Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0012184

Physical Location & Seq

Genomic Coordinates Forward (+)

79995588 .. 80002450

Gene Structure 6863 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG569300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3306 bp

ATGGGGTTGCTCCTGATTGAGAAAAAGGAGTGGACGTCTAGGCAAGAAGAACTCGGGCAGTCATTGGCAGAAGCAAAAGATGCTCTCAAAAGAGAACAAGCAGCCCATTTGATTGCAACTGCTGAAATTGAAAAGCGAGAGGAGAATTTGAGGAAGGCCTTGGGAGTTGAGAAGCAGTGTGTGCTTGATCTAGAGAAGGCTTTGCGTGAGATCCGTTCAGAGATTGCAGAAATTAAGTTTACTGCTGATTCGAAGTTGGCAGAGGCAAATGCTTTGGTTGCTAGCATAGAAGAAAAATCACTGGAGTTAGAGGCAAAGTTGCGTACTGCTGATGCGAAGCTAGCTGAAGTCAACAGGAAAAGTTCGGAGATAGAGAGCAAAACAATGGACTTGGAGGCTCGAGAAAGTGCCCTTCGAAGAGATAGATCCTCCTTCAATTCAGAACAGGAAGTACGGGAGAATTCTTTGGCCAAGTGGAGGGAGGACTTACTAGAATGGGAAAGGAAATTGCAAGAGGGAGAAGAGAGGCTAGCCAGAGGTCAAAGAAATATCAACCAAAGAGAGGAGAGGGCAAATGAGCACGATAGGTCTTTGAAGAATAAAGAGAAGGATCTAGAAGATGCAGAGAAGAAAATCGATGCAACTAACGAAACACTGAAAAGAAAAGAAGATGATGTTACGAGCAGGCTAGCAAGTCTAACTTTAAAAGAAAAGGAATATGATGATATGAGAATGAACTTAGAAGTGAAGGAGAAGGAGTTACTAGCTCTGGAAGAAAAGCTCAATGCTAGAGAAAGAATTGAGATCCAAAAGGCTACTGATGAACACAATGCCATTCTGCATGCAAAACAATGTGATTTTGAGTTGGAAATTGATCAAAAGAGAAAATCGTTGGATGATGAATTGAGAAACAGGTTGGTTGATGTGGAGAAGAAGGAATCTGAAGTCAATCATATGGAGGAGAAAGTCACTAAACGGGAGCAAGCATTGGAAAAGAGAGGGGAAAAGCTCAGGGAGAAAGAGAAGGACTATGAATCTAAAATGAAGGCCTTGAAGGAAAAAGAGAAATCTATTAAATCGGAGGAGAAGAACTTTGAAGCGGAGAAGAAACAGTTACTTGCTGATAAAGAGGATATGGCTAGGCTTTTGGCTGAAATGGAGCAGATAAAGGCTGATAATGAAGATAAGCTACGGAAGATCAGTGAGGAGAGTGATCGAATGAAAGTAAGTGAAGAAGAGAGGTCACAGTGTCAGCGGTTGCAGTCAGAATTGAAACAGGAAATTGACAAGTACATGCAACAGAAAGAACTGCTTTTAAGGGAAGCTGAAGATTTGAAGCAGCAAAAGGAGCTTTTTGAGAAAGAGTGGGAAGAGTTGGATGACAAAAGAGCTCAGATTGAGAAAGAGCTGAAGAGTGTGAGAGAACAGAAAGAAGAAGTCGAAAAGCTCAATCGAATTGAAGTAGAGAGGTTGAAAAATGAAAGAGTGGCGGCACAGGATTGTATACAAAGAGAGCGAGAAGATCTTGCCTTGGCCCAGGAATCATTTGCCGCCCATATGGAGCATGAGAAGGCAGTATTAGCTGAAAAAGTTCAAAGCGAGAAAAGTGAAATGGTTCATGAATTTGAAGCTCTGAAAAGAGAACTTGAAACTGATATGCAGAAGCGGCTAGAGGAGTTGGAGAAACCCTTACGGGAAAGGGAGAACTCTTTTGCAGAAGAAAGAGAGAGAGAATTAGACAATGTTAATTACTTAAGAGATGTTGCTAGAAGAGAAATGGAGGACATCAAGGCTGAAAGAATTAAAATTGGAAAAGAGAGACAAGAAGCTGATGAAAATAAGGAGCATCTTGAAAGGCAGCGAGTTGAAATTAGGAAAGACATTGATGGACTTCTCGATCTTAGCCGGAAACTGAGAGATCAGCGAGAACAATTTATCAAGGAAAGAGAACACTTTATTTCATATGTTGAGAAGCTCAAAGGTTGCAAGAACTGTGGTGACATAATCTCTGAGTTTGTGCTTTCTAATCTACAACCTTTAGCTGAAACTGAAGACACGGAGGTCCTTCCCTTGCCAAGACTGAGTGATGATTATGTGAAGGTAAGTTACAATGAAAGCCTGGCTGCTGCTGAGAGGAACAATAATGAGAAGTCTTCTGGTGCTGATTCAAAATCTCCAGTTTCTGGTGGAATGTCTTGGCTTCGCAAGTGCACCTCAAAGATTCTTATTTTCTCTCCAGGGAAAAAGACTGAGTCTGGTGCTCTACACAATTTGGCAAAGGAAACCCCATTTTCACATGAGCCAGATAGAGAACCATCCAATAGGTTACATACTGAAAATGAGGCGGAGGTTTCTTTTGGAGTGGCAAGTGGTTCTTTAGATGTGCAGAGAATCCAATCTGACAACAGCATCAGAGAGGTTGATGCTGGCCAATATCCTTCAGCTGATGAACACATCAGTGAAGCACCCAATGTGTTAAAAGATTCACAGCCAACTAATTTGAAGGGTGGTCGTCAGAAGCCACGTGGGAGAGGCAGGGCCACAGTTAACAGAACACGCTCTGTGAAAGCAGTTGTCAAAGATGCCAAGGCTATACTTGGAGAGGCTTTTGAAACAAATGACGGTCAGTATCAGAATGGGACTGCTGAGGATTCTGCCAATATGTATACTGAAAGCCATGACGATTCTAGTCTTGCTGGTAAAAGAACAAGAAGAAATGGACGGAAGCGTGGCCGTGCTCAGACATCTCAAGTTGCTGTGAGTGAGCATGGTGGGGATGATAGTGAACGGTCTGACAGTGTCATGACCGGCCAGCGCAAGAAGAGGCGAGAAAAAGTTCTTGCAGCTGAGCAACCTCCAAATGAAAGACGGTACAATCTCCGGAGATCCAAAGCTGGTGGTAAAGTTGCTGCTGCAAAAGTCTCACACGACCTTGTCAAACAAAATGAAGAGGTTGATAGTGCCAGAGATACGGAGGCGGAGATTCTCTACTCCAAAGCTGCTCCTGCTACTTCAACAGGATTTGCTGGCGAGAATGGTGGAAGCACACACTTTGTGCGGTGTGGGACTCTTGCAGACACTCAAGATGGTGGTGCAGATGGAGTAGAAAATTCGGCTGAGAATATGGCAGTGAGTGAAGCAAATGGTTCCACAGAAGGGGGTCAGGAGTATGTTGATGGAGAGCAGTACAGGAGTGAATCACGTGGGGAGGATGCAAATCTCATTGAAGATGATGATGATGATGAGTCTGAACATCCTGGTGAGGCCTCGATAGGGAAGAAGGTTTGGACCTTCCTCACAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000229 GO:0000785 GO:0000789 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005652 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0006996 GO:0006997 GO:0008150 GO:0009987 GO:0012505 GO:0016043 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032535 GO:0034399 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0065007 GO:0065008 GO:0070013 GO:0071840 GO:0090066 GO:0097298

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1101

Amino Acids

126.26

Weight (kDa)

5.2

Isoelectric Point (pI)

48.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012184)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67230
fragaria_vesca	FvH4_6g45461 FvH4_6g45461 FvH4_6g45461 FvH4_6g45461 FvH4_6g45461
malus_domestica	MD09G1082900.v1.1
prunus_persica	Prupe.3G240800_v2.0.a1
pyrus_communis	pycom09g00940
