Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012291

Physical Location & Seq

Genomic Coordinates Reverse (-)

26990525 .. 26994259

Gene Structure 3735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G71770.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGGCTGCGGCGGTTGCATCTGGAATTGCCCCGACGACGGCCATGGTTGATCAAGTGATCCCTAATCAACCCACGGTTGCTGCTGCTGCTCCTCCTCCTTTCCCTGCCGTGAGTCAGGTTGCGGCGGTTGCTGCTGCTGCTGCTGCCGCGGAGGCTTTGCAAACCCATCCAAACTCGTCTCTCTATGTCGGAGATTTAGATCCGAGTGTCAATGAGTCACATCTCTTGGATCTCTTTAATCAAGTTGCTCCAGTTCACAATCTTAGGGTTTGTCGTGATCTGACTCATCGTTCTCTTGGTTACGCTTACGTCAATTTCGCTAACCCTGAAGATGCGAGTCGTGCGATGGAAAGTCTCAACTATGCTCCGATCAGAGACAGGCCTATAAGGATCATGCTCTCTAATCGTGATCCGAGCACTAGATTGAGTGGGAAAGGCAATGTTTTCATCAAAAACCTTGATGCATCGATTGATAACAAAGCTTTGTATGAAACTTTCTCGTCTTTCGGGACGATTCTCTCTTGCAAGGTTGCAATGGATGTGGTGGGACGTTCGAAAGGATATGGCTTTGTCCAGTTTGAGAAAGAGGAAACCGCTCAGGCTGCTATTGACAAGCTTAATGGTATGTTGCTTAATGATAAGCAAGTCTTTGTTGGCCATTTTGTCCGTCGTCAAGACAGGGCACGTAGTGAGAGTGGTGCGGTGCCGAGCTTCACTAACGTTTATGTTAAGAATCTTCCTAAGGAGATTACTGATGATGAGCTTAAGAAGACTTTTGGGAAATATGGAGATATTTCTAGTGCGGTTGTGATGAAGGATCAGAGTGGGAACTCGAGGTCTTTCGGGTTTGTCAACTTTGTGAGCCCTGAAGCTGCTGCAGTTGCTGTTGAAAAGATGAACGGTATCAGCCTTGGGGAGGATGTGTTGTATGTTGGTAGGGCACAGAAGAAGTCTGATAGGGAAGAGGAATTGAGGAGGAAGTTTGAGCAAGAGAGGATAAGCAGGTTTGAGAAATTGCAAGGATCGAATCTGTATTTGAAGAACCTTGATGATAGTGTGAATGATGAGAAGCTCAAGGAGATGTTCTCTGAGTATGGGAATGTGACTTCCTGCAAGGTTATGATGAATTCACAAGGTTTAAGCAGAGGTTTTGGTTTTGTTGCTTACTCCAATCCTGAAGAAGCTTTATTAGCTATGAAAGAAATGAATGGGAAGATGATAGGAAGGAAACCTCTTTACGTTGCTTTGGCACAACGTAAGGAAGAAAGACAGGCTCACCTTCAGAGTCTATTTACTCAAATCAGATCACCTGGAACAATGTCACCAGTTCCATCACCGATGTCTGGGTTCCATCATCACCCACCAGGTGGGCCAATGTCAGGACCACACCATCCAATGTTCATAGGCCATAACGGTCAAGGTTTGGTACCTTCACAGCCTATGGGGTATGGGTACCAAGTTCAGTTCATGCCTGGGATGCGTCCAGGTGCAGGCCCGCCTAACTTCATGATGCCTTTCCCTCTTCAAAGGCAAACTCAGCCTGGCCCTCGTGTTGGGTTCAGGCGTGGTGCTAATAACATGCAGCAGCAGTTTCAGCAACAACAAATGCTGCAGCAAAATGCAAGCAGATTCATGGGAGGCGCAGGCAACAGGAGGAATGGAATGGAAGCATCTGCTCCACAAGGCATCATCCCTTTGCCATTGAATGCATCTGCAAACTCTCACAATGCTCCGCAACGCTCTCACAAGCCAACTCCCCTCACCATTTCTAAGCTCGCATCTGATTTGGCTTTGGCTAGCCCCGACAAACACCCACGGATGCTTGGGGATCATCTTTACCCACTTGTGGAGCAGCAGGAGCCAGCAAATGCTGCTAAAGTTACCGGGATGTTGCTGGAGATGGATCAAGCTGAGATTTTGCACCTTCTTGAGTCACCTGAAGCTCTTAAGGCTAAAGTGTCCGAGGCTCTGGATGTTCTCAGACGCTCTGCTGATCCAGCAGCTGTGTCATCTGTTGATGACCAGTTTGCTCTATCCTCATCCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0031323 