Nuclear matrix constituent protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67230 |
| fragaria_vesca | FvH4_6g45461 FvH4_6g45461 FvH4_6g45461 FvH4_6g45461 FvH4_6g45461 |
| malus_domestica | MD09G1082900.v1.1 |
| prunus_persica | Prupe.3G240800_v2.0.a1 |
| pyrus_communis | pycom09g00940 |
| rosa_chinensis | RchiOBHm_Chr2g0163401 |
| rosa_laevigata | RLG00000021390 |
| rosa_roxburghii | Rroxscaffold_2G00087370 |
| rosa_rugosa | Rorug02G0502200 Rorug02G0502300 |
| rosa_samantha | Rh2AG569300 Rh2BG581400 Rh2CG551200 Rh2DG591300 |
| rosa_wichuraiana | Rw2G047110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 288 |
| AccIII | TCCGGA | 1 cut(s) | 3051 |
| AclWI | GGATC | 4 cut(s) | 651, 849, 1030, 3051 |
| AcoI | YGGCCR | 2 cut(s) | 699, 2980 |
| AcsI | RAATTY | 6 cut(s) | 73, 376, 611, 1853, 2161, 3280 |
| AcuI | CTGAAG | 5 cut(s) | 1482, 1578, 1661, 2253, 2301 |
| AdeI | CACNNNGTG | 1 cut(s) | 3226 |
| AfaI | GTAC | 5 cut(s) | 221, 227, 556, 1523, 3044 |
| AjnI | CCWGG | 6 cut(s) | 273, 1767, 2349, 2404, 2458, 3427 |
| Alw21I | GWGCWC | 6 cut(s) | 269, 643, 2435, 2485, 2725, 2908 |
| Alw26I | GTCTC | 5 cut(s) | 36, 434, 683, 2388, 3097 |
| Alw44I | GTGCAC | 2 cut(s) | 639, 2431 |
| AlwI | GGATC | 4 cut(s) | 651, 849, 1030, 3051 |
| Ama87I | CYCGRG | 1 cut(s) | 1020 |
| Aor13HI | TCCGGA | 1 cut(s) | 3051 |
| AoxI | GGCC | 8 cut(s) | 699, 1278, 1764, 1782, 2701, 2705, 2980, 3435 |
| ApaLI | GTGCAC | 2 cut(s) | 639, 2431 |
| ApoI | RAATTY | 6 cut(s) | 73, 376, 611, 1853, 2161, 3280 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 37 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1542, 1821, 1845 |
| AspLEI | GCGC | 1 cut(s) | 289 |
| AspS9I | GGNCC | 7 cut(s) | 57, 1765, 1783, 2293, 2706, 2808, 3459 |
| AsuC2I | CCSGG | 3 cut(s) | 61, 170, 184 |
| AsuHPI | GGTGA | 5 cut(s) | 103, 176, 2240, 3212, 3443 |
| AsuII | TTCGAA | 2 cut(s) | 482, 646 |
| AsuNHI | GCTAGC | 3 cut(s) | 571, 760, 919 |
| AvaI | CYCGRG | 1 cut(s) | 1020 |
| AvaII | GGWCC | 4 cut(s) | 57, 2293, 2808, 3459 |
| BaeGI | GKGCMC | 2 cut(s) | 643, 2435 |
| BalI | TGGCCA | 1 cut(s) | 701 |
| BanII | GRGCYC | 2 cut(s) | 132, 269 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1404, 1436 |
| Bbv12I | GWGCWC | 6 cut(s) | 269, 643, 2435, 2485, 2725, 2908 |
| BbvCI | CCTCAGC | 2 cut(s) | 576, 2814 |
| BccI | CCATC | 5 cut(s) | 167, 345, 3251, 3263, 3344 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 425, 459, 482, 516, 2462, 2496, 3075, 3109 |
| BciT130I | CCWGG | 6 cut(s) | 275, 1769, 2351, 2406, 2460, 3429 |
| BclI | TGATCA | 1 cut(s) | 1105 |