rosa_chinensis	RchiOBHm_Chr2g0163401
rosa_laevigata	RLG00000021390
rosa_roxburghii	Rroxscaffold_2G00087370
rosa_rugosa	Rorug02G0502200 Rorug02G0502300
rosa_samantha	Rh2AG569300 Rh2BG581400 Rh2CG551200 Rh2DG591300
rosa_wichuraiana	Rw2G047110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2060
AatII	GACGTC	1 cut(s)	38
AccB7I	CCANNNNNTGG	1 cut(s)	2183
AccI	GTMKAC	2 cut(s)	1504, 2666
AccIII	TCCGGA	1 cut(s)	2880
AciI	CCGC	8 cut(s)	1100, 1255, 1490, 1551, 1666, 2345, 2978, 3058
AclWI	GGATC	5 cut(s)	205, 420, 618, 799, 2880
AcoI	YGGCCR	4 cut(s)	468, 2428, 2731, 2809
AcsI	RAATTY	4 cut(s)	145, 460, 1622, 3109
AcuI	CTGAAG	6 cut(s)	366, 963, 1347, 1430, 2070, 2424
AcvI	CACGTG	2 cut(s)	2525, 3203
AcyI	GRCGYC	1 cut(s)	35
AdeI	CACNNNGTG	1 cut(s)	3055
AfaI	GTAC	5 cut(s)	325, 453, 1292, 2873, 3188
AfiI	CCNNNNNNNGG	5 cut(s)	477, 562, 2183, 3156, 3273
AflII	CTTAAG	1 cut(s)	1753
AjnI	CCWGG	4 cut(s)	1536, 2118, 2236, 3256
AleI	CACNNNNGTG	1 cut(s)	2457
Alw21I	GWGCWC	5 cut(s)	582, 1393, 2213, 2263, 2740
Alw26I	GTCTC	2 cut(s)	1813, 2926
Alw44I	GTGCAC	1 cut(s)	2209
AlwI	GGATC	5 cut(s)	205, 420, 618, 799, 2880
AlwNI	CAGNNNCTG	1 cut(s)	2183
Ama87I	CYCGRG	2 cut(s)	53, 399
Aor13HI	TCCGGA	1 cut(s)	2880
AoxI	GGCC	9 cut(s)	156, 468, 1047, 1533, 2428, 2538, 2731, 2809, 3264
ApaLI	GTGCAC	1 cut(s)	2209
ApeKI	GCWGC	9 cut(s)	101, 1339, 1858, 2123, 2126, 2843, 2909, 2912, 2999
ApoI	RAATTY	4 cut(s)	145, 460, 1622, 3109
Asp700I	GAANNNNTTC	3 cut(s)	1590, 1614, 2835
AspLEI	GCGC	1 cut(s)	2817
AspS9I	GGNCC	4 cut(s)	1534, 2062, 2538, 3288
AsuHPI	GGTGA	2 cut(s)	2009, 3272
AsuII	TTCGAA	2 cut(s)	251, 415
AsuNHI	GCTAGC	4 cut(s)	281, 340, 529, 688
AvaI	CYCGRG	2 cut(s)	53, 399
AvaII	GGWCC	2 cut(s)	2062, 3288
BaeGI	GKGCMC	2 cut(s)	412, 2213
BalI	TGGCCA	2 cut(s)	470, 2430
BanII	GRGCYC	1 cut(s)	1393
BarI	GAAGNNNNNNTAC	4 cut(s)	1173, 1205, 2090, 2122
BbrPI	CACGTG	2 cut(s)	2525, 3203
BbsI	GAAGAC	2 cut(s)	2058, 2145
Bbv12I	GWGCWC	5 cut(s)	582, 1393, 2213, 2263, 2740
BbvCI	CCTCAGC	1 cut(s)	2646
BbvI	GCAGC	9 cut(s)	113, 1351, 1870, 2110, 2113, 2855, 2896, 2899, 2986
BccI	CCATC	5 cut(s)	1880, 2323, 3080, 3092, 3170
BceAI	ACGGC	1 cut(s)	2718
BciT130I	CCWGG	4 cut(s)	1538, 2120, 2238, 3258
BclI	TGATCA	1 cut(s)	874
BcoDI	GTCTC	2 cut(s)	1813, 2926
