Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012291

Physical Location & Seq

Genomic Coordinates Forward (+)

34852444 .. 34856091

Gene Structure 3648 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24568

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGCGGCGGCGGCGGTGTCGTCTCAGGTGGCTCAACCCGTTGTTCCGGTGACGCAACAATCTCCGGTGTCGGCTCCGGCTCCGGTGGGGTTCGGGAACGTGTCGCTGTACGTGGGCGATCTGGACCCGACTGTGAACGAAGCGCAACTTTACGATCTGTTCAACCAAGTGGCTCAGGTTGCTTCCCTCCGGGTTTGTAGGGATCAGACCCGAATGCACTCGCTTGGCTATGCCTATGTCAATTACGCCACTCCACAGGATGCTGCTAATGCCAAGGAGCTTTTAAATTTTGCTCCTATAAATGGGAAACCCATTAGGATCATGTACTCTCATCGCGATCCCAGCATTCGGAAGAGCGGATATGCAAATTTATTTATCAAGAACCTGGAAAAATCTATTGATAACAAGGCATTGTTGGACACTTTTTCTGCCTTTGGGACCGTACTCTCTTGCAAGGTTGCAGCTGATGCCAGTGGTCAATCAAAAGGATATGGTTTCGTACAGTATGACAATGAGGAATCTGCAAATAATGCAATCAACAAGCTGAATGGCATGCTGATAAATGAGAAACAGGTTTCCGTTGGACCTTATGTTCGACGCCAGAGGTCAAATTCATTTCAAAATATTTATGTGAAAAATTTGTCAGAGACAACTACAGATGAAGACCTTAAGAAACTTTTTGGAAAATCTGGTAACATCACTAGTGCTGCAGTTATGAGGGATAATGGAAAGTCTAGATGCTTTGGCTTTGTTAACTTCGAAAACGCTAAAGACGCTGTTGCTGCAATTGATGAGTTTAATGGGACAACTTTTAATGATAAGGTTTTGTTTGTTGGGAAGGCTCAAAAGAAGATAGAGAGGCAGGCAGAGTTAAGAGCGAAGTTTGAACAGGAAAGAATCAGCAGATTTGAGAAGCTACAAGGTGCTAATTTATATCTGAAAAATCTTGATGACACCATAAATGATGACAAACTAAAGGAGCTATTCTCTGAATTTGGAACAATAACATCATGCAAGGTCATGCTTGATCATCAAGGAATGAGCAAGGGATCTGGATTTGTTGCCTTTTCTACCCCAGAGGAAGCTAACAAAGCTTTGAATGAAATGAATGGGAAGATGATTGGACGGAAGCCTCTATACGTTGCTGTGGCCCAGCGGAAAGAAGAGAGGAAGGCTCGATTACAGGCACGTTTTGCCCAAATCCGAGCACCAAGTGGAATGACACCTTTGCCGTCGGGAATTCCTGGATTTCATCCTGGGGCACCTAGACTCTCCCCTCAGCAGCTGTATTTTGGTCAAGGTACTCCTGGCCTTCTACCGCATCAGCCTGCAGGTTATGGCTTCCAGCAGCAAATCTTGCCTGGGATGCGTCCAGGTGTTGCTCCCAACTTCATTATGCCATATCACCTTCAGAGGCAAGGTCAACCTGGGCAGCGATTTGGTGTACGCCGAGGCGGCAACTTCCAACAAGTGCAGCAGCAGCCGCAGTTAATGCACCGTAACTCCAATCAAGGCTTGAGATACATGGGTAATGCTCGGAACGGAGTTGAGTCTCCTGTGTCTCCCCAAGGTCTTGTGAGTCCAATGATGCCTTTGCCCTTTGACGGTTCAGGTATGCCTGTGACATCAAGTGATATCCAGCGTTCTGGGCCAGTGCCTATGTCAACACTTGCTTCTGCTTTAGCTTCTGCTACTCCCGAGAATCAGCGTTTGATGCTGGGAGAGCAGCTATATCCACTTGTTGAGCGTATTGAGCCAGAACTCACAGCTAAGGTGACTGGGATGTTGCTGGAGATGGACCAGACAGAAGTTCTCCATCTGATCGAGTCTCCAGATGCTCTCAAGGATAAGGTAGCTGAGGCGATGGATGTCCTTCATAAAGCTACATCAAAGACTGATGTCACCGATCAGCTTGGTGCATTGGATCTGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0031323 GO:0031329 GO:0034641 GO:0034645 GO:0034655 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1900151 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903311

