Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0012291

Physical Location & Seq

Genomic Coordinates Forward (+)

33173600 .. 33177125

Gene Structure 3526 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G016820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGGCGGCGGCGGTGGTGTCCTCTCAGGTGGCTCAACCCGTTGTTCCGGTGACTCAACAATCTCCGGTGTCGGCTCCGGCTCCGGCTCCGGCGGGGTTCGGGAACGTGTCGCTGTACGTGGGCGATCTGGACCCGACTGTGAACGAAGCGCAACTTTACGATCTGTTCAACCAAGTGGCTCAGGTTGCTTCCCTCCGGGTTTGTAGGGATCAGACCCGAATGCACTCGCTTGGCTATGCCTATGTCAATTACGCCACTCCACAGGATGCTGCTAATGCCAAGGAGCTTTTAAATTTTGCTCCTATAAATGGGAAACCCATTAGGATCATGTACTCTCATCGCGATCCCAGCATTCGGAAGAGCGGATATGCAAATTTATTTATTAAGAACCTGGAAAAATCTATTGATAACAAGGCATTGTTGGACACTTTTTCTGCCTTTGGGACCGTACTCTCTTGCAAGGTTGCAGCTGATGCCAGTGGTCAATCAAAAGGATATGGTTTCGTACAGTATGACAATGAGGAATCTGCAAATAATGCAATCAACAAGCTGAATGGCATGCTGATAAATGAGAAACAGGTTTCCGTTGGACCTTATGTTCGACGCCAGAGGTCAAATTCATTTCGAAATATTTATGTGAAAAATTTGTCAGAGACAACTACAGATGAAGACCTTAAGAAGCTTTTTGGAAAATCTGGTAACATCACTAGTGCTGCGGTTATGAGGGATGCAAATGGAAAGTCTAGATGCTTTGGCTTTGTTAACTTCGAAAACGCTAAAGACGCTGTTGCTGCAATTGATGAGTTTAATGGGACAACTTTTAATGATAAGGTTTTGTTTGTTGGGAAGGCTCAAAAGAAGATAGAGAGGCAGGCAGAGTTAAGAGCGAAGTTTGAACAGGAAAGAATCAGCAGATTTGAGAAGCTACAAGGTGCTAATTTATATCTGAAAAATCTTGATGACACCATAAATGATGACAAACTAAAGGAGCTATTCTCTGAATTTGGAACAATAACATCATGCAAGGTCATGCTTGATCATCAAGGAATGAGCAAGGGATCTGGATTTGTTGCCTTTTCTACCCCAGAGGAAGCTAACAAAGCTTTGAATGAAATGAATGGGAAGATGATTGGACGGAAGCCTCTATACGTTGCTGTGGCCCAGCGGAAAGAAGAGAGGAAGGCTCGATTACAGGCACGTTTTGCCCAAATCCGAGCACCAAGTGGAATGACACCTTTGCCATCGGGAATTCCTGGATTTCATCCTGGGGCACCTAGACTCTCCCCTCAGCAGCTGTATTTTGGTCAAGGTACTCCTGGCCTTCTACCGCATCAGCCTGCAGGTTATGGCTTCCAGCAGCAAATCTTGCCTGGGATGCGTCCAGGTGTTGCTCCCAACTTCATTATGCCATATCACCTTCAGAGGCAAGGTCAACCTGGGCAGCGATTTGGTGTACGGCGAGGCGGCAACTTCCAACAAGTGCAGCAGCAGCCGCAGTTAATGCACCGTAACTCCAATCAAGGCTTGAGATACATGGGTAATGCTCGGAACGGAGTTGAGTCTCCTGTGTCTCCCCAAGGTCTTGTCAGTCCAATGATGCCTTTGCCCTTTGACGGTTCAGGTATGCCTGTGACATCTAGTGATATCCAGCGTTCTGGGCCAGTGCCTATGTCAACACTTGCTTCTGCTTTAGCTTCTGCTACTCCCGAGAATCAGCGTTTGATGCTGGGAGAGCAGCTATATCCACTTGTTGAGCGTATTGAGCCAGAACTCACAGCTAAGGTGACTGGGATGTTGCTGGAGATGGACCAGACAGAAGTTCTCCATCTGATCGAGTCTCCAGATGCTCTCAAGGATAAGGTAGCTGAGGCGATGGATGTCCTTCATAAAGCTACATCAAAGACTGATGTCACCGATCAGCTTGGTGCATTGGATCTGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0031323 