Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0012184

Physical Location & Seq

Genomic Coordinates Reverse (-)

5804507 .. 5810616

Gene Structure 6110 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1082900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3594 bp

ATGTTTACGCCGCAACGGTGGTCGGGTTGGTCTCGAACGCCCAGAACCGGGGCGGAGAAGACCGGAACCGGGTCCGGTGCTCCGAACTCTAACTCCGGGGATGGGATCGTTGCGAAGGGCAAAGGTGTTAACTTGTTTGAACCCGCGACGCCAGTTTCGGGTTCCATGCTTGAGAATGTGGGGAAGATGTTAGTGGAATCCGGTGGCGCAGCCACTGACCGCGAAGTCTTGGCTCACAGGGTTTCGGAGCTCGAAAATGAGCTTTTCGAATACCAGTACAATATGGGTCTGCTCTTGATTGAGAAGAAGGAGTGGACTTCTAAGTATGAAGAAGTCAGGCAGTCATTAAACGAAGCAAAAGAGGCCGTCAGAAGAGAACAATCAGCCCATTTGATTGCAATGACAGAAATCGAAAAGCGAGAGGAGAATCTGAGGAAGGCCTTGGGGGTTGAGAAACAATGTGTGCATGATCTAGAGAAGGCTCTACATGAGATTCGTTCGGAAAATGCAGAAATTAAGTTTACTGCTGAATCAAAGTTGGCCGAGGCAAATGCTTTGGTTGCTAGTGTAGAAGAGAAATCATTGGAGCTAGAGGCAAAGATGCATGCTGCTGATGCCAAGCTTGCTGAAGTGAACCGAAAAAGTTCAGAAATTGAGAGGAAATTGAAAGACTTAGAGTCTCGAGAAAGTGCAATTCGAAGAGATCGGTTATCCTTTTGTTCAGAACAGGAAGCACATGAGACTTCTTTGTCCAAGCGGAGGGAGGACTTGCTAGAATGGGAAAGGAAATTGCAAGAGGGAGAAGAGAGGCTAGCCAAGGGCCAAAGAATTCTCAACCAAAGAGAGGAGAGGGCAAATGAAATTGACAAGAGTTTTAAGCAGAAAGAGAAGGATCTGGAAGATGCTCAGAGGAAGATCGATGCAACTAATGAGACATTGAAAAGGAAAGAAGATGATATAAGCAACAGGCTAGCAAATCTAACTCTGAAGGAGAAGGAATATGATGGTCTGAGAATGAACCTCGAGATGAAGGAGAAGGAGTTACTTGTATGGGAAGAAAATCTCAATGCTAAAGAAAAAGTTGAGATCCAAAAGCTTATTGATGAACACAATGCCATGCTGGATGCAAAGAAATGTGAATTTGAGTTGGAAATTGATGAAAGGAGAAAATCCTTGGATGATGAATTGAGAAACAGGGCAGTTGATGTGGAGAAAAAGGAATCTGAAATCAATCACTTGGAGGAGAAAATTGCAAAACGGGAGCAGGCTCTGGAAAAGAAAGCTGAAAAACTCAGGGAGAAAGAGAATGACTTTGAAACAAAAGTGAAATCCCTGAAGGAAAAGGAGAAGTCTGTTAAGTCTGAGGAGAAGAACTTGGAAAGCGAGAAGAAGCAACTAGTTAATGATAAAGAGGATTTGGTTAGGCTCCTGGCTGAAGTTGAGAAGATCAGGGCTGATAATGAGGAACAGCTGCAGAAGATTAGTGAGCAGAGGGATCTGCTCAAAGTAACTGAAGAAGAAAGGTCAGATTATCTCCGCTTGCAGTCAGAATTAAAACAGGAAATTGACAAGTACAGGCAACAGAAAGAACTGCTCCTGAAGGAAGCTGAAGACTTGAAGCAGCAAAAGGAGCTTTTTGAGAGAGAGTGGGAGGAACTGGATGACAAAAGAGTTGAGATTGAGAAAGAACTAAAGAATGTGGGTGAACAGAAGGAAGAAATAGAAAAATGGAAACATGCTGAAGAAGAAAGGTTGAAAAATGAAAGGGTGGCGGCACAACACTTTATAGAAATGGAGCAGGGGGATCTTAAGCTGGCCAGGGAGTCATTTGCAGCCCATATGGAACATGAGAAGTCAGAATTAGCTGAGAAAGCTCAAAGTGAGAGAAGCCAAATGCTTCATGAATTTGAGACACGGAAAAGGGAGCTTGAAACTGATATGCAGAATCGGCTGGAGGATATGGAAAAACCCTTGCGTGAAAGAGAAAAATCTTTTGCAGAAGAACAAGAAAGAGAACTAGACAATGTTAATTACTTGAGAGAGGTAGCTAGAAGGGAAATGGAAGAAATCAAAGTTGAAAGGCTTAAAATAGAAAAGGAAAGACAAGAAGCTGATGCAAATAAGGAACATCTTGAAAGGCAACAAGTTGAGATAAGAAAAGACATTGATGGACTTCTTGGCCTTAGCCGGAAACTCAGAGATCAGCGTGAGCAGTTTATTAAGGAGAGAGAATCCTTTATTTCATTTATTGAGAAACTCAAGAGTTGCACAAATTGTGGTGAAATGATCTTGGAGTTTGTGCAGCTACGACCTTTAGCTGAAATTGAAAATGCAGAGGTCATTCCCCAGCCGAGATTGAGTGATGACTATTTGAAGGGAGGTCTCAATGAAAATCTGGCTGCTTCTAAGAGGCAAAAAAATGAGATGTCTCCTGCTGCTGAACCAAGGTCTCCAGTTTCTGGTGGAACTATATCTTGGCTTCGTAAATGCACCACAAAGATTTTTAGTCTCTCCCCAGGGAAAAAGATCGAGTTTGGTGCTCCTCAAAATTCTCCAAACGAGGCATCATTTCCGGGTGAGCAAAATGAAGAGCCATCCGAAAGAGTGCATGGCACTGAAAACGAGGCTGAGATCTCTTTAGGAGTTGCAAGTGATTCTTTTGATGTCCAGAGGATTCAATCTGACAACAGCATCAGAGAGGTCGAAGTTGTTCAATATCCTTCACATGATGAGCATAGCAACATGAACAGTGAGGCACCACCTGATGTCCCAGAAGATTCTCAGCCTTCTGATTTGAAGGGTAGTCGTCGAAAGCCAAGTAGGAGTCGCAGGCCTGCAGTAACCAGAGCTCGCACTAAGAAAGCAGTTGTCAAAGATGCTAAGGCTATACTTGGGGAGGCTGACAGTGAATATGCAAACGGTACTGCGGAGGATTCCGTCGACATGCAAAGTGAAAGCCTTGGTGGTTCCAGTCTTGCTGACAAAAGAACAACAAGAAATGGACGGAAGCGCGGCCGCGCTGAGACATCTCAGATTGCTCTGAGTGATGGTGGTGATAGTGAAAGACTTTCTGACATTGTCATGGGTTCCCAGCGCAAGAAGAAGCGAGAAAGAGTTCTTCCAGCTGAACAAGTTCCAGGGGAAAGTCGGTACAATCTCCGGCGACCGAAAACCGGAGTCAGAGGTGCTGCTGCAACTGCCTCCCGTGACCTTGTCAAAGAAAATGAGGAGGTTGATGGAGCTATAGGGACGGAGGCAGTGATTCATTACTCCAAAGCTGCTCCTGCTACTTCAATGGGAGTTGCTAGCGAGAATGGTGGAAGCTCACACTTTGTGCGGTGCGAGACTCTTGCAAACACGCAAGATGGTGATGCAGATGCAGTGAAAAATCAGGAAGAAAATCCAGTAGCGAGTGAAGAGGTGAATGGTTCAACAGCAGGGGGTCAGGAGTATGTTGAAGGAGATGAGTATAGGAGTGAATCCCGGGAAGCTACTCCCATTGAAGAAGATGATGACGATGATGAAGAAGAATCATCTGAACATCCTGGTCAAGCCTCAATAGGAAAGAAGCTCTGGACCTTCCTCACAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000229 GO:0000785 GO:0000789 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005652 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0006996 GO:0006997 GO:0008150 GO:0009987 GO:0012505 GO:0016043 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032535 GO:0034399 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0065007 GO:0065008 GO:0070013 GO:0071840 GO:0090066 GO:0097298