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

644

Amino Acids

70.59

Weight (kDa)

9.0

Isoelectric Point (pI)

45.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	36 - 106	3.2e-15	RNA recognition motif
RRM_1	PF00076	124 - 192	4.6e-20	RNA recognition motif
RRM_1	PF00076	209 - 276	3.1e-21	RNA recognition motif
RRM_1	PF00076	311 - 379	9.6e-21	RNA recognition motif
MLLE	PF00658	560 - 625	1.3e-28	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22760 AT1G71770 AT1G71770
fragaria_vesca	FvH4_2g12840
malus_domestica	MD05G1035900.v1.1 MD10G1038000.v1.1
prunus_persica	Prupe.8G043700_v2.0.a1
pyrus_communis	pycom05g02640 pycom10g02600
rosa_chinensis	RchiOBHm_Chr6g0273861
rosa_laevigata	RLG00000013594
rosa_multiflora	Rmu_ssc0000322.1_g000029
rosa_roxburghii	Rroxscaffold_7G00194960
rosa_rugosa	Rorug06G0077500
rosa_samantha	Rh6AG193000 Rh6BG196900 Rh6CG196100 Rh6DG188100
rosa_wichuraiana	Rw6G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1322
AccB1I	GGYRCC	1 cut(s)	1261
AccBSI	CCGCTC	1 cut(s)	357
AccII	CGCG	1 cut(s)	336
AciI	CCGC	9 cut(s)	5, 8, 11, 14, 357, 1156, 1319, 1455, 1484
AclWI	GGATC	5 cut(s)	210, 326, 332, 1057, 1932
AcsI	RAATTY	6 cut(s)	286, 367, 610, 637, 992, 1239
AcuI	CTGAAG	1 cut(s)	1394
AcyI	GRCGYC	1 cut(s)	598
AdeI	CACNNNGTG	1 cut(s)	1214
AfaI	GTAC	6 cut(s)	110, 326, 444, 501, 1303, 1446
AfiI	CCNNNNNNNGG	3 cut(s)	302, 348, 1604
AflII	CTTAAG	1 cut(s)	668
AflIII	ACRYGT	1 cut(s)	99
AgsI	TTSAA	4 cut(s)	163, 620, 887, 1099
AhlI	ACTAGT	1 cut(s)	701
AjnI	CCWGG	7 cut(s)	384, 1243, 1255, 1306, 1360, 1372, 1426
AloI	GAACNNNNNNTCC	2 cut(s)	576, 608
Alw21I	GWGCWC	1 cut(s)	1210
Alw26I	GTCTC	5 cut(s)	27, 641, 1557, 1566, 1833
AlwI	GGATC	5 cut(s)	210, 326, 332, 1057, 1932
AlwNI	CAGNNNCTG	1 cut(s)	1285
Ama87I	CYCGRG	1 cut(s)	1697
AoxI	GGCC	3 cut(s)	1149, 1309, 1649
ApoI	RAATTY	6 cut(s)	286, 367, 610, 637, 992, 1239
ArsI	GACNNNNNNTTYG	2 cut(s)	576, 608
AspLEI	GCGC	1 cut(s)	145
AspS9I	GGNCC	6 cut(s)	124, 438, 584, 1150, 1649, 1798
AsuC2I	CCSGG	1 cut(s)	191
AsuHPI	GGTGA	4 cut(s)	61, 1397, 1786, 1894