GO:0031329 GO:0034641 GO:0034645 GO:0034655 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1900151 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903311

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

682

Amino Acids

74.42

Weight (kDa)

8.47

Isoelectric Point (pI)

49.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	61 - 130	1.2e-17	RNA recognition motif
RRM_1	PF00076	148 - 215	3e-20	RNA recognition motif
RRM_1	PF00076	241 - 308	3.9e-21	RNA recognition motif
RRM_1	PF00076	344 - 412	1.9e-19	RNA recognition motif
MLLE	PF00658	596 - 660	4.9e-27	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22760 AT1G71770 AT1G71770
fragaria_vesca	FvH4_2g12840
malus_domestica	MD05G1035900.v1.1 MD10G1038000.v1.1
prunus_persica	Prupe.8G043700_v2.0.a1
pyrus_communis	pycom05g02640 pycom10g02600
rosa_chinensis	RchiOBHm_Chr6g0273861
rosa_laevigata	RLG00000013594
rosa_multiflora	Rmu_ssc0000322.1_g000029
rosa_roxburghii	Rroxscaffold_7G00194960
rosa_rugosa	Rorug06G0077500
rosa_samantha	Rh6AG193000 Rh6BG196900 Rh6CG196100 Rh6DG188100
rosa_wichuraiana	Rw6G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	993
Acc65I	GGTACC	2 cut(s)	1426, 1452
AccB1I	GGYRCC	3 cut(s)	703, 1426, 1452
AccB7I	CCANNNNNTGG	1 cut(s)	1367
AccBSI	CCGCTC	1 cut(s)	596
AccII	CGCG	1 cut(s)	149
AclI	AACGTT	1 cut(s)	720
AcoI	YGGCCR	2 cut(s)	39, 655
AcsI	RAATTY	1 cut(s)	1126
AcuI	CTGAAG	5 cut(s)	348, 888, 1197, 1265, 1959
AdeI	CACNNNGTG	2 cut(s)	689, 1367
AfaI	GTAC	2 cut(s)	1428, 1454
AfiI	CCNNNNNNNGG	8 cut(s)	37, 916, 1343, 1367, 1379, 1490, 1553, 1846
AflII	CTTAAG	2 cut(s)	764, 1946
AgsI	TTSAA	4 cut(s)	890, 1039, 1526, 1705
AjnI	CCWGG	5 cut(s)	1309, 1363, 1471, 1483, 1540
Alw21I	GWGCWC	1 cut(s)	419
Alw26I	GTCTC	3 cut(s)	183, 359, 369
AlwNI	CAGNNNCTG	2 cut(s)	884, 2003
Ama87I	CYCGRG	1 cut(s)	832
AoxI	GGCC	7 cut(s)	39, 380, 655, 1370, 1405, 1492, 1543
ApoI	RAATTY	1 cut(s)	1126