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1198

Amino Acids

137.01

Weight (kDa)

5.11

Isoelectric Point (pI)

54.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012184)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67230
fragaria_vesca	FvH4_6g45461 FvH4_6g45461 FvH4_6g45461 FvH4_6g45461 FvH4_6g45461
malus_domestica	MD09G1082900.v1.1
prunus_persica	Prupe.3G240800_v2.0.a1
pyrus_communis	pycom09g00940
rosa_chinensis	RchiOBHm_Chr2g0163401
rosa_laevigata	RLG00000021390
rosa_roxburghii	Rroxscaffold_2G00087370
rosa_rugosa	Rorug02G0502200 Rorug02G0502300
rosa_samantha	Rh2AG569300 Rh2BG581400 Rh2CG551200 Rh2DG591300
rosa_wichuraiana	Rw2G047110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	224, 748
AccB1I	GGYRCC	1 cut(s)	2755
AccB7I	CCANNNNNTGG	1 cut(s)	2459
AccI	GTMKAC	1 cut(s)	2940
AccII	CGCG	4 cut(s)	146, 222, 3012, 3018
AclWI	GGATC	5 cut(s)	113, 900, 1081, 1503, 1812
AcoI	YGGCCR	3 cut(s)	540, 1815, 3013
AcsI	RAATTY	4 cut(s)	828, 1139, 1904, 2548
AcuI	CTGAAG	8 cut(s)	648, 1007, 1355, 1455, 1533, 1619, 1629, 1761
AcyI	GRCGYC	1 cut(s)	149
AdeI	CACNNNGTG	1 cut(s)	3334
AfaI	GTAC	4 cut(s)	278, 1574, 2923, 3152
AfiI	CCNNNNNNNGG	9 cut(s)	47, 48, 69, 102, 158, 759, 844, 2459, 3173
AflII	CTTAAG	1 cut(s)	1808
AhdI	GACNNNNNGTC	1 cut(s)	676
AhlI	ACTAGT	1 cut(s)	1396
AjnI	CCWGG	5 cut(s)	1428, 1817, 2515, 3136, 3544
AjuI	GAANNNNNNNTTGG	2 cut(s)	2458, 2490
AloI	GAACNNNNNNTCC	2 cut(s)	77, 109
Alw21I	GWGCWC	4 cut(s)	82, 252, 2542, 2851
AlwI	GGATC	5 cut(s)	113, 900, 1081, 1503, 1812
AlwNI	CAGNNNCTG	3 cut(s)	215, 1270, 2459
Ama87I	CYCGRG	3 cut(s)	681, 1022, 3483
AoxI	GGCC	8 cut(s)	363, 438, 540, 820, 1815, 2179, 2831, 3013
ApoI	RAATTY	4 cut(s)	828, 1139, 1904, 2548
ArsI	GACNNNNNNTTYG	2 cut(s)	139, 171
Asp700I	GAANNNNTTC	4 cut(s)	643, 2709, 3114, 3132
AspLEI	GCGC	4 cut(s)	209, 3012, 3020, 3096
AspS9I	GGNCC	3 cut(s)	72, 820, 3576
AsuC2I	CCSGG	6 cut(s)	49, 70, 97, 2574, 3484, 3485