| BcnI | CCSGG | 3 cut(s) | 61, 170, 184 |
| BcoDI | GTCTC | 5 cut(s) | 36, 434, 683, 2388, 3097 |
| BglII | AGATCT | 1 cut(s) | 1753 |
| BlpI | GCTNAGC | 2 cut(s) | 1679, 3018 |
| Bme1390I | CCNGG | 9 cut(s) | 61, 170, 184, 275, 1769, 2351, 2406, 2460, 3429 |
| Bme18I | GGWCC | 4 cut(s) | 57, 2293, 2808, 3459 |
| BmeT110I | CYCGRG | 1 cut(s) | 1020 |
| BmgT120I | GGNCC | 7 cut(s) | 57, 1765, 1783, 2293, 2706, 2808, 3459 |
| BmiI | GGNNCC | 3 cut(s) | 58, 2809, 3319 |
| BmrFI | CCNGG | 9 cut(s) | 61, 170, 184, 275, 1769, 2351, 2406, 2460, 3429 |
| BmrI | ACTGGG | 1 cut(s) | 63 |
| BmsI | GCATC | 9 cut(s) | 301, 341, 553, 859, 1006, 2086, 2740, 2806, 3376 |
| BmtI | GCTAGC | 3 cut(s) | 575, 764, 923 |
| BmuI | ACTGGG | 1 cut(s) | 63 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 251, 283 |
| BpmI | CTGGAG | 5 cut(s) | 215, 554, 651, 1922, 2388 |
| Bpu10I | CCTNAGC | 3 cut(s) | 576, 2754, 2814 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1679, 3018 |
| Bpu14I | TTCGAA | 2 cut(s) | 482, 646 |
| BpuEI | CTTGAG | 6 cut(s) | 253, 2005, 2192, 2531, 2901, 3237 |
| BpuMI | CCSGG | 3 cut(s) | 61, 170, 184 |
| Bsa29I | ATCGAT | 1 cut(s) | 1447 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3390 |
| BsaI | GGTCTC | 1 cut(s) | 36 |
| BsaJI | CCNNGG | 6 cut(s) | 492, 1761, 1767, 2459, 2690, 3376 |
| BsaWI | WCCGGW | 2 cut(s) | 47, 3051 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 974, 1004 |
| Bse118I | RCCGGY | 2 cut(s) | 2703, 2978 |
| Bse1I | ACTGG | 5 cut(s) | 58, 223, 513, 537, 999 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3390 |
| BseAI | TCCGGA | 1 cut(s) | 3051 |
| BseBI | CCWGG | 6 cut(s) | 275, 1769, 2351, 2406, 2460, 3429 |
| BseCI | ATCGAT | 1 cut(s) | 1447 |
| BseDI | CCNNGG | 6 cut(s) | 492, 1761, 1767, 2459, 2690, 3376 |
| BseGI | GGATG | 6 cut(s) | 178, 332, 1132, 1615, 3391, 3415 |
| BseJI | GATNNNNATC | 1 cut(s) | 3390 |
| BseNI | ACTGG | 5 cut(s) | 58, 223, 513, 537, 999 |
| BseRI | GAGGAG | 9 cut(s) | 386, 809, 1205, 1328, 1451, 1919, 2710, 3000, 3371 |
| BseSI | GKGCMC | 2 cut(s) | 643, 2435 |
| BsgI | GTGCAG | 1 cut(s) | 3285 |
| BshFI | GGCC | 8 cut(s) | 701, 1280, 1766, 1784, 2703, 2707, 2982, 3437 |
| BshVI | ATCGAT | 1 cut(s) | 1447 |
| BsiHKAI | GWGCWC | 6 cut(s) | 269, 643, 2435, 2485, 2725, 2908 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1020 |
| BslFI | GGGAC | 2 cut(s) | 2821, 3250 |
| BsmAI | GTCTC | 5 cut(s) | 36, 434, 683, 2388, 3097 |
| BsmFI | GGGAC | 2 cut(s) | 2821, 3250 |
| BsmI | GAATGC | 1 cut(s) | 1942 |
| BsnI | GGCC | 8 cut(s) | 701, 1280, 1766, 1784, 2703, 2707, 2982, 3437 |
