Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0012291

Physical Location & Seq

Genomic Coordinates Forward (+)

4522122 .. 4526510

Gene Structure 4389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G043700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGCGGATGCGGTATCGGCACCGGCGGCTCAACCCGTATCCCCGGCGGCGCAACAGCCACCTGTGGCGGCTCCGGCCCCGACTCCGGCGGGTTTCGGCAACGTGTCGTTGTACGTGGGCGATCTGGACCCCACTGTCAACGAAGCGCAGCTGATCGATCTGTTCGGCCAAGTGGGCGGCGTCGTTTCGGTTAGGGTTTGTAGGGATCAAAGCCGAATGCAATCGCTTGGCTACGCCTACGTCAATTATAGCAATACGCAAGAGGCTGCTAATGCACTGGAGATTTTGAATTTCGCTCCTATCAATGGGAAACCCATTAGGATTATGTATTCCCATCGTGATCCAAGTATTCGGAAGAGCGGAAGGGCAAATGTCTTTATCAAGAACCTGGACAAATCTATTGATAACAAGGCATTGCTTGACACTTTTGCTTCCTTTGGCACTGTACTTTCTTGCAAGGTTGCAGTTGATGGCCATGGTCAATCGAAAGGGTATGGTTTCGTACAGTATGACAAGGACGAATCTGCACAGCAAGCAATCAAACGGCTGAATTCAATGCTGATAAATGGTAAACAGGTGTATGTTGGACTGTTTCAAAGAGGCCAGGAAAGGAATCGGCCAAATGGATCACCACATTTCACTAATGTTTATGTGAAAAATTTGTCTGAGACAACTACAGAAGACGACCTCAAGAAACTTTTTGCCGAGCATGGCAACATAACTAGTGCAATTGTTATGAGGGATGCTGCTGGAAAGTCTCGATGTTTTGGTTTTGTTAACTTCGAGAAGCCAGACGCAGCAGCTGCTGCAATTGATAAGTTGAATGGGACCACCTTTAGTGGTGACAAGGTTTTGTTTGTTGGGAGGGCTCAAAGGAAATCAGAGAGGGAGGCGGAGTTGAGAGCTAAGTTTGAACAGGAAAGACTCAGTAGATTTGAGAAGCTACAAGGTGCTAACTTATATCTGAAAAATCTTGATGATACAATAACTGATGAAAAACTAAAGGAGCTATTTTCTGAATTTGGAACAATAACATCATGCAAGGTCATGCTTGATCACCAAGGGACAAGCAAGGGTTCTGGATTTGTTGCCTTCTCTACTCCAGAGGAAGCCAATAAAGCTTTGACTGAAATGAATGGTAAGATGCTTGGACGGAAGCCACTGTACGTTGCTGTAGCCCAACGCAAAGAAGAGAGAAAGGCTCGATTACAGGCACGCTTTGCCCAAATCCGAGCACCAGGTGGAATGACACCATTGCCATCGGGAATTCCTGGATATCATCCTGGGGCACCTAGGCTTGCCCCTCAACAACTTTATTTTGGTCAAGGTACTCCTGGCCTTCTTCCCCCACAGCCTGCAGGTTATGGCTTCCAGCAGCAGCTCTTGCCTGGTATGCGTCCGGGTGTTGCTCCAAACTTTATTATGCCATACCACCTTCAGAGGCAAGGTCAACATGGGCAGCGAATGGGGGTACGGCGAGGTGGGAACTTTCAGCAGGTGCAGCAGCAGCAGCAGCAGCTACTGCACCGTAACTCCAACCAAGGCTTGAGATACATGGGCAACGCACGGAATGGAGTGGATCCATCTGTCACTCCTCAAGGTATTGTGGGTCCAATAATGCCTTTGCCCTTTGACGGTTCAGGGATGCCTGTGACTCCTAATGATAGCCAGCGTTCTGGGCCGTTGCCGATGTCAACACTTGCTTCAGCTTTAGCTTCTGCTACCCCAGAGAATCAGCGCTTGATGCTGGGTGAGCAGCTATATCCACTTGTTGAGCGTATTGAGCCGGAACACACTGCTAAGGTGACTGGGATGTTGCTGGAGATGGACCAAACGGAGGTTCTCCATCTCATCGAGTCTCCGGATGCCTTAAAGGATAAGGTAGCTGAGGCAATGGATGTCCTTCGTAAGGCTGCAACAAAGTCTGAAGTTGCTGATCAGCTTAACTCGTTGGATCTCAACGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0031323 GO:0031329 GO:0034641 GO:0034645 GO:0034655 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1900151 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903311