AsuHPI	GGTGA	6 cut(s)	1715, 2291, 2588, 3065, 3380, 3433
AsuII	TTCGAA	2 cut(s)	267, 697
AsuNHI	GCTAGC	3 cut(s)	811, 970, 3305
AvaI	CYCGRG	3 cut(s)	681, 1022, 3483
AvaII	GGWCC	2 cut(s)	72, 3576
BalI	TGGCCA	1 cut(s)	1817
BanI	GGYRCC	1 cut(s)	2755
BanII	GRGCYC	2 cut(s)	252, 2851
BbsI	GAAGAC	2 cut(s)	65, 1617
Bbv12I	GWGCWC	4 cut(s)	82, 252, 2542, 2851
BccI	CCATC	7 cut(s)	95, 998, 2162, 2602, 3041, 3230, 3359
BceAI	ACGGC	1 cut(s)	350
BcgI	CGANNNNNNTGC	6 cut(s)	533, 567, 2519, 2553, 3332, 3366
BciT130I	CCWGG	5 cut(s)	1430, 1819, 2517, 3138, 3546
BcnI	CCSGG	6 cut(s)	49, 70, 97, 2574, 3484, 3485
BcuI	ACTAGT	1 cut(s)	1396
BfmI	CTRYAG	3 cut(s)	1472, 2835, 3243
BfrI	CTTAAG	1 cut(s)	1808
BglII	AGATCT	1 cut(s)	2631
Bme18I	GGWCC	2 cut(s)	72, 3576
BmeRI	GACNNNNNGTC	1 cut(s)	676
BmeT110I	CYCGRG	3 cut(s)	681, 1022, 3483
BmgT120I	GGNCC	3 cut(s)	72, 820, 3576
BmiI	GGNNCC	7 cut(s)	67, 73, 163, 1427, 2757, 2968, 3088
BmtI	GCTAGC	3 cut(s)	815, 974, 3309
BpiI	GAAGAC	2 cut(s)	65, 1617
BpmI	CTGGAG	2 cut(s)	1973, 2436
Bpu10I	CCTNAGC	2 cut(s)	2183, 2880
Bpu14I	TTCGAA	2 cut(s)	267, 697
BpuEI	CTTGAG	3 cut(s)	191, 2056, 2243
BpuMI	CCSGG	6 cut(s)	49, 70, 97, 2574, 3484, 3485
Bsa29I	ATCGAT	1 cut(s)	918
BsaHI	GRCGYC	1 cut(s)	149
BsaI	GGTCTC	3 cut(s)	36, 2387, 2454
BsaWI	WCCGGW	4 cut(s)	62, 74, 200, 3173
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 1025, 1055
Bsc4I	CCNNNNNNNGG	9 cut(s)	47, 48, 69, 102, 158, 759, 844, 2459, 3173
Bse1I	ACTGG	6 cut(s)	152, 274, 1662, 2453, 2970, 3404
Bse3DI	GCAATG	1 cut(s)	405
BseBI	CCWGG	5 cut(s)	1430, 1819, 2517, 3138, 3546
BseCI	ATCGAT	1 cut(s)	918
BseGI	GGATG	6 cut(s)	106, 1129, 1183, 1666, 2594, 3541
BseLI	CCNNNNNNNGG	9 cut(s)	47, 48, 69, 102, 158, 759, 844, 2459, 3173
BseMI	GCAATG	1 cut(s)	405
BseNI	ACTGG	6 cut(s)	152, 274, 1662, 2453, 2970, 3404
BseRI	GAGGAG	6 cut(s)	437, 860, 1256, 1379, 2532, 3242
BseX3I	CGGCCG	1 cut(s)	3013
BseYI	CCCAGC	2 cut(s)	2346, 3090
BsgI	GTGCAG	1 cut(s)	2321
Bsh1236I	CGCG	4 cut(s)	146, 222, 3012, 3018
Bsh1285I	CGRYCG	2 cut(s)	3016, 3167
BshFI	GGCC	8 cut(s)	365, 440, 542, 822, 1817, 2181, 2833, 3015