GO:0031329 GO:0034641 GO:0034645 GO:0034655 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1900151 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903311

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

647

Amino Acids

70.85

Weight (kDa)

9.07

Isoelectric Point (pI)

46.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	38 - 108	3.2e-15	RNA recognition motif
RRM_1	PF00076	126 - 194	4.7e-20	RNA recognition motif
RRM_1	PF00076	211 - 279	9.1e-22	RNA recognition motif
RRM_1	PF00076	314 - 382	9.6e-21	RNA recognition motif
MLLE	PF00658	563 - 628	1.3e-28	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22760 AT1G71770 AT1G71770
fragaria_vesca	FvH4_2g12840
malus_domestica	MD05G1035900.v1.1 MD10G1038000.v1.1
prunus_persica	Prupe.8G043700_v2.0.a1
pyrus_communis	pycom05g02640 pycom10g02600
rosa_chinensis	RchiOBHm_Chr6g0273861
rosa_laevigata	RLG00000013594
rosa_multiflora	Rmu_ssc0000322.1_g000029
rosa_roxburghii	Rroxscaffold_7G00194960
rosa_rugosa	Rorug06G0077500
rosa_samantha	Rh6AG193000 Rh6BG196900 Rh6CG196100 Rh6DG188100
rosa_wichuraiana	Rw6G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1331
AccB1I	GGYRCC	1 cut(s)	1270
AccBSI	CCGCTC	1 cut(s)	363
AccII	CGCG	1 cut(s)	342
AclWI	GGATC	5 cut(s)	216, 332, 338, 1066, 1941
AcsI	RAATTY	6 cut(s)	292, 373, 616, 643, 1001, 1248
AcuI	CTGAAG	1 cut(s)	1403
AcyI	GRCGYC	1 cut(s)	604
AdeI	CACNNNGTG	1 cut(s)	1223
AfaI	GTAC	6 cut(s)	116, 332, 450, 507, 1312, 1455
AfiI	CCNNNNNNNGG	3 cut(s)	308, 354, 1613
AflII	CTTAAG	1 cut(s)	674
AflIII	ACRYGT	1 cut(s)	105
AgsI	TTSAA	3 cut(s)	169, 896, 1108
AhlI	ACTAGT	1 cut(s)	707
AjnI	CCWGG	7 cut(s)	390, 1252, 1264, 1315, 1369, 1381, 1435
AloI	GAACNNNNNNTCC	2 cut(s)	582, 614
Alw21I	GWGCWC	1 cut(s)	1219
Alw26I	GTCTC	4 cut(s)	647, 1566, 1575, 1842
AlwI	GGATC	5 cut(s)	216, 332, 338, 1066, 1941
AlwNI	CAGNNNCTG	1 cut(s)	1294
Ama87I	CYCGRG	1 cut(s)	1706
AoxI	GGCC	3 cut(s)	1158, 1318, 1658
