 |
| Bsp119I | TTCGAA | 3 cut(s) | 65, 192, 2864 |
| Bsp1286I | GDGCHC | 3 cut(s) | 391, 2223, 2971 |
| Bsp13I | TCCGGA | 2 cut(s) | 2079, 2376 |
| Bsp19I | CCATGG | 1 cut(s) | 2172 |
| BspACI | CCGC | 7 cut(s) | 343, 631, 2131, 2202, 2977, 2986, 3072 |
| BspANI | GGCC | 5 cut(s) | 1547, 2273, 2494, 2546, 2673 |
| BspEI | TCCGGA | 2 cut(s) | 2079, 2376 |
| BspFNI | CGCG | 2 cut(s) | 423, 961 |
| BspHI | TCATGA | 1 cut(s) | 1825 |
| BspLI | GGNNCC | 2 cut(s) | 85, 2375 |
| BspMAI | CTGCAG | 2 cut(s) | 2195, 2644 |
| BspMI | ACCTGC | 1 cut(s) | 1491 |
| BspPI | GGATC | 2 cut(s) | 124, 1545 |
| BspQI | GCTCTTC | 2 cut(s) | 1109, 2055 |
| BspT104I | TTCGAA | 3 cut(s) | 65, 192, 2864 |
| BspTI | CTTAAG | 1 cut(s) | 2399 |
| BspTNI | GGTCTC | 1 cut(s) | 1509 |
| BsrBI | CCGCTC | 1 cut(s) | 631 |
| BsrDI | GCAATG | 3 cut(s) | 389, 642, 3279 |
| BsrFI | RCCGGY | 1 cut(s) | 86 |
| BssAI | RCCGGY | 1 cut(s) | 86 |
| BssECI | CCNNGG | 3 cut(s) | 2172, 2297, 3350 |
| BssT1I | CCWWGG | 2 cut(s) | 2172, 2297 |
| Bst2UI | CCWGG | 1 cut(s) | 2246 |
| Bst4CI | ACNGT | 3 cut(s) | 2506, 2600, 3131 |
| Bst6I | CTCTTC | 9 cut(s) | 270, 342, 624, 819, 1109, 1920, 1972, 2055, 2975 |
| BstAFI | CTTAAG | 1 cut(s) | 2399 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 548, 2199 |
| BstBI | TTCGAA | 3 cut(s) | 65, 192, 2864 |
| BstC8I | GCNNGC | 6 cut(s) | 531, 1695, 1902, 2335, 2478, 2827 |
| BstDSI | CCRYGG | 1 cut(s) | 2172 |
| BstEII | GGTNACC | 1 cut(s) | 100 |
| BstF5I | GGATG | 4 cut(s) | 1426, 2929, 3322, 3346 |
| BstFNI | CGCG | 2 cut(s) | 423, 961 |
| BstH2I | RGCGCY | 1 cut(s) | 260 |
| BstHHI | GCGC | 4 cut(s) | 259, 313, 425, 961 |
| BstMAI | GTCTC | 5 cut(s) | 944, 1509, 1645, 1754, 3364 |
| BstNI | CCWGG | 1 cut(s) | 2246 |
| BstNSI | RCATGY | 2 cut(s) | 1996, 2263 |
| BstPI | GGTNACC | 1 cut(s) | 100 |
| BstSCI | CCNGG | 3 cut(s) | 2244, 3349, 3350 |
| BstSFI | CTRYAG | 3 cut(s) | 324, 2191, 2640 |
| BstSLI | GKGCMC | 1 cut(s) | 391 |
| BstUI | CGCG | 2 cut(s) | 423, 961 |
| BstV1I | GCAGC | 8 cut(s) | 513, 835, 1709, 2077, 2317, 2525, 2626, 3214 |
| BstV2I | GAAGAC | 2 cut(s) | 206, 882 |
| BstX2I | RGATCY | 3 cut(s) | 129, 901, 1537 |
| BstYI | RGATCY | 3 cut(s) | 129, 901, 1537 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3302 |
| BsuI | GTATCC | 1 cut(s) | 3223 |
| BsuRI | GGCC | 5 cut(s) | 1547, 2273, 2494, 2546, 2673 |