| Bso31I | GGTCTC | 1 cut(s) | 36 |
| BsoBI | CYCGRG | 1 cut(s) | 1020 |
| Bsp119I | TTCGAA | 2 cut(s) | 482, 646 |
| Bsp1286I | GDGCHC | 7 cut(s) | 132, 269, 643, 2435, 2485, 2725, 2908 |
| Bsp13I | TCCGGA | 1 cut(s) | 3051 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1679, 3018 |
| BspANI | GGCC | 8 cut(s) | 701, 1280, 1766, 1784, 2703, 2707, 2982, 3437 |
| BspDI | ATCGAT | 1 cut(s) | 1447 |
| BspEI | TCCGGA | 1 cut(s) | 3051 |
| BspHI | TCATGA | 2 cut(s) | 1849, 2973 |
| BspLI | GGNNCC | 3 cut(s) | 58, 2809, 3319 |
| BspOI | GCTAGC | 3 cut(s) | 575, 764, 923 |
| BspPI | GGATC | 4 cut(s) | 651, 849, 1030, 3051 |
| BspQI | GCTCTTC | 1 cut(s) | 1596 |
| BspT104I | TTCGAA | 2 cut(s) | 482, 646 |
| BspTNI | GGTCTC | 1 cut(s) | 36 |
| BsrFI | RCCGGY | 2 cut(s) | 2703, 2978 |
| BsrI | ACTGG | 5 cut(s) | 58, 223, 513, 537, 999 |
| BssAI | RCCGGY | 2 cut(s) | 2703, 2978 |
| BssECI | CCNNGG | 6 cut(s) | 492, 1761, 1767, 2459, 2690, 3376 |
| BssT1I | CCWWGG | 1 cut(s) | 1761 |
| Bst2UI | CCWGG | 6 cut(s) | 275, 1769, 2351, 2406, 2460, 3429 |
| Bst4CI | ACNGT | 6 cut(s) | 1344, 1479, 2184, 2225, 2961, 3042 |
| Bst6I | CTCTTC | 6 cut(s) | 747, 1461, 1596, 1637, 1996, 3114 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 311 |
| BstBI | TTCGAA | 2 cut(s) | 482, 646 |
| BstDSI | CCRYGG | 2 cut(s) | 2690, 3376 |
| BstEII | GGTNACC | 1 cut(s) | 164 |
| BstF5I | GGATG | 6 cut(s) | 178, 332, 1132, 1615, 3391, 3415 |
| BstHHI | GCGC | 1 cut(s) | 289 |
| BstMAI | GTCTC | 5 cut(s) | 36, 434, 683, 2388, 3097 |
| BstNI | CCWGG | 6 cut(s) | 275, 1769, 2351, 2406, 2460, 3429 |
| BstNSI | RCATGY | 3 cut(s) | 1076, 1528, 2546 |
| BstPI | GGTNACC | 1 cut(s) | 164 |
| BstSCI | CCNGG | 9 cut(s) | 59, 168, 182, 273, 1767, 2349, 2404, 2458, 3427 |
| BstSLI | GKGCMC | 2 cut(s) | 643, 2435 |
| BstX2I | RGATCY | 5 cut(s) | 656, 841, 1035, 1753, 3056 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2644 |
| BstYI | RGATCY | 5 cut(s) | 656, 841, 1035, 1753, 3056 |
| Bsu15I | ATCGAT | 1 cut(s) | 1447 |
| BsuRI | GGCC | 8 cut(s) | 701, 1280, 1766, 1784, 2703, 2707, 2982, 3437 |
| BsuTUI | ATCGAT | 1 cut(s) | 1447 |
| BtgI | CCRYGG | 2 cut(s) | 2690, 3376 |
| BtsCI | GGATG | 6 cut(s) | 178, 332, 1132, 1615, 3391, 3415 |
| BtsI | GCAGTG | 2 cut(s) | 413, 3306 |
| BtsIMutI | CAGTG | 7 cut(s) | 413, 530, 884, 1438, 1484, 3285, 3306 |
| CciI | TCATGA | 2 cut(s) | 1849, 2973 |
| CfoI | GCGC | 1 cut(s) | 289 |
| Cfr10I | RCCGGY | 2 cut(s) | 2703, 2978 |
| Cfr13I | GGNCC | 7 cut(s) | 57, 1765, 1783, 2293, 2706, 2808, 3459 |