Asp718I	GGTACC	2 cut(s)	1426, 1452
AspLEI	GCGC	1 cut(s)	1643
AspS9I	GGNCC	4 cut(s)	1370, 1382, 1493, 1544
AsuC2I	CCSGG	1 cut(s)	1885
AsuHPI	GGTGA	7 cut(s)	1268, 1299, 1314, 1326, 1349, 1753, 1926
AsuII	TTCGAA	1 cut(s)	554
AsuNHI	GCTAGC	1 cut(s)	1796
AvaI	CYCGRG	1 cut(s)	832
AvaII	GGWCC	1 cut(s)	1382
AxyI	CCTNAGG	1 cut(s)	741
BaeGI	GKGCMC	2 cut(s)	685, 943
BalI	TGGCCA	1 cut(s)	657
BanI	GGYRCC	3 cut(s)	703, 1426, 1452
BanII	GRGCYC	1 cut(s)	866
BauI	CACGAG	1 cut(s)	1548
BbsI	GAAGAC	1 cut(s)	776
Bbv12I	GWGCWC	1 cut(s)	419
BccI	CCATC	6 cut(s)	174, 340, 1339, 1359, 1398, 1894
BceAI	ACGGC	2 cut(s)	54, 92
BciT130I	CCWGG	5 cut(s)	1311, 1365, 1473, 1485, 1542
BclI	TGATCA	1 cut(s)	49
BcnI	CCSGG	1 cut(s)	1885
BcoDI	GTCTC	3 cut(s)	183, 359, 369
BfaI	CTAG	3 cut(s)	420, 798, 1797
BfmI	CTRYAG	2 cut(s)	876, 1610
BfrI	CTTAAG	2 cut(s)	764, 1946
BfuAI	ACCTGC	1 cut(s)	993
BglI	GCCNNNNNGGC	1 cut(s)	152
Bme1390I	CCNGG	6 cut(s)	1311, 1365, 1473, 1485, 1542, 1885
Bme18I	GGWCC	1 cut(s)	1382
BmeT110I	CYCGRG	1 cut(s)	832
BmgT120I	GGNCC	4 cut(s)	1370, 1382, 1493, 1544
BmiI	GGNNCC	5 cut(s)	705, 1349, 1428, 1454, 1860
BmrFI	CCNGG	6 cut(s)	1311, 1365, 1473, 1485, 1542, 1885
BmtI	GCTAGC	1 cut(s)	1800
BpiI	GAAGAC	1 cut(s)	776
BplI	GAGNNNNNCTC	2 cut(s)	1070, 1102
BpmI	CTGGAG	2 cut(s)	234, 1916
Bpu10I	CCTNAGC	1 cut(s)	597
Bpu14I	TTCGAA	1 cut(s)	554
BpuEI	CTTGAG	2 cut(s)	1058, 1949
BpuMI	CCSGG	1 cut(s)	1885
Bsa29I	ATCGAT	1 cut(s)	467
BsaAI	YACGTR	1 cut(s)	686
BsaBI	GATNNNNATC	1 cut(s)	198
BsaJI	CCNNGG	7 cut(s)	42, 72, 147, 910, 1472, 1814, 1962
BsaXI	ACNNNNNCTCC	2 cut(s)	908, 938
Bsc4I	CCNNNNNNNGG	8 cut(s)	37, 916, 1343, 1367, 1379, 1490, 1553, 1846
Bse1I	ACTGG	4 cut(s)	251, 574, 1325, 2023
Bse21I	CCTNAGG	1 cut(s)	741
Bse3DI	GCAATG	2 cut(s)	445, 540
Bse8I	GATNNNNATC	1 cut(s)	198
BseBI	CCWGG	5 cut(s)	1311, 1365, 1473, 1485, 1542
BseCI	ATCGAT	1 cut(s)	467
BseDI	CCNNGG	7 cut(s)	42, 72, 147, 910, 1472, 1814, 1962
BseJI	GATNNNNATC	1 cut(s)	198
BseLI	CCNNNNNNNGG	8 cut(s)	37, 916, 1343, 1367, 1379, 1490, 1553, 1846
BseMI	GCAATG	2 cut(s)	445, 540
BseMII	CTCAG	5 cut(s)	611, 1080, 1550, 1902, 1993
BseNI	ACTGG	4 cut(s)	251, 574, 1325, 2023
