Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0012291

Physical Location & Seq

Genomic Coordinates Reverse (-)

4986449 .. 4990540

Gene Structure 4092 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1038000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGCGGCGGCGGTATCGGGTCCGGTGGCTCAACCAGTGTCTCCGGCGGCTCAACAGGCGCCGCCGGTTGCGGCTCCGTCGGTTTTCGGGAACGTGTCGCTGTACGTGGGCGATCTGGACCCGAGTGTGAACGAAGCGCAGCTGTACGATCTGTTCAACCAAATGGGGCAGATCGTTTCGATTCGGGTCTGTCGGGATCAGAGCCGAATGCAATCCCTCGGCTATGCCTACGTTAATTACGGCGATCCTCAGCACGCTGCTAATGCCCTGGAGGTTTTGAATTTTACTCCGATCAATGGGAAACCCATCAGGATTATGTACTCTCATCGTGATCCAAGCATTCGGAAGAGCGGAAAGGCCAATGTGTTCATTAAGAACCTGGACAAAAGTATTGATCATAAGGCGTTGTTGGACACTTTTTCAACCTTTGGCAACGTACTTTCTTGCAAGGTTGCACTTGATGGCAACGGTCAATCGAAAGGGTATGGGTTCGTACAGTATGACAATGAGGAATCTGCGCAGGAGGCGATCAAGAAGCTGAACAAAATGCTGATAAATGGAAAACTGGTTTATGTTGGACTGTTTCAACGAGGCCAGGAAAGGAATGGGCAAAATGGATCACCACATTTCACTAATGTTTATGTGAAGAATTTGTCAGAGACGACGACAGATGAAGACCTTAAGAAAACTTTTGGTGAGCATGGTAACATTACCAGTGCGGTTGTTATGAGGGATGGTTCTGGAAAGTCAAGATGTTTTGGTTTTGTTAACTTTGAGAAGCCAGAAGAAGCTGCTGCTGCAATTGAGAAGTTGAATGGGAGCACCGTTAGTGGTGACAAGGTTTTGTTTGTCGGGAGGGCTCAAAGGAAATCTGAGAGGGAGGCGGAGTTGAGAGCTAAGTTTGAACAGGAAAGGCTCAGTAGATTTGAGAAGCTACAAGGTGCTAATTTATATCTCAAAAATCTTGATGACACAGTAAATGATGAAAAACTAAAGGAGCTATTTTCTGAATTTGGAACAATAACATCGTGCAAGGTCATGCTTGATCACCAAGGGGTGAGCAAGGGTTCTGGATTTGTTGCATTTTCTACTCCGGAAGAAGCCAATAAAGCCTTGGCCGAGATGAGTGGCAAGATGATTGGACGGAAGCCTTTGTATGTTGCCGTGGCCCAACGCAAAGAAGAGCGCAAGGCTCGATTACAGGCACGTTTTGCCCAAATCCGAGCACCAGGTGGGATGTCACCATTGCCATCGGGAATTCCTGCATATCATCCTGGGGCACCTAGACTTGCCCCGCAACAACTGTATTTTGGTCAAGGTTCTGGCATTCTACCCCATCAGCCTGCTGGTTATGGCTTCCAGCAGCAGCTAGTGCCTGGCATGCGCCCGGGTAACTTCATTATGCCATACCACCTTCAGAGGCAAGGTCAACCTGGGCAGCGGATGGGTGTACGGCGAAGTGGGAACTTCCAACATGTGCAGCAGCAGCAGTTACTGCACCGTAATTCCAATCAAGGCTTGAGATACATGGGCAATGCACGGAATGGAGTGGACCCATCTTTGGCTCCTCAAGGTCTTGTGGGTCCAATGATGCCTTTGCCACTTGACGGTGCAGGGCTGCCTGTGTCTCCTAATGATATCCATCGTTCTGGGCCGTTGCCAACGTCAACACTTGCTTCAGCTTTAGCTTCTGCTACCCCAGAGAATCAGCGTTTGATGCTGGGTGAACAACTATATCCACTTGTTGAGCGGATTGAGCCTGAACACACGGCTAAGGTGACAGGGATGTTGCTAGAGATGGACCAGACGGAAGTTCTCCATCTGATCGAGTCTCCAGATGCCTTGAAGAACAAGGTAGCTGAGGCAATGGATGTTCTGCGTACAGCTGCAACGAAGTCTGACGTTACTGATCAGCTTGGTGCATTGGATCTGAATGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0031323 GO:0031329 GO:0034641 GO:0034645 GO:0034655 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1900151 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903311

