Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0012291

Physical Location & Seq

Genomic Coordinates Reverse (-)

33783922 .. 33787641

Gene Structure 3720 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013594

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGGCGGCGGCGGCGGTGTCGTCTCAGGTGGCTCAACCCGTTGTTCCGGTGACGCAACAATCTCCGGTGTTGGCTCCGGCTCCGGCAGGGTACGGGAACGTGTCGCTGTACGTGGGCGATCTGGACCCGACTGTGAACGAAGCGCAACTTTACGATCTGTTCAACCAAGTGGCTCAGGTTGCTTCTCTCAGGGTTTGTAGGGATCAGACCCGAATGCACTCGCTTGGCTATGCCTATGTCAATTACGCCACTCCACAGGATGCTGCTAATGCCAAGGAGCTTTTAAATTTTGCTCCTATAAATGGGAAACCCATTAGGATCATGTACTCTCATCGCGATCCCAGCATTCGGAAGAGCGGATATGCAAATTTATTTATCAAGAACCTGGAAAAATCTATTGATAACAAGGCATTGTTGGACACTTTTTCTGCCTTTGGGACCGTACTCTCTTGCAAGGTTGCAGCTGATGCCAGTGGTCAATCTAAAGGATATGGATTCGTACAGTATGACAATGAGGAATCTGCAAAGAATGCAATCAACAAGCTGAACGGCATGCTGATAAATGAGAAACAGGTTTCTGTTGGACCTTATGTTCGACGCCAGAGGTCAAATTCATTTCAAAATATTTATGTGAAAAATTTGTCAGAGACAACTACAGATGAAGACCTTAAGGAGCTTTTTAAAGATTCTGGTAACATCACTAGTGCAGCGGTTATGAGGGATGCAAATGGAAAGTCTAGATGCTTTGGCTTTGTTAACTTCAAAAACGCTAAAGACGCTGTTGCTGCAATTGATAAGTTTAATGGGACAACTTTTAATGATAAGGTTTTGTTTGTTGGGAAGGCTCAAAAGAAGATAGAGAGGCAGGCAGAGTTAAGAGCCAAGTTTGAACAGGAAAGAATCAGCAGATTTGAGAAGCTACAAGGTGCTAATTTATATCTGAAAAATCTTGATGACACCATAAATGATGACAAGCTAAAGGAGCTATTCTCTGAATTTGGAACAATAACATCATGCAAGGTCATGCTTGATCATCAAGGAATGAGCAAGGGATCTGGATTTGTTGCCTTTTCTACCCCAGAGGAAGCTAACAAAGCTTTGAATGAAATGAATGGGAAGATGATTGGACGGAAGCCTCTATACGTTGCTGTGGCCCAGCGGAAAGAAGAGAGGAAGGCTCGATTGCAGGCACGTTTTGCCCAAATCCGAGCACCAGGTGGAATGACACCTTTGCCATCGGGAATTCCTGGATTTCATCCTGGGGCACCTAGACTCTCCCCTCAGCAGCTGTATTTTGGTCAAGGTACTCCTGGCCTTCTACCGCATCAGCCCGCAGGTTATGGCTACCAGCAGCAAATCTTGCCTGGGATGCGTCCAGGTGTTGCACCCAACTTCATTATGCCATACCACCTTCAGAGGCAAGGTCAACCTGGGCAGCGAATTGGTGTACGGCGAGGCGGCAACTTCCAACAAGTGCAGCAGCAGCAGCAGTTAATGCACCGTAACTCCAATCAAGGCTTGAGATACATGGGTAATGCTCGGAACGGAGTTGAGTCTCCTGTGTCTCCCCAAGGTCTTGTGAGTCCAATGATGCCTTTGCCCTTTGACGGTTCAGGTATGCCTGTGACATCAAGTGATATCCAGCGTTCTGGGCCAGTGCCTATGTCAACACTTGCTTCTGCTTTAGCTTCTGCTACTCCCGAGAATCAGCGTTTGATGCTGGGAGAGCAGCTATATCCACTTGTTGAGCGTATTGAGCCAGAACTCACAGCTAAGGTGACTGGGATGTTGCTGGAGATGGACCAGACAGAAGTTCTCCATCTGATCGAGTCTCCAGATGCTCTCAAGGATAAGGTAGCTGAGGCGATGGATGTCCTTCATAAAGCTACATCAAAGACTAGCCCTGATGTCACCGATCAGCTTGGTGCATTGGATCTGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0031323 GO:0031329 GO:0034641 GO:0034645 GO:0034655 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1900151 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903311