| ClaI | ATCGAT | 1 cut(s) | 1447 |
| Csp6I | GTAC | 5 cut(s) | 220, 226, 555, 1522, 3043 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3049, 3084 |
| CviQI | GTAC | 5 cut(s) | 220, 226, 555, 1522, 3043 |
| DraI | TTTAAA | 1 cut(s) | 936 |
| DraIII | CACNNNGTG | 1 cut(s) | 3226 |
| EaeI | YGGCCR | 2 cut(s) | 699, 2980 |
| Eam1104I | CTCTTC | 6 cut(s) | 747, 1461, 1596, 1637, 1996, 3114 |
| EarI | CTCTTC | 6 cut(s) | 747, 1461, 1596, 1637, 1996, 3114 |
| Ecl136II | GAGCTC | 1 cut(s) | 267 |
| Eco130I | CCWWGG | 1 cut(s) | 1761 |
| Eco147I | AGGCCT | 2 cut(s) | 1280, 3437 |
| Eco24I | GRGCYC | 2 cut(s) | 132, 269 |
| Eco31I | GGTCTC | 1 cut(s) | 36 |
| Eco47I | GGWCC | 4 cut(s) | 57, 2293, 2808, 3459 |
| Eco53kI | GAGCTC | 1 cut(s) | 267 |
| Eco57I | CTGAAG | 5 cut(s) | 1482, 1578, 1661, 2253, 2301 |
| Eco88I | CYCGRG | 1 cut(s) | 1020 |
| Eco91I | GGTNACC | 1 cut(s) | 164 |
| EcoICRI | GAGCTC | 1 cut(s) | 267 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2293 |
| EcoO65I | GGTNACC | 1 cut(s) | 164 |
| EcoRI | GAATTC | 1 cut(s) | 73 |
| EcoRII | CCWGG | 6 cut(s) | 273, 1767, 2349, 2404, 2458, 3427 |
| EcoT14I | CCWWGG | 1 cut(s) | 1761 |
| EcoT22I | ATGCAT | 1 cut(s) | 2835 |
| EcoT38I | GRGCYC | 2 cut(s) | 132, 269 |
| ErhI | CCWWGG | 1 cut(s) | 1761 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 676, 708, 916, 948, 1527, 1559, 2572, 2604 |
| FaqI | GGGAC | 2 cut(s) | 2821, 3250 |
| FauI | CCCGC | 2 cut(s) | 2716, 3227 |
| FauNDI | CATATG | 3 cut(s) | 1185, 1788, 2194 |
| FbaI | TGATCA | 1 cut(s) | 1105 |
| FokI | GGATG | 6 cut(s) | 185, 319, 1139, 1622, 3398, 3422 |
| FriOI | GRGCYC | 2 cut(s) | 132, 269 |
| FseI | GGCCGGCC | 1 cut(s) | 2707 |
| FspI | TGCGCA | 1 cut(s) | 288 |
| GlaI | GCGC | 1 cut(s) | 288 |
| GsuI | CTGGAG | 5 cut(s) | 215, 554, 651, 1922, 2388 |
| HaeIII | GGCC | 8 cut(s) | 701, 1280, 1766, 1784, 2703, 2707, 2982, 3437 |
| HhaI | GCGC | 1 cut(s) | 289 |
| Hin6I | GCGC | 1 cut(s) | 287 |
| HinP1I | GCGC | 1 cut(s) | 287 |
| HindIII | AAGCTT | 1 cut(s) | 188 |
| HphI | GGTGA | 5 cut(s) | 103, 176, 2240, 3212, 3443 |
| Hpy166II | GTNNAC | 5 cut(s) | 6, 94, 641, 2433, 2716 |
| Hpy8I | GTNNAC | 5 cut(s) | 6, 94, 641, 2433, 2716 |
| Hpy99I | CGWCG | 1 cut(s) | 148 |
| HpyCH4III | ACNGT | 6 cut(s) | 1344, 1479, 2184, 2225, 2961, 3042 |
| HspAI | GCGC | 1 cut(s) | 287 |
| Kpn2I | TCCGGA | 1 cut(s) | 3051 |
| KroI | GCCGGC | 1 cut(s) | 2703 |
| KroNI | GCCGGC | 1 cut(s) | 2705 |
| Ksp22I | TGATCA | 1 cut(s) | 1105 |
| LguI | GCTCTTC | 1 cut(s) | 1596 |
| LweI | GCATC | 9 cut(s) | 301, 341, 553, 859, 1006, 2086, 2740, 2806, 3376 |