AsuII	TTCGAA	1 cut(s)	759
AvaI	CYCGRG	1 cut(s)	1697
AvaII	GGWCC	4 cut(s)	124, 438, 584, 1798
BaeGI	GKGCMC	1 cut(s)	1264
BaeI	ACNNNNGTAYC	2 cut(s)	1513, 1546
BanI	GGYRCC	1 cut(s)	1261
BarI	GAAGNNNNNNTAC	2 cut(s)	1121, 1153
BbsI	GAAGAC	1 cut(s)	669
Bbv12I	GWGCWC	1 cut(s)	1210
BbvCI	CCTCAGC	2 cut(s)	1278, 1857
BccI	CCATC	3 cut(s)	1789, 1824, 1858
BceAI	ACGGC	1 cut(s)	1216
BciT130I	CCWGG	7 cut(s)	386, 1245, 1257, 1308, 1362, 1374, 1428
BclI	TGATCA	1 cut(s)	1027
BcnI	CCSGG	1 cut(s)	191
BcoDI	GTCTC	5 cut(s)	27, 641, 1557, 1566, 1833
BcuI	ACTAGT	1 cut(s)	701
BfaI	CTAG	3 cut(s)	702, 735, 1266
BfmI	CTRYAG	3 cut(s)	654, 708, 1329
BfrI	CTTAAG	1 cut(s)	668
BfuAI	ACCTGC	1 cut(s)	1322
BglI	GCCNNNNNGGC	1 cut(s)	1455
Bme1390I	CCNGG	8 cut(s)	191, 386, 1245, 1257, 1308, 1362, 1374, 1428
Bme18I	GGWCC	4 cut(s)	124, 438, 584, 1798
BmeT110I	CYCGRG	1 cut(s)	1697
BmgT120I	GGNCC	6 cut(s)	124, 438, 584, 1150, 1649, 1798
BmiI	GGNNCC	5 cut(s)	75, 81, 126, 439, 1263
BmrFI	CCNGG	8 cut(s)	191, 386, 1245, 1257, 1308, 1362, 1374, 1428
BmrI	ACTGGG	1 cut(s)	1788
BmsI	GCATC	8 cut(s)	250, 457, 728, 1330, 1356, 1578, 1704, 1825
BmuI	ACTGGG	1 cut(s)	1788
BoxI	GACNNNNGTC	1 cut(s)	1898
BpiI	GAAGAC	1 cut(s)	669
BplI	GAGNNNNNCTC	4 cut(s)	971, 1003, 1159, 1191
BpmI	CTGGAG	2 cut(s)	1811, 1815
Bpu10I	CCTNAGC	4 cut(s)	174, 1278, 1770, 1857
Bpu14I	TTCGAA	1 cut(s)	759
BpuEI	CTTGAG	2 cut(s)	1537, 1826
BpuMI	CCSGG	1 cut(s)	191
BsaAI	YACGTR	1 cut(s)	112
BsaHI	GRCGYC	1 cut(s)	598
BsaJI	CCNNGG	6 cut(s)	273, 1256, 1361, 1427, 1450, 1567
BsaWI	WCCGGW	3 cut(s)	46, 64, 82
BsaXI	ACNNNNNCTCC	2 cut(s)	1487, 1517
Bsc4I	CCNNNNNNNGG	3 cut(s)	302, 348, 1604
Bse1I	ACTGG	3 cut(s)	471, 1652, 1783
BseBI	CCWGG	7 cut(s)	386, 1245, 1257, 1308, 1362, 1374, 1428
BseDI	CCNNGG	6 cut(s)	273, 1256, 1361, 1427, 1450, 1567
BseGI	GGATG	5 cut(s)	265, 1252, 1371, 1788, 1873
BseLI	CCNNNNNNNGG	3 cut(s)	302, 348, 1604
BseMII	CTCAG	4 cut(s)	38, 188, 1292, 1848
BseNI	ACTGG	3 cut(s)	471, 1652, 1783
BseSI	GKGCMC	1 cut(s)	1264
BseYI	CCCAGC	3 cut(s)	341, 1152, 1717
BsgI	GTGCAG	1 cut(s)	1493
Bsh1236I	CGCG	1 cut(s)	336
