AT1G71696

carboxypeptidase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
26966766 .. 26970603
3838 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G71696.2

Sequence Viewer

Length: 1269 bp
ATGGTGTTGTTGATTTTGTTCTTTATTTCTCTCTTTGAGGGTTTTCTGGAACGTGCTTTCAGCATCGGAAAGAGTGTCAATGGATTTCCTTTGTGGGTCATAGAGATTTCAGACAGGCCTGGAGAGATAGAGGCTGAACCTGCATTCAAGTACATTGGGAATGTACATGGAGATGAACCTGTAGGGCGTGAGCTCTTATTACGCCTTGCAAACTGGATTTGTGATAACTATAAGAAGGATCCATTGGCCCAGATGATTGTAGAAAATGTTCACCTTCATATAATGCCATCATTGAATCCTGATGGCTTTTCAATCAGGAAACGTAATAATGCAAATAATGTGGATCTAAATCGCGACTTCCCTGATCAGTTCTTTCCTTTCAATGACGACTTGAATTTGAGGCAACCTGAAACTAAGGCAATTATGACTTGGCTGAGAGATATACGATTCACAGCGTCGGCTACTCTGCACGGGGGTGCGCTGGTCGCAAATTTTCCATGGGATGGTACAGAGGATAAAAGGAAATACTATTATGCATGTCCTGACGATGAGACATTCCGGTTCTTGGCACGTATATATAGCAAATCTCACCGTAATATGTCTTTGAGCAAAGAATTTGAGGAAGGAATCACCAATGGAGCATCCTGGTACCCAATTTATGGTGGCATGCAAGACTGGAATTACATATATGGGGGATGCTTTGAATTGACTCTGGAAATAAGCGACAACAAGTGGCCTAAAGCCTCAGAGCTTTCCACCATTTGGGATTATAATAGAAAGAGCATGCTGAATCTTGTTGCAAGCTTAGTGAAGACAGGAGTTCATGGGCGGATCTTTTCATTAGACAAGGGAAAGCCACTGCCTGGGCTTGTTGTGGTCAAGGGAATTAATTATACGGTTAAAGCTCATCAAACATATGCAGACTATCATCGGTTGCTTGTACCTGGACAGAAATATGAAGTCACAGCATCATCCCCAGGATACAAATCGAAAACAACAACTGTTTGGTTAGGTGAAAACGCTGTTACCGCTGATTTCATTCTCATCCCAGAAACAAGTTCCCGAGGCAATCAACTGAGAAGCAGCTGCGACTGTAGCTGTAAAAGCTGCGGTCAGCCGCTTCTAACGCAATTTTTCACAGAGACAAATAATGGAATCACGCTTACCCTATTCGTGGTTGTAGTGTTCCTTTGTTTTTTGTTGCAAAGAAGGGTGAGATTCAACCTATGGAAGCAAAGACAATCCTCTAGAAGATCAATAACAGTATGA

Protein Analysis

422

Amino Acids

48.23

Weight (kDa)