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

656

Amino Acids

71.48

Weight (kDa)

9.02

Isoelectric Point (pI)

37.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22760 AT1G71770 AT1G71770
fragaria_vesca	FvH4_2g12840
malus_domestica	MD05G1035900.v1.1 MD10G1038000.v1.1
prunus_persica	Prupe.8G043700_v2.0.a1
pyrus_communis	pycom05g02640 pycom10g02600
rosa_chinensis	RchiOBHm_Chr6g0273861
rosa_laevigata	RLG00000013594
rosa_multiflora	Rmu_ssc0000322.1_g000029
rosa_roxburghii	Rroxscaffold_7G00194960
rosa_rugosa	Rorug06G0077500
rosa_samantha	Rh6AG193000 Rh6BG196900 Rh6CG196100 Rh6DG188100
rosa_wichuraiana	Rw6G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1486
AasI	GACNNNNNNGTC	1 cut(s)	134
Acc36I	ACCTGC	2 cut(s)	1349, 1486
AccB1I	GGYRCC	2 cut(s)	19, 1288
AccBSI	CCGCTC	1 cut(s)	360
AccIII	TCCGGA	1 cut(s)	1861
AciI	CCGC	9 cut(s)	5, 11, 26, 47, 68, 89, 177, 360, 893
AclWI	GGATC	6 cut(s)	213, 335, 634, 1574, 1587, 1962
AcoI	YGGCCR	3 cut(s)	166, 472, 617
AcsI	RAATTY	5 cut(s)	289, 550, 658, 1019, 1266
AcuI	CTGAAG	3 cut(s)	1421, 1689, 1947
AcyI	GRCGYC	1 cut(s)	180
AdeI	CACNNNGTG	1 cut(s)	1241
AfaI	GTAC	6 cut(s)	113, 447, 504, 1166, 1330, 1473
AfeI	AGCGCT	1 cut(s)	1739
AfiI	CCNNNNNNNGG	5 cut(s)	85, 305, 1634, 1837, 1909
AflIII	ACRYGT	1 cut(s)	102
AgsI	TTSAA	5 cut(s)	289, 555, 596, 823, 914
AhlI	ACTAGT	1 cut(s)	722
AjnI	CCWGG	7 cut(s)	387, 603, 1237, 1270, 1282, 1333, 1387
AjuI	GAANNNNNNNTTGG	2 cut(s)	1824, 1856
Alw21I	GWGCWC	1 cut(s)	1237
Alw26I	GTCTC	3 cut(s)	662, 762, 1863
AlwI	GGATC	6 cut(s)	213, 335, 634, 1574, 1587, 1962
AlwNI	CAGNNNCTG	3 cut(s)	803, 806, 1522
Aor13HI	TCCGGA	1 cut(s)	1861
Aor51HI	AGCGCT	1 cut(s)	1739
AoxI	GGCC	7 cut(s)	75, 166, 472, 601, 617, 1336, 1679
ApoI	RAATTY	5 cut(s)	289, 550, 658, 1019, 1266
AspA2I	CCTAGG	1 cut(s)	1292
AspLEI	GCGC	3 cut(s)	52, 148, 1740
AspS9I	GGNCC	6 cut(s)	76, 127, 828, 1610, 1679, 1828
AsuC2I	CCSGG	2 cut(s)	44, 1401
AsuHPI	GGTGA	5 cut(s)	621, 854, 1049, 1763, 1816
AvaII	GGWCC	4 cut(s)	127, 828, 1610, 1828
AvrII	CCTAGG	1 cut(s)	1292
BaeGI	GKGCMC	1 cut(s)	1291
BalI	TGGCCA	1 cut(s)	474