BseRI	GAGGAG	3 cut(s)	81, 84, 988
BseSI	GKGCMC	2 cut(s)	685, 943
BsgI	GTGCAG	1 cut(s)	1509
Bsh1236I	CGCG	1 cut(s)	149
BshFI	GGCC	7 cut(s)	41, 382, 657, 1372, 1407, 1494, 1545
BshNI	GGYRCC	3 cut(s)	703, 1426, 1452
BshVI	ATCGAT	1 cut(s)	467
BsiHKAI	GWGCWC	1 cut(s)	419
BsiHKCI	CYCGRG	1 cut(s)	832
BsiSI	CCGG	1 cut(s)	1884
BslFI	GGGAC	2 cut(s)	523, 561
BslI	CCNNNNNNNGG	8 cut(s)	37, 916, 1343, 1367, 1379, 1490, 1553, 1846
BsmAI	GTCTC	3 cut(s)	183, 359, 369
BsmBI	CGTCTC	1 cut(s)	183
BsmFI	GGGAC	2 cut(s)	523, 561
BsmI	GAATGC	1 cut(s)	1711
BsnI	GGCC	7 cut(s)	41, 382, 657, 1372, 1407, 1494, 1545
BsoBI	CYCGRG	1 cut(s)	832
Bsp119I	TTCGAA	1 cut(s)	554
Bsp1286I	GDGCHC	4 cut(s)	419, 685, 866, 943
Bsp19I	CCATGG	1 cut(s)	42
BspANI	GGCC	7 cut(s)	41, 382, 657, 1372, 1407, 1494, 1545
BspCNI	CTCAG	5 cut(s)	610, 1081, 1549, 1903, 1992
BspDI	ATCGAT	1 cut(s)	467
BspFNI	CGCG	1 cut(s)	149
BspHI	TCATGA	1 cut(s)	1506
BspLI	GGNNCC	5 cut(s)	705, 1349, 1428, 1454, 1860
BspMAI	CTGCAG	2 cut(s)	880, 1614
BspMI	ACCTGC	1 cut(s)	993
BspOI	GCTAGC	1 cut(s)	1800
BspT104I	TTCGAA	1 cut(s)	554
BspT107I	GGYRCC	3 cut(s)	703, 1426, 1452
BspTI	CTTAAG	2 cut(s)	764, 1946
BsrBI	CCGCTC	1 cut(s)	596
BsrDI	GCAATG	2 cut(s)	445, 540
BsrI	ACTGG	4 cut(s)	251, 574, 1325, 2023
BssECI	CCNNGG	7 cut(s)	42, 72, 147, 910, 1472, 1814, 1962
BssSI	CACGAG	1 cut(s)	1548
BssT1I	CCWWGG	2 cut(s)	42, 910
Bst2BI	CACGAG	1 cut(s)	1548
Bst2UI	CCWGG	5 cut(s)	1311, 1365, 1473, 1485, 1542
Bst4CI	ACNGT	3 cut(s)	76, 902, 1415
Bst6I	CTCTTC	2 cut(s)	957, 1527
BstAFI	CTTAAG	2 cut(s)	764, 1946
BstAPI	GCANNNNNTGC	1 cut(s)	1871
BstBAI	YACGTR	1 cut(s)	686
BstBI	TTCGAA	1 cut(s)	554
BstC8I	GCNNGC	7 cut(s)	1492, 1496, 1624, 1645, 1776, 1798, 1863
BstDEI	CTNAG	8 cut(s)	263, 597, 741, 1089, 1536, 1770, 1911, 1979
BstDSI	CCRYGG	4 cut(s)	42, 72, 147, 1814
BstENI	CCTNNNNNAGG	1 cut(s)	914
BstFNI	CGCG	1 cut(s)	149
BstHHI	GCGC	1 cut(s)	1643
BstMAI	GTCTC	3 cut(s)	183, 359, 369
BstNI	CCWGG	5 cut(s)	1311, 1365, 1473, 1485, 1542
BstNSI	RCATGY	1 cut(s)	1582
BstSCI	CCNGG	6 cut(s)	1309, 1363, 1471, 1483, 1540, 1883
BstSFI	CTRYAG	2 cut(s)	876, 1610
BstSLI	GKGCMC	2 cut(s)	685, 943
BstUI	CGCG	1 cut(s)	149