BshFI	GGCC	3 cut(s)	1151, 1311, 1651
BshNI	GGYRCC	1 cut(s)	1261
BsiHKAI	GWGCWC	1 cut(s)	1210
BsiHKCI	CYCGRG	1 cut(s)	1697
BsiSI	CCGG	5 cut(s)	47, 65, 77, 83, 190
BslFI	GGGAC	2 cut(s)	451, 817
BslI	CCNNNNNNNGG	3 cut(s)	302, 348, 1604
BsmAI	GTCTC	5 cut(s)	27, 641, 1557, 1566, 1833
BsmBI	CGTCTC	1 cut(s)	27
BsmFI	GGGAC	2 cut(s)	451, 817
BsmI	GAATGC	2 cut(s)	219, 345
BsnI	GGCC	3 cut(s)	1151, 1311, 1651
BsoBI	CYCGRG	1 cut(s)	1697
Bsp119I	TTCGAA	1 cut(s)	759
Bsp1286I	GDGCHC	2 cut(s)	1210, 1264
Bsp68I	TCGCGA	1 cut(s)	336
BspACI	CCGC	9 cut(s)	5, 8, 11, 14, 357, 1156, 1319, 1455, 1484
BspANI	GGCC	3 cut(s)	1151, 1311, 1651
BspCNI	CTCAG	4 cut(s)	37, 187, 1291, 1849
BspFNI	CGCG	1 cut(s)	336
BspLI	GGNNCC	5 cut(s)	75, 81, 126, 439, 1263
BspMAI	CTGCAG	2 cut(s)	712, 1333
BspMI	ACCTGC	1 cut(s)	1322
BspPI	GGATC	5 cut(s)	210, 326, 332, 1057, 1932
BspQI	GCTCTTC	1 cut(s)	347
BspT104I	TTCGAA	1 cut(s)	759
BspT107I	GGYRCC	1 cut(s)	1261
BspTI	CTTAAG	1 cut(s)	668
BsrBI	CCGCTC	1 cut(s)	357
BsrI	ACTGG	3 cut(s)	471, 1652, 1783
BssECI	CCNNGG	6 cut(s)	273, 1256, 1361, 1427, 1450, 1567
BssNI	GRCGYC	1 cut(s)	598
BssT1I	CCWWGG	2 cut(s)	273, 1567
Bst2UI	CCWGG	7 cut(s)	386, 1245, 1257, 1308, 1362, 1374, 1428
Bst4CI	ACNGT	5 cut(s)	133, 442, 504, 1499, 1607
Bst6I	CTCTTC	2 cut(s)	347, 1158
BstACI	GRCGYC	1 cut(s)	598
BstAFI	CTTAAG	1 cut(s)	668
BstAPI	GCANNNNNTGC	5 cut(s)	467, 530, 1193, 1357, 1492
BstBAI	YACGTR	1 cut(s)	112
BstBI	TTCGAA	1 cut(s)	759
BstC8I	GCNNGC	3 cut(s)	554, 864, 1329
BstDEI	CTNAG	5 cut(s)	24, 174, 1278, 1770, 1857
BstF5I	GGATG	5 cut(s)	265, 1252, 1371, 1788, 1873
BstFNI	CGCG	1 cut(s)	336
BstHHI	GCGC	1 cut(s)	145
BstMAI	GTCTC	5 cut(s)	27, 641, 1557, 1566, 1833
BstNI	CCWGG	7 cut(s)	386, 1245, 1257, 1308, 1362, 1374, 1428
BstNSI	RCATGY	1 cut(s)	556
BstPAI	GACNNNNGTC	1 cut(s)	1898
BstSCI	CCNGG	8 cut(s)	189, 384, 1243, 1255, 1306, 1360, 1372, 1426
BstSFI	CTRYAG	3 cut(s)	654, 708, 1329
BstSLI	GKGCMC	1 cut(s)	1264
BstUI	CGCG	1 cut(s)	336
BstV2I	GAAGAC	1 cut(s)	669
BstX2I	RGATCY	2 cut(s)	1049, 1924
BstXI	CCANNNNNNTGG	1 cut(s)	1646
