Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0012291

Physical Location & Seq

Genomic Coordinates Forward (+)

33479300 .. 33483520

Gene Structure 4221 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG188100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGTACTCTCATCGCGATCCCAGCATTCGGAAGAGCGGATATGCAAATTTATTTATCAAGAACCTGGAAAAATCTATTGATAACAAGGCATTGTTGGACACTTTTTCTGCCTTTGGGACCGTACTCTCTTGCAAGGTTGCAGCTGATGCCAGTGGTCAATCAAAAGGATATGGTTTCGTACAGTATGACAATGAGGAATCTGCAAATAATGCAATCAACAAGCTGAATGGCATGCTGATAAATGAGAAACAGGTTTCCGTTGGACCTTATGTTCGACGCCAGAGGTCAAATTCATTTCAAAATATTTATGTGAAAAATTTGTCAGAGACAACTACAGATGAAGACCTTAAGAAACTTTTTGGAAAATCTGGTAACATCACTAGTGCTGCAGTTATGAGGGATAATGGAAAGTCTAGATGCTTTGGCTTTGTTAACTTCGAAAACGCTAAAGACGCTGTTGCTGCAATTGATGAGTTTAATGGGACAACTTTTAATGATAAGGTTTTGTTTGTTGGGAAGGCTCAAAAGAAGATAGAGAGGCAGGCAGAGTTAAGAGCGAAGTTTGAACAGGAAAGAATCAGCAGATTTGAGAAGCTACAAGGTGCTAATTTATATCTGAAAAATCTTGATGACACCATAAATGATGACAAACTAAAGGAGCTATTCTCTGAATTTGGAACAATAACATCATGCAAGGTCATGCTTGATCATCAAGGAATGAGCAAGGGATCTGGATTTGTTGCCTTTTCTACCCCAGAGGAAGCTAACAAAGCTTTGAATGAAATGAATGGGAAGATGATTGGACGGAAGCCTCTATACGTTGCTGTGGCCCAGCGGAAAGAAGAGAGGAAGGCTCGATTACAGGCACGTTTTGCCCAAATCCGAGCACCAAGTGGAATGACACCTTTGCCGTCGGGAATTCCTGGATTTCATCCTGGGGCACCTAGACTCTCCCCTCAGCAGCTGTATTTTGGTCAAGGTACTCCTGGCCTTCTACCGCATCAGCCTGCAGGTTATGGCTTCCAGCAGCAAATCTTGCCTGGGATGCGTCCAGGTGTTGCTCCCAACTTCATTATGCCATATCACCTTCAGAGGCAAGGTCAACCTGGGCAGCGATTTGGTGTACGCCGAGGCGGCAACTTCCAACAAGTGCAGCAGCAGCCGCAGTTAATGCACCGTAACTCCAATCAAGGCTTGAGATACATGGGTAATGCTCGGAACGGAGTTGAGTCTCCTGTGTCTCCCCAAGGTCTTGTGAGTCCAATGATGCCTTTGCCCTTTGACGGTTCAGGTATGCCTGTGACATCAAGTGATATCCAGCGTTCTGGGCCAGTGCCTATGTCAACACTTGCTTCTGCTTTAGCTTCTGCTACTCCCGAGAATCAGCGTTTGGTATGTTATTCTGCTGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0031323 GO:0031329 GO:0034641 GO:0034645 GO:0034655 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1900151 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903311

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

470

Amino Acids

51.74

Weight (kDa)

9.66

Isoelectric Point (pI)