BamHI	GGATCC	1 cut(s)	1579
BanI	GGYRCC	2 cut(s)	19, 1288
BanII	GRGCYC	1 cut(s)	871
BarI	GAAGNNNNNNTAC	2 cut(s)	1148, 1180
BbsI	GAAGAC	1 cut(s)	687
Bbv12I	GWGCWC	1 cut(s)	1237
BbvCI	CCTCAGC	1 cut(s)	1887
BccI	CCATC	6 cut(s)	342, 464, 1267, 1591, 1819, 1854
BceAI	ACGGC	3 cut(s)	560, 1490, 1666
BciT130I	CCWGG	7 cut(s)	389, 605, 1239, 1272, 1284, 1335, 1389
BciVI	GTATCC	1 cut(s)	49
BclI	TGATCA	2 cut(s)	1054, 1936
BcnI	CCSGG	2 cut(s)	44, 1401
BcoDI	GTCTC	3 cut(s)	662, 762, 1863
BcuI	ACTAGT	1 cut(s)	722
BfaI	CTAG	2 cut(s)	723, 1293
BfmI	CTRYAG	3 cut(s)	675, 1173, 1356
BfoI	RGCGCY	1 cut(s)	1741
BfuAI	ACCTGC	2 cut(s)	1349, 1486
BfuI	GTATCC	1 cut(s)	49
BglI	GCCNNNNNGGC	1 cut(s)	174
BlnI	CCTAGG	1 cut(s)	1292
Bme1390I	CCNGG	9 cut(s)	44, 389, 605, 1239, 1272, 1284, 1335, 1389, 1401
Bme18I	GGWCC	4 cut(s)	127, 828, 1610, 1828
BmgT120I	GGNCC	6 cut(s)	76, 127, 828, 1610, 1679, 1828
BmiI	GGNNCC	8 cut(s)	21, 72, 78, 129, 829, 1290, 1581, 1611
BmrFI	CCNGG	9 cut(s)	44, 389, 605, 1239, 1272, 1284, 1335, 1389, 1401
BmrI	ACTGGG	1 cut(s)	1818
BmsI	GCATC	5 cut(s)	733, 1134, 1635, 1734, 1855
BmuI	ACTGGG	1 cut(s)	1818
BpiI	GAAGAC	1 cut(s)	687
BplI	GAGNNNNNCTC	2 cut(s)	1186, 1218
BpmI	CTGGAG	3 cut(s)	299, 1086, 1841
Bpu10I	CCTNAGC	2 cut(s)	1800, 1887
BpuEI	CTTGAG	3 cut(s)	674, 1567, 1581
BpuMI	CCSGG	2 cut(s)	44, 1401
Bsa29I	ATCGAT	1 cut(s)	156
BsaAI	YACGTR	1 cut(s)	115
BsaHI	GRCGYC	1 cut(s)	180
BsaJI	CCNNGG	6 cut(s)	42, 475, 1060, 1283, 1292, 1540
BsaWI	WCCGGW	1 cut(s)	1861
BsaXI	ACNNNNNCTCC	4 cut(s)	881, 911, 1517, 1547
Bsc4I	CCNNNNNNNGG	5 cut(s)	85, 305, 1634, 1837, 1909
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	2 cut(s)	282, 1813
Bse3DI	GCAATG	3 cut(s)	413, 1253, 1899
BseAI	TCCGGA	1 cut(s)	1861
BseBI	CCWGG	7 cut(s)	389, 605, 1239, 1272, 1284, 1335, 1389
BseCI	ATCGAT	1 cut(s)	156
BseDI	CCNNGG	6 cut(s)	42, 475, 1060, 1283, 1292, 1540
BseGI	GGATG	7 cut(s)	13, 748, 1279, 1650, 1818, 1870, 1903
BseLI	CCNNNNNNNGG	5 cut(s)	85, 305, 1634, 1837, 1909
BseMI	GCAATG	3 cut(s)	413, 1253, 1899
BseMII	CTCAG	3 cut(s)	657, 940, 1878
BseNI	ACTGG	2 cut(s)	282, 1813
BseRI	GAGGAG	1 cut(s)	1584
BseSI	GKGCMC	1 cut(s)	1291
BseYI	CCCAGC	1 cut(s)	1747
BsgI	GTGCAG	3 cut(s)	510, 1508, 1520
BshFI	GGCC	7 cut(s)	77, 168, 474, 603, 619, 1338, 1681
