pycom10g02380

Carboxypeptidase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
2628893 .. 2629379
487 bp
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UTR
Exon/CDS
Intron
pycom10g02380.2

Sequence Viewer

Length: 258 bp
ATGAAGCTTGCTCCTTCCATCCTCTTCCTCTCTCTCAGCTTCTCCTCTTTTCTTCGTCCTGCCACTGCTAGAGGCGGCCTTCACAGTTCCTACCCTCCAGACTTGTGCCAAACGGTAGTTAATTGTGATCAGATAGATTATCACGCCTGTTGCTTTCTTAAAATCTTTACAGTTAAGGTTTCGAATTTGGTCCTCGCGCTGGTTCCAGCAGGCAATTGTTTGAAGTTAATGAGTCTCAGACGCGGCATTTATCACTAA

Protein Analysis

86

Amino Acids

9.37

Weight (kDa)

9.2

Isoelectric Point (pI)

51.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 197, 243
AciI CCGC 2 cut(s) 75, 243
AcsI RAATTY 1 cut(s) 184
AfiI CCNNNNNNNGG 1 cut(s) 199
AgsI TTSAA 1 cut(s) 223
AluBI AGCT 2 cut(s) 7, 39
AluI AGCT 2 cut(s) 7, 39
Alw26I GTCTC 1 cut(s) 239
AoxI GGCC 1 cut(s) 76
ApoI RAATTY 1 cut(s) 184
AspLEI GCGC 1 cut(s) 199
AspS9I GGNCC 1 cut(s) 190
AsuII TTCGAA 1 cut(s) 182
AvaII GGWCC 1 cut(s) 190
BccI CCATC 1 cut(s) 26
BclI TGATCA 1 cut(s) 127
BcoDI GTCTC 1 cut(s) 239
BfaI CTAG 1 cut(s) 69
BisI GCNGC 2 cut(s) 76, 244
BlsI GCNGC 2 cut(s) 77, 245
Bme18I GGWCC 1 cut(s) 190
BmgT120I GGNCC 1 cut(s) 190
BmiI GGNNCC 1 cut(s) 204
BpmI CTGGAG 1 cut(s) 81
Bpu14I TTCGAA 1 cut(s) 182
Bsc4I CCNNNNNNNGG 1 cut(s) 199
BseGI GGATG 1 cut(s) 18
BseLI CCNNNNNNNGG 1 cut(s) 199
BseMII CTCAG 2 cut(s) 49, 250
BseRI GAGGAG 1 cut(s) 34
Bsh1236I CGCG 2 cut(s) 197, 243
BshFI GGCC 1 cut(s) 78
BslI CCNNNNNNNGG 1 cut(s) 199
BsmAI GTCTC 1 cut(s) 239
BsnI GGCC 1 cut(s) 78
Bsp119I TTCGAA 1 cut(s) 182
Bsp143I GATC 1 cut(s) 127
BspACI CCGC 2 cut(s) 75, 243
BspANI GGCC 1 cut(s) 78
BspCNI CTCAG 2 cut(s) 48, 249
BspFNI CGCG 2 cut(s) 197, 243
BspLI GGNNCC 1 cut(s) 204
BspT104I TTCGAA 1 cut(s) 182
BssMI GATC 1 cut(s) 127
Bst4CI ACNGT 3 cut(s) 86, 115, 172
Bst6I CTCTTC 1 cut(s) 29
BstBI TTCGAA 1 cut(s) 182
BstC8I GCNNGC 2 cut(s) 9, 211
BstDEI CTNAG 2 cut(s) 35, 236
BstF5I GGATG 1 cut(s) 18
BstFNI CGCG 2 cut(s) 197, 243
BstHHI GCGC 1 cut(s) 199
BstKTI GATC 1 cut(s) 130
BstMAI GTCTC 1 cut(s) 239
BstMBI GATC 1 cut(s) 127
BstUI CGCG 2 cut(s) 197, 243
BsuRI GGCC 1 cut(s) 78
BtsCI GGATG 1 cut(s) 18
BtsI GCAGTG 1 cut(s) 63
BtsIMutI CAGTG 1 cut(s) 63