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

648

Amino Acids

70.91

Weight (kDa)

9.11

Isoelectric Point (pI)

45.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	36 - 106	3.2e-15	RNA recognition motif
RRM_1	PF00076	124 - 192	3.6e-20	RNA recognition motif
RRM_1	PF00076	209 - 277	2e-21	RNA recognition motif
RRM_1	PF00076	312 - 380	9.6e-21	RNA recognition motif
MLLE	PF00658	561 - 626	1.3e-28	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22760 AT1G71770 AT1G71770
fragaria_vesca	FvH4_2g12840
malus_domestica	MD05G1035900.v1.1 MD10G1038000.v1.1
prunus_persica	Prupe.8G043700_v2.0.a1
pyrus_communis	pycom05g02640 pycom10g02600
rosa_chinensis	RchiOBHm_Chr6g0273861
rosa_laevigata	RLG00000013594
rosa_multiflora	Rmu_ssc0000322.1_g000029
rosa_roxburghii	Rroxscaffold_7G00194960
rosa_rugosa	Rorug06G0077500
rosa_samantha	Rh6AG193000 Rh6BG196900 Rh6CG196100 Rh6DG188100
rosa_wichuraiana	Rw6G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1325
AccB1I	GGYRCC	1 cut(s)	1264
AccBSI	CCGCTC	1 cut(s)	357
AccII	CGCG	1 cut(s)	336
AclWI	GGATC	5 cut(s)	210, 326, 332, 1060, 1941
AcsI	RAATTY	6 cut(s)	286, 367, 610, 637, 995, 1242
AcuI	CTGAAG	1 cut(s)	1397
AcyI	GRCGYC	1 cut(s)	598
AdeI	CACNNNGTG	1 cut(s)	1217
AfaI	GTAC	7 cut(s)	92, 110, 326, 444, 501, 1306, 1449
AfiI	CCNNNNNNNGG	3 cut(s)	302, 348, 1607
AflII	CTTAAG	1 cut(s)	668
AflIII	ACRYGT	1 cut(s)	99
AgsI	TTSAA	5 cut(s)	163, 620, 763, 890, 1102
AhlI	ACTAGT	1 cut(s)	701
AjnI	CCWGG	8 cut(s)	384, 1213, 1246, 1258, 1309, 1363, 1375, 1429
AloI	GAACNNNNNNTCC	2 cut(s)	576, 608
Alw21I	GWGCWC	1 cut(s)	1213
Alw26I	GTCTC	5 cut(s)	27, 641, 1560, 1569, 1836
AlwI	GGATC	5 cut(s)	210, 326, 332, 1060, 1941
AlwNI	CAGNNNCTG	1 cut(s)	1288
Ama87I	CYCGRG	1 cut(s)	1700
AoxI	GGCC	3 cut(s)	1152, 1312, 1652
ApoI	RAATTY	6 cut(s)	286, 367, 610, 637, 995, 1242
ArsI	GACNNNNNNTTYG	4 cut(s)	576, 608, 719, 751
AspLEI	GCGC	1 cut(s)	145
AspS9I	GGNCC	6 cut(s)	124, 438, 584, 1153, 1652, 1801
AsuHPI	GGTGA	3 cut(s)	61, 1789, 1903
