Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0006544

Physical Location & Seq

Genomic Coordinates Forward (+)

4114904 .. 4115870

Gene Structure 967 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G040900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 324 bp

ATGAGAGGTGCAGATGCACCTCCTTGCGCCTTAATAGATCCGCCACTGCCTGGGTACAAATCAAAGACAACAGGTATCTGGTTGGACAAAGCAGGCACAAATGTAGATTTTGTTCTCGACCCTAATGTCAATCGCGGAGGAATTCCACTTCGAAGTGCATGTGAATGCAGATGGGGCACTAGGAGTGTCATTTGGGATACCTATTTGGAAGTATACTTGCTTTTGATTGTTATTGTGGGATTCCTTTTGTTTTTATGCAAGAGGACATACAGCCGATTAAAACAGAGGCAGTTGGCAGGACCAAAAAGGCCAGTTGTGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004180 GO:0004181 GO:0004185 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008236 GO:0008237 GO:0008238 GO:0009987 GO:0010008 GO:0010467 GO:0012505 GO:0016020 GO:0016485 GO:0016787 GO:0017171 GO:0019538 GO:0019899 GO:0019902 GO:0019903 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044237 GO:0044238 GO:0044421 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0048471 GO:0051604 GO:0051721 GO:0070008 GO:0070011 GO:0071704 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M14

Protein Analysis

108

Amino Acids

11.96

Weight (kDa)

9.59

Isoelectric Point (pI)