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

647

Amino Acids

70.54

Weight (kDa)

8.83

Isoelectric Point (pI)

40.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	34 - 104	6.2e-17	RNA recognition motif
RRM_1	PF00076	122 - 190	2e-20	RNA recognition motif
RRM_1	PF00076	213 - 280	1.6e-21	RNA recognition motif
RRM_1	PF00076	317 - 385	1.3e-19	RNA recognition motif
MLLE	PF00658	561 - 626	8.1e-29	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22760 AT1G71770 AT1G71770
fragaria_vesca	FvH4_2g12840
malus_domestica	MD05G1035900.v1.1 MD10G1038000.v1.1
prunus_persica	Prupe.8G043700_v2.0.a1
pyrus_communis	pycom05g02640 pycom10g02600
rosa_chinensis	RchiOBHm_Chr6g0273861
rosa_laevigata	RLG00000013594
rosa_multiflora	Rmu_ssc0000322.1_g000029
rosa_roxburghii	Rroxscaffold_7G00194960
rosa_rugosa	Rorug06G0077500
rosa_samantha	Rh6AG193000 Rh6BG196900 Rh6CG196100 Rh6DG188100
rosa_wichuraiana	Rw6G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	519
AccB1I	GGYRCC	2 cut(s)	58, 1279
AccBSI	CCGCTC	2 cut(s)	351, 1750
AccIII	TCCGGA	1 cut(s)	1093
AclWI	GGATC	5 cut(s)	204, 239, 326, 625, 1935
AcoI	YGGCCR	1 cut(s)	1116
AcsI	RAATTY	4 cut(s)	280, 649, 1010, 1257
AcuI	CTGAAG	2 cut(s)	1400, 1662
AcyI	GRCGYC	1 cut(s)	59
AdeI	CACNNNGTG	1 cut(s)	1232
AfaI	GTAC	7 cut(s)	104, 146, 320, 438, 495, 1452, 1882
AfiI	CCNNNNNNNGG	3 cut(s)	296, 1561, 1607
AflII	CTTAAG	1 cut(s)	680
AflIII	ACRYGT	2 cut(s)	93, 1474
AgsI	TTSAA	7 cut(s)	157, 280, 423, 587, 814, 905, 1846
AjnI	CCWGG	7 cut(s)	267, 378, 594, 1228, 1273, 1375, 1432
Alw21I	GWGCWC	2 cut(s)	824, 1228
Alw26I	GTCTC	4 cut(s)	45, 653, 1632, 1836
AlwI	GGATC	5 cut(s)	204, 239, 326, 625, 1935
AlwNI	CAGNNNCTG	1 cut(s)	1495
Ama87I	CYCGRG	2 cut(s)	121, 1387
Aor13HI	TCCGGA	1 cut(s)	1093
AoxI	GGCC	5 cut(s)	357, 592, 1116, 1167, 1652
ApoI	RAATTY	4 cut(s)	280, 649, 1010, 1257
AspLEI	GCGC	5 cut(s)	61, 139, 520, 1188, 1386
AspS9I	GGNCC	7 cut(s)	20, 118, 1168, 1552, 1583, 1652, 1801