BstYI	RGATCY	2 cut(s)	1049, 1924
BsuRI	GGCC	3 cut(s)	1151, 1311, 1651
BtgZI	GCGATG	2 cut(s)	317, 1877
BtsCI	GGATG	5 cut(s)	265, 1252, 1371, 1788, 1873
BtsIMutI	CAGTG	2 cut(s)	478, 1659
BtuMI	TCGCGA	1 cut(s)	336
BveI	ACCTGC	1 cut(s)	1322
Cac8I	GCNNGC	3 cut(s)	554, 864, 1329
CaiI	CAGNNNCTG	1 cut(s)	1285
CfoI	GCGC	1 cut(s)	145
Cfr13I	GGNCC	6 cut(s)	124, 438, 584, 1150, 1649, 1798
CseI	GACGC	4 cut(s)	61, 606, 782, 1358
Csp6I	GTAC	6 cut(s)	109, 325, 443, 500, 1302, 1445
CviAII	CATG	5 cut(s)	322, 553, 1011, 1021, 1525
CviQI	GTAC	6 cut(s)	109, 325, 443, 500, 1302, 1445
DdeI	CTNAG	5 cut(s)	24, 174, 1278, 1770, 1857
DraI	TTTAAA	1 cut(s)	285
DraIII	CACNNNGTG	1 cut(s)	1214
Eam1104I	CTCTTC	2 cut(s)	347, 1158
EarI	CTCTTC	2 cut(s)	347, 1158
Eco130I	CCWWGG	2 cut(s)	273, 1567
Eco32I	GATATC	1 cut(s)	1636
Eco47I	GGWCC	4 cut(s)	124, 438, 584, 1798
Eco57I	CTGAAG	1 cut(s)	1394
Eco88I	CYCGRG	1 cut(s)	1697
EcoRI	GAATTC	1 cut(s)	1239
EcoRII	CCWGG	7 cut(s)	384, 1243, 1255, 1306, 1360, 1372, 1426
EcoRV	GATATC	1 cut(s)	1636
EcoT14I	CCWWGG	2 cut(s)	273, 1567
ErhI	CCWWGG	2 cut(s)	273, 1567
Esp3I	CGTCTC	1 cut(s)	27
FaeI	CATG	5 cut(s)	325, 556, 1014, 1024, 1528
FalI	AAGNNNNNCTT	2 cut(s)	132, 164
FaqI	GGGAC	2 cut(s)	451, 817
FatI	CATG	5 cut(s)	321, 552, 1010, 1020, 1524
FbaI	TGATCA	1 cut(s)	1027
FokI	GGATG	5 cut(s)	272, 1239, 1378, 1795, 1880
FspBI	CTAG	3 cut(s)	702, 735, 1266
GlaI	GCGC	1 cut(s)	144
GsaI	CCCAGC	3 cut(s)	345, 1156, 1721
GsuI	CTGGAG	2 cut(s)	1811, 1815
HaeIII	GGCC	3 cut(s)	1151, 1311, 1651
HapII	CCGG	5 cut(s)	47, 65, 77, 83, 190
HgaI	GACGC	4 cut(s)	61, 606, 782, 1358
HhaI	GCGC	1 cut(s)	145
Hin1I	GRCGYC	1 cut(s)	598
Hin1II	CATG	5 cut(s)	325, 556, 1014, 1024, 1528
Hin6I	GCGC	1 cut(s)	143
HinP1I	GCGC	1 cut(s)	143
HincII	GTYRAC	3 cut(s)	754, 1424, 1665
HindII	GTYRAC	3 cut(s)	754, 1424, 1665
HindIII	AAGCTT	1 cut(s)	1092
HinfI	GANTC	7 cut(s)	518, 897, 1269, 1550, 1579, 1702, 1826
HpaI	GTTAAC	1 cut(s)	754
HpaII	CCGG	5 cut(s)	47, 65, 77, 83, 190
HphI	GGTGA	4 cut(s)	61, 1397, 1786, 1894
Hpy166II	GTNNAC	5 cut(s)	136, 754, 1424, 1445, 1665
