Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0012291

Physical Location & Seq

Genomic Coordinates Forward (+)

11286495 .. 11290992

Gene Structure 4498 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g12840.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGGCGGCGGCTGTGGTGTCGTCTCAGGTGGCTCAACCCGCTGCTCCGGTGGCCCAACAGGCTCCGGCTCCGGCGGGGTTCGGGAATGTGTCGCTATACGTGGGAGATCTGGACCCGAGTGTGAACGAAGAGCAGCTTTACTATCTGTTCAACCAAGTGGCTCAGGTTGCTTCCCTTCGGGTTTGTAGGGATCAGACCAGAATGCACTCGCTTGGCTATGCTTATGTCAATTACGCCACTCCACAGGATGCTGCTAATGCCAAGGAGCTCTTAAATTTTGCTCCTATAAATGGGAAACCCATTAGGATCATGTACTCGCAGCGTGATCCCAGCATTCGGAAGAGTGGATATGCAAATTTATTTATCAACAACCTGGAGAAATCTATTGATAATAAGGCATTGTTGGACACTTTTTCTGCTTTTGGGACTGTACTCTCTTGCAAGGTCGCAGCTGATGCCAATGGTCAATCAAAAGGATATGGATTCGTACAGTATGATAATGAGGAATCTGCAAACAATGCAATCAACCAGCTGAATGGCATGCTCATAAACGAGAAAAAGGTTTCTGTTGGACATCATGTTCGGAAGTCATCAAATGAATTCAAAAATATATATGTCAAAAATTTGCCGGAGACAATTACAGAGGAAGACCTCCAGAATTATTTTGGTGAATCTGGACCTATCACTAGTGCAGCGGTTATGAGGGATGCACATGGAAAGTCTAGATGCTTTGGTTTTGTCAACTTTGATAAAGCTGGTGATGCTATAACTGCAATTGAGAAATTCAATGGGAAACCTTATAAAGATAAGGTTTTGTTTGTCGGTAAGGCTCAAAAGAAAGTAGACAGGGAGAAAGAGTTAAGAGCCAAGTTTGAACAGGAAAGAATCAGCAGATTTGAGAAGCTCCAAGGGGCAAACCTATATCTGAAAAATCTTGATGACACCGTAAATGATGACAAACTGAAGGAGCTATTTTCAGAATTCGGAACAATAACTTCATGCAAGGTCATGCTTGATCATCAAGGGATGAGCAAGGGATCTGGATTTGTTGCCTTTTCAAGTCCGGAGGAAGCTAACAAAGCTTTGAATGAAATGAATGGGAAGATGATTGGTCGGAAGCCTCTATACGTTGCTGTGGCTCAGCGGAAAGAAGAAAGGAAGGCTCGACTGCAGGCACGTTTTGCACAAATCCGAGCACCAGGTGCGATGATACATTTGCCATCGCCAATTCCTGGATATTATCCTGGGGCACCTAGGCTTTCACCTCAGCAGCTGTATTATGGTCAAGGTACTCCGGGCCTTCTACCCCATCAGCCTGCAGGTTATGGCTTCCAGCAGCAAATCTTGCCCGGGATGCGTCCAGGTGTTGCTCCCAACTTCATTATGCCGTACCACCTTCAACGGCAAGGTCAACCTGGGCAGAGAATAGGTGTACGGCGAGGGGGAAACTTCCAACAAGTGCAGCAGCAGCAGCAGTTAATGCATCGTAACTCCAATCAAGGCTCGAGATACATAGGTCATGCTCGGAACGGGGTGGACTCTGCTGTGTCTCCCCAAGGTCTTGTGAGTCCAGTGATGCCTTTGCCCTTTGATGGTTCGGGGATGCCTGCTGTGACATCAAGTGATATCCAGCGTACTGGGCCAATGCCTATGTCAACACTTGCTTCTGCTTTAGCTTCTGCTACTCCCGAGAATCAGCGTTTGATGCTGGGAGAGCAGCTATATCCTCTTGTTGAGCGTATTGAGCCAGAACTCACAGCTAAGGTGACTGGGATGTTGCTGGAAATGGACCAGACAGAAGTTCTCCATCTTATTGAGTCTCCAGATGCACTCAAGGATAAGGTAGCTGAAGCAATGGATGTGCTTCGTAATGCTACATCAAAGACTGATGTCGCGGATCAGCTTGGTGCATTGGATCTGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0031323 GO:0031329 GO:0034641 GO:0034645 GO:0034655 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1900151 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903311