8.49

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M14 PF00246 72 - 328 5e-63 Zinc carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 771
Acc36I ACCTGC 1 cut(s) 148
Acc65I GGTACC 1 cut(s) 648
AccB1I GGYRCC 1 cut(s) 648
AccB7I CCANNNNNTGG 4 cut(s) 503, 659, 762, 863
AccII CGCG 1 cut(s) 354
AciI CCGC 4 cut(s) 829, 1029, 1110, 1118
AclWI GGATC 4 cut(s) 233, 246, 351, 839
AcsI RAATTY 3 cut(s) 394, 490, 614
AfaI GTAC 5 cut(s) 152, 165, 508, 650, 942
AfiI CCNNNNNNNGG 6 cut(s) 503, 565, 659, 762, 863, 1174
AgsI TTSAA 7 cut(s) 148, 295, 312, 382, 394, 704, 1222
AjnI CCWGG 5 cut(s) 118, 644, 862, 943, 976
AjuI GAANNNNNNNTTGG 2 cut(s) 227, 259
AleI CACNNNNGTG 1 cut(s) 474
AluBI AGCT 7 cut(s) 193, 751, 804, 905, 1086, 1098, 1107
AluI AGCT 7 cut(s) 193, 751, 804, 905, 1086, 1098, 1107
Alw21I GWGCWC 1 cut(s) 195
Alw26I GTCTC 2 cut(s) 545, 1136
AlwI GGATC 4 cut(s) 233, 246, 351, 839
Ama87I CYCGRG 1 cut(s) 1062
AoxI GGCC 3 cut(s) 116, 246, 734
ApeKI GCWGC 3 cut(s) 1083, 1086, 1107
ApoI RAATTY 3 cut(s) 394, 490, 614
AseI ATTAAT 1 cut(s) 888
Asp700I GAANNNNTTC 1 cut(s) 267
Asp718I GGTACC 1 cut(s) 648
AspLEI GCGC 1 cut(s) 481
AspS9I GGNCC 1 cut(s) 247
AsuHPI GGTGA 5 cut(s) 263, 581, 622, 1025, 1225
AvaI CYCGRG 1 cut(s) 1062
BamHI GGATCC 1 cut(s) 238
BanI GGYRCC 1 cut(s) 648
BanII GRGCYC 1 cut(s) 195
BbsI GAAGAC 1 cut(s) 818
Bbv12I GWGCWC 1 cut(s) 195
BbvI GCAGC 3 cut(s) 1073, 1094, 1095
BccI CCATC 3 cut(s) 295, 296, 497
BciT130I CCWGG 5 cut(s) 120, 646, 864, 945, 978
BciVI GTATCC 1 cut(s) 974
BclI TGATCA 1 cut(s) 364
BcoDI GTCTC 2 cut(s) 545, 1136
BfaI CTAG 1 cut(s) 1248
BfmI CTRYAG 2 cut(s) 180, 1093
BfuAI ACCTGC 1 cut(s) 148
BfuI GTATCC 1 cut(s) 974
BisI GCNGC 4 cut(s) 1084, 1087, 1108, 1118
BlsI GCNGC 4 cut(s) 1085, 1088, 1109, 1119
Bme1390I CCNGG 5 cut(s) 120, 646, 864, 945, 978
BmeT110I CYCGRG 1 cut(s) 1062
BmgT120I GGNCC 1 cut(s) 247
BmiI GGNNCC 2 cut(s) 240, 650
BmrFI CCNGG 5 cut(s) 120, 646, 864, 945, 978
BmsI GCATC 4 cut(s) 72, 650, 686, 977
BpiI GAAGAC 1 cut(s) 818
BpmI CTGGAG 1 cut(s) 141
BsaAI YACGTR 1 cut(s) 572
BsaBI GATNNNNATC 2 cut(s) 348, 985
BsaJI CCNNGG 4 cut(s) 497, 863, 976, 1063
BsaWI WCCGGW 1 cut(s) 558
Bsc4I CCNNNNNNNGG 6 cut(s) 503, 565, 659, 762, 863, 1174
Bse1I ACTGG 2 cut(s) 218, 680
Bse8I GATNNNNATC 2 cut(s) 348, 985
BseBI CCWGG 5 cut(s) 120, 646, 864, 945, 978
BseDI CCNNGG 4 cut(s) 497, 863, 976, 1063
BseGI GGATG 5 cut(s) 508, 641, 701, 971, 1044
BseJI GATNNNNATC 2 cut(s) 348, 985
BseLI CCNNNNNNNGG 6 cut(s) 503, 565, 659, 762, 863, 1174
BseMII CTCAG 3 cut(s) 425, 759, 1067
BseNI ACTGG 2 cut(s) 218, 680