Hpy8I	GTNNAC	5 cut(s)	136, 754, 1424, 1445, 1665
Hpy99I	CGWCG	2 cut(s)	600, 1237
HpyAV	CCTTC	5 cut(s)	832, 1165, 1322, 1418, 1883
HpyCH4III	ACNGT	5 cut(s)	133, 442, 504, 1499, 1607
HpyCH4IV	ACGT	4 cut(s)	99, 111, 1140, 1189
HpyF3I	CTNAG	5 cut(s)	24, 174, 1278, 1770, 1857
HpySE526I	ACGT	4 cut(s)	99, 111, 1140, 1189
Hsp92I	GRCGYC	1 cut(s)	598
Hsp92II	CATG	5 cut(s)	325, 556, 1014, 1024, 1528
HspAI	GCGC	1 cut(s)	143
Ksp22I	TGATCA	1 cut(s)	1027
KspAI	GTTAAC	1 cut(s)	754
LguI	GCTCTTC	1 cut(s)	347
LmnI	GCTCC	6 cut(s)	79, 85, 277, 298, 979, 1387
LweI	GCATC	8 cut(s)	250, 457, 728, 1330, 1356, 1578, 1704, 1825
MaeI	CTAG	3 cut(s)	702, 735, 1266
MaeII	ACGT	4 cut(s)	99, 111, 1140, 1189
MaeIII	GTNAC	6 cut(s)	49, 692, 1499, 1621, 1774, 1900
MbiI	CCGCTC	1 cut(s)	357
MboII	GAAGA	5 cut(s)	364, 674, 862, 1126, 1175
MfeI	CAATTG	1 cut(s)	786
MflI	RGATCY	2 cut(s)	1049, 1924
MhlI	GDGCHC	2 cut(s)	1210, 1264
MlyI	GAGTC	4 cut(s)	1263, 1559, 1588, 1835
MmeI	TCCRAC	3 cut(s)	396, 562, 1489
MseI	TTAA	7 cut(s)	284, 669, 753, 798, 813, 872, 1490
MspA1I	CMGCKG	3 cut(s)	464, 1156, 1285
MspCI	CTTAAG	1 cut(s)	668
MspI	CCGG	5 cut(s)	47, 65, 77, 83, 190
MspR9I	CCNGG	8 cut(s)	191, 386, 1245, 1257, 1308, 1362, 1374, 1428
MunI	CAATTG	1 cut(s)	786
Mva1269I	GAATGC	2 cut(s)	219, 345
MvaI	CCWGG	7 cut(s)	386, 1245, 1257, 1308, 1362, 1374, 1428
MvnI	CGCG	1 cut(s)	336
NciI	CCSGG	1 cut(s)	191
NlaIII	CATG	5 cut(s)	325, 556, 1014, 1024, 1528
NlaIV	GGNNCC	5 cut(s)	75, 81, 126, 439, 1263
NmeAIII	GCCGAG	1 cut(s)	1475
NmuCI	GTSAC	4 cut(s)	49, 1621, 1774, 1900
NruI	TCGCGA	1 cut(s)	336
NspI	RCATGY	1 cut(s)	556
NspV	TTCGAA	1 cut(s)	759
PaeI	GCATGC	1 cut(s)	556
PciSI	GCTCTTC	1 cut(s)	347
PctI	GAATGC	2 cut(s)	219, 345
PfeI	GAWTC	3 cut(s)	518, 897, 1702
PfoI	TCCNGGA	1 cut(s)	1243
PleI	GAGTC	4 cut(s)	1263, 1558, 1587, 1834
PpsI	GAGTC	4 cut(s)	1263, 1558, 1587, 1834
Ppu21I	YACGTR	1 cut(s)	112
PshAI	GACNNNNGTC	1 cut(s)	1898
Psp6I	CCWGG	7 cut(s)	384, 1243, 1255, 1306, 1360, 1372, 1426
PspFI	CCCAGC	3 cut(s)	341, 1152, 1717
PspGI	CCWGG	7 cut(s)	384, 1243, 1255, 1306, 1360, 1372, 1426