BstV2I	GAAGAC	1 cut(s)	776
BstX2I	RGATCY	2 cut(s)	199, 229
BstYI	RGATCY	2 cut(s)	199, 229
Bsu15I	ATCGAT	1 cut(s)	467
Bsu36I	CCTNAGG	1 cut(s)	741
BsuRI	GGCC	7 cut(s)	41, 382, 657, 1372, 1407, 1494, 1545
BsuTUI	ATCGAT	1 cut(s)	467
BtgI	CCRYGG	4 cut(s)	42, 72, 147, 1814
BtgZI	GCGATG	1 cut(s)	359
BveI	ACCTGC	1 cut(s)	993
Cac8I	GCNNGC	7 cut(s)	1492, 1496, 1624, 1645, 1776, 1798, 1863
CaiI	CAGNNNCTG	2 cut(s)	884, 2003
CciI	TCATGA	1 cut(s)	1506
CfoI	GCGC	1 cut(s)	1643
Cfr13I	GGNCC	4 cut(s)	1370, 1382, 1493, 1544
Cfr42I	CCGCGG	1 cut(s)	150
ClaI	ATCGAT	1 cut(s)	467
CseI	GACGC	2 cut(s)	1469, 1992
CsiI	ACCWGGT	1 cut(s)	1363
Csp6I	GTAC	2 cut(s)	1427, 1453
CspCI	CAANNNNNGTGG	2 cut(s)	522, 557
CviAII	CATG	6 cut(s)	43, 394, 1468, 1507, 1579, 1633
CviQI	GTAC	2 cut(s)	1427, 1453
DdeI	CTNAG	8 cut(s)	263, 597, 741, 1089, 1536, 1770, 1911, 1979
DraIII	CACNNNGTG	2 cut(s)	689, 1367
EaeI	YGGCCR	2 cut(s)	39, 655
Eam1104I	CTCTTC	2 cut(s)	957, 1527
EarI	CTCTTC	2 cut(s)	957, 1527
Eco130I	CCWWGG	2 cut(s)	42, 910
Eco147I	AGGCCT	1 cut(s)	382
Eco24I	GRGCYC	1 cut(s)	866
Eco47I	GGWCC	1 cut(s)	1382
Eco57I	CTGAAG	5 cut(s)	348, 888, 1197, 1265, 1959
Eco81I	CCTNAGG	1 cut(s)	741
Eco88I	CYCGRG	1 cut(s)	832
EcoNI	CCTNNNNNAGG	1 cut(s)	914
EcoRI	GAATTC	1 cut(s)	1126
EcoRII	CCWGG	5 cut(s)	1309, 1363, 1471, 1483, 1540
EcoT14I	CCWWGG	2 cut(s)	42, 910
EcoT22I	ATGCAT	2 cut(s)	466, 1711
EcoT38I	GRGCYC	1 cut(s)	866
ErhI	CCWWGG	2 cut(s)	42, 910
Esp3I	CGTCTC	1 cut(s)	183
FaeI	CATG	6 cut(s)	46, 397, 1471, 1510, 1582, 1636
FalI	AAGNNNNNCTT	2 cut(s)	632, 664
FaqI	GGGAC	2 cut(s)	523, 561
FatI	CATG	6 cut(s)	42, 393, 1467, 1506, 1578, 1632
FauI	CCCGC	1 cut(s)	1503
FbaI	TGATCA	1 cut(s)	49
FriOI	GRGCYC	1 cut(s)	866
FspBI	CTAG	3 cut(s)	420, 798, 1797
GlaI	GCGC	1 cut(s)	1642
GsuI	CTGGAG	2 cut(s)	234, 1916
HaeIII	GGCC	7 cut(s)	41, 382, 657, 1372, 1407, 1494, 1545
HapII	CCGG	1 cut(s)	1884
HgaI	GACGC	2 cut(s)	1469, 1992
HhaI	GCGC	1 cut(s)	1643
Hin1II	CATG	6 cut(s)	46, 397, 1471, 1510, 1582, 1636
Hin6I	GCGC	1 cut(s)	1641
HinP1I	GCGC	1 cut(s)	1641
HincII	GTYRAC	1 cut(s)	853
HindII	GTYRAC	1 cut(s)	853
HindIII	AAGCTT	3 cut(s)	480, 614, 1182
HpaII	CCGG	1 cut(s)	1884
