Prupe.8G040700_v2.0.a1

Carboxypeptidase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
4060261 .. 4074265
14005 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G040700.1

Sequence Viewer

Length: 1455 bp
ATGAAGCTTGTCTTTTCCATCCTATTCCTCTCTGTCAGTTTTTCTACTTTTCTTCCTCTTGCCATTGCTAGAGGCGGCCTTCATAACTCTAATCCTCCAGGCCTCGAATATGGTCCTCGCACTGGTTCCAGAAGGCACTTGTTTGAGGATGACGAGTCCGAGACACGTGTGGATGTAGCTCAAGGGTACATGACCAACACTGAGCTGGAACGGGCCATTAAGGCATTCGGCCAAAAATGTAGTAACATTTCTAGGGTATACAGTATCGGCGAGAGTGTGAATGGGGTTCCTCTGTGGGTAATAGAAATTTCTGATAAGCCTGGGGAGGAAGAGCCTGAACCTGCATTTAAGTACATTGGAAATGTGCATGGAGATGAACCTGTAGGTCGTGAGCTTCTAATGCTACTAGCAAATTGGATATGTGACAACTATTTGAAAGATCCCTTGGCAACATCGATTGTTGACGGTGTGCATCTTCATATACTGCCGTCTATGAATCCCGATGGGTTTTTATTAAGGAGGCGTGGTAATGCAAATAATATTGATCTTAATCGAGATTTTCCAGACCAGTTCTTTCCGGTGAATGATTATGTGAATGAGCGACAACCTGAAACAAGAGCAATAATGAAGTGGTTGAGAGAGATACAATTTACTGCATCTGCCAGCTTGCATGGGGGTGCACTTGTTGCAAATTATCCATGGGATGGCACTCAGGATAAAAGGAAAAATTACTTTGCATGTCCCGATGACGAAACATTTCGGTTCTTGGCAAGTGTCTATAGTGGCTCTCACCATAACATGTCCTTGAGCAAGGAATTTGAAGGAGGGATTACAAATGGAGCTTCCTGGTATCCTATATATGGAGGCATGCAAGACTGGAACTACATACATGCAGGCTGTTTCGAATTGACATTAGAGATTAGTGACAACAAATGGCCTATTGCTAATGAGCTTCTCACTCTTTGGGAATACAACAAAATGAGCATGCTTAATCTCGTTGCAAGCCTAATCAAGACAGGAGTACATGGAAGAATTTTTTCATCAGATGGTGGGAGGCCGTTGCCAGGCTTTATTGTAATCAAGGGAATAAATTACACGGTTCAAGCTAGCAGAGGAATTGCGGATTACCATCGCTTGCTTGCCTCTGGAGGAAGATATGAAGTCACAGCTTCCGCCCCTGGGTACAAATCAAAGACAACAGGTATCTGGTTGGACAAAGCAGGCACAAATGTAGATTTTGTTCTCGACCCTAATGTTAATCTCAGAGGAATTCCACTTCGAAGCGCATGTGAATGCAGATGGGGCACTAGGAGTGTCATTTGGGATACCCATTTGGAAGTATACTTGCTTTTGATTGTTATTGTAGGATTCCTTTTGTTTTTATGCAAGAGGAGGACATACAGCCGATTAAAACAGAGGCAGTTGGCAGGACCAAAAAGGCCAGTTGTGGTTTGA

Protein Analysis

485

Amino Acids

54.42

Weight (kDa)

6.87

Isoelectric Point (pI)