BseXI GCAGC 3 cut(s) 1073, 1094, 1095
BsgI GTGCAG 1 cut(s) 452
Bsh1236I CGCG 1 cut(s) 354
BshFI GGCC 3 cut(s) 118, 248, 736
BshNI GGYRCC 1 cut(s) 648
BsiHKAI GWGCWC 1 cut(s) 195
BsiHKCI CYCGRG 1 cut(s) 1062
BsiSI CCGG 1 cut(s) 559
BslI CCNNNNNNNGG 6 cut(s) 503, 565, 659, 762, 863, 1174
BsmAI GTCTC 2 cut(s) 545, 1136
BsmI GAATGC 1 cut(s) 143
BsnI GGCC 3 cut(s) 118, 248, 736
BsoBI CYCGRG 1 cut(s) 1062
Bsp1286I GDGCHC 1 cut(s) 195
Bsp1407I TGTACA 1 cut(s) 163
Bsp143I GATC 5 cut(s) 238, 343, 364, 831, 1253
Bsp19I CCATGG 1 cut(s) 497
Bsp68I TCGCGA 1 cut(s) 354
BspACI CCGC 4 cut(s) 829, 1029, 1110, 1118
BspANI GGCC 3 cut(s) 118, 248, 736
BspCNI CTCAG 3 cut(s) 426, 758, 1068
BspFNI CGCG 1 cut(s) 354
BspLI GGNNCC 2 cut(s) 240, 650
BspMI ACCTGC 1 cut(s) 148
BspPI GGATC 4 cut(s) 233, 246, 351, 839
BspT107I GGYRCC 1 cut(s) 648
BsrGI TGTACA 1 cut(s) 163
BsrI ACTGG 2 cut(s) 218, 680
BssECI CCNNGG 4 cut(s) 497, 863, 976, 1063
BssMI GATC 5 cut(s) 238, 343, 364, 831, 1253
BssT1I CCWWGG 1 cut(s) 497
Bst2UI CCWGG 5 cut(s) 120, 646, 864, 945, 978
Bst4CI ACNGT 5 cut(s) 593, 898, 1003, 1094, 1264
BstAUI TGTACA 1 cut(s) 163
BstBAI YACGTR 1 cut(s) 572
BstC8I GCNNGC 3 cut(s) 668, 785, 802
BstDEI CTNAG 5 cut(s) 414, 434, 745, 805, 1076
BstDSI CCRYGG 1 cut(s) 497
BstF5I GGATG 5 cut(s) 508, 641, 701, 971, 1044
BstFNI CGCG 1 cut(s) 354
BstHHI GCGC 1 cut(s) 481
BstKTI GATC 5 cut(s) 241, 346, 367, 834, 1256
BstMAI GTCTC 2 cut(s) 545, 1136
BstMBI GATC 5 cut(s) 238, 343, 364, 831, 1253
BstMWI GCNNNNNNNGC 6 cut(s) 140, 485, 1028, 1095, 1104, 1126
BstNI CCWGG 5 cut(s) 120, 646, 864, 945, 978
BstNSI RCATGY 3 cut(s) 540, 670, 787
BstSCI CCNGG 5 cut(s) 118, 644, 862, 943, 976
BstSFI CTRYAG 2 cut(s) 180, 1093
BstUI CGCG 1 cut(s) 354
BstV1I GCAGC 3 cut(s) 1073, 1094, 1095
BstV2I GAAGAC 1 cut(s) 818
BstX2I RGATCY 3 cut(s) 238, 343, 831
BstYI RGATCY 3 cut(s) 238, 343, 831
BsuI GTATCC 1 cut(s) 974
BsuRI GGCC 3 cut(s) 118, 248, 736
BtgI CCRYGG 1 cut(s) 497
BtsCI GGATG 5 cut(s) 508, 641, 701, 971, 1044
BtsI GCAGTG 1 cut(s) 857
BtsIMutI CAGTG 1 cut(s) 857
BtuMI TCGCGA 1 cut(s) 354
BveI ACCTGC 1 cut(s) 148
Cac8I GCNNGC 3 cut(s) 668, 785, 802
CfoI GCGC 1 cut(s) 481
Cfr13I GGNCC 1 cut(s) 247
CseI GACGC 1 cut(s) 444
Csp6I GTAC 5 cut(s) 151, 164, 507, 649, 941
CspCI CAANNNNNGTGG 2 cut(s) 321, 356
CviAII CATG 6 cut(s) 167, 498, 537, 667, 784, 824
CviQI GTAC 5 cut(s) 151, 164, 507, 649, 941
DdeI CTNAG 5 cut(s) 414, 434, 745, 805, 1076
DpnI GATC 5 cut(s) 240, 345, 366, 833, 1255
DpnII GATC 5 cut(s) 238, 343, 364, 831, 1253
EciI GGCGGA 1 cut(s) 844
Ecl136II GAGCTC 1 cut(s) 193