HphI	GGTGA	7 cut(s)	1268, 1299, 1314, 1326, 1349, 1753, 1926
Hpy166II	GTNNAC	2 cut(s)	256, 853
Hpy8I	GTNNAC	2 cut(s)	256, 853
Hpy99I	CGWCG	3 cut(s)	37, 40, 672
HpyAV	CCTTC	5 cut(s)	808, 1218, 1289, 1440, 1934
HpyCH4III	ACNGT	3 cut(s)	76, 902, 1415
HpyCH4IV	ACGT	6 cut(s)	309, 550, 685, 720, 1239, 1255
HpyF3I	CTNAG	8 cut(s)	263, 597, 741, 1089, 1536, 1770, 1911, 1979
HpySE526I	ACGT	6 cut(s)	309, 550, 685, 720, 1239, 1255
Hsp92II	CATG	6 cut(s)	46, 397, 1471, 1510, 1582, 1636
HspAI	GCGC	1 cut(s)	1641
KpnI	GGTACC	2 cut(s)	1430, 1456
Ksp22I	TGATCA	1 cut(s)	49
KspI	CCGCGG	1 cut(s)	150
LmnI	GCTCC	7 cut(s)	94, 253, 370, 1681, 1735, 1849, 1858
MabI	ACCWGGT	1 cut(s)	1363
MaeI	CTAG	3 cut(s)	420, 798, 1797
MaeII	ACGT	6 cut(s)	309, 550, 685, 720, 1239, 1255
MaeIII	GTNAC	6 cut(s)	216, 299, 1102, 1320, 1879, 1932
MbiI	CCGCTC	1 cut(s)	596
MflI	RGATCY	2 cut(s)	199, 229
MhlI	GDGCHC	4 cut(s)	419, 685, 866, 943
MlsI	TGGCCA	1 cut(s)	657
MluCI	AATT	5 cut(s)	24, 313, 968, 1013, 1126
MluNI	TGGCCA	1 cut(s)	657
MlyI	GAGTC	6 cut(s)	121, 224, 277, 346, 1294, 1940
MmeI	TCCRAC	1 cut(s)	169
Mox20I	TGGCCA	1 cut(s)	657
Mph1103I	ATGCAT	2 cut(s)	466, 1711
MscI	TGGCCA	1 cut(s)	657
MseI	TTAA	7 cut(s)	237, 618, 633, 729, 765, 1139, 1947
MslI	CAYNNNNRTG	1 cut(s)	2044
Msp20I	TGGCCA	1 cut(s)	657
MspA1I	CMGCKG	2 cut(s)	149, 2003
MspCI	CTTAAG	2 cut(s)	764, 1946
MspI	CCGG	1 cut(s)	1884
MspR9I	CCNGG	6 cut(s)	1311, 1365, 1473, 1485, 1542, 1885
Mva1269I	GAATGC	1 cut(s)	1711
MvaI	CCWGG	5 cut(s)	1311, 1365, 1473, 1485, 1542
MvnI	CGCG	1 cut(s)	149
NciI	CCSGG	1 cut(s)	1885
NcoI	CCATGG	1 cut(s)	42
NheI	GCTAGC	1 cut(s)	1796
NlaIII	CATG	6 cut(s)	46, 397, 1471, 1510, 1582, 1636
NlaIV	GGNNCC	5 cut(s)	705, 1349, 1428, 1454, 1860
NmeAIII	GCCGAG	1 cut(s)	732
NmuCI	GTSAC	4 cut(s)	216, 1102, 1320, 1932
NsiI	ATGCAT	2 cut(s)	466, 1711
NspI	RCATGY	1 cut(s)	1582
NspV	TTCGAA	1 cut(s)	554
PaeR7I	CTCGAG	1 cut(s)	832
PagI	TCATGA	1 cut(s)	1506
PceI	AGGCCT	1 cut(s)	382
PctI	GAATGC	1 cut(s)	1711
PfeI	GAWTC	4 cut(s)	514, 733, 1027, 1629
PflMI	CCANNNNNTGG	1 cut(s)	1367
PleI	GAGTC	6 cut(s)	120, 223, 277, 345, 1293, 1939
PpsI	GAGTC	6 cut(s)	120, 223, 277, 345, 1293, 1939