AvaI	CYCGRG	1 cut(s)	1700
AvaII	GGWCC	4 cut(s)	124, 438, 584, 1801
BaeGI	GKGCMC	1 cut(s)	1267
BaeI	ACNNNNGTAYC	2 cut(s)	1516, 1549
BanI	GGYRCC	1 cut(s)	1264
BarI	GAAGNNNNNNTAC	2 cut(s)	1124, 1156
BbsI	GAAGAC	1 cut(s)	669
Bbv12I	GWGCWC	1 cut(s)	1213
BbvCI	CCTCAGC	2 cut(s)	1281, 1860
BccI	CCATC	4 cut(s)	1243, 1792, 1827, 1861
BceAI	ACGGC	2 cut(s)	565, 1466
BciT130I	CCWGG	8 cut(s)	386, 1215, 1248, 1260, 1311, 1365, 1377, 1431
BclI	TGATCA	1 cut(s)	1030
BcoDI	GTCTC	5 cut(s)	27, 641, 1560, 1569, 1836
BcuI	ACTAGT	1 cut(s)	701
BfaI	CTAG	4 cut(s)	702, 738, 1269, 1899
BfmI	CTRYAG	1 cut(s)	654
BfrI	CTTAAG	1 cut(s)	668
BfuAI	ACCTGC	1 cut(s)	1325
Bme1390I	CCNGG	8 cut(s)	386, 1215, 1248, 1260, 1311, 1365, 1377, 1431
Bme18I	GGWCC	4 cut(s)	124, 438, 584, 1801
BmeT110I	CYCGRG	1 cut(s)	1700
BmgT120I	GGNCC	6 cut(s)	124, 438, 584, 1153, 1652, 1801
BmiI	GGNNCC	5 cut(s)	75, 81, 126, 439, 1266
BmrFI	CCNGG	8 cut(s)	386, 1215, 1248, 1260, 1311, 1365, 1377, 1431
BmrI	ACTGGG	1 cut(s)	1791
BmsI	GCATC	9 cut(s)	250, 457, 712, 731, 1333, 1359, 1581, 1707, 1828
BmuI	ACTGGG	1 cut(s)	1791
BpiI	GAAGAC	1 cut(s)	669
BplI	GAGNNNNNCTC	4 cut(s)	974, 1006, 1162, 1194
BpmI	CTGGAG	2 cut(s)	1814, 1818
Bpu10I	CCTNAGC	4 cut(s)	174, 1281, 1773, 1860
BpuEI	CTTGAG	2 cut(s)	1540, 1829
BsaAI	YACGTR	1 cut(s)	112
BsaHI	GRCGYC	1 cut(s)	598
BsaJI	CCNNGG	5 cut(s)	273, 1259, 1364, 1430, 1570
BsaWI	WCCGGW	2 cut(s)	46, 64
BsaXI	ACNNNNNCTCC	2 cut(s)	1490, 1520
Bsc4I	CCNNNNNNNGG	3 cut(s)	302, 348, 1607
Bse1I	ACTGG	3 cut(s)	471, 1655, 1786
BseBI	CCWGG	8 cut(s)	386, 1215, 1248, 1260, 1311, 1365, 1377, 1431
BseDI	CCNNGG	5 cut(s)	273, 1259, 1364, 1430, 1570
BseGI	GGATG	6 cut(s)	265, 727, 1255, 1374, 1791, 1876
BseLI	CCNNNNNNNGG	3 cut(s)	302, 348, 1607
BseMII	CTCAG	5 cut(s)	38, 188, 202, 1295, 1851
BseNI	ACTGG	3 cut(s)	471, 1655, 1786
BseSI	GKGCMC	1 cut(s)	1267
BseYI	CCCAGC	3 cut(s)	341, 1155, 1720
BsgI	GTGCAG	2 cut(s)	726, 1496
Bsh1236I	CGCG	1 cut(s)	336
BshFI	GGCC	3 cut(s)	1154, 1314, 1654
BshNI	GGYRCC	1 cut(s)	1264