AsuC2I	CCSGG	2 cut(s)	1388, 1389
AsuHPI	GGTGA	8 cut(s)	612, 707, 845, 1040, 1069, 1233, 1736, 1789
AvaI	CYCGRG	2 cut(s)	121, 1387
AvaII	GGWCC	5 cut(s)	20, 118, 1552, 1583, 1801
BaeGI	GKGCMC	1 cut(s)	1282
BanI	GGYRCC	2 cut(s)	58, 1279
BanII	GRGCYC	1 cut(s)	862
BbsI	GAAGAC	1 cut(s)	681
Bbv12I	GWGCWC	2 cut(s)	824, 1228
BbvCI	CCTCAGC	2 cut(s)	249, 1860
BceAI	ACGGC	5 cut(s)	256, 1148, 1469, 1639, 1785
BciT130I	CCWGG	7 cut(s)	269, 380, 596, 1230, 1275, 1377, 1434
BclI	TGATCA	3 cut(s)	394, 1045, 1909
BcnI	CCSGG	2 cut(s)	1388, 1389
BcoDI	GTCTC	4 cut(s)	45, 653, 1632, 1836
BfaI	CTAG	3 cut(s)	1284, 1370, 1793
BfoI	RGCGCY	1 cut(s)	62
BfrI	CTTAAG	1 cut(s)	680
Bme1390I	CCNGG	9 cut(s)	269, 380, 596, 1230, 1275, 1377, 1388, 1389, 1434
Bme18I	GGWCC	5 cut(s)	20, 118, 1552, 1583, 1801
BmeT110I	CYCGRG	2 cut(s)	121, 1387
BmgT120I	GGNCC	7 cut(s)	20, 118, 1168, 1552, 1583, 1652, 1801
BmiI	GGNNCC	8 cut(s)	21, 60, 75, 120, 1281, 1554, 1566, 1584
BmrFI	CCNGG	9 cut(s)	269, 380, 596, 1230, 1275, 1377, 1388, 1389, 1434
BmsI	GCATC	3 cut(s)	1581, 1707, 1828
BpiI	GAAGAC	1 cut(s)	681
BpmI	CTGGAG	2 cut(s)	290, 1818
Bpu10I	CCTNAGC	3 cut(s)	249, 1773, 1860
BpuEI	CTTGAG	2 cut(s)	1540, 1554
BpuMI	CCSGG	2 cut(s)	1388, 1389
BsaAI	YACGTR	1 cut(s)	106
BsaBI	GATNNNNATC	1 cut(s)	1641
BsaHI	GRCGYC	1 cut(s)	59
BsaJI	CCNNGG	8 cut(s)	217, 267, 1051, 1113, 1164, 1274, 1387, 1433
BsaWI	WCCGGW	2 cut(s)	22, 1093
BsaXI	ACNNNNNCTCC	2 cut(s)	872, 902
Bsc4I	CCNNNNNNNGG	3 cut(s)	296, 1561, 1607
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	3 cut(s)	35, 570, 714
Bse3DI	GCAATG	3 cut(s)	1244, 1540, 1872
Bse8I	GATNNNNATC	1 cut(s)	1641
BseAI	TCCGGA	1 cut(s)	1093
BseBI	CCWGG	7 cut(s)	269, 380, 596, 1230, 1275, 1377, 1434
BseDI	CCNNGG	8 cut(s)	217, 267, 1051, 1113, 1164, 1274, 1387, 1433
BseGI	GGATG	6 cut(s)	739, 1242, 1270, 1449, 1791, 1876
BseJI	GATNNNNATC	1 cut(s)	1641
BseLI	CCNNNNNNNGG	3 cut(s)	296, 1561, 1607
BseMI	GCAATG	3 cut(s)	1244, 1540, 1872
BseMII	CTCAG	4 cut(s)	263, 864, 931, 1851
BseNI	ACTGG	3 cut(s)	35, 570, 714
BseRI	GAGGAG	1 cut(s)	1557
BseSI	GKGCMC	1 cut(s)	1282
BseYI	CCCAGC	1 cut(s)	1720
BsgI	GTGCAG	3 cut(s)	1481, 1499, 1632