41.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 349
AccB7I CCANNNNNTGG 1 cut(s) 704
AccI GTMKAC 2 cut(s) 258, 1341
AciI CCGC 3 cut(s) 75, 1121, 1173
AclWI GGATC 1 cut(s) 434
AcoI YGGCCR 1 cut(s) 229
AcsI RAATTY 4 cut(s) 306, 815, 1032, 1269
AcvI CACGTG 1 cut(s) 167
AfaI GTAC 4 cut(s) 188, 353, 1023, 1184
AfiI CCNNNNNNNGG 5 cut(s) 122, 704, 860, 1064, 1179
AflIII ACRYGT 3 cut(s) 164, 166, 798
AgsI TTSAA 3 cut(s) 436, 821, 1103
AjnI CCWGG 5 cut(s) 97, 319, 845, 1063, 1177
AjuI GAANNNNNNNTTGG 2 cut(s) 428, 460
AluBI AGCT 9 cut(s) 7, 179, 205, 394, 666, 842, 952, 1106, 1169
AluI AGCT 9 cut(s) 7, 179, 205, 394, 666, 842, 952, 1106, 1169
Alw21I GWGCWC 1 cut(s) 682
Alw26I GTCTC 1 cut(s) 155
Alw44I GTGCAC 1 cut(s) 678
AlwI GGATC 1 cut(s) 434
AoxI GGCC 7 cut(s) 76, 100, 213, 229, 935, 1055, 1439
ApaLI GTGCAC 1 cut(s) 678
ApoI RAATTY 4 cut(s) 306, 815, 1032, 1269
Asp700I GAANNNNTTC 2 cut(s) 756, 1036
AspLEI GCGC 1 cut(s) 1286
AspS9I GGNCC 3 cut(s) 113, 213, 1430
AsuHPI GGTGA 2 cut(s) 592, 782
AsuII TTCGAA 2 cut(s) 903, 1279
AsuNHI GCTAGC 1 cut(s) 1106
AvaII GGWCC 2 cut(s) 113, 1430
BaeGI GKGCMC 2 cut(s) 682, 1307
BbrPI CACGTG 1 cut(s) 167
Bbv12I GWGCWC 1 cut(s) 682
BccI CCATC 6 cut(s) 26, 497, 698, 1040, 1137, 1293
BceAI ACGGC 2 cut(s) 472, 1042
BciT130I CCWGG 5 cut(s) 99, 321, 847, 1065, 1179
BciVI GTATCC 2 cut(s) 861, 1318
BcoDI GTCTC 1 cut(s) 155
BfaI CTAG 5 cut(s) 69, 252, 407, 1107, 1308
BfmI CTRYAG 2 cut(s) 381, 778
BfuAI ACCTGC 1 cut(s) 349
BfuI GTATCC 2 cut(s) 861, 1318
BglI GCCNNNNNGGC 1 cut(s) 221
BisI GCNGC 1 cut(s) 76
BlsI GCNGC 1 cut(s) 77
Bme1390I CCNGG 5 cut(s) 99, 321, 847, 1065, 1179
Bme18I GGWCC 2 cut(s) 113, 1430
BmgT120I GGNCC 3 cut(s) 113, 213, 1430
BmiI GGNNCC 2 cut(s) 127, 288
BmrFI CCNGG 5 cut(s) 99, 321, 847, 1065, 1179
BmsI GCATC 2 cut(s) 481, 665
BmtI GCTAGC 1 cut(s) 1110
BpmI CTGGAG 2 cut(s) 81, 1167
Bpu14I TTCGAA 2 cut(s) 903, 1279
BpuEI CTTGAG 2 cut(s) 165, 826
Bsa29I ATCGAT 1 cut(s) 455
BsaAI YACGTR 1 cut(s) 167
BsaBI GATNNNNATC 2 cut(s) 549, 1128
BsaJI CCNNGG 5 cut(s) 320, 444, 698, 1177, 1178
BsaWI WCCGGW 1 cut(s) 577
BsaXI ACNNNNNCTCC 2 cut(s) 511, 541
Bsc4I CCNNNNNNNGG 5 cut(s) 122, 704, 860, 1064, 1179
Bse1I ACTGG 4 cut(s) 127, 568, 881, 1442
Bse3DI GCAATG 1 cut(s) 63
Bse8I GATNNNNATC 2 cut(s) 549, 1128
BseBI CCWGG 5 cut(s) 99, 321, 847, 1065, 1179
BseCI ATCGAT 1 cut(s) 455
BseDI CCNNGG 5 cut(s) 320, 444, 698, 1177, 1178
BseGI GGATG 4 cut(s) 18, 154, 178, 709