Cac8I GCNNGC 2 cut(s) 9, 211
CfoI GCGC 1 cut(s) 199
Cfr13I GGNCC 1 cut(s) 190
CseI GACGC 1 cut(s) 249
CviJI RGCY 3 cut(s) 7, 39, 78
CviKI_1 RGCY 3 cut(s) 7, 39, 78
DdeI CTNAG 2 cut(s) 35, 236
DpnI GATC 1 cut(s) 129
DpnII GATC 1 cut(s) 127
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
Eco47I GGWCC 1 cut(s) 190
FbaI TGATCA 1 cut(s) 127
Fnu4HI GCNGC 2 cut(s) 76, 244
FokI GGATG 1 cut(s) 5
Fsp4HI GCNGC 2 cut(s) 76, 244
FspBI CTAG 1 cut(s) 69
GlaI GCGC 1 cut(s) 198
GluI GCNGC 2 cut(s) 76, 244
GsuI CTGGAG 1 cut(s) 81
HaeIII GGCC 1 cut(s) 78
HgaI GACGC 1 cut(s) 249
HhaI GCGC 1 cut(s) 199
Hin6I GCGC 1 cut(s) 197
HinP1I GCGC 1 cut(s) 197
HindIII AAGCTT 1 cut(s) 5
HinfI GANTC 1 cut(s) 232
Hpy188I TCNGA 2 cut(s) 132, 239
Hpy188III TCNNGA 1 cut(s) 98
HpyAV CCTTC 2 cut(s) 24, 89
HpyCH4III ACNGT 3 cut(s) 86, 115, 172
HpyF3I CTNAG 2 cut(s) 35, 236
HspAI GCGC 1 cut(s) 197
Ksp22I TGATCA 1 cut(s) 127
Kzo9I GATC 1 cut(s) 127
LmnI GCTCC 1 cut(s) 16
LpnPI CCDG 6 cut(s) 72, 111, 160, 185, 195, 219
MaeI CTAG 1 cut(s) 69
MalI GATC 1 cut(s) 129
MboI GATC 1 cut(s) 127
MboII GAAGA 2 cut(s) 16, 44
MfeI CAATTG 1 cut(s) 214
MluCI AATT 3 cut(s) 121, 184, 214
MlyI GAGTC 1 cut(s) 241
MnlI CCTC 6 cut(s) 32, 38, 55, 65, 105, 203
MseI TTAA 4 cut(s) 120, 159, 174, 227
MunI CAATTG 1 cut(s) 214
MvnI CGCG 2 cut(s) 197, 243
NdeII GATC 1 cut(s) 127
NlaIV GGNNCC 1 cut(s) 204
NspV TTCGAA 1 cut(s) 182
PkrI GCNGC 2 cut(s) 77, 245
PleI GAGTC 1 cut(s) 240
PpsI GAGTC 1 cut(s) 240
PspN4I GGNNCC 1 cut(s) 204
PspPI GGNCC 1 cut(s) 190
SaqAI TTAA 4 cut(s) 120, 159, 174, 227
SatI GCNGC 2 cut(s) 76, 244
Sau3AI GATC 1 cut(s) 127
Sau96I GGNCC 1 cut(s) 190
SchI GAGTC 1 cut(s) 241
SetI ASST 3 cut(s) 9, 41, 180
SfuI TTCGAA 1 cut(s) 182
SinI GGWCC 1 cut(s) 190
Sse9I AATT 3 cut(s) 121, 184, 214
SsiI CCGC 2 cut(s) 75, 243
SspMI CTAG 1 cut(s) 69
TaaI ACNGT 3 cut(s) 86, 115, 172
TaqI TCGA 1 cut(s) 182
TasI AATT 3 cut(s) 121, 184, 214
TauI GCSGC 2 cut(s) 78, 246
Tru1I TTAA 4 cut(s) 120, 159, 174, 227
Tru9I TTAA 4 cut(s) 120, 159, 174, 227
TscAI CASTG 1 cut(s) 70
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 70
VpaK11BI GGWCC 1 cut(s) 190
XapI RAATTY 1 cut(s) 184
XspI CTAG 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.