BshNI	GGYRCC	2 cut(s)	19, 1288
BshVI	ATCGAT	1 cut(s)	156
BsiHKAI	GWGCWC	1 cut(s)	1237
BsiSI	CCGG	7 cut(s)	23, 44, 74, 86, 1400, 1787, 1862
BslFI	GGGAC	2 cut(s)	841, 1078
BslI	CCNNNNNNNGG	5 cut(s)	85, 305, 1634, 1837, 1909
BsmAI	GTCTC	3 cut(s)	662, 762, 1863
BsmFI	GGGAC	2 cut(s)	841, 1078
BsmI	GAATGC	1 cut(s)	222
BsnI	GGCC	7 cut(s)	77, 168, 474, 603, 619, 1338, 1681
Bsp1286I	GDGCHC	3 cut(s)	871, 1237, 1291
Bsp13I	TCCGGA	1 cut(s)	1861
Bsp19I	CCATGG	1 cut(s)	475
BspACI	CCGC	9 cut(s)	5, 11, 26, 47, 68, 89, 177, 360, 893
BspANI	GGCC	7 cut(s)	77, 168, 474, 603, 619, 1338, 1681
BspCNI	CTCAG	3 cut(s)	658, 939, 1879
BspDI	ATCGAT	1 cut(s)	156
BspEI	TCCGGA	1 cut(s)	1861
BspLI	GGNNCC	8 cut(s)	21, 72, 78, 129, 829, 1290, 1581, 1611
BspMAI	CTGCAG	1 cut(s)	1360
BspMI	ACCTGC	2 cut(s)	1349, 1486
BspPI	GGATC	6 cut(s)	213, 335, 634, 1574, 1587, 1962
BspQI	GCTCTTC	1 cut(s)	350
BspT107I	GGYRCC	2 cut(s)	19, 1288
BsrBI	CCGCTC	1 cut(s)	360
BsrDI	GCAATG	3 cut(s)	413, 1253, 1899
BsrFI	RCCGGY	1 cut(s)	22
BsrI	ACTGG	2 cut(s)	282, 1813
BssAI	RCCGGY	1 cut(s)	22
BssECI	CCNNGG	6 cut(s)	42, 475, 1060, 1283, 1292, 1540
BssNI	GRCGYC	1 cut(s)	180
BssT1I	CCWWGG	4 cut(s)	475, 1060, 1292, 1540
Bst2UI	CCWGG	7 cut(s)	389, 605, 1239, 1272, 1284, 1335, 1389
Bst4CI	ACNGT	7 cut(s)	136, 445, 507, 591, 1164, 1529, 1637
Bst6I	CTCTTC	2 cut(s)	350, 1185
BstACI	GRCGYC	1 cut(s)	180
BstAPI	GCANNNNNTGC	5 cut(s)	803, 806, 1220, 1384, 1522
BstBAI	YACGTR	1 cut(s)	115
BstC8I	GCNNGC	5 cut(s)	534, 1216, 1299, 1356, 1670
BstDEI	CTNAG	5 cut(s)	666, 906, 926, 1800, 1887
BstDSI	CCRYGG	1 cut(s)	475
BstENI	CCTNNNNNAGG	1 cut(s)	1907
BstF5I	GGATG	7 cut(s)	13, 748, 1279, 1650, 1818, 1870, 1903
BstH2I	RGCGCY	1 cut(s)	1741
BstHHI	GCGC	3 cut(s)	52, 148, 1740
BstMAI	GTCTC	3 cut(s)	662, 762, 1863
BstNI	CCWGG	7 cut(s)	389, 605, 1239, 1272, 1284, 1335, 1389
BstSCI	CCNGG	9 cut(s)	42, 387, 603, 1237, 1270, 1282, 1333, 1387, 1399
BstSFI	CTRYAG	3 cut(s)	675, 1173, 1356
BstSLI	GKGCMC	1 cut(s)	1291
BstV2I	GAAGAC	1 cut(s)	687
BstX2I	RGATCY	2 cut(s)	1579, 1954
BstXI	CCANNNNNNTGG	1 cut(s)	1676
BstYI	RGATCY	2 cut(s)	1579, 1954
Bsu15I	ATCGAT	1 cut(s)	156
BsuI	GTATCC	1 cut(s)	49
BsuRI	GGCC	7 cut(s)	77, 168, 474, 603, 619, 1338, 1681
BsuTUI	ATCGAT	1 cut(s)	156
BtgI	CCRYGG	1 cut(s)	475
BtsCI	GGATG	7 cut(s)	13, 748, 1279, 1650, 1818, 1870, 1903