PspN4I	GGNNCC	5 cut(s)	75, 81, 126, 439, 1263
PspPI	GGNCC	6 cut(s)	124, 438, 584, 1150, 1649, 1798
PstI	CTGCAG	2 cut(s)	712, 1333
PstNI	CAGNNNCTG	1 cut(s)	1285
PsuI	RGATCY	2 cut(s)	1049, 1924
PvuII	CAGCTG	2 cut(s)	464, 1285
RruI	TCGCGA	1 cut(s)	336
RsaI	GTAC	6 cut(s)	110, 326, 444, 501, 1303, 1446
RsaNI	GTAC	6 cut(s)	109, 325, 443, 500, 1302, 1445
SapI	GCTCTTC	1 cut(s)	347
SaqAI	TTAA	7 cut(s)	284, 669, 753, 798, 813, 872, 1490
Sau96I	GGNCC	6 cut(s)	124, 438, 584, 1150, 1649, 1798
SbfI	CCTGCAGG	1 cut(s)	1333
SchI	GAGTC	4 cut(s)	1263, 1559, 1588, 1835
ScrFI	CCNGG	8 cut(s)	191, 386, 1245, 1257, 1308, 1362, 1374, 1428
SdaI	CCTGCAGG	1 cut(s)	1333
SduI	GDGCHC	2 cut(s)	1210, 1264
SfaNI	GCATC	8 cut(s)	250, 457, 728, 1330, 1356, 1578, 1704, 1825
SfcI	CTRYAG	3 cut(s)	654, 708, 1329
SfuI	TTCGAA	1 cut(s)	759
SinI	GGWCC	4 cut(s)	124, 438, 584, 1798
SmlI	CTYRAG	3 cut(s)	668, 1516, 1841
SmoI	CTYRAG	3 cut(s)	668, 1516, 1841
SpeI	ACTAGT	1 cut(s)	701
SphI	GCATGC	1 cut(s)	556
Sse8387I	CCTGCAGG	1 cut(s)	1333
SsiI	CCGC	9 cut(s)	5, 8, 11, 14, 357, 1156, 1319, 1455, 1484
SspI	AATATT	1 cut(s)	625
SspMI	CTAG	3 cut(s)	702, 735, 1266
StyD4I	CCNGG	8 cut(s)	189, 384, 1243, 1255, 1306, 1360, 1372, 1426
StyI	CCWWGG	2 cut(s)	273, 1567
TaaI	ACNGT	5 cut(s)	133, 442, 504, 1499, 1607
TaiI	ACGT	4 cut(s)	102, 114, 1143, 1192
TaqI	TCGA	4 cut(s)	595, 759, 1177, 1824
TatI	WGTACW	1 cut(s)	324
TauI	GCSGC	5 cut(s)	8, 11, 14, 1458, 1486
TfiI	GAWTC	3 cut(s)	518, 897, 1702
Tru1I	TTAA	7 cut(s)	284, 669, 753, 798, 813, 872, 1490
Tru9I	TTAA	7 cut(s)	284, 669, 753, 798, 813, 872, 1490
TscAI	CASTG	2 cut(s)	478, 1659
TseFI	GTSAC	4 cut(s)	49, 1621, 1774, 1900
Tsp45I	GTSAC	4 cut(s)	49, 1621, 1774, 1900
TspDTI	ATGAA	7 cut(s)	603, 675, 1116, 1121, 1241, 1381, 1865
TspGWI	ACGGA	3 cut(s)	568, 1141, 1557
TspRI	CASTG	2 cut(s)	478, 1659
Vha464I	CTTAAG	1 cut(s)	668
VpaK11BI	GGWCC	4 cut(s)	124, 438, 584, 1798
XapI	RAATTY	6 cut(s)	286, 367, 610, 637, 992, 1239
XbaI	TCTAGA	1 cut(s)	734
XceI	RCATGY	1 cut(s)	556
XspI	CTAG	3 cut(s)	702, 735, 1266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.