BfrI	CTTAAG	1 cut(s)	1753
BglII	AGATCT	1 cut(s)	1522
BlpI	GCTNAGC	1 cut(s)	2847
Bme1390I	CCNGG	4 cut(s)	1538, 2120, 2238, 3258
Bme18I	GGWCC	2 cut(s)	2062, 3288
BmeT110I	CYCGRG	2 cut(s)	53, 399
BmgT120I	GGNCC	4 cut(s)	1534, 2062, 2538, 3288
BmiI	GGNNCC	1 cut(s)	3148
BmrFI	CCNGG	4 cut(s)	1538, 2120, 2238, 3258
BmsI	GCATC	9 cut(s)	70, 322, 610, 628, 1855, 2413, 2418, 2572, 3202
BmtI	GCTAGC	4 cut(s)	285, 344, 533, 692
BpiI	GAAGAC	2 cut(s)	2058, 2145
BpmI	CTGGAG	3 cut(s)	323, 2160, 2220
Bpu10I	CCTNAGC	2 cut(s)	1010, 2646
Bpu1102I	GCTNAGC	1 cut(s)	2847
Bpu14I	TTCGAA	2 cut(s)	251, 415
BpuEI	CTTGAG	2 cut(s)	2733, 3066
Bsa29I	ATCGAT	1 cut(s)	636
BsaAI	YACGTR	2 cut(s)	2525, 3203
BsaBI	GATNNNNATC	1 cut(s)	3216
BsaHI	GRCGYC	1 cut(s)	35
BsaJI	CCNNGG	5 cut(s)	159, 1530, 1536, 2237, 2586
BsaWI	WCCGGW	1 cut(s)	2880
BsaXI	ACNNNNNCTCC	4 cut(s)	20, 50, 743, 773
Bsc4I	CCNNNNNNNGG	5 cut(s)	477, 562, 2183, 3156, 3273
Bse118I	RCCGGY	1 cut(s)	2807
Bse1I	ACTGG	2 cut(s)	306, 2177
Bse8I	GATNNNNATC	1 cut(s)	3216
BseAI	TCCGGA	1 cut(s)	2880
BseBI	CCWGG	4 cut(s)	1538, 2120, 2238, 3258
BseCI	ATCGAT	1 cut(s)	636
BseDI	CCNNGG	5 cut(s)	159, 1530, 1536, 2237, 2586
BseGI	GGATG	6 cut(s)	901, 1384, 2315, 2782, 3217, 3253
BseJI	GATNNNNATC	1 cut(s)	3216
BseLI	CCNNNNNNNGG	5 cut(s)	477, 562, 2183, 3156, 3273
BseNI	ACTGG	2 cut(s)	306, 2177
BseRI	GAGGAG	6 cut(s)	155, 578, 974, 1097, 1220, 1688
BseSI	GKGCMC	2 cut(s)	412, 2213
BseXI	GCAGC	9 cut(s)	113, 1351, 1870, 2110, 2113, 2855, 2896, 2899, 2986
BsgI	GTGCAG	2 cut(s)	2405, 3114
BshFI	GGCC	9 cut(s)	158, 470, 1049, 1535, 2430, 2540, 2733, 2811, 3266
BshVI	ATCGAT	1 cut(s)	636
BsiHKAI	GWGCWC	5 cut(s)	582, 1393, 2213, 2263, 2740
BsiHKCI	CYCGRG	2 cut(s)	53, 399
BsiSI	CCGG	3 cut(s)	1906, 2808, 2881
BslFI	GGGAC	2 cut(s)	2653, 3079
BslI	CCNNNNNNNGG	5 cut(s)	477, 562, 2183, 3156, 3273
BsmAI	GTCTC	2 cut(s)	1813, 2926
BsmFI	GGGAC	2 cut(s)	2653, 3079
BsnI	GGCC	9 cut(s)	158, 470, 1049, 1535, 2430, 2540, 2733, 2811, 3266
BsoBI	CYCGRG	2 cut(s)	53, 399
Bsp119I	TTCGAA	2 cut(s)	251, 415
Bsp1286I	GDGCHC	6 cut(s)	412, 582, 1393, 2213, 2263, 2740
Bsp13I	TCCGGA	1 cut(s)	2880
Bsp1720I	GCTNAGC	1 cut(s)	2847
BspACI	CCGC	8 cut(s)	1100, 1255, 1490, 1551, 1666, 2345, 2978, 3058
BspANI	GGCC	9 cut(s)	158, 470, 1049, 1535, 2430, 2540, 2733, 2811, 3266