BsiHKAI	GWGCWC	1 cut(s)	1213
BsiHKCI	CYCGRG	1 cut(s)	1700
BsiSI	CCGG	4 cut(s)	47, 65, 77, 83
BslFI	GGGAC	2 cut(s)	451, 820
BslI	CCNNNNNNNGG	3 cut(s)	302, 348, 1607
BsmAI	GTCTC	5 cut(s)	27, 641, 1560, 1569, 1836
BsmBI	CGTCTC	1 cut(s)	27
BsmFI	GGGAC	2 cut(s)	451, 820
BsmI	GAATGC	3 cut(s)	219, 345, 535
BsnI	GGCC	3 cut(s)	1154, 1314, 1654
BsoBI	CYCGRG	1 cut(s)	1700
Bsp1286I	GDGCHC	2 cut(s)	1213, 1267
Bsp68I	TCGCGA	1 cut(s)	336
BspANI	GGCC	3 cut(s)	1154, 1314, 1654
BspCNI	CTCAG	5 cut(s)	37, 187, 201, 1294, 1852
BspFNI	CGCG	1 cut(s)	336
BspLI	GGNNCC	5 cut(s)	75, 81, 126, 439, 1266
BspMI	ACCTGC	1 cut(s)	1325
BspPI	GGATC	5 cut(s)	210, 326, 332, 1060, 1941
BspQI	GCTCTTC	1 cut(s)	347
BspT107I	GGYRCC	1 cut(s)	1264
BspTI	CTTAAG	1 cut(s)	668
BsrBI	CCGCTC	1 cut(s)	357
BsrI	ACTGG	3 cut(s)	471, 1655, 1786
BssECI	CCNNGG	5 cut(s)	273, 1259, 1364, 1430, 1570
BssNI	GRCGYC	1 cut(s)	598
BssT1I	CCWWGG	2 cut(s)	273, 1570
Bst2UI	CCWGG	8 cut(s)	386, 1215, 1248, 1260, 1311, 1365, 1377, 1431
Bst4CI	ACNGT	5 cut(s)	133, 442, 504, 1502, 1610
Bst6I	CTCTTC	2 cut(s)	347, 1161
BstACI	GRCGYC	1 cut(s)	598
BstAFI	CTTAAG	1 cut(s)	668
BstAPI	GCANNNNNTGC	5 cut(s)	467, 530, 1196, 1360, 1495
BstBAI	YACGTR	1 cut(s)	112
BstC8I	GCNNGC	4 cut(s)	554, 867, 1188, 1332
BstDEI	CTNAG	6 cut(s)	24, 174, 188, 1281, 1773, 1860
BstF5I	GGATG	6 cut(s)	265, 727, 1255, 1374, 1791, 1876
BstFNI	CGCG	1 cut(s)	336
BstHHI	GCGC	1 cut(s)	145
BstMAI	GTCTC	5 cut(s)	27, 641, 1560, 1569, 1836
BstNI	CCWGG	8 cut(s)	386, 1215, 1248, 1260, 1311, 1365, 1377, 1431
BstNSI	RCATGY	1 cut(s)	556
BstSCI	CCNGG	8 cut(s)	384, 1213, 1246, 1258, 1309, 1363, 1375, 1429
BstSFI	CTRYAG	1 cut(s)	654
BstSLI	GKGCMC	1 cut(s)	1267
BstUI	CGCG	1 cut(s)	336
BstV2I	GAAGAC	1 cut(s)	669
BstX2I	RGATCY	2 cut(s)	1052, 1933
BstXI	CCANNNNNNTGG	1 cut(s)	1649
BstYI	RGATCY	2 cut(s)	1052, 1933
BsuRI	GGCC	3 cut(s)	1154, 1314, 1654
BtgZI	GCGATG	2 cut(s)	317, 1880
BtsCI	GGATG	6 cut(s)	265, 727, 1255, 1374, 1791, 1876
BtsIMutI	CAGTG	2 cut(s)	478, 1662
BtuMI	TCGCGA	1 cut(s)	336