BtsI	GCAGTG	1 cut(s)	1794
BtsIMutI	CAGTG	5 cut(s)	132, 275, 441, 1160, 1794
BveI	ACCTGC	2 cut(s)	1349, 1486
Cac8I	GCNNGC	5 cut(s)	534, 1216, 1299, 1356, 1670
CaiI	CAGNNNCTG	3 cut(s)	803, 806, 1522
CfoI	GCGC	3 cut(s)	52, 148, 1740
Cfr10I	RCCGGY	1 cut(s)	22
Cfr13I	GGNCC	6 cut(s)	76, 127, 828, 1610, 1679, 1828
ClaI	ATCGAT	1 cut(s)	156
CseI	GACGC	3 cut(s)	169, 803, 1385
CsiI	ACCWGGT	1 cut(s)	1237
Csp6I	GTAC	6 cut(s)	112, 446, 503, 1165, 1329, 1472
CviAII	CATG	6 cut(s)	476, 710, 1038, 1048, 1454, 1555
CviQI	GTAC	6 cut(s)	112, 446, 503, 1165, 1329, 1472
DdeI	CTNAG	5 cut(s)	666, 906, 926, 1800, 1887
DraIII	CACNNNGTG	1 cut(s)	1241
DrdI	GACNNNNNNGTC	1 cut(s)	134
DseDI	GACNNNNNNGTC	1 cut(s)	134
EaeI	YGGCCR	3 cut(s)	166, 472, 617
Eam1104I	CTCTTC	2 cut(s)	350, 1185
EarI	CTCTTC	2 cut(s)	350, 1185
EciI	GGCGGA	2 cut(s)	20, 908
Eco130I	CCWWGG	4 cut(s)	475, 1060, 1292, 1540
Eco24I	GRGCYC	1 cut(s)	871
Eco32I	GATATC	1 cut(s)	1277
Eco47I	GGWCC	4 cut(s)	127, 828, 1610, 1828
Eco47III	AGCGCT	1 cut(s)	1739
Eco57I	CTGAAG	3 cut(s)	1421, 1689, 1947
EcoNI	CCTNNNNNAGG	1 cut(s)	1907
EcoRI	GAATTC	2 cut(s)	550, 1266
EcoRII	CCWGG	7 cut(s)	387, 603, 1237, 1270, 1282, 1333, 1387
EcoRV	GATATC	1 cut(s)	1277
EcoT14I	CCWWGG	4 cut(s)	475, 1060, 1292, 1540
EcoT38I	GRGCYC	1 cut(s)	871
ErhI	CCWWGG	4 cut(s)	475, 1060, 1292, 1540
FaeI	CATG	6 cut(s)	479, 713, 1041, 1051, 1457, 1558
FaqI	GGGAC	2 cut(s)	841, 1078
FatI	CATG	6 cut(s)	475, 709, 1037, 1047, 1453, 1554
FauI	CCCGC	1 cut(s)	82
FbaI	TGATCA	2 cut(s)	1054, 1936
FokI	GGATG	7 cut(s)	20, 755, 1266, 1657, 1825, 1877, 1910
FriOI	GRGCYC	1 cut(s)	871
FspBI	CTAG	2 cut(s)	723, 1293
GlaI	GCGC	3 cut(s)	51, 147, 1739
GsaI	CCCAGC	1 cut(s)	1751
GsuI	CTGGAG	3 cut(s)	299, 1086, 1841
HaeII	RGCGCY	1 cut(s)	1741
HaeIII	GGCC	7 cut(s)	77, 168, 474, 603, 619, 1338, 1681
HapII	CCGG	7 cut(s)	23, 44, 74, 86, 1400, 1787, 1862
HgaI	GACGC	3 cut(s)	169, 803, 1385
HhaI	GCGC	3 cut(s)	52, 148, 1740
Hin1I	GRCGYC	1 cut(s)	180
Hin1II	CATG	6 cut(s)	479, 713, 1041, 1051, 1457, 1558
Hin6I	GCGC	3 cut(s)	50, 146, 1738
HinP1I	GCGC	3 cut(s)	50, 146, 1738
HincII	GTYRAC	4 cut(s)	139, 778, 1451, 1695
HindII	GTYRAC	4 cut(s)	139, 778, 1451, 1695
HindIII	AAGCTT	1 cut(s)	1119
HinfI	GANTC	7 cut(s)	82, 521, 613, 924, 1654, 1732, 1856