BshFI	GGCC	5 cut(s)	359, 594, 1118, 1169, 1654
BshNI	GGYRCC	2 cut(s)	58, 1279
BsiHKAI	GWGCWC	2 cut(s)	824, 1228
BsiHKCI	CYCGRG	2 cut(s)	121, 1387
BsiSI	CCGG	5 cut(s)	23, 44, 65, 1094, 1388
BslI	CCNNNNNNNGG	3 cut(s)	296, 1561, 1607
BsmAI	GTCTC	4 cut(s)	45, 653, 1632, 1836
BsmBI	CGTCTC	1 cut(s)	653
BsmI	GAATGC	3 cut(s)	213, 339, 1326
BsnI	GGCC	5 cut(s)	359, 594, 1118, 1169, 1654
BsoBI	CYCGRG	2 cut(s)	121, 1387
Bsp1286I	GDGCHC	4 cut(s)	824, 862, 1228, 1282
Bsp13I	TCCGGA	1 cut(s)	1093
BspANI	GGCC	5 cut(s)	359, 594, 1118, 1169, 1654
BspCNI	CTCAG	4 cut(s)	262, 865, 930, 1852
BspEI	TCCGGA	1 cut(s)	1093
BspLI	GGNNCC	8 cut(s)	21, 60, 75, 120, 1281, 1554, 1566, 1584
BspPI	GGATC	5 cut(s)	204, 239, 326, 625, 1935
BspQI	GCTCTTC	2 cut(s)	341, 1176
BspT107I	GGYRCC	2 cut(s)	58, 1279
BspTI	CTTAAG	1 cut(s)	680
BsrBI	CCGCTC	2 cut(s)	351, 1750
BsrDI	GCAATG	3 cut(s)	1244, 1540, 1872
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	3 cut(s)	35, 570, 714
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	8 cut(s)	217, 267, 1051, 1113, 1164, 1274, 1387, 1433
BssNI	GRCGYC	1 cut(s)	59
BssT1I	CCWWGG	2 cut(s)	1051, 1113
Bst2UI	CCWGG	7 cut(s)	269, 380, 596, 1230, 1275, 1377, 1434
Bst4CI	ACNGT	8 cut(s)	470, 498, 582, 826, 976, 1305, 1502, 1610
Bst6I	CTCTTC	2 cut(s)	341, 1176
BstACI	GRCGYC	1 cut(s)	59
BstAFI	CTTAAG	1 cut(s)	680
BstAPI	GCANNNNNTGC	3 cut(s)	1211, 1372, 1495
BstBAI	YACGTR	1 cut(s)	106
BstC8I	GCNNGC	3 cut(s)	255, 1344, 1382
BstDEI	CTNAG	6 cut(s)	249, 873, 897, 917, 1773, 1860
BstDSI	CCRYGG	1 cut(s)	1164
BstF5I	GGATG	6 cut(s)	739, 1242, 1270, 1449, 1791, 1876
BstH2I	RGCGCY	1 cut(s)	62
BstHHI	GCGC	5 cut(s)	61, 139, 520, 1188, 1386
BstMAI	GTCTC	4 cut(s)	45, 653, 1632, 1836
BstNI	CCWGG	7 cut(s)	269, 380, 596, 1230, 1275, 1377, 1434
BstNSI	RCATGY	2 cut(s)	1384, 1478
BstSCI	CCNGG	9 cut(s)	267, 378, 594, 1228, 1273, 1375, 1386, 1387, 1432
BstSLI	GKGCMC	1 cut(s)	1282
BstV2I	GAAGAC	1 cut(s)	681
BstX2I	RGATCY	1 cut(s)	1927
BstXI	CCANNNNNNTGG	1 cut(s)	1649
BstYI	RGATCY	1 cut(s)	1927
BsuRI	GGCC	5 cut(s)	359, 594, 1118, 1169, 1654
BtgI	CCRYGG	1 cut(s)	1164
BtsCI	GGATG	6 cut(s)	739, 1242, 1270, 1449, 1791, 1876
BtsIMutI	CAGTG	2 cut(s)	42, 721
Cac8I	GCNNGC	3 cut(s)	255, 1344, 1382