| MaeIII | GTNAC | 7 cut(s) | 164, 990, 1198, 1456, 1473, 2228, 2659 |
| MflI | RGATCY | 5 cut(s) | 656, 841, 1035, 1753, 3056 |
| MhlI | GDGCHC | 7 cut(s) | 132, 269, 643, 2435, 2485, 2725, 2908 |
| MlsI | TGGCCA | 1 cut(s) | 701 |
| MluNI | TGGCCA | 1 cut(s) | 701 |
| MlyI | GAGTC | 4 cut(s) | 436, 2483, 3232, 3425 |
| MmeI | TCCRAC | 4 cut(s) | 1077, 1104, 1890, 2625 |
| Mox20I | TGGCCA | 1 cut(s) | 701 |
| Mph1103I | ATGCAT | 1 cut(s) | 2835 |
| MroI | TCCGGA | 1 cut(s) | 3051 |
| MroNI | GCCGGC | 1 cut(s) | 2703 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1542, 1821, 1845 |
| MscI | TGGCCA | 1 cut(s) | 701 |
| MseI | TTAA | 6 cut(s) | 615, 935, 1305, 1977, 3108, 3185 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2802 |
| Msp20I | TGGCCA | 1 cut(s) | 701 |
| MspA1I | CMGCKG | 6 cut(s) | 560, 1486, 1721, 2273, 2813, 2986 |
| MspR9I | CCNGG | 9 cut(s) | 61, 170, 184, 275, 1769, 2351, 2406, 2460, 3429 |
| Mva1269I | GAATGC | 1 cut(s) | 1942 |
| MvaI | CCWGG | 6 cut(s) | 275, 1769, 2351, 2406, 2460, 3429 |
| NaeI | GCCGGC | 1 cut(s) | 2705 |
| NciI | CCSGG | 3 cut(s) | 61, 170, 184 |
| NdeI | CATATG | 3 cut(s) | 1185, 1788, 2194 |
| NgoMIV | GCCGGC | 1 cut(s) | 2703 |
| NheI | GCTAGC | 3 cut(s) | 571, 760, 919 |
| NlaIV | GGNNCC | 3 cut(s) | 58, 2809, 3319 |
| NmeAIII | GCCGAG | 2 cut(s) | 66, 517 |
| NmuCI | GTSAC | 4 cut(s) | 164, 1198, 1473, 2228 |
| NsbI | TGCGCA | 1 cut(s) | 288 |
| NsiI | ATGCAT | 1 cut(s) | 2835 |
| NspI | RCATGY | 3 cut(s) | 1076, 1528, 2546 |
| NspV | TTCGAA | 2 cut(s) | 482, 646 |
| PaeI | GCATGC | 1 cut(s) | 1076 |
| PaeR7I | CTCGAG | 1 cut(s) | 1020 |
| PagI | TCATGA | 2 cut(s) | 1849, 2973 |
| PceI | AGGCCT | 2 cut(s) | 1280, 3437 |
| PciSI | GCTCTTC | 1 cut(s) | 1596 |
| PctI | GAATGC | 1 cut(s) | 1942 |
| PdiI | GCCGGC | 1 cut(s) | 2705 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1542, 1821, 1845 |
| PflFI | GACNNNGTC | 1 cut(s) | 2473 |
| PfoI | TCCNGGA | 1 cut(s) | 59 |
| PleI | GAGTC | 4 cut(s) | 436, 2482, 3232, 3424 |
| PpsI | GAGTC | 4 cut(s) | 436, 2482, 3232, 3424 |
| PpuMI | RGGWCCY | 1 cut(s) | 2293 |
| Psp124BI | GAGCTC | 1 cut(s) | 269 |
| Psp5II | RGGWCCY | 1 cut(s) | 2293 |
| Psp6I | CCWGG | 6 cut(s) | 273, 1767, 2349, 2404, 2458, 3427 |
| PspEI | GGTNACC | 1 cut(s) | 164 |
| PspGI | CCWGG | 6 cut(s) | 273, 1767, 2349, 2404, 2458, 3427 |
| PspN4I | GGNNCC | 3 cut(s) | 58, 2809, 3319 |
| PspPI | GGNCC | 7 cut(s) | 57, 1765, 1783, 2293, 2706, 2808, 3459 |
| PspPPI | RGGWCCY | 1 cut(s) | 2293 |
| PsuI | RGATCY | 5 cut(s) | 656, 841, 1035, 1753, 3056 |