Eco130I CCWWGG 1 cut(s) 497
Eco147I AGGCCT 1 cut(s) 118
Eco24I GRGCYC 1 cut(s) 195
Eco53kI GAGCTC 1 cut(s) 193
Eco88I CYCGRG 1 cut(s) 1062
EcoICRI GAGCTC 1 cut(s) 193
EcoRII CCWGG 5 cut(s) 118, 644, 862, 943, 976
EcoT14I CCWWGG 1 cut(s) 497
EcoT22I ATGCAT 1 cut(s) 538
EcoT38I GRGCYC 1 cut(s) 195
ErhI CCWWGG 1 cut(s) 497
FaeI CATG 6 cut(s) 170, 501, 540, 670, 787, 827
FatI CATG 6 cut(s) 166, 497, 536, 666, 783, 823
FauNDI CATATG 1 cut(s) 916
FbaI TGATCA 1 cut(s) 364
Fnu4HI GCNGC 4 cut(s) 1084, 1087, 1108, 1118
FokI GGATG 5 cut(s) 515, 628, 708, 958, 1031
FriOI GRGCYC 1 cut(s) 195
Fsp4HI GCNGC 4 cut(s) 1084, 1087, 1108, 1118
FspBI CTAG 1 cut(s) 1248
GlaI GCGC 1 cut(s) 480
GluI GCNGC 4 cut(s) 1084, 1087, 1108, 1118
GsuI CTGGAG 1 cut(s) 141
HaeIII GGCC 3 cut(s) 118, 248, 736
HapII CCGG 1 cut(s) 559
HgaI GACGC 1 cut(s) 444
HhaI GCGC 1 cut(s) 481
Hin1II CATG 6 cut(s) 170, 501, 540, 670, 787, 827
Hin6I GCGC 1 cut(s) 479
HinP1I GCGC 1 cut(s) 479
HindIII AAGCTT 1 cut(s) 802
HinfI GANTC 7 cut(s) 295, 447, 627, 709, 790, 1155, 1218
HpaII CCGG 1 cut(s) 559
HphI GGTGA 5 cut(s) 263, 581, 622, 1025, 1225
Hpy166II GTNNAC 1 cut(s) 271
Hpy188I TCNGA 3 cut(s) 68, 112, 748
Hpy188III TCNNGA 8 cut(s) 47, 299, 316, 353, 542, 713, 1062, 1248
Hpy8I GTNNAC 1 cut(s) 271
Hpy99I CGWCG 1 cut(s) 460
HpyAV CCTTC 4 cut(s) 229, 284, 617, 1203
HpyCH4III ACNGT 5 cut(s) 593, 898, 1003, 1094, 1264
HpyCH4IV ACGT 3 cut(s) 52, 322, 571
HpyCH4V TGCA 9 cut(s) 143, 209, 332, 469, 536, 670, 800, 920, 1204
HpyF10VI GCNNNNNNNGC 6 cut(s) 140, 485, 1028, 1095, 1104, 1126
HpyF3I CTNAG 5 cut(s) 414, 434, 745, 805, 1076
HpySE526I ACGT 3 cut(s) 52, 322, 571
Hsp92II CATG 6 cut(s) 170, 501, 540, 670, 787, 827
HspAI GCGC 1 cut(s) 479
KpnI GGTACC 1 cut(s) 652
Ksp22I TGATCA 1 cut(s) 364
Kzo9I GATC 5 cut(s) 238, 343, 364, 831, 1253
LmnI GCTCC 1 cut(s) 638
Lsp1109I GCAGC 3 cut(s) 1073, 1094, 1095
LweI GCATC 4 cut(s) 72, 650, 686, 977
MaeI CTAG 1 cut(s) 1248
MaeII ACGT 3 cut(s) 52, 322, 571
MaeIII GTNAC 2 cut(s) 961, 1024
MalI GATC 5 cut(s) 240, 345, 366, 833, 1255
MboI GATC 5 cut(s) 238, 343, 364, 831, 1253
MboII GAAGA 2 cut(s) 823, 1263
MflI RGATCY 3 cut(s) 238, 343, 831
MhlI GDGCHC 1 cut(s) 195
MlyI GAGTC 1 cut(s) 703
MnlI CCTC 8 cut(s) 31, 124, 393, 505, 613, 754, 1058, 1255
Mph1103I ATGCAT 1 cut(s) 538
MroXI GAANNNNTTC 1 cut(s) 267
MseI TTAA 2 cut(s) 888, 900
MslI CAYNNNNRTG 2 cut(s) 171, 474
MspA1I CMGCKG 2 cut(s) 1031, 1086
MspI CCGG 1 cut(s) 559
MspR9I CCNGG 5 cut(s) 120, 646, 864, 945, 978
Mva1269I GAATGC 1 cut(s) 143
MvaI CCWGG 5 cut(s) 120, 646, 864, 945, 978