BveI	ACCTGC	1 cut(s)	1325
Cac8I	GCNNGC	4 cut(s)	554, 867, 1188, 1332
CaiI	CAGNNNCTG	1 cut(s)	1288
CfoI	GCGC	1 cut(s)	145
Cfr13I	GGNCC	6 cut(s)	124, 438, 584, 1153, 1652, 1801
CseI	GACGC	4 cut(s)	61, 606, 785, 1361
CsiI	ACCWGGT	1 cut(s)	1213
Csp6I	GTAC	7 cut(s)	91, 109, 325, 443, 500, 1305, 1448
CviAII	CATG	5 cut(s)	322, 553, 1014, 1024, 1528
CviQI	GTAC	7 cut(s)	91, 109, 325, 443, 500, 1305, 1448
DdeI	CTNAG	6 cut(s)	24, 174, 188, 1281, 1773, 1860
DraI	TTTAAA	2 cut(s)	285, 682
DraIII	CACNNNGTG	1 cut(s)	1217
Eam1104I	CTCTTC	2 cut(s)	347, 1161
EarI	CTCTTC	2 cut(s)	347, 1161
Eco130I	CCWWGG	2 cut(s)	273, 1570
Eco32I	GATATC	1 cut(s)	1639
Eco47I	GGWCC	4 cut(s)	124, 438, 584, 1801
Eco57I	CTGAAG	1 cut(s)	1397
Eco88I	CYCGRG	1 cut(s)	1700
EcoRI	GAATTC	1 cut(s)	1242
EcoRII	CCWGG	8 cut(s)	384, 1213, 1246, 1258, 1309, 1363, 1375, 1429
EcoRV	GATATC	1 cut(s)	1639
EcoT14I	CCWWGG	2 cut(s)	273, 1570
ErhI	CCWWGG	2 cut(s)	273, 1570
Esp3I	CGTCTC	1 cut(s)	27
FaeI	CATG	5 cut(s)	325, 556, 1017, 1027, 1531
FalI	AAGNNNNNCTT	2 cut(s)	132, 164
FaqI	GGGAC	2 cut(s)	451, 820
FatI	CATG	5 cut(s)	321, 552, 1013, 1023, 1527
FauI	CCCGC	1 cut(s)	1339
FbaI	TGATCA	1 cut(s)	1030
FokI	GGATG	6 cut(s)	272, 734, 1242, 1381, 1798, 1883
FspBI	CTAG	4 cut(s)	702, 738, 1269, 1899
GlaI	GCGC	1 cut(s)	144
GsaI	CCCAGC	3 cut(s)	345, 1159, 1724
GsuI	CTGGAG	2 cut(s)	1814, 1818
HaeIII	GGCC	3 cut(s)	1154, 1314, 1654
HapII	CCGG	4 cut(s)	47, 65, 77, 83
HgaI	GACGC	4 cut(s)	61, 606, 785, 1361
HhaI	GCGC	1 cut(s)	145
Hin1I	GRCGYC	1 cut(s)	598
Hin1II	CATG	5 cut(s)	325, 556, 1017, 1027, 1531
Hin6I	GCGC	1 cut(s)	143
HinP1I	GCGC	1 cut(s)	143
HincII	GTYRAC	3 cut(s)	757, 1427, 1668
HindII	GTYRAC	3 cut(s)	757, 1427, 1668
HindIII	AAGCTT	1 cut(s)	1095
HinfI	GANTC	9 cut(s)	495, 518, 686, 900, 1272, 1553, 1582, 1705, 1829
HpaI	GTTAAC	1 cut(s)	757
HpaII	CCGG	4 cut(s)	47, 65, 77, 83
HphI	GGTGA	3 cut(s)	61, 1789, 1903
Hpy166II	GTNNAC	5 cut(s)	136, 757, 1427, 1448, 1668
Hpy188III	TCNNGA	9 cut(s)	122, 335, 379, 738, 950, 1056, 1239, 1700, 1835