| BtgI | CCRYGG | 1 cut(s) | 2172 |
| BtgZI | GCGATG | 1 cut(s) | 2952 |
| BtsCI | GGATG | 4 cut(s) | 1426, 2929, 3322, 3346 |
| BtsI | GCAGTG | 1 cut(s) | 3141 |
| BtsIMutI | CAGTG | 2 cut(s) | 3127, 3141 |
| BveI | ACCTGC | 1 cut(s) | 1491 |
| Cac8I | GCNNGC | 6 cut(s) | 531, 1695, 1902, 2335, 2478, 2827 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2354, 3224, 3239 |
| CciI | TCATGA | 1 cut(s) | 1825 |
| CfoI | GCGC | 4 cut(s) | 259, 313, 425, 961 |
| Cfr10I | RCCGGY | 1 cut(s) | 86 |
| Cfr13I | GGNCC | 2 cut(s) | 1546, 2492 |
| Cfr9I | CCCGGG | 1 cut(s) | 3350 |
| Csp6I | GTAC | 4 cut(s) | 2225, 2385, 2910, 3132 |
| CspAI | ACCGGT | 1 cut(s) | 86 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 579, 614 |
| CviQI | GTAC | 4 cut(s) | 2225, 2385, 2910, 3132 |
| DraIII | CACNNNGTG | 1 cut(s) | 1061 |
| EaeI | YGGCCR | 2 cut(s) | 2271, 2671 |
| Eam1104I | CTCTTC | 9 cut(s) | 270, 342, 624, 819, 1109, 1920, 1972, 2055, 2975 |
| EarI | CTCTTC | 9 cut(s) | 270, 342, 624, 819, 1109, 1920, 1972, 2055, 2975 |
| Ecl136II | GAGCTC | 1 cut(s) | 2221 |
| Eco130I | CCWWGG | 2 cut(s) | 2172, 2297 |
| Eco24I | GRGCYC | 1 cut(s) | 2223 |
| Eco31I | GGTCTC | 1 cut(s) | 1509 |
| Eco47III | AGCGCT | 1 cut(s) | 258 |
| Eco53kI | GAGCTC | 1 cut(s) | 2221 |
| Eco57I | CTGAAG | 5 cut(s) | 431, 573, 1505, 1562, 2141 |
| Eco81I | CCTNAGG | 1 cut(s) | 3302 |
| Eco88I | CYCGRG | 4 cut(s) | 606, 1325, 1853, 3350 |
| Eco91I | GGTNACC | 1 cut(s) | 100 |
| EcoICRI | GAGCTC | 1 cut(s) | 2221 |
| EcoO65I | GGTNACC | 1 cut(s) | 100 |
| EcoRII | CCWGG | 1 cut(s) | 2244 |
| EcoT14I | CCWWGG | 2 cut(s) | 2172, 2297 |
| EcoT22I | ATGCAT | 1 cut(s) | 481 |
| EcoT38I | GRGCYC | 1 cut(s) | 2223 |
| ErhI | CCWWGG | 2 cut(s) | 2172, 2297 |
| FaqI | GGGAC | 2 cut(s) | 2392, 3039 |
| FauI | CCCGC | 3 cut(s) | 336, 2124, 3079 |
| FbaI | TGATCA | 3 cut(s) | 1630, 2452, 2602 |
| FblI | GTMKAC | 1 cut(s) | 35 |
| Fnu4HI | GCNGC | 9 cut(s) | 527, 849, 1698, 2066, 2331, 2514, 2640, 2987, 3203 |
| FokI | GGATG | 4 cut(s) | 1433, 2936, 3329, 3333 |
| FriOI | GRGCYC | 1 cut(s) | 2223 |
| Fsp4HI | GCNGC | 9 cut(s) | 527, 849, 1698, 2066, 2331, 2514, 2640, 2987, 3203 |
| FspAI | RTGCGCAY | 1 cut(s) | 312 |
| FspBI | CTAG | 9 cut(s) | 75, 872, 1022, 1646, 1724, 2030, 2043, 2660, 3051 |
| FspI | TGCGCA | 1 cut(s) | 312 |
| GlaI | GCGC | 4 cut(s) | 258, 312, 424, 960 |