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

642

Amino Acids

70.38

Weight (kDa)

8.78

Isoelectric Point (pI)

44.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	32 - 102	7.7e-15	RNA recognition motif
RRM_1	PF00076	120 - 188	4.4e-20	RNA recognition motif
RRM_1	PF00076	204 - 272	4.2e-20	RNA recognition motif
RRM_1	PF00076	307 - 375	6.5e-21	RNA recognition motif
MLLE	PF00658	557 - 622	1.2e-28	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22760 AT1G71770 AT1G71770
fragaria_vesca	FvH4_2g12840
malus_domestica	MD05G1035900.v1.1 MD10G1038000.v1.1
prunus_persica	Prupe.8G043700_v2.0.a1
pyrus_communis	pycom05g02640 pycom10g02600
rosa_chinensis	RchiOBHm_Chr6g0273861
rosa_laevigata	RLG00000013594
rosa_multiflora	Rmu_ssc0000322.1_g000029
rosa_roxburghii	Rroxscaffold_7G00194960
rosa_rugosa	Rorug06G0077500
rosa_samantha	Rh6AG193000 Rh6BG196900 Rh6CG196100 Rh6DG188100
rosa_wichuraiana	Rw6G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	801
Acc36I	ACCTGC	1 cut(s)	1310
AccB1I	GGYRCC	1 cut(s)	1249
AccB7I	CCANNNNNTGG	1 cut(s)	1232
AccI	GTMKAC	1 cut(s)	843
AccII	CGCG	1 cut(s)	1895
AccIII	TCCGGA	1 cut(s)	1063
AciI	CCGC	7 cut(s)	5, 8, 39, 74, 695, 1144, 1895
AclWI	GGATC	6 cut(s)	198, 314, 320, 1045, 1905, 1923
AcsI	RAATTY	6 cut(s)	274, 355, 599, 622, 782, 980
AcuI	CTGAAG	2 cut(s)	983, 1869
AdeI	CACNNNGTG	1 cut(s)	1202
AfaI	GTAC	7 cut(s)	314, 432, 489, 1291, 1391, 1434, 1636
AfiI	CCNNNNNNNGG	4 cut(s)	290, 336, 1232, 1592
AgsI	TTSAA	7 cut(s)	151, 604, 787, 875, 1059, 1087, 1400
AhlI	ACTAGT	1 cut(s)	686
AjnI	CCWGG	6 cut(s)	372, 1198, 1231, 1243, 1360, 1414
AloI	GAACNNNNNNTCC	2 cut(s)	564, 596
Alw21I	GWGCWC	2 cut(s)	270, 1198
Alw26I	GTCTC	4 cut(s)	27, 626, 1554, 1824
AlwI	GGATC	6 cut(s)	198, 314, 320, 1045, 1905, 1923
AlwNI	CAGNNNCTG	1 cut(s)	1273
Ama87I	CYCGRG	4 cut(s)	115, 1349, 1504, 1688
Aor13HI	TCCGGA	1 cut(s)	1063
AoxI	GGCC	3 cut(s)	51, 1297, 1640
ApoI	RAATTY	6 cut(s)	274, 355, 599, 622, 782, 980
ArsI	GACNNNNNNTTYG	2 cut(s)	564, 596
AspA2I	CCTAGG	1 cut(s)	1253
AspS9I	GGNCC	6 cut(s)	52, 112, 677, 1297, 1640, 1789
AsuC2I	CCSGG	3 cut(s)	1296, 1350, 1351