ApoI	RAATTY	6 cut(s)	292, 373, 616, 643, 1001, 1248
ArsI	GACNNNNNNTTYG	4 cut(s)	582, 614, 725, 757
AspLEI	GCGC	1 cut(s)	151
AspS9I	GGNCC	6 cut(s)	130, 444, 590, 1159, 1658, 1807
AsuC2I	CCSGG	1 cut(s)	197
AsuHPI	GGTGA	4 cut(s)	61, 1406, 1795, 1903
AsuII	TTCGAA	2 cut(s)	625, 768
AvaI	CYCGRG	1 cut(s)	1706
AvaII	GGWCC	4 cut(s)	130, 444, 590, 1807
BaeGI	GKGCMC	1 cut(s)	1273
BaeI	ACNNNNGTAYC	2 cut(s)	1522, 1555
BanI	GGYRCC	1 cut(s)	1270
BarI	GAAGNNNNNNTAC	2 cut(s)	1130, 1162
BbsI	GAAGAC	1 cut(s)	675
Bbv12I	GWGCWC	1 cut(s)	1219
BbvCI	CCTCAGC	2 cut(s)	1287, 1866
BccI	CCATC	4 cut(s)	1249, 1798, 1833, 1867
BceAI	ACGGC	1 cut(s)	1472
BciT130I	CCWGG	7 cut(s)	392, 1254, 1266, 1317, 1371, 1383, 1437
BclI	TGATCA	1 cut(s)	1036
BcnI	CCSGG	1 cut(s)	197
BcoDI	GTCTC	4 cut(s)	647, 1566, 1575, 1842
BcuI	ACTAGT	1 cut(s)	707
BfaI	CTAG	4 cut(s)	708, 744, 1275, 1638
BfmI	CTRYAG	2 cut(s)	660, 1338
BfrI	CTTAAG	1 cut(s)	674
BfuAI	ACCTGC	1 cut(s)	1331
Bme1390I	CCNGG	8 cut(s)	197, 392, 1254, 1266, 1317, 1371, 1383, 1437
Bme18I	GGWCC	4 cut(s)	130, 444, 590, 1807
BmeT110I	CYCGRG	1 cut(s)	1706
BmgT120I	GGNCC	6 cut(s)	130, 444, 590, 1159, 1658, 1807
BmiI	GGNNCC	6 cut(s)	75, 81, 87, 132, 445, 1272
BmrFI	CCNGG	8 cut(s)	197, 392, 1254, 1266, 1317, 1371, 1383, 1437
BmrI	ACTGGG	1 cut(s)	1797
BmsI	GCATC	9 cut(s)	256, 463, 718, 737, 1339, 1365, 1587, 1713, 1834
BmuI	ACTGGG	1 cut(s)	1797
BoxI	GACNNNNGTC	1 cut(s)	1907
BpiI	GAAGAC	1 cut(s)	675
BplI	GAGNNNNNCTC	4 cut(s)	980, 1012, 1168, 1200
BpmI	CTGGAG	2 cut(s)	1820, 1824
Bpu10I	CCTNAGC	4 cut(s)	180, 1287, 1779, 1866
Bpu14I	TTCGAA	2 cut(s)	625, 768
BpuEI	CTTGAG	2 cut(s)	1546, 1835
BpuMI	CCSGG	1 cut(s)	197
BsaAI	YACGTR	1 cut(s)	118
BsaHI	GRCGYC	1 cut(s)	604
BsaJI	CCNNGG	5 cut(s)	279, 1265, 1370, 1436, 1576
BsaWI	WCCGGW	2 cut(s)	46, 64
BsaXI	ACNNNNNCTCC	2 cut(s)	1496, 1526
Bsc4I	CCNNNNNNNGG	3 cut(s)	308, 354, 1613
Bse1I	ACTGG	3 cut(s)	477, 1661, 1792
BseBI	CCWGG	7 cut(s)	392, 1254, 1266, 1317, 1371, 1383, 1437
BseDI	CCNNGG	5 cut(s)	279, 1265, 1370, 1436, 1576
BseGI	GGATG	6 cut(s)	271, 733, 1261, 1380, 1797, 1882
BseLI	CCNNNNNNNGG	3 cut(s)	308, 354, 1613