38.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006544)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71696 AT1G71696
fragaria_vesca	FvH4_2g13020 FvH4_2g13020
malus_domestica	MD05G1033700.v1.1 MD10G1034600.v1.1
prunus_persica	Prupe.8G040700_v2.0.a1 Prupe.8G040700_v2.0.a1 Prupe.8G040700_v2.0.a1 Prupe.8G040700_v2.0.a1 Prupe.8G040900_v2.0.a1
pyrus_communis	pycom05g02430 pycom10g02360 pycom10g02380
rosa_chinensis	RchiOBHm_Chr6g0274201
rosa_laevigata	RLG00000013571
rosa_multiflora	Rmu_sc0001939.1_g000004
rosa_roxburghii	Rroxscaffold_7G00194410
rosa_rugosa	Rorug06G0079800 Rorug06G0079900 Rorug06G0080000
rosa_samantha	Rh6AG195000 Rh6BG199300 Rh6CG199500 Rh6DG191000
rosa_wichuraiana	Rw6G017060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	125
AccB7I	CCANNNNNTGG	1 cut(s)	50
AccI	GTMKAC	1 cut(s)	213
AccII	CGCG	1 cut(s)	135
AciI	CCGC	2 cut(s)	41, 135
AclWI	GGATC	1 cut(s)	32
AcsI	RAATTY	1 cut(s)	141
AfaI	GTAC	1 cut(s)	56
AfiI	CCNNNNNNNGG	1 cut(s)	50
AjnI	CCWGG	1 cut(s)	49
AlwI	GGATC	1 cut(s)	32
AoxI	GGCC	1 cut(s)	308
ApoI	RAATTY	1 cut(s)	141
AspLEI	GCGC	1 cut(s)	29
AspS9I	GGNCC	1 cut(s)	299
AsuII	TTCGAA	1 cut(s)	151
AvaII	GGWCC	1 cut(s)	299
BaeGI	GKGCMC	1 cut(s)	179
BccI	CCATC	1 cut(s)	165
BciT130I	CCWGG	1 cut(s)	51
BciVI	GTATCC	1 cut(s)	190
BfaI	CTAG	1 cut(s)	180
BfuI	GTATCC	1 cut(s)	190
Bme1390I	CCNGG	1 cut(s)	51
Bme18I	GGWCC	1 cut(s)	299
BmgT120I	GGNCC	1 cut(s)	299
BmrFI	CCNGG	1 cut(s)	51
BmsI	GCATC	1 cut(s)	4
Bpu14I	TTCGAA	1 cut(s)	151
BsaJI	CCNNGG	1 cut(s)	50
Bsc4I	CCNNNNNNNGG	1 cut(s)	50
Bse1I	ACTGG	1 cut(s)	311
BseBI	CCWGG	1 cut(s)	51
BseDI	CCNNGG	1 cut(s)	50
BseLI	CCNNNNNNNGG	1 cut(s)	50
BseNI	ACTGG	1 cut(s)	311
BseSI	GKGCMC	1 cut(s)	179
BsgI	GTGCAG	1 cut(s)	30
Bsh1236I	CGCG	1 cut(s)	135
BshFI	GGCC	1 cut(s)	310
BslI	CCNNNNNNNGG	1 cut(s)	50
BsmI	GAATGC	1 cut(s)	170
BsnI	GGCC	1 cut(s)	310
Bsp119I	TTCGAA	1 cut(s)	151
Bsp1286I	GDGCHC	1 cut(s)	179
Bsp143I	GATC	1 cut(s)	37
BspACI	CCGC	2 cut(s)	41, 135
BspANI	GGCC	1 cut(s)	310
BspFNI	CGCG	1 cut(s)	135
BspPI	GGATC	1 cut(s)	32
BspT104I	TTCGAA	1 cut(s)	151
BsrI	ACTGG	1 cut(s)	311
BssECI	CCNNGG	1 cut(s)	50
BssMI	GATC	1 cut(s)	37
BssNAI	GTATAC	1 cut(s)	214
Bst1107I	GTATAC	1 cut(s)	214
Bst2UI	CCWGG	1 cut(s)	51
BstBI	TTCGAA	1 cut(s)	151
BstC8I	GCNNGC	1 cut(s)	94
BstFNI	CGCG	1 cut(s)	135
BstHHI	GCGC	1 cut(s)	29
BstKTI	GATC	1 cut(s)	40
BstMBI	GATC	1 cut(s)	37
BstMWI	GCNNNNNNNGC	1 cut(s)	174
BstNI	CCWGG	1 cut(s)	51
BstNSI	RCATGY	1 cut(s)	162
BstSCI	CCNGG	1 cut(s)	49
BstSLI	GKGCMC	1 cut(s)	179
BstUI	CGCG	1 cut(s)	135
BstX2I	RGATCY	1 cut(s)	37
BstYI	RGATCY	1 cut(s)	37
BstZ17I	GTATAC	1 cut(s)	214
BsuI	GTATCC	1 cut(s)	190