BspDI	ATCGAT	1 cut(s)	636
BspEI	TCCGGA	1 cut(s)	2880
BspHI	TCATGA	2 cut(s)	1618, 2802
BspLI	GGNNCC	1 cut(s)	3148
BspOI	GCTAGC	4 cut(s)	285, 344, 533, 692
BspPI	GGATC	5 cut(s)	205, 420, 618, 799, 2880
BspT104I	TTCGAA	2 cut(s)	251, 415
BspTI	CTTAAG	1 cut(s)	1753
BsrFI	RCCGGY	1 cut(s)	2807
BsrI	ACTGG	2 cut(s)	306, 2177
BssAI	RCCGGY	1 cut(s)	2807
BssECI	CCNNGG	5 cut(s)	159, 1530, 1536, 2237, 2586
BssNAI	GTATAC	2 cut(s)	1505, 2667
BssNI	GRCGYC	1 cut(s)	35
BssT1I	CCWWGG	3 cut(s)	159, 1530, 2586
Bst1107I	GTATAC	2 cut(s)	1505, 2667
Bst2UI	CCWGG	4 cut(s)	1538, 2120, 2238, 3258
Bst4CI	ACNGT	8 cut(s)	1113, 1248, 1994, 2545, 2624, 2790, 2798, 2871
Bst6I	CTCTTC	8 cut(s)	412, 516, 1230, 1365, 1406, 1765, 2816, 2943
BstACI	GRCGYC	1 cut(s)	35
BstAFI	CTTAAG	1 cut(s)	1753
BstAPI	GCANNNNNTGC	2 cut(s)	80, 181
BstBAI	YACGTR	2 cut(s)	2525, 3203
BstBI	TTCGAA	2 cut(s)	251, 415
BstF5I	GGATG	6 cut(s)	901, 1384, 2315, 2782, 3217, 3253
BstHHI	GCGC	1 cut(s)	2817
BstMAI	GTCTC	2 cut(s)	1813, 2926
BstMWI	GCNNNNNNNGC	8 cut(s)	80, 181, 278, 341, 1348, 1580, 1666, 3005
BstNI	CCWGG	4 cut(s)	1538, 2120, 2238, 3258
BstNSI	RCATGY	2 cut(s)	845, 1297
BstSCI	CCNGG	4 cut(s)	1536, 2118, 2236, 3256
BstSLI	GKGCMC	2 cut(s)	412, 2213
BstV1I	GCAGC	9 cut(s)	113, 1351, 1870, 2110, 2113, 2855, 2896, 2899, 2986
BstV2I	GAAGAC	2 cut(s)	2058, 2145
BstX2I	RGATCY	6 cut(s)	210, 425, 610, 804, 1522, 2885
BstYI	RGATCY	6 cut(s)	210, 425, 610, 804, 1522, 2885
BstZ17I	GTATAC	2 cut(s)	1505, 2667
Bsu15I	ATCGAT	1 cut(s)	636
BsuRI	GGCC	9 cut(s)	158, 470, 1049, 1535, 2430, 2540, 2733, 2811, 3266
BsuTUI	ATCGAT	1 cut(s)	636
BtsCI	GGATG	6 cut(s)	901, 1384, 2315, 2782, 3217, 3253
BtsI	GCAGTG	2 cut(s)	182, 3135
BtsIMutI	CAGTG	8 cut(s)	182, 299, 653, 1207, 1253, 2464, 2803, 3135
CaiI	CAGNNNCTG	1 cut(s)	2183
CciI	TCATGA	2 cut(s)	1618, 2802
CfoI	GCGC	1 cut(s)	2817
Cfr10I	RCCGGY	1 cut(s)	2807
Cfr13I	GGNCC	4 cut(s)	1534, 2062, 2538, 3288
ClaI	ATCGAT	1 cut(s)	636
Csp6I	GTAC	5 cut(s)	324, 452, 1291, 2872, 3187
CspCI	CAANNNNNGTGG	4 cut(s)	1975, 2010, 2878, 2913
CviAII	CATG	8 cut(s)	842, 1294, 1565, 1619, 2297, 2678, 2768, 2803
CviQI	GTAC	5 cut(s)	324, 452, 1291, 2872, 3187
DraI	TTTAAA	1 cut(s)	705
DraIII	CACNNNGTG	1 cut(s)	3055
DrdI	GACNNNNNNGTC	1 cut(s)	2060