46.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	17 - 85	3e-20	RNA recognition motif
RRM_1	PF00076	102 - 169	2e-21	RNA recognition motif
RRM_1	PF00076	204 - 272	6.1e-21	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22760 AT1G71770 AT1G71770
fragaria_vesca	FvH4_2g12840
malus_domestica	MD05G1035900.v1.1 MD10G1038000.v1.1
prunus_persica	Prupe.8G043700_v2.0.a1
pyrus_communis	pycom05g02640 pycom10g02600
rosa_chinensis	RchiOBHm_Chr6g0273861
rosa_laevigata	RLG00000013594
rosa_multiflora	Rmu_ssc0000322.1_g000029
rosa_roxburghii	Rroxscaffold_7G00194960
rosa_rugosa	Rorug06G0077500
rosa_samantha	Rh6AG193000 Rh6BG196900 Rh6CG196100 Rh6DG188100
rosa_wichuraiana	Rw6G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1001
AccB1I	GGYRCC	1 cut(s)	940
AccBSI	CCGCTC	1 cut(s)	36
AccII	CGCG	1 cut(s)	15
AciI	CCGC	5 cut(s)	36, 835, 998, 1134, 1163
AclWI	GGATC	2 cut(s)	11, 736
AcsI	RAATTY	5 cut(s)	46, 289, 316, 671, 918
AcuI	CTGAAG	1 cut(s)	1073
AcyI	GRCGYC	1 cut(s)	277
AdeI	CACNNNGTG	1 cut(s)	893
AfaI	GTAC	5 cut(s)	5, 123, 180, 982, 1125
AfiI	CCNNNNNNNGG	2 cut(s)	27, 1283
AflII	CTTAAG	1 cut(s)	347
AgsI	TTSAA	3 cut(s)	299, 566, 778
AhlI	ACTAGT	1 cut(s)	380
AjnI	CCWGG	7 cut(s)	63, 922, 934, 985, 1039, 1051, 1105
AjuI	GAANNNNNNNTTGG	2 cut(s)	1373, 1405
AloI	GAACNNNNNNTCC	2 cut(s)	255, 287
AluBI	AGCT	8 cut(s)	143, 223, 595, 661, 764, 773, 964, 1364
AluI	AGCT	8 cut(s)	143, 223, 595, 661, 764, 773, 964, 1364
Alw21I	GWGCWC	1 cut(s)	889
Alw26I	GTCTC	3 cut(s)	320, 1236, 1245
AlwI	GGATC	2 cut(s)	11, 736
AlwNI	CAGNNNCTG	1 cut(s)	964
Ama87I	CYCGRG	1 cut(s)	1376
AoxI	GGCC	3 cut(s)	828, 988, 1328
ApeKI	GCWGC	9 cut(s)	140, 386, 461, 961, 1027, 1111, 1153, 1156, 1159
ApoI	RAATTY	5 cut(s)	46, 289, 316, 671, 918
ArsI	GACNNNNNNTTYG	2 cut(s)	255, 287
AspS9I	GGNCC	4 cut(s)	117, 263, 829, 1328
AsuHPI	GGTGA	1 cut(s)	1076
AsuII	TTCGAA	1 cut(s)	438
AvaI	CYCGRG	1 cut(s)	1376
AvaII	GGWCC	2 cut(s)	117, 263
BaeGI	GKGCMC	1 cut(s)	943
BaeI	ACNNNNGTAYC	2 cut(s)	1192, 1225
BanI	GGYRCC	1 cut(s)	940
BarI	GAAGNNNNNNTAC	2 cut(s)	800, 832
BbsI	GAAGAC	1 cut(s)	348
Bbv12I	GWGCWC	1 cut(s)	889
BbvCI	CCTCAGC	1 cut(s)	957
BbvI	GCAGC	9 cut(s)	152, 373, 448, 973, 1039, 1123, 1165, 1168, 1171
BceAI	ACGGC	1 cut(s)	895