BseMII	CTCAG	4 cut(s)	38, 194, 1301, 1857
BseNI	ACTGG	3 cut(s)	477, 1661, 1792
BseSI	GKGCMC	1 cut(s)	1273
BseYI	CCCAGC	3 cut(s)	347, 1161, 1726
BsgI	GTGCAG	1 cut(s)	1502
Bsh1236I	CGCG	1 cut(s)	342
BshFI	GGCC	3 cut(s)	1160, 1320, 1660
BshNI	GGYRCC	1 cut(s)	1270
BsiHKAI	GWGCWC	1 cut(s)	1219
BsiHKCI	CYCGRG	1 cut(s)	1706
BsiSI	CCGG	6 cut(s)	47, 65, 77, 83, 89, 196
BslFI	GGGAC	2 cut(s)	457, 826
BslI	CCNNNNNNNGG	3 cut(s)	308, 354, 1613
BsmAI	GTCTC	4 cut(s)	647, 1566, 1575, 1842
BsmFI	GGGAC	2 cut(s)	457, 826
BsmI	GAATGC	2 cut(s)	225, 351
BsnI	GGCC	3 cut(s)	1160, 1320, 1660
BsoBI	CYCGRG	1 cut(s)	1706
Bsp119I	TTCGAA	2 cut(s)	625, 768
Bsp1286I	GDGCHC	2 cut(s)	1219, 1273
Bsp68I	TCGCGA	1 cut(s)	342
BspANI	GGCC	3 cut(s)	1160, 1320, 1660
BspCNI	CTCAG	4 cut(s)	37, 193, 1300, 1858
BspFNI	CGCG	1 cut(s)	342
BspLI	GGNNCC	6 cut(s)	75, 81, 87, 132, 445, 1272
BspMAI	CTGCAG	1 cut(s)	1342
BspMI	ACCTGC	1 cut(s)	1331
BspPI	GGATC	5 cut(s)	216, 332, 338, 1066, 1941
BspQI	GCTCTTC	1 cut(s)	353
BspT104I	TTCGAA	2 cut(s)	625, 768
BspT107I	GGYRCC	1 cut(s)	1270
BspTI	CTTAAG	1 cut(s)	674
BsrBI	CCGCTC	1 cut(s)	363
BsrI	ACTGG	3 cut(s)	477, 1661, 1792
BssECI	CCNNGG	5 cut(s)	279, 1265, 1370, 1436, 1576
BssNI	GRCGYC	1 cut(s)	604
BssT1I	CCWWGG	2 cut(s)	279, 1576
Bst2UI	CCWGG	7 cut(s)	392, 1254, 1266, 1317, 1371, 1383, 1437
Bst4CI	ACNGT	5 cut(s)	139, 448, 510, 1508, 1616
Bst6I	CTCTTC	2 cut(s)	353, 1167
BstACI	GRCGYC	1 cut(s)	604
BstAFI	CTTAAG	1 cut(s)	674
BstAPI	GCANNNNNTGC	5 cut(s)	473, 536, 1202, 1366, 1501
BstBAI	YACGTR	1 cut(s)	118
BstBI	TTCGAA	2 cut(s)	625, 768
BstC8I	GCNNGC	3 cut(s)	560, 873, 1338
BstDEI	CTNAG	5 cut(s)	24, 180, 1287, 1779, 1866
BstF5I	GGATG	6 cut(s)	271, 733, 1261, 1380, 1797, 1882
BstFNI	CGCG	1 cut(s)	342
BstHHI	GCGC	1 cut(s)	151
BstMAI	GTCTC	4 cut(s)	647, 1566, 1575, 1842
BstNI	CCWGG	7 cut(s)	392, 1254, 1266, 1317, 1371, 1383, 1437
BstNSI	RCATGY	1 cut(s)	562
BstPAI	GACNNNNGTC	1 cut(s)	1907
BstSCI	CCNGG	8 cut(s)	195, 390, 1252, 1264, 1315, 1369, 1381, 1435
BstSFI	CTRYAG	2 cut(s)	660, 1338
BstSLI	GKGCMC	1 cut(s)	1273
BstUI	CGCG	1 cut(s)	342
BstV2I	GAAGAC	1 cut(s)	675