BshNI	GGYRCC	1 cut(s)	2755
BshVI	ATCGAT	1 cut(s)	918
BsiEI	CGRYCG	2 cut(s)	3016, 3167
BsiHKAI	GWGCWC	4 cut(s)	82, 252, 2542, 2851
BsiHKCI	CYCGRG	3 cut(s)	681, 1022, 3483
BslFI	GGGAC	2 cut(s)	2753, 3262
BslI	CCNNNNNNNGG	9 cut(s)	47, 48, 69, 102, 158, 759, 844, 2459, 3173
BsmFI	GGGAC	2 cut(s)	2753, 3262
BsnI	GGCC	8 cut(s)	365, 440, 542, 822, 1817, 2181, 2833, 3015
Bso31I	GGTCTC	3 cut(s)	36, 2387, 2454
BsoBI	CYCGRG	3 cut(s)	681, 1022, 3483
Bsp119I	TTCGAA	2 cut(s)	267, 697
Bsp1286I	GDGCHC	4 cut(s)	82, 252, 2542, 2851
BspANI	GGCC	8 cut(s)	365, 440, 542, 822, 1817, 2181, 2833, 3015
BspDI	ATCGAT	1 cut(s)	918
BspFNI	CGCG	4 cut(s)	146, 222, 3012, 3018
BspHI	TCATGA	1 cut(s)	1900
BspLI	GGNNCC	7 cut(s)	67, 73, 163, 1427, 2757, 2968, 3088
BspMAI	CTGCAG	2 cut(s)	1476, 2839
BspOI	GCTAGC	3 cut(s)	815, 974, 3309
BspPI	GGATC	5 cut(s)	113, 900, 1081, 1503, 1812
BspQI	GCTCTTC	1 cut(s)	2583
BspT104I	TTCGAA	2 cut(s)	267, 697
BspT107I	GGYRCC	1 cut(s)	2755
BspTI	CTTAAG	1 cut(s)	1808
BspTNI	GGTCTC	3 cut(s)	36, 2387, 2454
BsrDI	GCAATG	1 cut(s)	405
BsrI	ACTGG	6 cut(s)	152, 274, 1662, 2453, 2970, 3404
BssNI	GRCGYC	1 cut(s)	149
BssT1I	CCWWGG	5 cut(s)	441, 816, 1173, 2444, 2959
Bst2UI	CCWGG	5 cut(s)	1430, 1819, 2517, 3138, 3546
Bst4CI	ACNGT	4 cut(s)	18, 2750, 2906, 2921
Bst6I	CTCTTC	6 cut(s)	367, 567, 694, 798, 2583, 3411
BstACI	GRCGYC	1 cut(s)	149
BstAFI	CTTAAG	1 cut(s)	1808
BstBI	TTCGAA	2 cut(s)	267, 697
BstF5I	GGATG	6 cut(s)	106, 1129, 1183, 1666, 2594, 3541
BstFNI	CGCG	4 cut(s)	146, 222, 3012, 3018
BstHHI	GCGC	4 cut(s)	209, 3012, 3020, 3096
BstMCI	CGRYCG	2 cut(s)	3016, 3167
BstMWI	GCNNNNNNNGC	9 cut(s)	362, 560, 614, 623, 1630, 1871, 1948, 3197, 3284
BstNI	CCWGG	5 cut(s)	1430, 1819, 2517, 3138, 3546
BstNSI	RCATGY	3 cut(s)	608, 1739, 2947
BstSFI	CTRYAG	3 cut(s)	1472, 2835, 3243
BstUI	CGCG	4 cut(s)	146, 222, 3012, 3018
BstV2I	GAAGAC	2 cut(s)	65, 1617
BstX2I	RGATCY	5 cut(s)	892, 1086, 1495, 1804, 2631
BstYI	RGATCY	5 cut(s)	892, 1086, 1495, 1804, 2631
BstZI	CGGCCG	1 cut(s)	3013
Bsu15I	ATCGAT	1 cut(s)	918
BsuRI	GGCC	8 cut(s)	365, 440, 542, 822, 1817, 2181, 2833, 3015