BseJI GATNNNNATC 2 cut(s) 549, 1128
BseLI CCNNNNNNNGG 5 cut(s) 122, 704, 860, 1064, 1179
BseMI GCAATG 1 cut(s) 63
BseMII CTCAG 3 cut(s) 192, 725, 1276
BseNI ACTGG 4 cut(s) 127, 568, 881, 1442
BseRI GAGGAG 1 cut(s) 1405
BseSI GKGCMC 2 cut(s) 682, 1307
BshFI GGCC 7 cut(s) 78, 102, 215, 231, 937, 1057, 1441
BshVI ATCGAT 1 cut(s) 455
BsiHKAI GWGCWC 1 cut(s) 682
BsiSI CCGG 1 cut(s) 578
BslFI GGGAC 1 cut(s) 726
BslI CCNNNNNNNGG 5 cut(s) 122, 704, 860, 1064, 1179
BsmAI GTCTC 1 cut(s) 155
BsmFI GGGAC 1 cut(s) 726
BsmI GAATGC 2 cut(s) 224, 1298
BsnI GGCC 7 cut(s) 78, 102, 215, 231, 937, 1057, 1441
Bsp119I TTCGAA 2 cut(s) 903, 1279
Bsp1286I GDGCHC 2 cut(s) 682, 1307
Bsp143I GATC 2 cut(s) 439, 544
Bsp19I CCATGG 1 cut(s) 698
BspACI CCGC 3 cut(s) 75, 1121, 1173
BspANI GGCC 7 cut(s) 78, 102, 215, 231, 937, 1057, 1441
BspCNI CTCAG 3 cut(s) 193, 724, 1275
BspDI ATCGAT 1 cut(s) 455
BspLI GGNNCC 2 cut(s) 127, 288
BspMI ACCTGC 1 cut(s) 349
BspOI GCTAGC 1 cut(s) 1110
BspPI GGATC 1 cut(s) 434
BspQI GCTCTTC 1 cut(s) 324
BspT104I TTCGAA 2 cut(s) 903, 1279
BsrDI GCAATG 1 cut(s) 63
BsrI ACTGG 4 cut(s) 127, 568, 881, 1442
BssECI CCNNGG 5 cut(s) 320, 444, 698, 1177, 1178
BssMI GATC 2 cut(s) 439, 544
BssNAI GTATAC 2 cut(s) 259, 1342
BssT1I CCWWGG 2 cut(s) 444, 698
Bst1107I GTATAC 2 cut(s) 259, 1342
Bst2UI CCWGG 5 cut(s) 99, 321, 847, 1065, 1179
Bst4CI ACNGT 3 cut(s) 263, 467, 1099
Bst6I CTCTTC 1 cut(s) 324
BstAPI GCANNNNNTGC 1 cut(s) 686
BstBAI YACGTR 1 cut(s) 167
BstBI TTCGAA 2 cut(s) 903, 1279
BstDEI CTNAG 3 cut(s) 201, 711, 1262
BstDSI CCRYGG 1 cut(s) 698
BstF5I GGATG 4 cut(s) 18, 154, 178, 709
BstHHI GCGC 1 cut(s) 1286
BstKTI GATC 2 cut(s) 442, 547
BstMAI GTCTC 1 cut(s) 155
BstMBI GATC 2 cut(s) 439, 544
BstMWI GCNNNNNNNGC 4 cut(s) 221, 400, 686, 1302
BstNI CCWGG 5 cut(s) 99, 321, 847, 1065, 1179
BstNSI RCATGY 6 cut(s) 741, 802, 871, 893, 988, 1290
BstSCI CCNGG 5 cut(s) 97, 319, 845, 1063, 1177
BstSFI CTRYAG 2 cut(s) 381, 778
BstSLI GKGCMC 2 cut(s) 682, 1307
BstX2I RGATCY 1 cut(s) 439
BstYI RGATCY 1 cut(s) 439
BstZ17I GTATAC 2 cut(s) 259, 1342
Bsu15I ATCGAT 1 cut(s) 455
BsuI GTATCC 2 cut(s) 861, 1318
BsuRI GGCC 7 cut(s) 78, 102, 215, 231, 937, 1057, 1441
BsuTUI ATCGAT 1 cut(s) 455
BtgI CCRYGG 1 cut(s) 698
BtgZI GCGATG 1 cut(s) 1115
BtsCI GGATG 4 cut(s) 18, 154, 178, 709
BtsIMutI CAGTG 2 cut(s) 120, 198
BveI ACCTGC 1 cut(s) 349
CfoI GCGC 1 cut(s) 1286
Cfr13I GGNCC 3 cut(s) 113, 213, 1430
ClaI ATCGAT 1 cut(s) 455
Csp6I GTAC 4 cut(s) 187, 352, 1022, 1183