BciT130I	CCWGG	7 cut(s)	65, 924, 936, 987, 1041, 1053, 1107
BclI	TGATCA	1 cut(s)	706
BcoDI	GTCTC	3 cut(s)	320, 1236, 1245
BcuI	ACTAGT	1 cut(s)	380
BfaI	CTAG	3 cut(s)	381, 414, 945
BfmI	CTRYAG	3 cut(s)	333, 387, 1008
BfrI	CTTAAG	1 cut(s)	347
BfuAI	ACCTGC	1 cut(s)	1001
BglI	GCCNNNNNGGC	1 cut(s)	1134
Bme1390I	CCNGG	7 cut(s)	65, 924, 936, 987, 1041, 1053, 1107
Bme18I	GGWCC	2 cut(s)	117, 263
BmeT110I	CYCGRG	1 cut(s)	1376
BmgT120I	GGNCC	4 cut(s)	117, 263, 829, 1328
BmiI	GGNNCC	2 cut(s)	118, 942
BmrFI	CCNGG	7 cut(s)	65, 924, 936, 987, 1041, 1053, 1107
BmsI	GCATC	5 cut(s)	136, 407, 1009, 1035, 1257
BpiI	GAAGAC	1 cut(s)	348
BplI	GAGNNNNNCTC	4 cut(s)	650, 682, 838, 870
Bpu10I	CCTNAGC	1 cut(s)	957
Bpu14I	TTCGAA	1 cut(s)	438
BpuEI	CTTGAG	1 cut(s)	1216
BsaHI	GRCGYC	1 cut(s)	277
BsaJI	CCNNGG	5 cut(s)	935, 1040, 1106, 1129, 1246
BsaXI	ACNNNNNCTCC	2 cut(s)	1166, 1196
Bsc4I	CCNNNNNNNGG	2 cut(s)	27, 1283
Bse1I	ACTGG	2 cut(s)	150, 1331
BseBI	CCWGG	7 cut(s)	65, 924, 936, 987, 1041, 1053, 1107
BseDI	CCNNGG	5 cut(s)	935, 1040, 1106, 1129, 1246
BseGI	GGATG	2 cut(s)	931, 1050
BseLI	CCNNNNNNNGG	2 cut(s)	27, 1283
BseMII	CTCAG	1 cut(s)	971
BseNI	ACTGG	2 cut(s)	150, 1331
BseSI	GKGCMC	1 cut(s)	943
BseXI	GCAGC	9 cut(s)	152, 373, 448, 973, 1039, 1123, 1165, 1168, 1171
BseYI	CCCAGC	2 cut(s)	20, 831
BsgI	GTGCAG	1 cut(s)	1172
Bsh1236I	CGCG	1 cut(s)	15
BshFI	GGCC	3 cut(s)	830, 990, 1330
BshNI	GGYRCC	1 cut(s)	940
BsiHKAI	GWGCWC	1 cut(s)	889
BsiHKCI	CYCGRG	1 cut(s)	1376
BslFI	GGGAC	2 cut(s)	130, 496
BslI	CCNNNNNNNGG	2 cut(s)	27, 1283
BsmAI	GTCTC	3 cut(s)	320, 1236, 1245
BsmFI	GGGAC	2 cut(s)	130, 496
BsmI	GAATGC	1 cut(s)	24
BsnI	GGCC	3 cut(s)	830, 990, 1330
BsoBI	CYCGRG	1 cut(s)	1376
Bsp119I	TTCGAA	1 cut(s)	438
Bsp1286I	GDGCHC	2 cut(s)	889, 943
Bsp143I	GATC	3 cut(s)	16, 706, 728
Bsp68I	TCGCGA	1 cut(s)	15
BspACI	CCGC	5 cut(s)	36, 835, 998, 1134, 1163
BspANI	GGCC	3 cut(s)	830, 990, 1330
BspCNI	CTCAG	1 cut(s)	970
BspFNI	CGCG	1 cut(s)	15
BspLI	GGNNCC	2 cut(s)	118, 942
BspMAI	CTGCAG	2 cut(s)	391, 1012
BspMI	ACCTGC	1 cut(s)	1001
BspPI	GGATC	2 cut(s)	11, 736
BspQI	GCTCTTC	1 cut(s)	26
BspT104I	TTCGAA	1 cut(s)	438
BspT107I	GGYRCC	1 cut(s)	940
BspTI	CTTAAG	1 cut(s)	347
BsrBI	CCGCTC	1 cut(s)	36
BsrI	ACTGG	2 cut(s)	150, 1331