DseDI	GACNNNNNNGTC	1 cut(s)	2060
EaeI	YGGCCR	4 cut(s)	468, 2428, 2731, 2809
Eam1104I	CTCTTC	8 cut(s)	412, 516, 1230, 1365, 1406, 1765, 2816, 2943
EarI	CTCTTC	8 cut(s)	412, 516, 1230, 1365, 1406, 1765, 2816, 2943
EciI	GGCGGA	2 cut(s)	2360, 2993
Ecl136II	GAGCTC	1 cut(s)	1391
Eco130I	CCWWGG	3 cut(s)	159, 1530, 2586
Eco147I	AGGCCT	3 cut(s)	158, 1049, 3266
Eco24I	GRGCYC	1 cut(s)	1393
Eco47I	GGWCC	2 cut(s)	2062, 3288
Eco53kI	GAGCTC	1 cut(s)	1391
Eco57I	CTGAAG	6 cut(s)	366, 963, 1347, 1430, 2070, 2424
Eco72I	CACGTG	2 cut(s)	2525, 3203
Eco88I	CYCGRG	2 cut(s)	53, 399
EcoICRI	GAGCTC	1 cut(s)	1391
EcoO109I	RGGNCCY	1 cut(s)	2062
EcoRI	GAATTC	1 cut(s)	460
EcoRII	CCWGG	4 cut(s)	1536, 2118, 2236, 3256
EcoT14I	CCWWGG	3 cut(s)	159, 1530, 2586
EcoT38I	GRGCYC	1 cut(s)	1393
ErhI	CCWWGG	3 cut(s)	159, 1530, 2586
FaeI	CATG	8 cut(s)	845, 1297, 1568, 1622, 2300, 2681, 2771, 2806
FalI	AAGNNNNNCTT	6 cut(s)	685, 717, 1296, 1328, 2359, 2391
FaqI	GGGAC	2 cut(s)	2653, 3079
FatI	CATG	8 cut(s)	841, 1293, 1564, 1618, 2296, 2677, 2767, 2802
FauNDI	CATATG	3 cut(s)	954, 1557, 1963
FbaI	TGATCA	1 cut(s)	874
FblI	GTMKAC	2 cut(s)	1504, 2666
FokI	GGATG	6 cut(s)	908, 1391, 2302, 2789, 3224, 3240
FriOI	GRGCYC	1 cut(s)	1393
GlaI	GCGC	1 cut(s)	2816
GsuI	CTGGAG	3 cut(s)	323, 2160, 2220
HaeIII	GGCC	9 cut(s)	158, 470, 1049, 1535, 2430, 2540, 2733, 2811, 3266
HapII	CCGG	3 cut(s)	1906, 2808, 2881
HhaI	GCGC	1 cut(s)	2817
Hin1I	GRCGYC	1 cut(s)	35
Hin1II	CATG	8 cut(s)	845, 1297, 1568, 1622, 2300, 2681, 2771, 2806
Hin6I	GCGC	1 cut(s)	2815
HinP1I	GCGC	1 cut(s)	2815
HincII	GTYRAC	2 cut(s)	352, 2548
HindII	GTYRAC	2 cut(s)	352, 2548
HpaI	GTTAAC	1 cut(s)	2548
HpaII	CCGG	3 cut(s)	1906, 2808, 2881
HphI	GGTGA	2 cut(s)	2009, 3272
Hpy166II	GTNNAC	8 cut(s)	33, 240, 352, 1505, 2211, 2548, 2667, 2786
Hpy8I	GTNNAC	8 cut(s)	33, 240, 352, 1505, 2211, 2548, 2667, 2786
HpyCH4III	ACNGT	8 cut(s)	1113, 1248, 1994, 2545, 2624, 2790, 2798, 2871
HpyCH4IV	ACGT	3 cut(s)	35, 2524, 3202
HpyF10VI	GCNNNNNNNGC	8 cut(s)	80, 181, 278, 341, 1348, 1580, 1666, 3005
HpySE526I	ACGT	3 cut(s)	35, 2524, 3202
Hsp92I	GRCGYC	1 cut(s)	35
Hsp92II	CATG	8 cut(s)	845, 1297, 1568, 1622, 2300, 2681, 2771, 2806
HspAI	GCGC	1 cut(s)	2815
Kpn2I	TCCGGA	1 cut(s)	2880
Ksp22I	TGATCA	1 cut(s)	874