AsuHPI	GGTGA	4 cut(s)	680, 770, 1254, 1777
AvaI	CYCGRG	4 cut(s)	115, 1349, 1504, 1688
AvaII	GGWCC	3 cut(s)	112, 677, 1789
AvrII	CCTAGG	1 cut(s)	1253
BaeGI	GKGCMC	1 cut(s)	1252
BaeI	ACNNNNGTAYC	2 cut(s)	1501, 1534
BanI	GGYRCC	1 cut(s)	1249
BanII	GRGCYC	1 cut(s)	270
BarI	GAAGNNNNNNTAC	2 cut(s)	1109, 1141
BbsI	GAAGAC	1 cut(s)	654
Bbv12I	GWGCWC	2 cut(s)	270, 1198
BbvCI	CCTCAGC	1 cut(s)	1266
BccI	CCATC	4 cut(s)	1228, 1317, 1586, 1815
BceAI	ACGGC	3 cut(s)	1372, 1418, 1451
BciT130I	CCWGG	6 cut(s)	374, 1200, 1233, 1245, 1362, 1416
BclI	TGATCA	1 cut(s)	1015
BcnI	CCSGG	3 cut(s)	1296, 1350, 1351
BcoDI	GTCTC	4 cut(s)	27, 626, 1554, 1824
BcuI	ACTAGT	1 cut(s)	686
BfaI	CTAG	3 cut(s)	687, 723, 1254
BfmI	CTRYAG	2 cut(s)	1169, 1317
BfuAI	ACCTGC	1 cut(s)	1310
BglI	GCCNNNNNGGC	1 cut(s)	59
BglII	AGATCT	1 cut(s)	106
BlnI	CCTAGG	1 cut(s)	1253
BlpI	GCTNAGC	1 cut(s)	1140
Bme1390I	CCNGG	9 cut(s)	374, 1200, 1233, 1245, 1296, 1350, 1351, 1362, 1416
Bme18I	GGWCC	3 cut(s)	112, 677, 1789
BmeT110I	CYCGRG	4 cut(s)	115, 1349, 1504, 1688
BmgT120I	GGNCC	6 cut(s)	52, 112, 677, 1297, 1640, 1789
BmiI	GGNNCC	4 cut(s)	63, 69, 114, 1251
BmrFI	CCNGG	9 cut(s)	374, 1200, 1233, 1245, 1296, 1350, 1351, 1362, 1416
BmrI	ACTGGG	2 cut(s)	1647, 1779
BmuI	ACTGGG	2 cut(s)	1647, 1779
BoxI	GACNNNNGTC	1 cut(s)	1889
BpiI	GAAGAC	1 cut(s)	654
BpmI	CTGGAG	3 cut(s)	395, 638, 1806
Bpu10I	CCTNAGC	3 cut(s)	162, 1266, 1761
Bpu1102I	GCTNAGC	1 cut(s)	1140
BpuEI	CTTGAG	1 cut(s)	1817
BpuMI	CCSGG	3 cut(s)	1296, 1350, 1351
BsaAI	YACGTR	1 cut(s)	100
BsaJI	CCNNGG	7 cut(s)	261, 907, 1244, 1253, 1349, 1415, 1555
BsaWI	WCCGGW	2 cut(s)	46, 1063
BsaXI	ACNNNNNCTCC	2 cut(s)	842, 872
Bsc4I	CCNNNNNNNGG	4 cut(s)	290, 336, 1232, 1592
Bse1I	ACTGG	3 cut(s)	1571, 1642, 1774
Bse3DI	GCAATG	1 cut(s)	1860
BseAI	TCCGGA	1 cut(s)	1063
BseBI	CCWGG	6 cut(s)	374, 1200, 1233, 1245, 1362, 1416
BseDI	CCNNGG	7 cut(s)	261, 907, 1244, 1253, 1349, 1415, 1555
BseGI	GGATG	7 cut(s)	253, 712, 1032, 1359, 1608, 1779, 1864
BseLI	CCNNNNNNNGG	4 cut(s)	290, 336, 1232, 1592
BseMI	GCAATG	1 cut(s)	1860
BseMII	CTCAG	4 cut(s)	38, 176, 1154, 1280
BseNI	ACTGG	3 cut(s)	1571, 1642, 1774
BseSI	GKGCMC	1 cut(s)	1252
BseYI	CCCAGC	2 cut(s)	329, 1708
BsgI	GTGCAG	2 cut(s)	711, 1481
Bsh1236I	CGCG	1 cut(s)	1895
BshFI	GGCC	3 cut(s)	53, 1299, 1642