BssECI	CCNNGG	5 cut(s)	935, 1040, 1106, 1129, 1246
BssMI	GATC	3 cut(s)	16, 706, 728
BssNI	GRCGYC	1 cut(s)	277
BssT1I	CCWWGG	1 cut(s)	1246
Bst2UI	CCWGG	7 cut(s)	65, 924, 936, 987, 1041, 1053, 1107
Bst4CI	ACNGT	4 cut(s)	121, 183, 1178, 1286
Bst6I	CTCTTC	2 cut(s)	26, 837
BstACI	GRCGYC	1 cut(s)	277
BstAFI	CTTAAG	1 cut(s)	347
BstAPI	GCANNNNNTGC	5 cut(s)	146, 209, 872, 1036, 1171
BstBI	TTCGAA	1 cut(s)	438
BstC8I	GCNNGC	3 cut(s)	233, 543, 1008
BstDEI	CTNAG	1 cut(s)	957
BstF5I	GGATG	2 cut(s)	931, 1050
BstFNI	CGCG	1 cut(s)	15
BstKTI	GATC	3 cut(s)	19, 709, 731
BstMAI	GTCTC	3 cut(s)	320, 1236, 1245
BstMBI	GATC	3 cut(s)	16, 706, 728
BstNI	CCWGG	7 cut(s)	65, 924, 936, 987, 1041, 1053, 1107
BstNSI	RCATGY	1 cut(s)	235
BstSCI	CCNGG	7 cut(s)	63, 922, 934, 985, 1039, 1051, 1105
BstSFI	CTRYAG	3 cut(s)	333, 387, 1008
BstSLI	GKGCMC	1 cut(s)	943
BstUI	CGCG	1 cut(s)	15
BstV1I	GCAGC	9 cut(s)	152, 373, 448, 973, 1039, 1123, 1165, 1168, 1171
BstV2I	GAAGAC	1 cut(s)	348
BstX2I	RGATCY	1 cut(s)	728
BstXI	CCANNNNNNTGG	1 cut(s)	1325
BstYI	RGATCY	1 cut(s)	728
BsuRI	GGCC	3 cut(s)	830, 990, 1330
BtsCI	GGATG	2 cut(s)	931, 1050
BtsIMutI	CAGTG	2 cut(s)	157, 1338
BtuMI	TCGCGA	1 cut(s)	15
BveI	ACCTGC	1 cut(s)	1001
Cac8I	GCNNGC	3 cut(s)	233, 543, 1008
CaiI	CAGNNNCTG	1 cut(s)	964
Cfr13I	GGNCC	4 cut(s)	117, 263, 829, 1328
CseI	GACGC	3 cut(s)	285, 461, 1037
Csp6I	GTAC	5 cut(s)	4, 122, 179, 981, 1124
CviAII	CATG	4 cut(s)	232, 690, 700, 1204
CviQI	GTAC	5 cut(s)	4, 122, 179, 981, 1124
DdeI	CTNAG	1 cut(s)	957
DpnI	GATC	3 cut(s)	18, 708, 730
DpnII	GATC	3 cut(s)	16, 706, 728
DraIII	CACNNNGTG	1 cut(s)	893
Eam1104I	CTCTTC	2 cut(s)	26, 837
EarI	CTCTTC	2 cut(s)	26, 837
Eco130I	CCWWGG	1 cut(s)	1246
Eco32I	GATATC	1 cut(s)	1315
Eco47I	GGWCC	2 cut(s)	117, 263
Eco57I	CTGAAG	1 cut(s)	1073
Eco88I	CYCGRG	1 cut(s)	1376
EcoRI	GAATTC	1 cut(s)	918
EcoRII	CCWGG	7 cut(s)	63, 922, 934, 985, 1039, 1051, 1105
EcoRV	GATATC	1 cut(s)	1315
EcoT14I	CCWWGG	1 cut(s)	1246
ErhI	CCWWGG	1 cut(s)	1246
FaeI	CATG	4 cut(s)	235, 693, 703, 1207
FaqI	GGGAC	2 cut(s)	130, 496
FatI	CATG	4 cut(s)	231, 689, 699, 1203
FbaI	TGATCA	1 cut(s)	706
FokI	GGATG	2 cut(s)	918, 1057
FspBI	CTAG	3 cut(s)	381, 414, 945
GsaI	CCCAGC	2 cut(s)	24, 835