| GluI | GCNGC | 9 cut(s) | 527, 849, 1698, 2066, 2331, 2514, 2640, 2987, 3203 |
| GsuI | CTGGAG | 3 cut(s) | 419, 1229, 3084 |
| HaeII | RGCGCY | 1 cut(s) | 260 |
| HaeIII | GGCC | 5 cut(s) | 1547, 2273, 2494, 2546, 2673 |
| HapII | CCGG | 5 cut(s) | 87, 2080, 2377, 2961, 3351 |
| HhaI | GCGC | 4 cut(s) | 259, 313, 425, 961 |
| Hin6I | GCGC | 4 cut(s) | 257, 311, 423, 959 |
| HinP1I | GCGC | 4 cut(s) | 257, 311, 423, 959 |
| HincII | GTYRAC | 3 cut(s) | 465, 1817, 2809 |
| HindII | GTYRAC | 3 cut(s) | 465, 1817, 2809 |
| HindIII | AAGCTT | 5 cut(s) | 363, 1356, 1746, 2751, 3374 |
| HpaII | CCGG | 5 cut(s) | 87, 2080, 2377, 2961, 3351 |
| HphI | GGTGA | 9 cut(s) | 112, 292, 1391, 2216, 2572, 2612, 2846, 2950, 3332 |
| Hpy166II | GTNNAC | 9 cut(s) | 6, 36, 389, 465, 1187, 1817, 2590, 2809, 3289 |
| Hpy8I | GTNNAC | 9 cut(s) | 6, 36, 389, 465, 1187, 1817, 2590, 2809, 3289 |
| Hpy99I | CGWCG | 3 cut(s) | 46, 2521, 3397 |
| HpyCH4III | ACNGT | 3 cut(s) | 2506, 2600, 3131 |
| HpyCH4IV | ACGT | 6 cut(s) | 28, 304, 1183, 2484, 2881, 3395 |
| HpySE526I | ACGT | 6 cut(s) | 28, 304, 1183, 2484, 2881, 3395 |
| HspAI | GCGC | 4 cut(s) | 257, 311, 423, 959 |
| Kpn2I | TCCGGA | 2 cut(s) | 2079, 2376 |
| Ksp22I | TGATCA | 3 cut(s) | 1630, 2452, 2602 |
| LguI | GCTCTTC | 2 cut(s) | 1109, 2055 |
| LmnI | GCTCC | 7 cut(s) | 415, 628, 1081, 1483, 1513, 1720, 2966 |
| Lsp1109I | GCAGC | 8 cut(s) | 513, 835, 1709, 2077, 2317, 2525, 2626, 3214 |
| LweI | GCATC | 9 cut(s) | 322, 529, 835, 2385, 2734, 3008, 3161, 3226, 3328 |
| MaeI | CTAG | 9 cut(s) | 75, 872, 1022, 1646, 1724, 2030, 2043, 2660, 3051 |
| MaeII | ACGT | 6 cut(s) | 28, 304, 1183, 2484, 2881, 3395 |
| MaeIII | GTNAC | 8 cut(s) | 100, 1432, 2350, 2434, 2578, 2927, 2956, 3058 |
| MbiI | CCGCTC | 1 cut(s) | 631 |
| MflI | RGATCY | 3 cut(s) | 129, 901, 1537 |
| MhlI | GDGCHC | 3 cut(s) | 391, 2223, 2971 |
| MlsI | TGGCCA | 2 cut(s) | 2273, 2673 |
| MluNI | TGGCCA | 2 cut(s) | 2273, 2673 |
| MlyI | GAGTC | 4 cut(s) | 1865, 2807, 3215, 3305 |
| MmeI | TCCRAC | 1 cut(s) | 1053 |
| Mox20I | TGGCCA | 2 cut(s) | 2273, 2673 |
| Mph1103I | ATGCAT | 1 cut(s) | 481 |
| MroI | TCCGGA | 2 cut(s) | 2079, 2376 |
| MroXI | GAANNNNTTC | 2 cut(s) | 258, 568 |
| MscI | TGGCCA | 2 cut(s) | 2273, 2673 |
| MseI | TTAA | 7 cut(s) | 911, 1353, 1407, 1478, 1953, 2108, 2400 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3194 |