Ppu21I	YACGTR	1 cut(s)	686
Psp1406I	AACGTT	1 cut(s)	720
Psp6I	CCWGG	5 cut(s)	1309, 1363, 1471, 1483, 1540
PspGI	CCWGG	5 cut(s)	1309, 1363, 1471, 1483, 1540
PspN4I	GGNNCC	5 cut(s)	705, 1349, 1428, 1454, 1860
PspPI	GGNCC	4 cut(s)	1370, 1382, 1493, 1544
PspXI	VCTCGAGB	1 cut(s)	832
PstI	CTGCAG	2 cut(s)	880, 1614
PstNI	CAGNNNCTG	2 cut(s)	884, 2003
PsuI	RGATCY	2 cut(s)	199, 229
PvuII	CAGCTG	1 cut(s)	2003
RsaI	GTAC	2 cut(s)	1428, 1454
RsaNI	GTAC	2 cut(s)	1427, 1453
RseI	CAYNNNNRTG	1 cut(s)	2044
SacII	CCGCGG	1 cut(s)	150
SaqAI	TTAA	7 cut(s)	237, 618, 633, 729, 765, 1139, 1947
Sau96I	GGNCC	4 cut(s)	1370, 1382, 1493, 1544
SchI	GAGTC	6 cut(s)	121, 224, 277, 346, 1294, 1940
ScrFI	CCNGG	6 cut(s)	1311, 1365, 1473, 1485, 1542, 1885
SduI	GDGCHC	4 cut(s)	419, 685, 866, 943
SexAI	ACCWGGT	1 cut(s)	1363
SfcI	CTRYAG	2 cut(s)	876, 1610
Sfr274I	CTCGAG	1 cut(s)	832
Sfr303I	CCGCGG	1 cut(s)	150
SfuI	TTCGAA	1 cut(s)	554
SgrBI	CCGCGG	1 cut(s)	150
SinI	GGWCC	1 cut(s)	1382
SlaI	CTCGAG	1 cut(s)	832
SmiMI	CAYNNNNRTG	1 cut(s)	2044
SmlI	CTYRAG	5 cut(s)	764, 832, 1073, 1928, 1946
SmoI	CTYRAG	5 cut(s)	764, 832, 1073, 1928, 1946
Sse9I	AATT	5 cut(s)	24, 313, 968, 1013, 1126
SseBI	AGGCCT	1 cut(s)	382
SspMI	CTAG	3 cut(s)	420, 798, 1797
StuI	AGGCCT	1 cut(s)	382
StyD4I	CCNGG	6 cut(s)	1309, 1363, 1471, 1483, 1540, 1883
StyI	CCWWGG	2 cut(s)	42, 910
TaaI	ACNGT	3 cut(s)	76, 902, 1415
TaiI	ACGT	6 cut(s)	312, 553, 688, 723, 1242, 1258
TaqI	TCGA	4 cut(s)	467, 554, 833, 1025
TasI	AATT	5 cut(s)	24, 313, 968, 1013, 1126
TauI	GCSGC	3 cut(s)	11, 125, 149
TfiI	GAWTC	4 cut(s)	514, 733, 1027, 1629
Tru1I	TTAA	7 cut(s)	237, 618, 633, 729, 765, 1139, 1947
Tru9I	TTAA	7 cut(s)	237, 618, 633, 729, 765, 1139, 1947
TseFI	GTSAC	4 cut(s)	216, 1102, 1320, 1932
Tsp45I	GTSAC	4 cut(s)	216, 1102, 1320, 1932
TspGWI	ACGGA	2 cut(s)	656, 1831
Van91I	CCANNNNNTGG	1 cut(s)	1367
Vha464I	CTTAAG	2 cut(s)	764, 1946
VpaK11BI	GGWCC	1 cut(s)	1382
XagI	CCTNNNNNAGG	1 cut(s)	914
XapI	RAATTY	1 cut(s)	1126
XceI	RCATGY	1 cut(s)	1582
XhoI	CTCGAG	1 cut(s)	832
XspI	CTAG	3 cut(s)	420, 798, 1797
Zsp2I	ATGCAT	2 cut(s)	466, 1711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.