HaeIII	GGCC	3 cut(s)	830, 990, 1330
HgaI	GACGC	3 cut(s)	285, 461, 1037
Hin1I	GRCGYC	1 cut(s)	277
Hin1II	CATG	4 cut(s)	235, 693, 703, 1207
HincII	GTYRAC	3 cut(s)	433, 1103, 1344
HindII	GTYRAC	3 cut(s)	433, 1103, 1344
HindIII	AAGCTT	1 cut(s)	771
HinfI	GANTC	6 cut(s)	197, 576, 948, 1229, 1258, 1381
HpaI	GTTAAC	1 cut(s)	433
HphI	GGTGA	1 cut(s)	1076
Hpy166II	GTNNAC	4 cut(s)	433, 1103, 1124, 1344
Hpy188I	TCNGA	7 cut(s)	30, 325, 618, 670, 884, 1092, 1218
Hpy188III	TCNNGA	7 cut(s)	14, 58, 414, 626, 732, 915, 1376
Hpy8I	GTNNAC	4 cut(s)	433, 1103, 1124, 1344
Hpy99I	CGWCG	2 cut(s)	279, 916
HpyAV	CCTTC	4 cut(s)	511, 844, 1001, 1097
HpyCH4III	ACNGT	4 cut(s)	121, 183, 1178, 1286
HpyCH4IV	ACGT	2 cut(s)	819, 868
HpyF3I	CTNAG	1 cut(s)	957
HpySE526I	ACGT	2 cut(s)	819, 868
Hsp92I	GRCGYC	1 cut(s)	277
Hsp92II	CATG	4 cut(s)	235, 693, 703, 1207
Ksp22I	TGATCA	1 cut(s)	706
KspAI	GTTAAC	1 cut(s)	433
Kzo9I	GATC	3 cut(s)	16, 706, 728
LguI	GCTCTTC	1 cut(s)	26
LmnI	GCTCC	2 cut(s)	658, 1066
Lsp1109I	GCAGC	9 cut(s)	152, 373, 448, 973, 1039, 1123, 1165, 1168, 1171
LweI	GCATC	5 cut(s)	136, 407, 1009, 1035, 1257
MaeI	CTAG	3 cut(s)	381, 414, 945
MaeII	ACGT	2 cut(s)	819, 868
MaeIII	GTNAC	3 cut(s)	371, 1178, 1300
MalI	GATC	3 cut(s)	18, 708, 730
MbiI	CCGCTC	1 cut(s)	36
MboI	GATC	3 cut(s)	16, 706, 728
MboII	GAAGA	5 cut(s)	43, 353, 541, 805, 854
MfeI	CAATTG	1 cut(s)	465
MflI	RGATCY	1 cut(s)	728
MhlI	GDGCHC	2 cut(s)	889, 943
MluCI	AATT	7 cut(s)	46, 289, 316, 465, 607, 671, 918
MlyI	GAGTC	3 cut(s)	942, 1238, 1267
MmeI	TCCRAC	3 cut(s)	75, 241, 1168
MseI	TTAA	6 cut(s)	348, 432, 477, 492, 551, 1169
MspA1I	CMGCKG	3 cut(s)	143, 835, 964
MspCI	CTTAAG	1 cut(s)	347
MspR9I	CCNGG	7 cut(s)	65, 924, 936, 987, 1041, 1053, 1107
MunI	CAATTG	1 cut(s)	465
Mva1269I	GAATGC	1 cut(s)	24
MvaI	CCWGG	7 cut(s)	65, 924, 936, 987, 1041, 1053, 1107
MvnI	CGCG	1 cut(s)	15
NdeII	GATC	3 cut(s)	16, 706, 728
NlaIII	CATG	4 cut(s)	235, 693, 703, 1207
NlaIV	GGNNCC	2 cut(s)	118, 942
NmeAIII	GCCGAG	1 cut(s)	1154
NmuCI	GTSAC	1 cut(s)	1300
NruI	TCGCGA	1 cut(s)	15
NspI	RCATGY	1 cut(s)	235
NspV	TTCGAA	1 cut(s)	438
PaeI	GCATGC	1 cut(s)	235
PciSI	GCTCTTC	1 cut(s)	26
PctI	GAATGC	1 cut(s)	24
PfeI	GAWTC	3 cut(s)	197, 576, 1381
PfoI	TCCNGGA	1 cut(s)	922
PleI	GAGTC	3 cut(s)	942, 1237, 1266