| Msp20I | TGGCCA | 2 cut(s) | 2273, 2673 |
| MspA1I | CMGCKG | 3 cut(s) | 452, 2131, 2977 |
| MspCI | CTTAAG | 1 cut(s) | 2399 |
| MspI | CCGG | 5 cut(s) | 87, 2080, 2377, 2961, 3351 |
| MspR9I | CCNGG | 3 cut(s) | 2246, 3351, 3352 |
| MvaI | CCWGG | 1 cut(s) | 2246 |
| MvnI | CGCG | 2 cut(s) | 423, 961 |
| NciI | CCSGG | 2 cut(s) | 3351, 3352 |
| NcoI | CCATGG | 1 cut(s) | 2172 |
| NlaIV | GGNNCC | 2 cut(s) | 85, 2375 |
| NmuCI | GTSAC | 3 cut(s) | 100, 2578, 2956 |
| NsbI | TGCGCA | 1 cut(s) | 312 |
| NsiI | ATGCAT | 1 cut(s) | 481 |
| NspI | RCATGY | 2 cut(s) | 1996, 2263 |
| NspV | TTCGAA | 3 cut(s) | 65, 192, 2864 |
| OliI | CACNNNNGTG | 1 cut(s) | 3194 |
| PaeR7I | CTCGAG | 2 cut(s) | 1325, 1853 |
| PagI | TCATGA | 1 cut(s) | 1825 |
| PciI | ACATGT | 1 cut(s) | 2259 |
| PciSI | GCTCTTC | 2 cut(s) | 1109, 2055 |
| PdmI | GAANNNNTTC | 2 cut(s) | 258, 568 |
| PflFI | GACNNNGTC | 1 cut(s) | 881 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2354 |
| PinAI | ACCGGT | 1 cut(s) | 86 |
| PkrI | GCNGC | 9 cut(s) | 528, 850, 1699, 2067, 2332, 2515, 2641, 2988, 3204 |
| PleI | GAGTC | 4 cut(s) | 1864, 2807, 3215, 3305 |
| PpsI | GAGTC | 4 cut(s) | 1864, 2807, 3215, 3305 |
| PscI | ACATGT | 1 cut(s) | 2259 |
| PshBI | ATTAAT | 1 cut(s) | 1953 |
| Psp124BI | GAGCTC | 1 cut(s) | 2223 |
| Psp1406I | AACGTT | 1 cut(s) | 28 |
| Psp6I | CCWGG | 1 cut(s) | 2244 |
| PspEI | GGTNACC | 1 cut(s) | 100 |
| PspGI | CCWGG | 1 cut(s) | 2244 |
| PspN4I | GGNNCC | 2 cut(s) | 85, 2375 |
| PspPI | GGNCC | 2 cut(s) | 1546, 2492 |
| PspXI | VCTCGAGB | 2 cut(s) | 1325, 1853 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 553, 585, 2896, 2928 |
| PstI | CTGCAG | 2 cut(s) | 2195, 2644 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2354, 3224, 3239 |
| PsuI | RGATCY | 3 cut(s) | 129, 901, 1537 |
| PsyI | GACNNNGTC | 1 cut(s) | 881 |
| PvuII | CAGCTG | 1 cut(s) | 452 |
| RsaI | GTAC | 4 cut(s) | 2226, 2386, 2911, 3133 |
| RsaNI | GTAC | 4 cut(s) | 2225, 2385, 2910, 3132 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3194 |
| SacI | GAGCTC | 1 cut(s) | 2223 |
| SapI | GCTCTTC | 2 cut(s) | 1109, 2055 |
| SaqAI | TTAA | 7 cut(s) | 911, 1353, 1407, 1478, 1953, 2108, 2400 |
| SatI | GCNGC | 9 cut(s) | 527, 849, 1698, 2066, 2331, 2514, 2640, 2987, 3203 |
| Sau96I | GGNCC | 2 cut(s) | 1546, 2492 |