CaiI	CAGNNNCTG	1 cut(s)	1495
CfoI	GCGC	5 cut(s)	61, 139, 520, 1188, 1386
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	7 cut(s)	20, 118, 1168, 1552, 1583, 1652, 1801
Cfr9I	CCCGGG	1 cut(s)	1387
CsiI	ACCWGGT	1 cut(s)	1228
Csp6I	GTAC	7 cut(s)	103, 145, 319, 437, 494, 1451, 1881
CviAII	CATG	5 cut(s)	701, 1039, 1381, 1475, 1528
CviQI	GTAC	7 cut(s)	103, 145, 319, 437, 494, 1451, 1881
DdeI	CTNAG	6 cut(s)	249, 873, 897, 917, 1773, 1860
DinI	GGCGCC	1 cut(s)	60
DraIII	CACNNNGTG	1 cut(s)	1232
EaeI	YGGCCR	1 cut(s)	1116
Eam1104I	CTCTTC	2 cut(s)	341, 1176
EarI	CTCTTC	2 cut(s)	341, 1176
EciI	GGCGGA	1 cut(s)	899
Eco130I	CCWWGG	2 cut(s)	1051, 1113
Eco24I	GRGCYC	1 cut(s)	862
Eco32I	GATATC	1 cut(s)	1639
Eco47I	GGWCC	5 cut(s)	20, 118, 1552, 1583, 1801
Eco57I	CTGAAG	2 cut(s)	1400, 1662
Eco88I	CYCGRG	2 cut(s)	121, 1387
EcoRI	GAATTC	1 cut(s)	1257
EcoRII	CCWGG	7 cut(s)	267, 378, 594, 1228, 1273, 1375, 1432
EcoRV	GATATC	1 cut(s)	1639
EcoT14I	CCWWGG	2 cut(s)	1051, 1113
EcoT38I	GRGCYC	1 cut(s)	862
EgeI	GGCGCC	1 cut(s)	60
EheI	GGCGCC	1 cut(s)	60
ErhI	CCWWGG	2 cut(s)	1051, 1113
Esp3I	CGTCTC	1 cut(s)	653
FaeI	CATG	5 cut(s)	704, 1042, 1384, 1478, 1531
FatI	CATG	5 cut(s)	700, 1038, 1380, 1474, 1527
FauI	CCCGC	1 cut(s)	1302
FbaI	TGATCA	3 cut(s)	394, 1045, 1909
FokI	GGATG	6 cut(s)	746, 1249, 1257, 1456, 1798, 1883
FriOI	GRGCYC	1 cut(s)	862
FspBI	CTAG	3 cut(s)	1284, 1370, 1793
FspI	TGCGCA	1 cut(s)	519
GlaI	GCGC	5 cut(s)	60, 138, 519, 1187, 1385
GsaI	CCCAGC	1 cut(s)	1724
GsuI	CTGGAG	2 cut(s)	290, 1818
HaeII	RGCGCY	1 cut(s)	62
HaeIII	GGCC	5 cut(s)	359, 594, 1118, 1169, 1654
HapII	CCGG	5 cut(s)	23, 44, 65, 1094, 1388
HhaI	GCGC	5 cut(s)	61, 139, 520, 1188, 1386
Hin1I	GRCGYC	1 cut(s)	59
Hin1II	CATG	5 cut(s)	704, 1042, 1384, 1478, 1531
Hin6I	GCGC	5 cut(s)	59, 137, 518, 1186, 1384
HinP1I	GCGC	5 cut(s)	59, 137, 518, 1186, 1384
HincII	GTYRAC	3 cut(s)	769, 1430, 1668
HindII	GTYRAC	3 cut(s)	769, 1430, 1668
HinfI	GANTC	4 cut(s)	181, 512, 1705, 1829
HpaI	GTTAAC	1 cut(s)	769
HpaII	CCGG	5 cut(s)	23, 44, 65, 1094, 1388
HphI	GGTGA	8 cut(s)	612, 707, 845, 1040, 1069, 1233, 1736, 1789
Hpy166II	GTNNAC	7 cut(s)	130, 769, 1430, 1451, 1552, 1668, 1727