KspAI	GTTAAC	1 cut(s)	2548
LmnI	GCTCC	7 cut(s)	15, 979, 1159, 1348, 1561, 1843, 3007
Lsp1109I	GCAGC	9 cut(s)	113, 1351, 1870, 2110, 2113, 2855, 2896, 2899, 2986
LweI	GCATC	9 cut(s)	70, 322, 610, 628, 1855, 2413, 2418, 2572, 3202
MaeII	ACGT	3 cut(s)	35, 2524, 3202
MaeIII	GTNAC	8 cut(s)	676, 759, 967, 1113, 1242, 1997, 2105, 2325
MflI	RGATCY	6 cut(s)	210, 425, 610, 804, 1522, 2885
MhlI	GDGCHC	6 cut(s)	412, 582, 1393, 2213, 2263, 2740
MlsI	TGGCCA	2 cut(s)	470, 2430
MluNI	TGGCCA	2 cut(s)	470, 2430
MlyI	GAGTC	3 cut(s)	2261, 3061, 3254
MmeI	TCCRAC	4 cut(s)	846, 873, 1356, 1659
Mox20I	TGGCCA	2 cut(s)	470, 2430
MroI	TCCGGA	1 cut(s)	2880
MroXI	GAANNNNTTC	3 cut(s)	1590, 1614, 2835
MscI	TGGCCA	2 cut(s)	470, 2430
MseI	TTAA	9 cut(s)	234, 704, 1074, 1316, 1746, 1754, 1803, 2477, 2547
MslI	CAYNNNNRTG	2 cut(s)	2457, 3258
Msp20I	TGGCCA	2 cut(s)	470, 2430
MspA1I	CMGCKG	3 cut(s)	1255, 2444, 2846
MspCI	CTTAAG	1 cut(s)	1753
MspI	CCGG	3 cut(s)	1906, 2808, 2881
MspR9I	CCNGG	4 cut(s)	1538, 2120, 2238, 3258
MvaI	CCWGG	4 cut(s)	1538, 2120, 2238, 3258
MwoI	GCNNNNNNNGC	8 cut(s)	80, 181, 278, 341, 1348, 1580, 1666, 3005
NdeI	CATATG	3 cut(s)	954, 1557, 1963
NheI	GCTAGC	4 cut(s)	281, 340, 529, 688
NlaIII	CATG	8 cut(s)	845, 1297, 1568, 1622, 2300, 2681, 2771, 2806
NlaIV	GGNNCC	1 cut(s)	3148
NmuCI	GTSAC	3 cut(s)	967, 1242, 1997
NspI	RCATGY	2 cut(s)	845, 1297
NspV	TTCGAA	2 cut(s)	251, 415
OliI	CACNNNNGTG	1 cut(s)	2457
PaeI	GCATGC	1 cut(s)	845
PaeR7I	CTCGAG	1 cut(s)	399
PagI	TCATGA	2 cut(s)	1618, 2802
PceI	AGGCCT	3 cut(s)	158, 1049, 3266
PdmI	GAANNNNTTC	3 cut(s)	1590, 1614, 2835
PflFI	GACNNNGTC	3 cut(s)	2251, 2798, 2933
PflMI	CCANNNNNTGG	1 cut(s)	2183
PleI	GAGTC	3 cut(s)	2260, 3061, 3253
PmaCI	CACGTG	2 cut(s)	2525, 3203
PmlI	CACGTG	2 cut(s)	2525, 3203
PpsI	GAGTC	3 cut(s)	2260, 3061, 3253
Ppu21I	YACGTR	2 cut(s)	2525, 3203
PpuMI	RGGWCCY	1 cut(s)	2062
Psp124BI	GAGCTC	1 cut(s)	1393
Psp5II	RGGWCCY	1 cut(s)	2062
Psp6I	CCWGG	4 cut(s)	1536, 2118, 2236, 3256
PspCI	CACGTG	2 cut(s)	2525, 3203
PspGI	CCWGG	4 cut(s)	1536, 2118, 2236, 3256
PspN4I	GGNNCC	1 cut(s)	3148
PspPI	GGNCC	4 cut(s)	1534, 2062, 2538, 3288
PspPPI	RGGWCCY	1 cut(s)	2062
PsrI	GAACNNNNNNTAC	2 cut(s)	435, 467
PstNI	CAGNNNCTG	1 cut(s)	2183
PsuI	RGATCY	6 cut(s)	210, 425, 610, 804, 1522, 2885