| SchI | GAGTC | 4 cut(s) | 1865, 2807, 3215, 3305 |
| ScrFI | CCNGG | 3 cut(s) | 2246, 3351, 3352 |
| SduI | GDGCHC | 3 cut(s) | 391, 2223, 2971 |
| SfaNI | GCATC | 9 cut(s) | 322, 529, 835, 2385, 2734, 3008, 3161, 3226, 3328 |
| SfcI | CTRYAG | 3 cut(s) | 324, 2191, 2640 |
| Sfr274I | CTCGAG | 2 cut(s) | 1325, 1853 |
| SfuI | TTCGAA | 3 cut(s) | 65, 192, 2864 |
| SlaI | CTCGAG | 2 cut(s) | 1325, 1853 |
| SmaI | CCCGGG | 1 cut(s) | 3352 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3194 |
| SmlI | CTYRAG | 5 cut(s) | 1325, 1853, 2399, 2628, 3135 |
| SmoI | CTYRAG | 5 cut(s) | 1325, 1853, 2399, 2628, 3135 |
| SpeI | ACTAGT | 1 cut(s) | 1021 |
| SsiI | CCGC | 7 cut(s) | 343, 631, 2131, 2202, 2977, 2986, 3072 |
| SspI | AATATT | 2 cut(s) | 153, 1951 |
| SspMI | CTAG | 9 cut(s) | 75, 872, 1022, 1646, 1724, 2030, 2043, 2660, 3051 |
| SstI | GAGCTC | 1 cut(s) | 2223 |
| StyD4I | CCNGG | 3 cut(s) | 2244, 3349, 3350 |
| StyI | CCWWGG | 2 cut(s) | 2172, 2297 |
| TaaI | ACNGT | 3 cut(s) | 2506, 2600, 3131 |
| TaiI | ACGT | 6 cut(s) | 31, 307, 1186, 2487, 2884, 3398 |
| TaqI | TCGA | 8 cut(s) | 65, 138, 192, 890, 1326, 1854, 2574, 2864 |
| TatI | WGTACW | 3 cut(s) | 2384, 2909, 3131 |
| TauI | GCSGC | 1 cut(s) | 2989 |
| Tru1I | TTAA | 7 cut(s) | 911, 1353, 1407, 1478, 1953, 2108, 2400 |
| Tru9I | TTAA | 7 cut(s) | 911, 1353, 1407, 1478, 1953, 2108, 2400 |
| TscAI | CASTG | 2 cut(s) | 3134, 3148 |
| TseFI | GTSAC | 3 cut(s) | 100, 2578, 2956 |
| TseI | GCWGC | 8 cut(s) | 526, 848, 1697, 2065, 2330, 2513, 2639, 3202 |
| Tsp45I | GTSAC | 3 cut(s) | 100, 2578, 2956 |
| TspGWI | ACGGA | 1 cut(s) | 2890 |
| TspMI | CCCGGG | 1 cut(s) | 3350 |
| TspRI | CASTG | 2 cut(s) | 3134, 3148 |
| Tth111I | GACNNNGTC | 1 cut(s) | 881 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2354 |
| Vha464I | CTTAAG | 1 cut(s) | 2399 |
| VneI | GTGCAC | 1 cut(s) | 387 |
| VspI | ATTAAT | 1 cut(s) | 1953 |
| XapI | RAATTY | 3 cut(s) | 165, 443, 2443 |
| XbaI | TCTAGA | 1 cut(s) | 2659 |
| XceI | RCATGY | 2 cut(s) | 1996, 2263 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1003 |
| XhoI | CTCGAG | 2 cut(s) | 1325, 1853 |
| XmaI | CCCGGG | 1 cut(s) | 3350 |
| XmiI | GTMKAC | 1 cut(s) | 35 |
| XmnI | GAANNNNTTC | 2 cut(s) | 258, 568 |
| XspI | CTAG | 9 cut(s) | 75, 872, 1022, 1646, 1724, 2030, 2043, 2660, 3051 |
| Zsp2I | ATGCAT | 1 cut(s) | 481 |