BsuTUI	ATCGAT	1 cut(s)	918
BtsCI	GGATG	6 cut(s)	106, 1129, 1183, 1666, 2594, 3541
BtsI	GCAGTG	2 cut(s)	3264, 3387
BtsIMutI	CAGTG	6 cut(s)	213, 2613, 2755, 2911, 3264, 3387
CaiI	CAGNNNCTG	3 cut(s)	215, 1270, 2459
CciI	TCATGA	1 cut(s)	1900
CciNI	GCGGCCGC	1 cut(s)	3013
CfoI	GCGC	4 cut(s)	209, 3012, 3020, 3096
Cfr13I	GGNCC	3 cut(s)	72, 820, 3576
Cfr9I	CCCGGG	1 cut(s)	3483
ClaI	ATCGAT	1 cut(s)	918
CseI	GACGC	1 cut(s)	157
Csp6I	GTAC	4 cut(s)	277, 1573, 2922, 3151
CviQI	GTAC	4 cut(s)	277, 1573, 2922, 3151
DraIII	CACNNNGTG	1 cut(s)	3334
DrdI	GACNNNNNNGTC	2 cut(s)	224, 748
DriI	GACNNNNNGTC	1 cut(s)	676
DseDI	GACNNNNNNGTC	2 cut(s)	224, 748
EaeI	YGGCCR	3 cut(s)	540, 1815, 3013
EagI	CGGCCG	1 cut(s)	3013
Eam1104I	CTCTTC	6 cut(s)	367, 567, 694, 798, 2583, 3411
Eam1105I	GACNNNNNGTC	1 cut(s)	676
EarI	CTCTTC	6 cut(s)	367, 567, 694, 798, 2583, 3411
EciI	GGCGGA	1 cut(s)	68
Ecl136II	GAGCTC	2 cut(s)	250, 2849
EclXI	CGGCCG	1 cut(s)	3013
Eco130I	CCWWGG	5 cut(s)	441, 816, 1173, 2444, 2959
Eco147I	AGGCCT	2 cut(s)	440, 2833
Eco24I	GRGCYC	2 cut(s)	252, 2851
Eco31I	GGTCTC	3 cut(s)	36, 2387, 2454
Eco47I	GGWCC	2 cut(s)	72, 3576
Eco52I	CGGCCG	1 cut(s)	3013
Eco53kI	GAGCTC	2 cut(s)	250, 2849
Eco57I	CTGAAG	8 cut(s)	648, 1007, 1355, 1455, 1533, 1619, 1629, 1761
Eco88I	CYCGRG	3 cut(s)	681, 1022, 3483
EcoICRI	GAGCTC	2 cut(s)	250, 2849
EcoRI	GAATTC	1 cut(s)	828
EcoRII	CCWGG	5 cut(s)	1428, 1817, 2515, 3136, 3544
EcoT14I	CCWWGG	5 cut(s)	441, 816, 1173, 2444, 2959
EcoT22I	ATGCAT	1 cut(s)	606
EcoT38I	GRGCYC	2 cut(s)	252, 2851
ErhI	CCWWGG	5 cut(s)	441, 816, 1173, 2444, 2959
FalI	AAGNNNNNCTT	2 cut(s)	2641, 2673
FaqI	GGGAC	2 cut(s)	2753, 3262
FauI	CCCGC	1 cut(s)	151
FauNDI	CATATG	1 cut(s)	1839
FblI	GTMKAC	1 cut(s)	2940
FokI	GGATG	6 cut(s)	113, 1136, 1190, 1673, 2581, 3528
FriOI	GRGCYC	2 cut(s)	252, 2851
GlaI	GCGC	4 cut(s)	208, 3011, 3019, 3095
GsaI	CCCAGC	2 cut(s)	2350, 3094
GsuI	CTGGAG	2 cut(s)	1973, 2436
HaeIII	GGCC	8 cut(s)	365, 440, 542, 822, 1817, 2181, 2833, 3015
HgaI	GACGC	1 cut(s)	157
HhaI	GCGC	4 cut(s)	209, 3012, 3020, 3096
Hin1I	GRCGYC	1 cut(s)	149
Hin6I	GCGC	4 cut(s)	207, 3010, 3018, 3094