PsyI	GACNNNGTC	3 cut(s)	2251, 2798, 2933
PvuII	CAGCTG	2 cut(s)	2444, 2846
RsaI	GTAC	5 cut(s)	325, 453, 1292, 2873, 3188
RsaNI	GTAC	5 cut(s)	324, 452, 1291, 2872, 3187
RseI	CAYNNNNRTG	2 cut(s)	2457, 3258
SacI	GAGCTC	1 cut(s)	1393
SaqAI	TTAA	9 cut(s)	234, 704, 1074, 1316, 1746, 1754, 1803, 2477, 2547
Sau96I	GGNCC	4 cut(s)	1534, 2062, 2538, 3288
SchI	GAGTC	3 cut(s)	2261, 3061, 3254
ScrFI	CCNGG	4 cut(s)	1538, 2120, 2238, 3258
SduI	GDGCHC	6 cut(s)	412, 582, 1393, 2213, 2263, 2740
SfaNI	GCATC	9 cut(s)	70, 322, 610, 628, 1855, 2413, 2418, 2572, 3202
Sfr274I	CTCGAG	1 cut(s)	399
SfuI	TTCGAA	2 cut(s)	251, 415
SinI	GGWCC	2 cut(s)	2062, 3288
SlaI	CTCGAG	1 cut(s)	399
SmiMI	CAYNNNNRTG	2 cut(s)	2457, 3258
SmlI	CTYRAG	4 cut(s)	399, 1753, 2748, 3081
SmoI	CTYRAG	4 cut(s)	399, 1753, 2748, 3081
SphI	GCATGC	1 cut(s)	845
SseBI	AGGCCT	3 cut(s)	158, 1049, 3266
SsiI	CCGC	8 cut(s)	1100, 1255, 1490, 1551, 1666, 2345, 2978, 3058
SstI	GAGCTC	1 cut(s)	1393
StuI	AGGCCT	3 cut(s)	158, 1049, 3266
StyD4I	CCNGG	4 cut(s)	1536, 2118, 2236, 3256
StyI	CCWWGG	3 cut(s)	159, 1530, 2586
TaaI	ACNGT	8 cut(s)	1113, 1248, 1994, 2545, 2624, 2790, 2798, 2871
TaiI	ACGT	3 cut(s)	38, 2527, 3205
TaqI	TCGA	9 cut(s)	251, 400, 415, 636, 1216, 1440, 1453, 1896, 3269
TatI	WGTACW	2 cut(s)	1290, 3186
TauI	GCSGC	3 cut(s)	1493, 1553, 1669
Tru1I	TTAA	9 cut(s)	234, 704, 1074, 1316, 1746, 1754, 1803, 2477, 2547
Tru9I	TTAA	9 cut(s)	234, 704, 1074, 1316, 1746, 1754, 1803, 2477, 2547
TscAI	CASTG	8 cut(s)	182, 306, 660, 1207, 1253, 2464, 2803, 3135
TseFI	GTSAC	3 cut(s)	967, 1242, 1997
TseI	GCWGC	9 cut(s)	101, 1339, 1858, 2123, 2126, 2843, 2909, 2912, 2999
Tsp45I	GTSAC	3 cut(s)	967, 1242, 1997
TspGWI	ACGGA	5 cut(s)	203, 1207, 2072, 2737, 2987
TspRI	CASTG	8 cut(s)	182, 306, 660, 1207, 1253, 2464, 2803, 3135
Tth111I	GACNNNGTC	3 cut(s)	2251, 2798, 2933
Van91I	CCANNNNNTGG	1 cut(s)	2183
Vha464I	CTTAAG	1 cut(s)	1753
VneI	GTGCAC	1 cut(s)	2209
VpaK11BI	GGWCC	2 cut(s)	2062, 3288
XapI	RAATTY	4 cut(s)	145, 460, 1622, 3109
XbaI	TCTAGA	2 cut(s)	190, 613
XceI	RCATGY	2 cut(s)	845, 1297
XhoI	CTCGAG	1 cut(s)	399
XmiI	GTMKAC	2 cut(s)	1504, 2666
XmnI	GAANNNNTTC	3 cut(s)	1590, 1614, 2835
ZraI	GACGTC	1 cut(s)	36

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.