CviQI GTAC 4 cut(s) 187, 352, 1022, 1183
DdeI CTNAG 3 cut(s) 201, 711, 1262
DpnI GATC 2 cut(s) 441, 546
DpnII GATC 2 cut(s) 439, 544
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 324
EarI CTCTTC 1 cut(s) 324
EciI GGCGGA 1 cut(s) 1162
Eco130I CCWWGG 2 cut(s) 444, 698
Eco147I AGGCCT 1 cut(s) 102
Eco47I GGWCC 2 cut(s) 113, 1430
Eco72I CACGTG 1 cut(s) 167
EcoRI GAATTC 1 cut(s) 1269
EcoRII CCWGG 5 cut(s) 97, 319, 845, 1063, 1177
EcoT14I CCWWGG 2 cut(s) 444, 698
ErhI CCWWGG 2 cut(s) 444, 698
FalI AAGNNNNNCTT 1 cut(s) 28
FaqI GGGAC 1 cut(s) 726
FblI GTMKAC 2 cut(s) 258, 1341
Fnu4HI GCNGC 1 cut(s) 76
FokI GGATG 4 cut(s) 5, 161, 185, 716
Fsp4HI GCNGC 1 cut(s) 76
FspBI CTAG 5 cut(s) 69, 252, 407, 1107, 1308
GlaI GCGC 1 cut(s) 1285
GluI GCNGC 1 cut(s) 76
GsuI CTGGAG 2 cut(s) 81, 1167
HaeIII GGCC 7 cut(s) 78, 102, 215, 231, 937, 1057, 1441
HapII CCGG 1 cut(s) 578
HhaI GCGC 1 cut(s) 1286
Hin6I GCGC 1 cut(s) 1284
HinP1I GCGC 1 cut(s) 1284
HincII GTYRAC 1 cut(s) 463
HindII GTYRAC 1 cut(s) 463
HindIII AAGCTT 1 cut(s) 5
HinfI GANTC 3 cut(s) 155, 496, 1368
HpaII CCGG 1 cut(s) 578
HphI GGTGA 2 cut(s) 592, 782
Hpy166II GTNNAC 4 cut(s) 259, 463, 680, 1342
Hpy188I TCNGA 4 cut(s) 160, 313, 1045, 1265
Hpy8I GTNNAC 4 cut(s) 259, 463, 680, 1342
HpyAV CCTTC 3 cut(s) 89, 126, 815
HpyCH4III ACNGT 3 cut(s) 263, 467, 1099
HpyCH4IV ACGT 1 cut(s) 166
HpyF10VI GCNNNNNNNGC 4 cut(s) 221, 400, 686, 1302
HpyF3I CTNAG 3 cut(s) 201, 711, 1262
HpySE526I ACGT 1 cut(s) 166
HspAI GCGC 1 cut(s) 1284
Kzo9I GATC 2 cut(s) 439, 544
LguI GCTCTTC 1 cut(s) 324
LmnI GCTCC 1 cut(s) 839
LweI GCATC 2 cut(s) 481, 665
MaeI CTAG 5 cut(s) 69, 252, 407, 1107, 1308
MaeII ACGT 1 cut(s) 166
MaeIII GTNAC 4 cut(s) 242, 422, 923, 1162
MalI GATC 2 cut(s) 441, 546
MboI GATC 2 cut(s) 439, 544
MboII GAAGA 5 cut(s) 44, 341, 467, 1041, 1164
MflI RGATCY 1 cut(s) 439
MhlI GDGCHC 2 cut(s) 682, 1307
MlyI GAGTC 1 cut(s) 164
MmeI TCCRAC 1 cut(s) 1191
MroXI GAANNNNTTC 2 cut(s) 756, 1036
MseI TTAA 7 cut(s) 219, 348, 515, 549, 990, 1257, 1409
MslI CAYNNNNRTG 3 cut(s) 372, 675, 1291
MspI CCGG 1 cut(s) 578
MspR9I CCNGG 5 cut(s) 99, 321, 847, 1065, 1179
Mva1269I GAATGC 2 cut(s) 224, 1298
MvaI CCWGG 5 cut(s) 99, 321, 847, 1065, 1179
MwoI GCNNNNNNNGC 4 cut(s) 221, 400, 686, 1302
NcoI CCATGG 1 cut(s) 698
NdeII GATC 2 cut(s) 439, 544
NheI GCTAGC 1 cut(s) 1106
NlaIV GGNNCC 2 cut(s) 127, 288
NmuCI GTSAC 3 cut(s) 422, 923, 1162
NspI RCATGY 6 cut(s) 741, 802, 871, 893, 988, 1290