Hpy8I	GTNNAC	5 cut(s)	136, 757, 1427, 1448, 1668
Hpy99I	CGWCG	1 cut(s)	600
HpyAV	CCTTC	5 cut(s)	835, 1168, 1325, 1421, 1886
HpyCH4III	ACNGT	5 cut(s)	133, 442, 504, 1502, 1610
HpyCH4IV	ACGT	4 cut(s)	99, 111, 1143, 1192
HpyF3I	CTNAG	6 cut(s)	24, 174, 188, 1281, 1773, 1860
HpySE526I	ACGT	4 cut(s)	99, 111, 1143, 1192
Hsp92I	GRCGYC	1 cut(s)	598
Hsp92II	CATG	5 cut(s)	325, 556, 1017, 1027, 1531
HspAI	GCGC	1 cut(s)	143
Ksp22I	TGATCA	1 cut(s)	1030
KspAI	GTTAAC	1 cut(s)	757
LguI	GCTCTTC	1 cut(s)	347
LmnI	GCTCC	6 cut(s)	79, 85, 277, 298, 673, 982
LweI	GCATC	9 cut(s)	250, 457, 712, 731, 1333, 1359, 1581, 1707, 1828
MabI	ACCWGGT	1 cut(s)	1213
MaeI	CTAG	4 cut(s)	702, 738, 1269, 1899
MaeII	ACGT	4 cut(s)	99, 111, 1143, 1192
MaeIII	GTNAC	6 cut(s)	49, 692, 1502, 1624, 1777, 1909
MbiI	CCGCTC	1 cut(s)	357
MboII	GAAGA	5 cut(s)	364, 674, 865, 1129, 1178
MfeI	CAATTG	1 cut(s)	789
MflI	RGATCY	2 cut(s)	1052, 1933
MhlI	GDGCHC	2 cut(s)	1213, 1267
MlyI	GAGTC	4 cut(s)	1266, 1562, 1591, 1838
MmeI	TCCRAC	3 cut(s)	396, 562, 1492
MseI	TTAA	8 cut(s)	284, 669, 681, 756, 801, 816, 875, 1493
MspA1I	CMGCKG	4 cut(s)	464, 710, 1159, 1288
MspCI	CTTAAG	1 cut(s)	668
MspI	CCGG	4 cut(s)	47, 65, 77, 83
MspR9I	CCNGG	8 cut(s)	386, 1215, 1248, 1260, 1311, 1365, 1377, 1431
MunI	CAATTG	1 cut(s)	789
Mva1269I	GAATGC	3 cut(s)	219, 345, 535
MvaI	CCWGG	8 cut(s)	386, 1215, 1248, 1260, 1311, 1365, 1377, 1431
MvnI	CGCG	1 cut(s)	336
NlaIII	CATG	5 cut(s)	325, 556, 1017, 1027, 1531
NlaIV	GGNNCC	5 cut(s)	75, 81, 126, 439, 1266
NmuCI	GTSAC	4 cut(s)	49, 1624, 1777, 1909
NruI	TCGCGA	1 cut(s)	336
NspI	RCATGY	1 cut(s)	556
PaeI	GCATGC	1 cut(s)	556
PciSI	GCTCTTC	1 cut(s)	347
PctI	GAATGC	3 cut(s)	219, 345, 535
PfeI	GAWTC	5 cut(s)	495, 518, 686, 900, 1705
PfoI	TCCNGGA	1 cut(s)	1246
PleI	GAGTC	4 cut(s)	1266, 1561, 1590, 1837
PpsI	GAGTC	4 cut(s)	1266, 1561, 1590, 1837
Ppu21I	YACGTR	1 cut(s)	112
Psp6I	CCWGG	8 cut(s)	384, 1213, 1246, 1258, 1309, 1363, 1375, 1429
PspFI	CCCAGC	3 cut(s)	341, 1155, 1720