BstX2I	RGATCY	2 cut(s)	1058, 1933
BstXI	CCANNNNNNTGG	1 cut(s)	1655
BstYI	RGATCY	2 cut(s)	1058, 1933
BsuRI	GGCC	3 cut(s)	1160, 1320, 1660
BtgZI	GCGATG	2 cut(s)	323, 1886
BtsCI	GGATG	6 cut(s)	271, 733, 1261, 1380, 1797, 1882
BtsIMutI	CAGTG	2 cut(s)	484, 1668
BtuMI	TCGCGA	1 cut(s)	342
BveI	ACCTGC	1 cut(s)	1331
Cac8I	GCNNGC	3 cut(s)	560, 873, 1338
CaiI	CAGNNNCTG	1 cut(s)	1294
CfoI	GCGC	1 cut(s)	151
Cfr13I	GGNCC	6 cut(s)	130, 444, 590, 1159, 1658, 1807
CseI	GACGC	3 cut(s)	612, 791, 1367
Csp6I	GTAC	6 cut(s)	115, 331, 449, 506, 1311, 1454
CviAII	CATG	5 cut(s)	328, 559, 1020, 1030, 1534
CviQI	GTAC	6 cut(s)	115, 331, 449, 506, 1311, 1454
DdeI	CTNAG	5 cut(s)	24, 180, 1287, 1779, 1866
DraI	TTTAAA	1 cut(s)	291
DraIII	CACNNNGTG	1 cut(s)	1223
Eam1104I	CTCTTC	2 cut(s)	353, 1167
EarI	CTCTTC	2 cut(s)	353, 1167
Eco130I	CCWWGG	2 cut(s)	279, 1576
Eco32I	GATATC	1 cut(s)	1645
Eco47I	GGWCC	4 cut(s)	130, 444, 590, 1807
Eco57I	CTGAAG	1 cut(s)	1403
Eco88I	CYCGRG	1 cut(s)	1706
EcoRI	GAATTC	1 cut(s)	1248
EcoRII	CCWGG	7 cut(s)	390, 1252, 1264, 1315, 1369, 1381, 1435
EcoRV	GATATC	1 cut(s)	1645
EcoT14I	CCWWGG	2 cut(s)	279, 1576
ErhI	CCWWGG	2 cut(s)	279, 1576
FaeI	CATG	5 cut(s)	331, 562, 1023, 1033, 1537
FalI	AAGNNNNNCTT	2 cut(s)	138, 170
FaqI	GGGAC	2 cut(s)	457, 826
FatI	CATG	5 cut(s)	327, 558, 1019, 1029, 1533
FauI	CCCGC	1 cut(s)	85
FbaI	TGATCA	1 cut(s)	1036
FokI	GGATG	6 cut(s)	278, 740, 1248, 1387, 1804, 1889
FspBI	CTAG	4 cut(s)	708, 744, 1275, 1638
GlaI	GCGC	1 cut(s)	150
GsaI	CCCAGC	3 cut(s)	351, 1165, 1730
GsuI	CTGGAG	2 cut(s)	1820, 1824
HaeIII	GGCC	3 cut(s)	1160, 1320, 1660
HapII	CCGG	6 cut(s)	47, 65, 77, 83, 89, 196
HgaI	GACGC	3 cut(s)	612, 791, 1367
HhaI	GCGC	1 cut(s)	151
Hin1I	GRCGYC	1 cut(s)	604
Hin1II	CATG	5 cut(s)	331, 562, 1023, 1033, 1537
Hin6I	GCGC	1 cut(s)	149
HinP1I	GCGC	1 cut(s)	149
HincII	GTYRAC	3 cut(s)	763, 1433, 1674
HindII	GTYRAC	3 cut(s)	763, 1433, 1674
HindIII	AAGCTT	2 cut(s)	680, 1101
HinfI	GANTC	7 cut(s)	52, 524, 906, 1278, 1559, 1711, 1835
HpaI	GTTAAC	1 cut(s)	763
HpaII	CCGG	6 cut(s)	47, 65, 77, 83, 89, 196
HphI	GGTGA	4 cut(s)	61, 1406, 1795, 1903
Hpy166II	GTNNAC	5 cut(s)	142, 763, 1433, 1454, 1674