Hpy8I	GTNNAC	7 cut(s)	130, 769, 1430, 1451, 1552, 1668, 1727
Hpy99I	CGWCG	2 cut(s)	82, 667
HpyAV	CCTTC	1 cut(s)	1424
HpyCH4III	ACNGT	8 cut(s)	470, 498, 582, 826, 976, 1305, 1502, 1610
HpyCH4IV	ACGT	7 cut(s)	93, 105, 231, 435, 1207, 1664, 1902
HpyF3I	CTNAG	6 cut(s)	249, 873, 897, 917, 1773, 1860
HpySE526I	ACGT	7 cut(s)	93, 105, 231, 435, 1207, 1664, 1902
Hsp92I	GRCGYC	1 cut(s)	59
Hsp92II	CATG	5 cut(s)	704, 1042, 1384, 1478, 1531
HspAI	GCGC	5 cut(s)	59, 137, 518, 1186, 1384
KasI	GGCGCC	1 cut(s)	58
Kpn2I	TCCGGA	1 cut(s)	1093
Ksp22I	TGATCA	3 cut(s)	394, 1045, 1909
KspAI	GTTAAC	1 cut(s)	769
LguI	GCTCTTC	2 cut(s)	341, 1176
LmnI	GCTCC	4 cut(s)	79, 819, 997, 1570
LweI	GCATC	3 cut(s)	1581, 1707, 1828
MabI	ACCWGGT	1 cut(s)	1228
MaeI	CTAG	3 cut(s)	1284, 1370, 1793
MaeII	ACGT	7 cut(s)	93, 105, 231, 435, 1207, 1664, 1902
MaeIII	GTNAC	7 cut(s)	704, 833, 1239, 1391, 1491, 1777, 1903
MbiI	CCGCTC	2 cut(s)	351, 1750
MboII	GAAGA	7 cut(s)	358, 658, 686, 797, 1109, 1193, 1858
MfeI	CAATTG	1 cut(s)	801
MflI	RGATCY	1 cut(s)	1927
MhlI	GDGCHC	4 cut(s)	824, 862, 1228, 1282
MluCI	AATT	8 cut(s)	235, 280, 649, 801, 946, 1010, 1257, 1504
Mly113I	GGCGCC	1 cut(s)	59
MlyI	GAGTC	1 cut(s)	1838
MmeI	TCCRAC	3 cut(s)	390, 556, 1495
MroI	TCCGGA	1 cut(s)	1093
MseI	TTAA	4 cut(s)	234, 372, 681, 768
MspA1I	CMGCKG	3 cut(s)	142, 1441, 1886
MspCI	CTTAAG	1 cut(s)	680
MspI	CCGG	5 cut(s)	23, 44, 65, 1094, 1388
MspR9I	CCNGG	9 cut(s)	269, 380, 596, 1230, 1275, 1377, 1388, 1389, 1434
MunI	CAATTG	1 cut(s)	801
Mva1269I	GAATGC	3 cut(s)	213, 339, 1326
MvaI	CCWGG	7 cut(s)	269, 380, 596, 1230, 1275, 1377, 1434
NarI	GGCGCC	1 cut(s)	59
NciI	CCSGG	2 cut(s)	1388, 1389
NlaIII	CATG	5 cut(s)	704, 1042, 1384, 1478, 1531
NlaIV	GGNNCC	8 cut(s)	21, 60, 75, 120, 1281, 1554, 1566, 1584
NmeAIII	GCCGAG	2 cut(s)	198, 1144
NmuCI	GTSAC	3 cut(s)	833, 1239, 1777
NsbI	TGCGCA	1 cut(s)	519
NspI	RCATGY	2 cut(s)	1384, 1478
PaeI	GCATGC	1 cut(s)	1384
PciI	ACATGT	1 cut(s)	1474
PciSI	GCTCTTC	2 cut(s)	341, 1176
PctI	GAATGC	3 cut(s)	213, 339, 1326
PfeI	GAWTC	3 cut(s)	181, 512, 1705
PleI	GAGTC	1 cut(s)	1837
PluTI	GGCGCC	1 cut(s)	62
PpsI	GAGTC	1 cut(s)	1837
Ppu21I	YACGTR	1 cut(s)	106
PscI	ACATGT	1 cut(s)	1474
Psp6I	CCWGG	7 cut(s)	267, 378, 594, 1228, 1273, 1375, 1432