HinP1I	GCGC	4 cut(s)	207, 3010, 3018, 3094
HincII	GTYRAC	2 cut(s)	130, 2941
HindII	GTYRAC	2 cut(s)	130, 2941
HindIII	AAGCTT	2 cut(s)	620, 1094
HpaI	GTTAAC	1 cut(s)	130
HphI	GGTGA	6 cut(s)	1715, 2291, 2588, 3065, 3380, 3433
Hpy166II	GTNNAC	7 cut(s)	6, 130, 315, 522, 634, 1706, 2941
Hpy8I	GTNNAC	7 cut(s)	6, 130, 315, 522, 634, 1706, 2941
Hpy99I	CGWCG	3 cut(s)	151, 2811, 2942
HpyCH4III	ACNGT	4 cut(s)	18, 2750, 2906, 2921
HpyF10VI	GCNNNNNNNGC	9 cut(s)	362, 560, 614, 623, 1630, 1871, 1948, 3197, 3284
Hsp92I	GRCGYC	1 cut(s)	149
HspAI	GCGC	4 cut(s)	207, 3010, 3018, 3094
KspAI	GTTAAC	1 cut(s)	130
LguI	GCTCTTC	1 cut(s)	2583
MaeIII	GTNAC	4 cut(s)	1041, 1507, 2839, 3206
MflI	RGATCY	5 cut(s)	892, 1086, 1495, 1804, 2631
MhlI	GDGCHC	4 cut(s)	82, 252, 2542, 2851
MlsI	TGGCCA	1 cut(s)	1817
MluNI	TGGCCA	1 cut(s)	1817
MlyI	GAGTC	5 cut(s)	686, 1832, 2833, 3186, 3340
MmeI	TCCRAC	1 cut(s)	1128
Mox20I	TGGCCA	1 cut(s)	1817
Mph1103I	ATGCAT	1 cut(s)	606
MroXI	GAANNNNTTC	4 cut(s)	643, 2709, 3114, 3132
MscI	TGGCCA	1 cut(s)	1817
MslI	CAYNNNNRTG	1 cut(s)	3080
Msp20I	TGGCCA	1 cut(s)	1817
MspA1I	CMGCKG	2 cut(s)	1471, 3125
MspCI	CTTAAG	1 cut(s)	1808
MvaI	CCWGG	5 cut(s)	1430, 1819, 2517, 3138, 3546
MvnI	CGCG	4 cut(s)	146, 222, 3012, 3018
MwoI	GCNNNNNNNGC	9 cut(s)	362, 560, 614, 623, 1630, 1871, 1948, 3197, 3284
NciI	CCSGG	6 cut(s)	49, 70, 97, 2574, 3484, 3485
NdeI	CATATG	1 cut(s)	1839
NheI	GCTAGC	3 cut(s)	811, 970, 3305
NlaIV	GGNNCC	7 cut(s)	67, 73, 163, 1427, 2757, 2968, 3088
NmeAIII	GCCGAG	2 cut(s)	568, 2376
NmuCI	GTSAC	1 cut(s)	3206
NotI	GCGGCCGC	1 cut(s)	3013
NsiI	ATGCAT	1 cut(s)	606
NspI	RCATGY	3 cut(s)	608, 1739, 2947
NspV	TTCGAA	2 cut(s)	267, 697
PaeI	GCATGC	1 cut(s)	608
PaeR7I	CTCGAG	2 cut(s)	681, 1022
PagI	TCATGA	1 cut(s)	1900
PasI	CCCWGGG	1 cut(s)	2516
PceI	AGGCCT	2 cut(s)	440, 2833
PciSI	GCTCTTC	1 cut(s)	2583
PdmI	GAANNNNTTC	4 cut(s)	643, 2709, 3114, 3132
PflFI	GACNNNGTC	2 cut(s)	3077, 3212
PflMI	CCANNNNNTGG	1 cut(s)	2459
PleI	GAGTC	5 cut(s)	685, 1831, 2832, 3185, 3340
PpsI	GAGTC	5 cut(s)	685, 1831, 2832, 3185, 3340
Psp124BI	GAGCTC	2 cut(s)	252, 2851