NspV TTCGAA 2 cut(s) 903, 1279
PaeI GCATGC 2 cut(s) 871, 988
PasI CCCWGGG 1 cut(s) 1178
PceI AGGCCT 1 cut(s) 102
PciI ACATGT 1 cut(s) 798
PciSI GCTCTTC 1 cut(s) 324
PctI GAATGC 2 cut(s) 224, 1298
PdmI GAANNNNTTC 2 cut(s) 756, 1036
PfeI GAWTC 2 cut(s) 496, 1368
PflMI CCANNNNNTGG 1 cut(s) 704
PkrI GCNGC 1 cut(s) 77
PleI GAGTC 1 cut(s) 163
PmaCI CACGTG 1 cut(s) 167
PmlI CACGTG 1 cut(s) 167
PpsI GAGTC 1 cut(s) 163
Ppu21I YACGTR 1 cut(s) 167
PscI ACATGT 1 cut(s) 798
Psp6I CCWGG 5 cut(s) 97, 319, 845, 1063, 1177
PspCI CACGTG 1 cut(s) 167
PspGI CCWGG 5 cut(s) 97, 319, 845, 1063, 1177
PspN4I GGNNCC 2 cut(s) 127, 288
PspPI GGNCC 3 cut(s) 113, 213, 1430
PsrI GAACNNNNNNTAC 2 cut(s) 1224, 1256
PsuI RGATCY 1 cut(s) 439
RsaI GTAC 4 cut(s) 188, 353, 1023, 1184
RsaNI GTAC 4 cut(s) 187, 352, 1022, 1183
RseI CAYNNNNRTG 3 cut(s) 372, 675, 1291
SapI GCTCTTC 1 cut(s) 324
SaqAI TTAA 7 cut(s) 219, 348, 515, 549, 990, 1257, 1409
SatI GCNGC 1 cut(s) 76
Sau3AI GATC 2 cut(s) 439, 544
Sau96I GGNCC 3 cut(s) 113, 213, 1430
SchI GAGTC 1 cut(s) 164
ScrFI CCNGG 5 cut(s) 99, 321, 847, 1065, 1179
SduI GDGCHC 2 cut(s) 682, 1307
SfaNI GCATC 2 cut(s) 481, 665
SfcI CTRYAG 2 cut(s) 381, 778
SfuI TTCGAA 2 cut(s) 903, 1279
SinI GGWCC 2 cut(s) 113, 1430
SmiMI CAYNNNNRTG 3 cut(s) 372, 675, 1291
SmlI CTYRAG 2 cut(s) 180, 805
SmoI CTYRAG 2 cut(s) 180, 805
SphI GCATGC 2 cut(s) 871, 988
SseBI AGGCCT 1 cut(s) 102
SsiI CCGC 3 cut(s) 75, 1121, 1173
SspI AATATT 1 cut(s) 541
SspMI CTAG 5 cut(s) 69, 252, 407, 1107, 1308
StuI AGGCCT 1 cut(s) 102
StyD4I CCNGG 5 cut(s) 97, 319, 845, 1063, 1177
StyI CCWWGG 2 cut(s) 444, 698
TaaI ACNGT 3 cut(s) 263, 467, 1099
TaiI ACGT 1 cut(s) 169
TaqI TCGA 6 cut(s) 105, 455, 553, 903, 1245, 1279
TatI WGTACW 2 cut(s) 351, 1021
TauI GCSGC 1 cut(s) 78
TfiI GAWTC 2 cut(s) 496, 1368
Tru1I TTAA 7 cut(s) 219, 348, 515, 549, 990, 1257, 1409
Tru9I TTAA 7 cut(s) 219, 348, 515, 549, 990, 1257, 1409
TscAI CASTG 2 cut(s) 127, 205
TseFI GTSAC 3 cut(s) 422, 923, 1162
Tsp45I GTSAC 3 cut(s) 422, 923, 1162
TspDTI ATGAA 8 cut(s) 17, 71, 390, 467, 509, 641, 1029, 1173
TspRI CASTG 2 cut(s) 127, 205
Van91I CCANNNNNTGG 1 cut(s) 704
VneI GTGCAC 1 cut(s) 678
VpaK11BI GGWCC 2 cut(s) 113, 1430
XapI RAATTY 4 cut(s) 306, 815, 1032, 1269
XceI RCATGY 6 cut(s) 741, 802, 871, 893, 988, 1290
XcmI CCANNNNNNNNNTGG 1 cut(s) 202
XmiI GTMKAC 2 cut(s) 258, 1341
XmnI GAANNNNTTC 2 cut(s) 756, 1036
XspI CTAG 5 cut(s) 69, 252, 407, 1107, 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.