MvnI CGCG 1 cut(s) 354
MwoI GCNNNNNNNGC 6 cut(s) 140, 485, 1028, 1095, 1104, 1126
NcoI CCATGG 1 cut(s) 497
NdeI CATATG 1 cut(s) 916
NdeII GATC 5 cut(s) 238, 343, 364, 831, 1253
NlaIII CATG 6 cut(s) 170, 501, 540, 670, 787, 827
NlaIV GGNNCC 2 cut(s) 240, 650
NmuCI GTSAC 1 cut(s) 961
NruI TCGCGA 1 cut(s) 354
NsiI ATGCAT 1 cut(s) 538
NspI RCATGY 3 cut(s) 540, 670, 787
OliI CACNNNNGTG 1 cut(s) 474
PaeI GCATGC 2 cut(s) 670, 787
PceI AGGCCT 1 cut(s) 118
PctI GAATGC 1 cut(s) 143
PdmI GAANNNNTTC 1 cut(s) 267
PfeI GAWTC 6 cut(s) 295, 447, 627, 790, 1155, 1218
PflMI CCANNNNNTGG 4 cut(s) 503, 659, 762, 863
PkrI GCNGC 4 cut(s) 1085, 1088, 1109, 1119
PleI GAGTC 1 cut(s) 703
PpsI GAGTC 1 cut(s) 703
Ppu21I YACGTR 1 cut(s) 572
PshBI ATTAAT 1 cut(s) 888
PsiI TTATAA 1 cut(s) 771
Psp124BI GAGCTC 1 cut(s) 195
Psp6I CCWGG 5 cut(s) 118, 644, 862, 943, 976
PspGI CCWGG 5 cut(s) 118, 644, 862, 943, 976
PspN4I GGNNCC 2 cut(s) 240, 650
PspPI GGNCC 1 cut(s) 247
PsrI GAACNNNNNNTAC 2 cut(s) 252, 284
PsuI RGATCY 3 cut(s) 238, 343, 831
PvuII CAGCTG 1 cut(s) 1086
RruI TCGCGA 1 cut(s) 354
RsaI GTAC 5 cut(s) 152, 165, 508, 650, 942
RsaNI GTAC 5 cut(s) 151, 164, 507, 649, 941
RseI CAYNNNNRTG 2 cut(s) 171, 474
SacI GAGCTC 1 cut(s) 195
SaqAI TTAA 2 cut(s) 888, 900
SatI GCNGC 4 cut(s) 1084, 1087, 1108, 1118
Sau3AI GATC 5 cut(s) 238, 343, 364, 831, 1253
Sau96I GGNCC 1 cut(s) 247
SchI GAGTC 1 cut(s) 703
ScrFI CCNGG 5 cut(s) 120, 646, 864, 945, 978
SduI GDGCHC 1 cut(s) 195
SfaNI GCATC 4 cut(s) 72, 650, 686, 977
SfcI CTRYAG 2 cut(s) 180, 1093
SmiMI CAYNNNNRTG 2 cut(s) 171, 474
SphI GCATGC 2 cut(s) 670, 787
SseBI AGGCCT 1 cut(s) 118
SsiI CCGC 4 cut(s) 829, 1029, 1110, 1118
SspMI CTAG 1 cut(s) 1248
SstI GAGCTC 1 cut(s) 195
StuI AGGCCT 1 cut(s) 118
StyD4I CCNGG 5 cut(s) 118, 644, 862, 943, 976
StyI CCWWGG 1 cut(s) 497
TaaI ACNGT 5 cut(s) 593, 898, 1003, 1094, 1264
TaiI ACGT 3 cut(s) 55, 325, 574
TaqI TCGA 1 cut(s) 989
TatI WGTACW 2 cut(s) 150, 163
TauI GCSGC 1 cut(s) 1120
TfiI GAWTC 6 cut(s) 295, 447, 627, 790, 1155, 1218
Tru1I TTAA 2 cut(s) 888, 900
Tru9I TTAA 2 cut(s) 888, 900
TscAI CASTG 1 cut(s) 864
TseFI GTSAC 1 cut(s) 961
TseI GCWGC 3 cut(s) 1083, 1086, 1107
Tsp45I GTSAC 1 cut(s) 961
TspDTI ATGAA 6 cut(s) 189, 266, 812, 828, 972, 1027
TspRI CASTG 1 cut(s) 864
Van91I CCANNNNNTGG 4 cut(s) 503, 659, 762, 863
VspI ATTAAT 1 cut(s) 888
XapI RAATTY 3 cut(s) 394, 490, 614
XbaI TCTAGA 1 cut(s) 1247
XceI RCATGY 3 cut(s) 540, 670, 787
XmnI GAANNNNTTC 1 cut(s) 267
XspI CTAG 1 cut(s) 1248
Zsp2I ATGCAT 1 cut(s) 538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.