HpaI	GTTAAC	1 cut(s)	778
HpaII	CCGG	7 cut(s)	23, 44, 74, 86, 1400, 1787, 1862
HphI	GGTGA	5 cut(s)	621, 854, 1049, 1763, 1816
Hpy166II	GTNNAC	5 cut(s)	139, 572, 778, 1451, 1695
Hpy188I	TCNGA	8 cut(s)	354, 667, 883, 966, 1018, 1232, 1440, 1927
Hpy8I	GTNNAC	5 cut(s)	139, 572, 778, 1451, 1695
Hpy99I	CGWCG	1 cut(s)	185
HpyAV	CCTTC	5 cut(s)	357, 1102, 1349, 1445, 1913
HpyCH4III	ACNGT	7 cut(s)	136, 445, 507, 591, 1164, 1529, 1637
HpyCH4IV	ACGT	4 cut(s)	102, 114, 240, 1167
HpyF3I	CTNAG	5 cut(s)	666, 906, 926, 1800, 1887
HpySE526I	ACGT	4 cut(s)	102, 114, 240, 1167
Hsp92I	GRCGYC	1 cut(s)	180
Hsp92II	CATG	6 cut(s)	479, 713, 1041, 1051, 1457, 1558
HspAI	GCGC	3 cut(s)	50, 146, 1738
Kpn2I	TCCGGA	1 cut(s)	1861
Ksp22I	TGATCA	2 cut(s)	1054, 1936
KspAI	GTTAAC	1 cut(s)	778
LguI	GCTCTTC	1 cut(s)	350
LmnI	GCTCC	4 cut(s)	76, 301, 1006, 1414
LweI	GCATC	5 cut(s)	733, 1134, 1635, 1734, 1855
MabI	ACCWGGT	1 cut(s)	1237
MaeI	CTAG	2 cut(s)	723, 1293
MaeII	ACGT	4 cut(s)	102, 114, 240, 1167
MaeIII	GTNAC	5 cut(s)	842, 1529, 1588, 1651, 1804
MbiI	CCGCTC	1 cut(s)	360
MboII	GAAGA	4 cut(s)	367, 692, 1202, 1334
MfeI	CAATTG	2 cut(s)	729, 810
MflI	RGATCY	2 cut(s)	1579, 1954
MhlI	GDGCHC	3 cut(s)	871, 1237, 1291
MlsI	TGGCCA	1 cut(s)	474
MluCI	AATT	8 cut(s)	244, 289, 550, 658, 729, 810, 1019, 1266
MluNI	TGGCCA	1 cut(s)	474
MlyI	GAGTC	4 cut(s)	76, 918, 1648, 1865
MmeI	TCCRAC	3 cut(s)	565, 1560, 1932
Mox20I	TGGCCA	1 cut(s)	474
MroI	TCCGGA	1 cut(s)	1861
MscI	TGGCCA	1 cut(s)	474
MseI	TTAA	3 cut(s)	777, 1871, 1944
Msp20I	TGGCCA	1 cut(s)	474
MspA1I	CMGCKG	2 cut(s)	151, 803
MspI	CCGG	7 cut(s)	23, 44, 74, 86, 1400, 1787, 1862
MspR9I	CCNGG	9 cut(s)	44, 389, 605, 1239, 1272, 1284, 1335, 1389, 1401
MunI	CAATTG	2 cut(s)	729, 810
Mva1269I	GAATGC	1 cut(s)	222
MvaI	CCWGG	7 cut(s)	389, 605, 1239, 1272, 1284, 1335, 1389
NciI	CCSGG	2 cut(s)	44, 1401
NcoI	CCATGG	1 cut(s)	475
NlaIII	CATG	6 cut(s)	479, 713, 1041, 1051, 1457, 1558
NlaIV	GGNNCC	8 cut(s)	21, 72, 78, 129, 829, 1290, 1581, 1611
NmeAIII	GCCGAG	1 cut(s)	730
NmuCI	GTSAC	4 cut(s)	842, 1588, 1651, 1804
PaqCI	CACCTGC	1 cut(s)	1486
PciSI	GCTCTTC	1 cut(s)	350
PctI	GAATGC	1 cut(s)	222
PfeI	GAWTC	3 cut(s)	521, 613, 1732
PfoI	TCCNGGA	1 cut(s)	1270
PleI	GAGTC	4 cut(s)	76, 918, 1648, 1864
PpsI	GAGTC	4 cut(s)	76, 918, 1648, 1864