Hpy188III	TCNNGA	9 cut(s)	100, 128, 341, 744, 956, 1062, 1245, 1706, 1841
Hpy8I	GTNNAC	5 cut(s)	142, 763, 1433, 1454, 1674
Hpy99I	CGWCG	1 cut(s)	606
HpyAV	CCTTC	5 cut(s)	841, 1174, 1331, 1427, 1892
HpyCH4III	ACNGT	5 cut(s)	139, 448, 510, 1508, 1616
HpyCH4IV	ACGT	4 cut(s)	105, 117, 1149, 1198
HpyF3I	CTNAG	5 cut(s)	24, 180, 1287, 1779, 1866
HpySE526I	ACGT	4 cut(s)	105, 117, 1149, 1198
Hsp92I	GRCGYC	1 cut(s)	604
Hsp92II	CATG	5 cut(s)	331, 562, 1023, 1033, 1537
HspAI	GCGC	1 cut(s)	149
Ksp22I	TGATCA	1 cut(s)	1036
KspAI	GTTAAC	1 cut(s)	763
LguI	GCTCTTC	1 cut(s)	353
LmnI	GCTCC	7 cut(s)	79, 85, 91, 283, 304, 988, 1396
LweI	GCATC	9 cut(s)	256, 463, 718, 737, 1339, 1365, 1587, 1713, 1834
MaeI	CTAG	4 cut(s)	708, 744, 1275, 1638
MaeII	ACGT	4 cut(s)	105, 117, 1149, 1198
MaeIII	GTNAC	6 cut(s)	49, 698, 1508, 1630, 1783, 1909
MbiI	CCGCTC	1 cut(s)	363
MboII	GAAGA	5 cut(s)	370, 680, 871, 1135, 1184
MfeI	CAATTG	1 cut(s)	795
MflI	RGATCY	2 cut(s)	1058, 1933
MhlI	GDGCHC	2 cut(s)	1219, 1273
MlyI	GAGTC	4 cut(s)	46, 1272, 1568, 1844
MmeI	TCCRAC	3 cut(s)	402, 568, 1498
MseI	TTAA	8 cut(s)	290, 384, 675, 762, 807, 822, 881, 1499
MspA1I	CMGCKG	3 cut(s)	470, 1165, 1294
MspCI	CTTAAG	1 cut(s)	674
MspI	CCGG	6 cut(s)	47, 65, 77, 83, 89, 196
MspR9I	CCNGG	8 cut(s)	197, 392, 1254, 1266, 1317, 1371, 1383, 1437
MunI	CAATTG	1 cut(s)	795
Mva1269I	GAATGC	2 cut(s)	225, 351
MvaI	CCWGG	7 cut(s)	392, 1254, 1266, 1317, 1371, 1383, 1437
MvnI	CGCG	1 cut(s)	342
NciI	CCSGG	1 cut(s)	197
NlaIII	CATG	5 cut(s)	331, 562, 1023, 1033, 1537
NlaIV	GGNNCC	6 cut(s)	75, 81, 87, 132, 445, 1272
NmuCI	GTSAC	4 cut(s)	49, 1630, 1783, 1909
NruI	TCGCGA	1 cut(s)	342
NspI	RCATGY	1 cut(s)	562
NspV	TTCGAA	2 cut(s)	625, 768
PaeI	GCATGC	1 cut(s)	562
PciSI	GCTCTTC	1 cut(s)	353
PctI	GAATGC	2 cut(s)	225, 351
PfeI	GAWTC	3 cut(s)	524, 906, 1711
PfoI	TCCNGGA	1 cut(s)	1252
PleI	GAGTC	4 cut(s)	46, 1272, 1567, 1843
PpsI	GAGTC	4 cut(s)	46, 1272, 1567, 1843
Ppu21I	YACGTR	1 cut(s)	118
PshAI	GACNNNNGTC	1 cut(s)	1907
Psp6I	CCWGG	7 cut(s)	390, 1252, 1264, 1315, 1369, 1381, 1435
PspFI	CCCAGC	3 cut(s)	347, 1161, 1726