BshNI	GGYRCC	1 cut(s)	1249
BsiHKAI	GWGCWC	2 cut(s)	270, 1198
BsiHKCI	CYCGRG	4 cut(s)	115, 1349, 1504, 1688
BsiSI	CCGG	7 cut(s)	47, 65, 71, 629, 1064, 1295, 1350
BslFI	GGGAC	1 cut(s)	439
BslI	CCNNNNNNNGG	4 cut(s)	290, 336, 1232, 1592
BsmAI	GTCTC	4 cut(s)	27, 626, 1554, 1824
BsmBI	CGTCTC	1 cut(s)	27
BsmFI	GGGAC	1 cut(s)	439
BsmI	GAATGC	2 cut(s)	207, 333
BsnI	GGCC	3 cut(s)	53, 1299, 1642
BsoBI	CYCGRG	4 cut(s)	115, 1349, 1504, 1688
Bsp1286I	GDGCHC	3 cut(s)	270, 1198, 1252
Bsp13I	TCCGGA	1 cut(s)	1063
Bsp143I	GATC	8 cut(s)	106, 190, 306, 325, 1015, 1037, 1897, 1915
Bsp1720I	GCTNAGC	1 cut(s)	1140
BspACI	CCGC	7 cut(s)	5, 8, 39, 74, 695, 1144, 1895
BspANI	GGCC	3 cut(s)	53, 1299, 1642
BspCNI	CTCAG	4 cut(s)	37, 175, 1153, 1279
BspEI	TCCGGA	1 cut(s)	1063
BspFNI	CGCG	1 cut(s)	1895
BspLI	GGNNCC	4 cut(s)	63, 69, 114, 1251
BspMAI	CTGCAG	2 cut(s)	1173, 1321
BspMI	ACCTGC	1 cut(s)	1310
BspPI	GGATC	6 cut(s)	198, 314, 320, 1045, 1905, 1923
BspQI	GCTCTTC	1 cut(s)	123
BspT107I	GGYRCC	1 cut(s)	1249
BsrDI	GCAATG	1 cut(s)	1860
BsrI	ACTGG	3 cut(s)	1571, 1642, 1774
BssECI	CCNNGG	7 cut(s)	261, 907, 1244, 1253, 1349, 1415, 1555
BssMI	GATC	8 cut(s)	106, 190, 306, 325, 1015, 1037, 1897, 1915
BssT1I	CCWWGG	4 cut(s)	261, 907, 1253, 1555
Bst2UI	CCWGG	6 cut(s)	374, 1200, 1233, 1245, 1362, 1416
Bst4CI	ACNGT	3 cut(s)	430, 492, 946
Bst6I	CTCTTC	2 cut(s)	123, 335
BstAPI	GCANNNNNTGC	6 cut(s)	455, 518, 1181, 1202, 1345, 1480
BstBAI	YACGTR	1 cut(s)	100
BstC8I	GCNNGC	4 cut(s)	542, 1173, 1317, 1608
BstDEI	CTNAG	5 cut(s)	24, 162, 1140, 1266, 1761
BstF5I	GGATG	7 cut(s)	253, 712, 1032, 1359, 1608, 1779, 1864
BstFNI	CGCG	1 cut(s)	1895
BstKTI	GATC	8 cut(s)	109, 193, 309, 328, 1018, 1040, 1900, 1918
BstMAI	GTCTC	4 cut(s)	27, 626, 1554, 1824
BstMBI	GATC	8 cut(s)	106, 190, 306, 325, 1015, 1037, 1897, 1915
BstNI	CCWGG	6 cut(s)	374, 1200, 1233, 1245, 1362, 1416
BstNSI	RCATGY	1 cut(s)	544
BstPAI	GACNNNNGTC	1 cut(s)	1889
BstSCI	CCNGG	9 cut(s)	372, 1198, 1231, 1243, 1294, 1348, 1349, 1360, 1414
BstSFI	CTRYAG	2 cut(s)	1169, 1317
BstSLI	GKGCMC	1 cut(s)	1252
BstUI	CGCG	1 cut(s)	1895
BstV2I	GAAGAC	1 cut(s)	654
BstX2I	RGATCY	3 cut(s)	106, 1037, 1915
BstXI	CCANNNNNNTGG	2 cut(s)	536, 1637
BstYI	RGATCY	3 cut(s)	106, 1037, 1915
BsuRI	GGCC	3 cut(s)	53, 1299, 1642
BtgZI	GCGATG	2 cut(s)	1206, 1220