PspFI	CCCAGC	1 cut(s)	1720
PspGI	CCWGG	7 cut(s)	267, 378, 594, 1228, 1273, 1375, 1432
PspN4I	GGNNCC	8 cut(s)	21, 60, 75, 120, 1281, 1554, 1566, 1584
PspPI	GGNCC	7 cut(s)	20, 118, 1168, 1552, 1583, 1652, 1801
PsrI	GAACNNNNNNTAC	2 cut(s)	137, 169
PstNI	CAGNNNCTG	1 cut(s)	1495
PsuI	RGATCY	1 cut(s)	1927
PvuII	CAGCTG	2 cut(s)	142, 1886
RsaI	GTAC	7 cut(s)	104, 146, 320, 438, 495, 1452, 1882
RsaNI	GTAC	7 cut(s)	103, 145, 319, 437, 494, 1451, 1881
SapI	GCTCTTC	2 cut(s)	341, 1176
SaqAI	TTAA	4 cut(s)	234, 372, 681, 768
Sau96I	GGNCC	7 cut(s)	20, 118, 1168, 1552, 1583, 1652, 1801
SchI	GAGTC	1 cut(s)	1838
ScrFI	CCNGG	9 cut(s)	269, 380, 596, 1230, 1275, 1377, 1388, 1389, 1434
SduI	GDGCHC	4 cut(s)	824, 862, 1228, 1282
SexAI	ACCWGGT	1 cut(s)	1228
SfaNI	GCATC	3 cut(s)	1581, 1707, 1828
SfoI	GGCGCC	1 cut(s)	60
SinI	GGWCC	5 cut(s)	20, 118, 1552, 1583, 1801
SmaI	CCCGGG	1 cut(s)	1389
SmlI	CTYRAG	3 cut(s)	680, 1519, 1569
SmoI	CTYRAG	3 cut(s)	680, 1519, 1569
SphI	GCATGC	1 cut(s)	1384
Sse9I	AATT	8 cut(s)	235, 280, 649, 801, 946, 1010, 1257, 1504
SspDI	GGCGCC	1 cut(s)	58
SspMI	CTAG	3 cut(s)	1284, 1370, 1793
StyD4I	CCNGG	9 cut(s)	267, 378, 594, 1228, 1273, 1375, 1386, 1387, 1432
StyI	CCWWGG	2 cut(s)	1051, 1113
TaaI	ACNGT	8 cut(s)	470, 498, 582, 826, 976, 1305, 1502, 1610
TaiI	ACGT	7 cut(s)	96, 108, 234, 438, 1210, 1667, 1905
TaqI	TCGA	4 cut(s)	179, 476, 1195, 1827
TasI	AATT	8 cut(s)	235, 280, 649, 801, 946, 1010, 1257, 1504
TatI	WGTACW	1 cut(s)	318
TauI	GCSGC	5 cut(s)	8, 11, 50, 64, 74
TfiI	GAWTC	3 cut(s)	181, 512, 1705
Tru1I	TTAA	4 cut(s)	234, 372, 681, 768
Tru9I	TTAA	4 cut(s)	234, 372, 681, 768
TscAI	CASTG	2 cut(s)	42, 721
TseFI	GTSAC	3 cut(s)	833, 1239, 1777
Tsp45I	GTSAC	3 cut(s)	833, 1239, 1777
TspDTI	ATGAA	4 cut(s)	358, 687, 999, 1387
TspGWI	ACGGA	4 cut(s)	66, 1159, 1555, 1823
TspMI	CCCGGG	1 cut(s)	1387
TspRI	CASTG	2 cut(s)	42, 721
Vha464I	CTTAAG	1 cut(s)	680
VpaK11BI	GGWCC	5 cut(s)	20, 118, 1552, 1583, 1801
XapI	RAATTY	4 cut(s)	280, 649, 1010, 1257
XceI	RCATGY	2 cut(s)	1384, 1478
XcmI	CCANNNNNNNNNTGG	3 cut(s)	602, 1111, 1343
XmaI	CCCGGG	1 cut(s)	1387
XspI	CTAG	3 cut(s)	1284, 1370, 1793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.