| PsyI | GACNNNGTC | 1 cut(s) | 2473 |
| PvuII | CAGCTG | 2 cut(s) | 560, 2273 |
| RigI | GGCCGGCC | 1 cut(s) | 2707 |
| RsaI | GTAC | 5 cut(s) | 221, 227, 556, 1523, 3044 |
| RsaNI | GTAC | 5 cut(s) | 220, 226, 555, 1522, 3043 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2802 |
| SacI | GAGCTC | 1 cut(s) | 269 |
| SapI | GCTCTTC | 1 cut(s) | 1596 |
| SaqAI | TTAA | 6 cut(s) | 615, 935, 1305, 1977, 3108, 3185 |
| Sau96I | GGNCC | 7 cut(s) | 57, 1765, 1783, 2293, 2706, 2808, 3459 |
| SchI | GAGTC | 4 cut(s) | 436, 2483, 3232, 3425 |
| ScrFI | CCNGG | 9 cut(s) | 61, 170, 184, 275, 1769, 2351, 2406, 2460, 3429 |
| SduI | GDGCHC | 7 cut(s) | 132, 269, 643, 2435, 2485, 2725, 2908 |
| SfaNI | GCATC | 9 cut(s) | 301, 341, 553, 859, 1006, 2086, 2740, 2806, 3376 |
| Sfr274I | CTCGAG | 1 cut(s) | 1020 |
| SfuI | TTCGAA | 2 cut(s) | 482, 646 |
| SinI | GGWCC | 4 cut(s) | 57, 2293, 2808, 3459 |
| SlaI | CTCGAG | 1 cut(s) | 1020 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2802 |
| SmlI | CTYRAG | 7 cut(s) | 268, 1020, 1984, 2207, 2510, 2916, 3252 |
| SmoI | CTYRAG | 7 cut(s) | 268, 1020, 1984, 2207, 2510, 2916, 3252 |
| SphI | GCATGC | 1 cut(s) | 1076 |
| SseBI | AGGCCT | 2 cut(s) | 1280, 3437 |
| SstI | GAGCTC | 1 cut(s) | 269 |
| StuI | AGGCCT | 2 cut(s) | 1280, 3437 |
| StyD4I | CCNGG | 9 cut(s) | 59, 168, 182, 273, 1767, 2349, 2404, 2458, 3427 |
| StyI | CCWWGG | 1 cut(s) | 1761 |
| TaaI | ACNGT | 6 cut(s) | 1344, 1479, 2184, 2225, 2961, 3042 |
| TaqI | TCGA | 4 cut(s) | 482, 646, 1021, 1447 |
| TaqII | GACCGA | 1 cut(s) | 2486 |
| TatI | WGTACW | 2 cut(s) | 225, 1521 |
| TauI | GCSGC | 4 cut(s) | 1724, 1784, 1900, 2360 |
| Tru1I | TTAA | 6 cut(s) | 615, 935, 1305, 1977, 3108, 3185 |
| Tru9I | TTAA | 6 cut(s) | 615, 935, 1305, 1977, 3108, 3185 |
| TscAI | CASTG | 7 cut(s) | 413, 537, 891, 1438, 1484, 3292, 3306 |
| TseFI | GTSAC | 4 cut(s) | 164, 1198, 1473, 2228 |
| Tsp45I | GTSAC | 4 cut(s) | 164, 1198, 1473, 2228 |
| TspGWI | ACGGA | 4 cut(s) | 1438, 2707, 2905, 3158 |
| TspRI | CASTG | 7 cut(s) | 413, 537, 891, 1438, 1484, 3292, 3306 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2473 |
| VneI | GTGCAC | 2 cut(s) | 639, 2431 |
| VpaK11BI | GGWCC | 4 cut(s) | 57, 2293, 2808, 3459 |
| XapI | RAATTY | 6 cut(s) | 73, 376, 611, 1853, 2161, 3280 |
| XbaI | TCTAGA | 1 cut(s) | 421 |
| XceI | RCATGY | 3 cut(s) | 1076, 1528, 2546 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3292 |
| XhoI | CTCGAG | 1 cut(s) | 1020 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1542, 1821, 1845 |
| Zsp2I | ATGCAT | 1 cut(s) | 2835 |