BtsCI	GGATG	7 cut(s)	253, 712, 1032, 1359, 1608, 1779, 1864
BtsIMutI	CAGTG	1 cut(s)	1578
BveI	ACCTGC	1 cut(s)	1310
Cac8I	GCNNGC	4 cut(s)	542, 1173, 1317, 1608
CaiI	CAGNNNCTG	1 cut(s)	1273
Cfr13I	GGNCC	6 cut(s)	52, 112, 677, 1297, 1640, 1789
Cfr9I	CCCGGG	1 cut(s)	1349
CseI	GACGC	1 cut(s)	1346
CsiI	ACCWGGT	1 cut(s)	1198
Csp6I	GTAC	7 cut(s)	313, 431, 488, 1290, 1390, 1433, 1635
CviAII	CATG	7 cut(s)	310, 541, 578, 713, 999, 1009, 1520
CviQI	GTAC	7 cut(s)	313, 431, 488, 1290, 1390, 1433, 1635
DdeI	CTNAG	5 cut(s)	24, 162, 1140, 1266, 1761
DpnI	GATC	8 cut(s)	108, 192, 308, 327, 1017, 1039, 1899, 1917
DpnII	GATC	8 cut(s)	106, 190, 306, 325, 1015, 1037, 1897, 1915
DraIII	CACNNNGTG	1 cut(s)	1202
Eam1104I	CTCTTC	2 cut(s)	123, 335
EarI	CTCTTC	2 cut(s)	123, 335
Ecl136II	GAGCTC	1 cut(s)	268
Eco130I	CCWWGG	4 cut(s)	261, 907, 1253, 1555
Eco24I	GRGCYC	1 cut(s)	270
Eco32I	GATATC	1 cut(s)	1627
Eco47I	GGWCC	3 cut(s)	112, 677, 1789
Eco53kI	GAGCTC	1 cut(s)	268
Eco57I	CTGAAG	2 cut(s)	983, 1869
Eco88I	CYCGRG	4 cut(s)	115, 1349, 1504, 1688
EcoICRI	GAGCTC	1 cut(s)	268
EcoRI	GAATTC	2 cut(s)	599, 980
EcoRII	CCWGG	6 cut(s)	372, 1198, 1231, 1243, 1360, 1414
EcoRV	GATATC	1 cut(s)	1627
EcoT14I	CCWWGG	4 cut(s)	261, 907, 1253, 1555
EcoT22I	ATGCAT	1 cut(s)	1485
EcoT38I	GRGCYC	1 cut(s)	270
ErhI	CCWWGG	4 cut(s)	261, 907, 1253, 1555
Esp3I	CGTCTC	1 cut(s)	27
FaeI	CATG	7 cut(s)	313, 544, 581, 716, 1002, 1012, 1523
FalI	AAGNNNNNCTT	4 cut(s)	120, 152, 254, 286
FaqI	GGGAC	1 cut(s)	439
FatI	CATG	7 cut(s)	309, 540, 577, 712, 998, 1008, 1519
FauI	CCCGC	2 cut(s)	46, 67
FbaI	TGATCA	1 cut(s)	1015
FblI	GTMKAC	1 cut(s)	843
FokI	GGATG	7 cut(s)	260, 719, 1039, 1366, 1615, 1786, 1871
FriOI	GRGCYC	1 cut(s)	270
FspBI	CTAG	3 cut(s)	687, 723, 1254
GsaI	CCCAGC	2 cut(s)	333, 1712
GsuI	CTGGAG	3 cut(s)	395, 638, 1806
HaeIII	GGCC	3 cut(s)	53, 1299, 1642
HapII	CCGG	7 cut(s)	47, 65, 71, 629, 1064, 1295, 1350
HgaI	GACGC	1 cut(s)	1346
Hin1II	CATG	7 cut(s)	313, 544, 581, 716, 1002, 1012, 1523
HincII	GTYRAC	3 cut(s)	742, 1412, 1656
HindII	GTYRAC	3 cut(s)	742, 1412, 1656
HindIII	AAGCTT	1 cut(s)	1080
HinfI	GANTC	8 cut(s)	483, 506, 671, 885, 1538, 1567, 1693, 1817
HpaII	CCGG	7 cut(s)	47, 65, 71, 629, 1064, 1295, 1350
HphI	GGTGA	4 cut(s)	680, 770, 1254, 1777
Hpy166II	GTNNAC	7 cut(s)	124, 742, 844, 1412, 1433, 1537, 1656