Ppu21I	YACGTR	1 cut(s)	115
Psp6I	CCWGG	7 cut(s)	387, 603, 1237, 1270, 1282, 1333, 1387
PspFI	CCCAGC	1 cut(s)	1747
PspGI	CCWGG	7 cut(s)	387, 603, 1237, 1270, 1282, 1333, 1387
PspN4I	GGNNCC	8 cut(s)	21, 72, 78, 129, 829, 1290, 1581, 1611
PspPI	GGNCC	6 cut(s)	76, 127, 828, 1610, 1679, 1828
PstI	CTGCAG	1 cut(s)	1360
PstNI	CAGNNNCTG	3 cut(s)	803, 806, 1522
PsuI	RGATCY	2 cut(s)	1579, 1954
PvuII	CAGCTG	2 cut(s)	151, 803
RsaI	GTAC	6 cut(s)	113, 447, 504, 1166, 1330, 1473
RsaNI	GTAC	6 cut(s)	112, 446, 503, 1165, 1329, 1472
SapI	GCTCTTC	1 cut(s)	350
SaqAI	TTAA	3 cut(s)	777, 1871, 1944
Sau96I	GGNCC	6 cut(s)	76, 127, 828, 1610, 1679, 1828
SbfI	CCTGCAGG	1 cut(s)	1360
SchI	GAGTC	4 cut(s)	76, 918, 1648, 1865
ScrFI	CCNGG	9 cut(s)	44, 389, 605, 1239, 1272, 1284, 1335, 1389, 1401
SdaI	CCTGCAGG	1 cut(s)	1360
SduI	GDGCHC	3 cut(s)	871, 1237, 1291
SexAI	ACCWGGT	1 cut(s)	1237
SfaNI	GCATC	5 cut(s)	733, 1134, 1635, 1734, 1855
SfcI	CTRYAG	3 cut(s)	675, 1173, 1356
SgrAI	CRCCGGYG	1 cut(s)	22
SinI	GGWCC	4 cut(s)	127, 828, 1610, 1828
SmlI	CTYRAG	3 cut(s)	689, 1546, 1596
SmoI	CTYRAG	3 cut(s)	689, 1546, 1596
SpeI	ACTAGT	1 cut(s)	722
Sse8387I	CCTGCAGG	1 cut(s)	1360
Sse9I	AATT	8 cut(s)	244, 289, 550, 658, 729, 810, 1019, 1266
SsiI	CCGC	9 cut(s)	5, 11, 26, 47, 68, 89, 177, 360, 893
SspMI	CTAG	2 cut(s)	723, 1293
StyD4I	CCNGG	9 cut(s)	42, 387, 603, 1237, 1270, 1282, 1333, 1387, 1399
StyI	CCWWGG	4 cut(s)	475, 1060, 1292, 1540
TaaI	ACNGT	7 cut(s)	136, 445, 507, 591, 1164, 1529, 1637
TaiI	ACGT	4 cut(s)	105, 117, 243, 1170
TaqI	TCGA	6 cut(s)	156, 485, 760, 783, 1204, 1854
TasI	AATT	8 cut(s)	244, 289, 550, 658, 729, 810, 1019, 1266
TatI	WGTACW	1 cut(s)	445
TauI	GCSGC	4 cut(s)	29, 50, 71, 180
TfiI	GAWTC	3 cut(s)	521, 613, 1732
Tru1I	TTAA	3 cut(s)	777, 1871, 1944
Tru9I	TTAA	3 cut(s)	777, 1871, 1944
TscAI	CASTG	5 cut(s)	139, 282, 448, 1167, 1801
TseFI	GTSAC	4 cut(s)	842, 1588, 1651, 1804
Tsp45I	GTSAC	4 cut(s)	842, 1588, 1651, 1804
TspDTI	ATGAA	2 cut(s)	1008, 1148
TspGWI	ACGGA	3 cut(s)	1168, 1582, 1850
TspRI	CASTG	5 cut(s)	139, 282, 448, 1167, 1801
VpaK11BI	GGWCC	4 cut(s)	127, 828, 1610, 1828
XagI	CCTNNNNNAGG	1 cut(s)	1907
XapI	RAATTY	5 cut(s)	289, 550, 658, 1019, 1266
XmaJI	CCTAGG	1 cut(s)	1292
XspI	CTAG	2 cut(s)	723, 1293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.