PspGI	CCWGG	8 cut(s)	384, 1213, 1246, 1258, 1309, 1363, 1375, 1429
PspN4I	GGNNCC	5 cut(s)	75, 81, 126, 439, 1266
PspPI	GGNCC	6 cut(s)	124, 438, 584, 1153, 1652, 1801
PstNI	CAGNNNCTG	1 cut(s)	1288
PsuI	RGATCY	2 cut(s)	1052, 1933
PvuII	CAGCTG	2 cut(s)	464, 1288
RruI	TCGCGA	1 cut(s)	336
RsaI	GTAC	7 cut(s)	92, 110, 326, 444, 501, 1306, 1449
RsaNI	GTAC	7 cut(s)	91, 109, 325, 443, 500, 1305, 1448
SapI	GCTCTTC	1 cut(s)	347
SaqAI	TTAA	8 cut(s)	284, 669, 681, 756, 801, 816, 875, 1493
Sau96I	GGNCC	6 cut(s)	124, 438, 584, 1153, 1652, 1801
SchI	GAGTC	4 cut(s)	1266, 1562, 1591, 1838
ScrFI	CCNGG	8 cut(s)	386, 1215, 1248, 1260, 1311, 1365, 1377, 1431
SduI	GDGCHC	2 cut(s)	1213, 1267
SexAI	ACCWGGT	1 cut(s)	1213
SfaNI	GCATC	9 cut(s)	250, 457, 712, 731, 1333, 1359, 1581, 1707, 1828
SfcI	CTRYAG	1 cut(s)	654
SinI	GGWCC	4 cut(s)	124, 438, 584, 1801
SmlI	CTYRAG	3 cut(s)	668, 1519, 1844
SmoI	CTYRAG	3 cut(s)	668, 1519, 1844
SpeI	ACTAGT	1 cut(s)	701
SphI	GCATGC	1 cut(s)	556
SspI	AATATT	1 cut(s)	625
SspMI	CTAG	4 cut(s)	702, 738, 1269, 1899
StyD4I	CCNGG	8 cut(s)	384, 1213, 1246, 1258, 1309, 1363, 1375, 1429
StyI	CCWWGG	2 cut(s)	273, 1570
TaaI	ACNGT	5 cut(s)	133, 442, 504, 1502, 1610
TaiI	ACGT	4 cut(s)	102, 114, 1146, 1195
TaqI	TCGA	3 cut(s)	595, 1180, 1827
TatI	WGTACW	1 cut(s)	324
TauI	GCSGC	4 cut(s)	8, 11, 14, 1461
TfiI	GAWTC	5 cut(s)	495, 518, 686, 900, 1705
Tru1I	TTAA	8 cut(s)	284, 669, 681, 756, 801, 816, 875, 1493
Tru9I	TTAA	8 cut(s)	284, 669, 681, 756, 801, 816, 875, 1493
TscAI	CASTG	2 cut(s)	478, 1662
TseFI	GTSAC	4 cut(s)	49, 1624, 1777, 1909
Tsp45I	GTSAC	4 cut(s)	49, 1624, 1777, 1909
TspDTI	ATGAA	7 cut(s)	603, 675, 1119, 1124, 1244, 1384, 1868
TspGWI	ACGGA	2 cut(s)	1144, 1560
TspRI	CASTG	2 cut(s)	478, 1662
Vha464I	CTTAAG	1 cut(s)	668
VpaK11BI	GGWCC	4 cut(s)	124, 438, 584, 1801
XapI	RAATTY	6 cut(s)	286, 367, 610, 637, 995, 1242
XbaI	TCTAGA	1 cut(s)	737
XceI	RCATGY	1 cut(s)	556
XspI	CTAG	4 cut(s)	702, 738, 1269, 1899

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.