Hpy8I	GTNNAC	7 cut(s)	124, 742, 844, 1412, 1433, 1537, 1656
HpyAV	CCTTC	5 cut(s)	185, 958, 1153, 1310, 1406
HpyCH4III	ACNGT	3 cut(s)	430, 492, 946
HpyCH4IV	ACGT	3 cut(s)	99, 1128, 1177
HpyF3I	CTNAG	5 cut(s)	24, 162, 1140, 1266, 1761
HpySE526I	ACGT	3 cut(s)	99, 1128, 1177
Hsp92II	CATG	7 cut(s)	313, 544, 581, 716, 1002, 1012, 1523
Kpn2I	TCCGGA	1 cut(s)	1063
Ksp22I	TGATCA	1 cut(s)	1015
Kzo9I	GATC	8 cut(s)	106, 190, 306, 325, 1015, 1037, 1897, 1915
LguI	GCTCTTC	1 cut(s)	123
LmnI	GCTCC	8 cut(s)	49, 67, 73, 265, 286, 909, 967, 1375
MabI	ACCWGGT	1 cut(s)	1198
MaeI	CTAG	3 cut(s)	687, 723, 1254
MaeII	ACGT	3 cut(s)	99, 1128, 1177
MaeIII	GTNAC	3 cut(s)	1487, 1612, 1765
MalI	GATC	8 cut(s)	108, 192, 308, 327, 1017, 1039, 1899, 1917
MboI	GATC	8 cut(s)	106, 190, 306, 325, 1015, 1037, 1897, 1915
MboII	GAAGA	5 cut(s)	140, 352, 659, 1114, 1163
MfeI	CAATTG	1 cut(s)	774
MflI	RGATCY	3 cut(s)	106, 1037, 1915
MhlI	GDGCHC	3 cut(s)	270, 1198, 1252
MlyI	GAGTC	3 cut(s)	1532, 1576, 1826
MmeI	TCCRAC	4 cut(s)	384, 550, 1094, 1477
MnlI	CCTC	9 cut(s)	496, 637, 662, 696, 1060, 1131, 1275, 1433, 1737
Mph1103I	ATGCAT	1 cut(s)	1485
MroI	TCCGGA	1 cut(s)	1063
MseI	TTAA	3 cut(s)	272, 860, 1478
MspA1I	CMGCKG	6 cut(s)	41, 452, 532, 695, 1144, 1273
MspI	CCGG	7 cut(s)	47, 65, 71, 629, 1064, 1295, 1350
MspR9I	CCNGG	9 cut(s)	374, 1200, 1233, 1245, 1296, 1350, 1351, 1362, 1416
MunI	CAATTG	1 cut(s)	774
Mva1269I	GAATGC	2 cut(s)	207, 333
MvaI	CCWGG	6 cut(s)	374, 1200, 1233, 1245, 1362, 1416
MvnI	CGCG	1 cut(s)	1895
NciI	CCSGG	3 cut(s)	1296, 1350, 1351
NdeII	GATC	8 cut(s)	106, 190, 306, 325, 1015, 1037, 1897, 1915
NlaIII	CATG	7 cut(s)	313, 544, 581, 716, 1002, 1012, 1523
NlaIV	GGNNCC	4 cut(s)	63, 69, 114, 1251
NmuCI	GTSAC	2 cut(s)	1612, 1765
NsiI	ATGCAT	1 cut(s)	1485
NspI	RCATGY	1 cut(s)	544
PaeI	GCATGC	1 cut(s)	544
PaeR7I	CTCGAG	1 cut(s)	1504
PciSI	GCTCTTC	1 cut(s)	123
PctI	GAATGC	2 cut(s)	207, 333
PfeI	GAWTC	5 cut(s)	483, 506, 671, 885, 1693
PflMI	CCANNNNNTGG	1 cut(s)	1232
PfoI	TCCNGGA	1 cut(s)	1231
PleI	GAGTC	3 cut(s)	1532, 1575, 1825
PpsI	GAGTC	3 cut(s)	1532, 1575, 1825
Ppu21I	YACGTR	1 cut(s)	100
PshAI	GACNNNNGTC	1 cut(s)	1889
PsiI	TTATAA	1 cut(s)	801
Psp124BI	GAGCTC	1 cut(s)	270
Psp6I	CCWGG	6 cut(s)	372, 1198, 1231, 1243, 1360, 1414