Psp6I	CCWGG	5 cut(s)	1428, 1817, 2515, 3136, 3544
PspFI	CCCAGC	2 cut(s)	2346, 3090
PspGI	CCWGG	5 cut(s)	1428, 1817, 2515, 3136, 3544
PspN4I	GGNNCC	7 cut(s)	67, 73, 163, 1427, 2757, 2968, 3088
PspPI	GGNCC	3 cut(s)	72, 820, 3576
PstI	CTGCAG	2 cut(s)	1476, 2839
PstNI	CAGNNNCTG	3 cut(s)	215, 1270, 2459
PsuI	RGATCY	5 cut(s)	892, 1086, 1495, 1804, 2631
PsyI	GACNNNGTC	2 cut(s)	3077, 3212
PvuII	CAGCTG	2 cut(s)	1471, 3125
RsaI	GTAC	4 cut(s)	278, 1574, 2923, 3152
RsaNI	GTAC	4 cut(s)	277, 1573, 2922, 3151
RseI	CAYNNNNRTG	1 cut(s)	3080
SacI	GAGCTC	2 cut(s)	252, 2851
SalI	GTCGAC	1 cut(s)	2939
SapI	GCTCTTC	1 cut(s)	2583
Sau96I	GGNCC	3 cut(s)	72, 820, 3576
SchI	GAGTC	5 cut(s)	686, 1832, 2833, 3186, 3340
SduI	GDGCHC	4 cut(s)	82, 252, 2542, 2851
SfcI	CTRYAG	3 cut(s)	1472, 2835, 3243
Sfr274I	CTCGAG	2 cut(s)	681, 1022
SfuI	TTCGAA	2 cut(s)	267, 697
SinI	GGWCC	2 cut(s)	72, 3576
SlaI	CTCGAG	2 cut(s)	681, 1022
SmaI	CCCGGG	1 cut(s)	3485
SmiMI	CAYNNNNRTG	1 cut(s)	3080
SmlI	CTYRAG	6 cut(s)	170, 681, 1022, 1808, 2035, 2258
SmoI	CTYRAG	6 cut(s)	170, 681, 1022, 1808, 2035, 2258
SpeI	ACTAGT	1 cut(s)	1396
SphI	GCATGC	1 cut(s)	608
SseBI	AGGCCT	2 cut(s)	440, 2833
SstI	GAGCTC	2 cut(s)	252, 2851
StuI	AGGCCT	2 cut(s)	440, 2833
StyI	CCWWGG	5 cut(s)	441, 816, 1173, 2444, 2959
TaaI	ACNGT	4 cut(s)	18, 2750, 2906, 2921
TaqII	GACCGA	1 cut(s)	3181
TatI	WGTACW	2 cut(s)	276, 1572
TauI	GCSGC	4 cut(s)	13, 1775, 3015, 3018
TscAI	CASTG	6 cut(s)	220, 2620, 2755, 2911, 3264, 3387
TseFI	GTSAC	1 cut(s)	3206
Tsp45I	GTSAC	1 cut(s)	3206
TspGWI	ACGGA	4 cut(s)	1930, 2926, 3019, 3266
TspMI	CCCGGG	1 cut(s)	3483
TspRI	CASTG	6 cut(s)	220, 2620, 2755, 2911, 3264, 3387
Tth111I	GACNNNGTC	2 cut(s)	3077, 3212
Van91I	CCANNNNNTGG	1 cut(s)	2459
Vha464I	CTTAAG	1 cut(s)	1808
VpaK11BI	GGWCC	2 cut(s)	72, 3576
XapI	RAATTY	4 cut(s)	828, 1139, 1904, 2548
XbaI	TCTAGA	1 cut(s)	472
XceI	RCATGY	3 cut(s)	608, 1739, 2947
XhoI	CTCGAG	2 cut(s)	681, 1022
XmaI	CCCGGG	1 cut(s)	3483
XmiI	GTMKAC	1 cut(s)	2940
XmnI	GAANNNNTTC	4 cut(s)	643, 2709, 3114, 3132
Zsp2I	ATGCAT	1 cut(s)	606

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.