BsuRI	GGCC	1 cut(s)	310
BtsI	GCAGTG	1 cut(s)	44
BtsIMutI	CAGTG	1 cut(s)	44
Cac8I	GCNNGC	1 cut(s)	94
CfoI	GCGC	1 cut(s)	29
Cfr13I	GGNCC	1 cut(s)	299
Csp6I	GTAC	1 cut(s)	55
CviAII	CATG	1 cut(s)	159
CviJI	RGCY	2 cut(s)	273, 310
CviKI_1	RGCY	2 cut(s)	273, 310
CviQI	GTAC	1 cut(s)	55
DpnI	GATC	1 cut(s)	39
DpnII	GATC	1 cut(s)	37
DrdI	GACNNNNNNGTC	1 cut(s)	125
DseDI	GACNNNNNNGTC	1 cut(s)	125
EciI	GGCGGA	1 cut(s)	30
Eco47I	GGWCC	1 cut(s)	299
EcoRI	GAATTC	1 cut(s)	141
EcoRII	CCWGG	1 cut(s)	49
FaeI	CATG	1 cut(s)	162
FaiI	YATR	4 cut(s)	160, 214, 256, 268
FatI	CATG	1 cut(s)	158
FblI	GTMKAC	1 cut(s)	213
FspBI	CTAG	1 cut(s)	180
GlaI	GCGC	1 cut(s)	28
HaeIII	GGCC	1 cut(s)	310
HhaI	GCGC	1 cut(s)	29
Hin1II	CATG	1 cut(s)	162
Hin6I	GCGC	1 cut(s)	27
HinP1I	GCGC	1 cut(s)	27
HinfI	GANTC	1 cut(s)	240
Hpy166II	GTNNAC	1 cut(s)	214
Hpy188III	TCNNGA	1 cut(s)	116
Hpy8I	GTNNAC	1 cut(s)	214
HpyCH4V	TGCA	5 cut(s)	11, 17, 158, 168, 258
HpyF10VI	GCNNNNNNNGC	1 cut(s)	174
Hsp92II	CATG	1 cut(s)	162
HspAI	GCGC	1 cut(s)	27
Kzo9I	GATC	1 cut(s)	37
LpnPI	CCDG	6 cut(s)	36, 57, 63, 64, 78, 282
LweI	GCATC	1 cut(s)	4
MaeI	CTAG	1 cut(s)	180
MalI	GATC	1 cut(s)	39
MboI	GATC	1 cut(s)	37
MflI	RGATCY	1 cut(s)	37
MhlI	GDGCHC	1 cut(s)	179
MluCI	AATT	1 cut(s)	141
MmeI	TCCRAC	1 cut(s)	63
MnlI	CCTC	4 cut(s)	30, 131, 255, 279
MseI	TTAA	2 cut(s)	32, 278
MslI	CAYNNNNRTG	1 cut(s)	163
MspR9I	CCNGG	1 cut(s)	51
Mva1269I	GAATGC	1 cut(s)	170
MvaI	CCWGG	1 cut(s)	51
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	1 cut(s)	174
NdeII	GATC	1 cut(s)	37
NlaIII	CATG	1 cut(s)	162
NspI	RCATGY	1 cut(s)	162
NspV	TTCGAA	1 cut(s)	151
PctI	GAATGC	1 cut(s)	170
PfeI	GAWTC	1 cut(s)	240
PflMI	CCANNNNNTGG	1 cut(s)	50
Psp6I	CCWGG	1 cut(s)	49
PspGI	CCWGG	1 cut(s)	49
PspPI	GGNCC	1 cut(s)	299
PsrI	GAACNNNNNNTAC	2 cut(s)	96, 128
PsuI	RGATCY	1 cut(s)	37
RsaI	GTAC	1 cut(s)	56
RsaNI	GTAC	1 cut(s)	55
RseI	CAYNNNNRTG	1 cut(s)	163
SaqAI	TTAA	2 cut(s)	32, 278
Sau3AI	GATC	1 cut(s)	37
Sau96I	GGNCC	1 cut(s)	299
ScrFI	CCNGG	1 cut(s)	51
SduI	GDGCHC	1 cut(s)	179
SetI	ASST	4 cut(s)	10, 22, 76, 203
SfaNI	GCATC	1 cut(s)	4
SfuI	TTCGAA	1 cut(s)	151
SinI	GGWCC	1 cut(s)	299
SmiMI	CAYNNNNRTG	1 cut(s)	163
Sse9I	AATT	1 cut(s)	141
SsiI	CCGC	2 cut(s)	41, 135
SspMI	CTAG	1 cut(s)	180
StyD4I	CCNGG	1 cut(s)	49
TaqI	TCGA	2 cut(s)	117, 151
TasI	AATT	1 cut(s)	141
TfiI	GAWTC	1 cut(s)	240
Tru1I	TTAA	2 cut(s)	32, 278
Tru9I	TTAA	2 cut(s)	32, 278
TscAI	CASTG	1 cut(s)	51
TspRI	CASTG	1 cut(s)	51
Van91I	CCANNNNNTGG	1 cut(s)	50
VpaK11BI	GGWCC	1 cut(s)	299
XapI	RAATTY	1 cut(s)	141
XceI	RCATGY	1 cut(s)	162
XmiI	GTMKAC	1 cut(s)	213
XspI	CTAG	1 cut(s)	180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.