PpsI	GAGTC	3 cut(s)	942, 1237, 1266
Psp6I	CCWGG	7 cut(s)	63, 922, 934, 985, 1039, 1051, 1105
PspFI	CCCAGC	2 cut(s)	20, 831
PspGI	CCWGG	7 cut(s)	63, 922, 934, 985, 1039, 1051, 1105
PspN4I	GGNNCC	2 cut(s)	118, 942
PspPI	GGNCC	4 cut(s)	117, 263, 829, 1328
PstI	CTGCAG	2 cut(s)	391, 1012
PstNI	CAGNNNCTG	1 cut(s)	964
PsuI	RGATCY	1 cut(s)	728
PvuII	CAGCTG	2 cut(s)	143, 964
RruI	TCGCGA	1 cut(s)	15
RsaI	GTAC	5 cut(s)	5, 123, 180, 982, 1125
RsaNI	GTAC	5 cut(s)	4, 122, 179, 981, 1124
SapI	GCTCTTC	1 cut(s)	26
SaqAI	TTAA	6 cut(s)	348, 432, 477, 492, 551, 1169
Sau3AI	GATC	3 cut(s)	16, 706, 728
Sau96I	GGNCC	4 cut(s)	117, 263, 829, 1328
SbfI	CCTGCAGG	1 cut(s)	1012
SchI	GAGTC	3 cut(s)	942, 1238, 1267
ScrFI	CCNGG	7 cut(s)	65, 924, 936, 987, 1041, 1053, 1107
SdaI	CCTGCAGG	1 cut(s)	1012
SduI	GDGCHC	2 cut(s)	889, 943
SfaNI	GCATC	5 cut(s)	136, 407, 1009, 1035, 1257
SfcI	CTRYAG	3 cut(s)	333, 387, 1008
SfuI	TTCGAA	1 cut(s)	438
SinI	GGWCC	2 cut(s)	117, 263
SmlI	CTYRAG	2 cut(s)	347, 1195
SmoI	CTYRAG	2 cut(s)	347, 1195
SpeI	ACTAGT	1 cut(s)	380
SphI	GCATGC	1 cut(s)	235
Sse8387I	CCTGCAGG	1 cut(s)	1012
Sse9I	AATT	7 cut(s)	46, 289, 316, 465, 607, 671, 918
SsiI	CCGC	5 cut(s)	36, 835, 998, 1134, 1163
SspI	AATATT	1 cut(s)	304
SspMI	CTAG	3 cut(s)	381, 414, 945
StyD4I	CCNGG	7 cut(s)	63, 922, 934, 985, 1039, 1051, 1105
StyI	CCWWGG	1 cut(s)	1246
TaaI	ACNGT	4 cut(s)	121, 183, 1178, 1286
TaiI	ACGT	2 cut(s)	822, 871
TaqI	TCGA	3 cut(s)	274, 438, 856
TasI	AATT	7 cut(s)	46, 289, 316, 465, 607, 671, 918
TatI	WGTACW	1 cut(s)	3
TauI	GCSGC	2 cut(s)	1137, 1165
TfiI	GAWTC	3 cut(s)	197, 576, 1381
Tru1I	TTAA	6 cut(s)	348, 432, 477, 492, 551, 1169
Tru9I	TTAA	6 cut(s)	348, 432, 477, 492, 551, 1169
TscAI	CASTG	2 cut(s)	157, 1338
TseFI	GTSAC	1 cut(s)	1300
TseI	GCWGC	9 cut(s)	140, 386, 461, 961, 1027, 1111, 1153, 1156, 1159
Tsp45I	GTSAC	1 cut(s)	1300
TspDTI	ATGAA	6 cut(s)	282, 354, 795, 800, 920, 1060
TspGWI	ACGGA	3 cut(s)	247, 820, 1236
TspRI	CASTG	2 cut(s)	157, 1338
Vha464I	CTTAAG	1 cut(s)	347
VpaK11BI	GGWCC	2 cut(s)	117, 263
XapI	RAATTY	5 cut(s)	46, 289, 316, 671, 918
XbaI	TCTAGA	1 cut(s)	413
XceI	RCATGY	1 cut(s)	235
XspI	CTAG	3 cut(s)	381, 414, 945

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.