PspFI	CCCAGC	2 cut(s)	329, 1708
PspGI	CCWGG	6 cut(s)	372, 1198, 1231, 1243, 1360, 1414
PspN4I	GGNNCC	4 cut(s)	63, 69, 114, 1251
PspPI	GGNCC	6 cut(s)	52, 112, 677, 1297, 1640, 1789
PstI	CTGCAG	2 cut(s)	1173, 1321
PstNI	CAGNNNCTG	1 cut(s)	1273
PsuI	RGATCY	3 cut(s)	106, 1037, 1915
PvuII	CAGCTG	3 cut(s)	452, 532, 1273
RsaI	GTAC	7 cut(s)	314, 432, 489, 1291, 1391, 1434, 1636
RsaNI	GTAC	7 cut(s)	313, 431, 488, 1290, 1390, 1433, 1635
SacI	GAGCTC	1 cut(s)	270
SapI	GCTCTTC	1 cut(s)	123
SaqAI	TTAA	3 cut(s)	272, 860, 1478
Sau3AI	GATC	8 cut(s)	106, 190, 306, 325, 1015, 1037, 1897, 1915
Sau96I	GGNCC	6 cut(s)	52, 112, 677, 1297, 1640, 1789
SbfI	CCTGCAGG	1 cut(s)	1321
SchI	GAGTC	3 cut(s)	1532, 1576, 1826
ScrFI	CCNGG	9 cut(s)	374, 1200, 1233, 1245, 1296, 1350, 1351, 1362, 1416
SdaI	CCTGCAGG	1 cut(s)	1321
SduI	GDGCHC	3 cut(s)	270, 1198, 1252
SexAI	ACCWGGT	1 cut(s)	1198
SfcI	CTRYAG	2 cut(s)	1169, 1317
Sfr274I	CTCGAG	1 cut(s)	1504
SinI	GGWCC	3 cut(s)	112, 677, 1789
SlaI	CTCGAG	1 cut(s)	1504
SmaI	CCCGGG	1 cut(s)	1351
SmlI	CTYRAG	2 cut(s)	1504, 1832
SmoI	CTYRAG	2 cut(s)	1504, 1832
SpeI	ACTAGT	1 cut(s)	686
SphI	GCATGC	1 cut(s)	544
Sse8387I	CCTGCAGG	1 cut(s)	1321
SsiI	CCGC	7 cut(s)	5, 8, 39, 74, 695, 1144, 1895
SspMI	CTAG	3 cut(s)	687, 723, 1254
SstI	GAGCTC	1 cut(s)	270
StyD4I	CCNGG	9 cut(s)	372, 1198, 1231, 1243, 1294, 1348, 1349, 1360, 1414
StyI	CCWWGG	4 cut(s)	261, 907, 1253, 1555
TaaI	ACNGT	3 cut(s)	430, 492, 946
TaiI	ACGT	3 cut(s)	102, 1131, 1180
TaqI	TCGA	2 cut(s)	1165, 1505
TatI	WGTACW	2 cut(s)	312, 430
TauI	GCSGC	2 cut(s)	8, 11
TfiI	GAWTC	5 cut(s)	483, 506, 671, 885, 1693
Tru1I	TTAA	3 cut(s)	272, 860, 1478
Tru9I	TTAA	3 cut(s)	272, 860, 1478
TscAI	CASTG	1 cut(s)	1578
TseFI	GTSAC	2 cut(s)	1612, 1765
Tsp45I	GTSAC	2 cut(s)	1612, 1765
TspDTI	ATGAA	5 cut(s)	612, 987, 1104, 1109, 1369
TspMI	CCCGGG	1 cut(s)	1349
TspRI	CASTG	1 cut(s)	1578
Van91I	CCANNNNNTGG	1 cut(s)	1232
VpaK11BI	GGWCC	3 cut(s)	112, 677, 1789
XapI	RAATTY	6 cut(s)	274, 355, 599, 622, 782, 980
XbaI	TCTAGA	1 cut(s)	722
XceI	RCATGY	1 cut(s)	544
XcmI	CCANNNNNNNNNTGG	1 cut(s)	662
XhoI	CTCGAG	1 cut(s)	1504
XmaI	CCCGGG	1 cut(s)	1349
XmaJI	CCTAGG	1 cut(s)	1253
XmiI	GTMKAC	1 cut(s)	843
XspI	CTAG	3 cut(s)	687, 723, 1254
Zsp2I	ATGCAT	1 cut(s)	1485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.