PspGI	CCWGG	7 cut(s)	390, 1252, 1264, 1315, 1369, 1381, 1435
PspN4I	GGNNCC	6 cut(s)	75, 81, 87, 132, 445, 1272
PspPI	GGNCC	6 cut(s)	130, 444, 590, 1159, 1658, 1807
PstI	CTGCAG	1 cut(s)	1342
PstNI	CAGNNNCTG	1 cut(s)	1294
PsuI	RGATCY	2 cut(s)	1058, 1933
PvuII	CAGCTG	2 cut(s)	470, 1294
RruI	TCGCGA	1 cut(s)	342
RsaI	GTAC	6 cut(s)	116, 332, 450, 507, 1312, 1455
RsaNI	GTAC	6 cut(s)	115, 331, 449, 506, 1311, 1454
SapI	GCTCTTC	1 cut(s)	353
SaqAI	TTAA	8 cut(s)	290, 384, 675, 762, 807, 822, 881, 1499
Sau96I	GGNCC	6 cut(s)	130, 444, 590, 1159, 1658, 1807
SbfI	CCTGCAGG	1 cut(s)	1342
SchI	GAGTC	4 cut(s)	46, 1272, 1568, 1844
ScrFI	CCNGG	8 cut(s)	197, 392, 1254, 1266, 1317, 1371, 1383, 1437
SdaI	CCTGCAGG	1 cut(s)	1342
SduI	GDGCHC	2 cut(s)	1219, 1273
SfaNI	GCATC	9 cut(s)	256, 463, 718, 737, 1339, 1365, 1587, 1713, 1834
SfcI	CTRYAG	2 cut(s)	660, 1338
SfuI	TTCGAA	2 cut(s)	625, 768
SinI	GGWCC	4 cut(s)	130, 444, 590, 1807
SmlI	CTYRAG	3 cut(s)	674, 1525, 1850
SmoI	CTYRAG	3 cut(s)	674, 1525, 1850
SpeI	ACTAGT	1 cut(s)	707
SphI	GCATGC	1 cut(s)	562
Sse8387I	CCTGCAGG	1 cut(s)	1342
SspI	AATATT	1 cut(s)	631
SspMI	CTAG	4 cut(s)	708, 744, 1275, 1638
StyD4I	CCNGG	8 cut(s)	195, 390, 1252, 1264, 1315, 1369, 1381, 1435
StyI	CCWWGG	2 cut(s)	279, 1576
TaaI	ACNGT	5 cut(s)	139, 448, 510, 1508, 1616
TaiI	ACGT	4 cut(s)	108, 120, 1152, 1201
TaqI	TCGA	5 cut(s)	601, 625, 768, 1186, 1833
TatI	WGTACW	1 cut(s)	330
TauI	GCSGC	4 cut(s)	8, 11, 1467, 1495
TfiI	GAWTC	3 cut(s)	524, 906, 1711
Tru1I	TTAA	8 cut(s)	290, 384, 675, 762, 807, 822, 881, 1499
Tru9I	TTAA	8 cut(s)	290, 384, 675, 762, 807, 822, 881, 1499
TscAI	CASTG	2 cut(s)	484, 1668
TseFI	GTSAC	4 cut(s)	49, 1630, 1783, 1909
Tsp45I	GTSAC	4 cut(s)	49, 1630, 1783, 1909
TspDTI	ATGAA	7 cut(s)	609, 681, 1125, 1130, 1250, 1390, 1874
TspGWI	ACGGA	3 cut(s)	574, 1150, 1566
TspRI	CASTG	2 cut(s)	484, 1668
Vha464I	CTTAAG	1 cut(s)	674
VpaK11BI	GGWCC	4 cut(s)	130, 444, 590, 1807
XapI	RAATTY	6 cut(s)	292, 373, 616, 643, 1001, 1248
XbaI	TCTAGA	1 cut(s)	743
XceI	RCATGY	1 cut(s)	562
XspI	CTAG	4 cut(s)	708, 744, 1275, 1638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.